HHsearch alignment for GI: 254780439 and conserved domain: PRK12815
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=100.00 E-value=0 Score=1004.81 Aligned_cols=388 Identities=35% Similarity=0.574 Sum_probs=371.7
Q ss_pred CCCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCC
Q ss_conf 77741899727630201476653189999999996598069960686521123245863798416788999999874856
Q gi|254780439|r 616 SDRKKIVILGGGPNRIGQGIEFDYCCCHASFSLKEAGFETIMINCNPETVSTDYDIADRLYFESLTEEDILEILRVEQQK 695 (1162)
Q Consensus 616 ~~~kkviVlGsGp~RIGqgiEFDy~~v~a~~aLr~~G~~tImIN~NPETVSTDyd~sDrLYFEplt~E~V~~I~~~E~p~ 695 (1162)
T Consensus 5 ~dikkvLiiGsGpi~IGqa~EfDysg~qA~~aLkeeG~~vvlvN~NPaTi~TD~~~ad~vY~ePlt~e~v~~Ii~~E~Pd 84 (1068)
T PRK12815 5 TDIKKILVIGSGPIIIGQAAEFDYSGTQACKALKEEGYQVVLVNPNPATIMTDPEPADTVYFEPLTLEFVKRIIRREKPD 84 (1068)
T ss_pred CCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCC
T ss_conf 77888999898815312344656569999999998699899988983262089874443788589899999999974999
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC------CEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 78227998445124668988888759------838612752033102867899988870986685421121566555655
Q gi|254780439|r 696 GELVGIIVQFGGQTPLKLSKILEKNQ------IPILGTQPDSIDLAEDRDRFQKLLMELDLNQPRNGISHSVEHARLIAC 769 (1162)
Q Consensus 696 g~~~~vi~q~gGqt~~~la~~L~~~g------v~ilGts~~~Id~aEDR~~F~~ll~~l~i~~p~~~~a~s~eea~~~a~ 769 (1162)
T Consensus 85 ~----il~~~GGqtaLnla~~L~~~GiL~k~~v~llGt~~~~I~~aedR~~f~~~m~~ig~~~~~s~~~~s~~ea~~~a~ 160 (1068)
T PRK12815 85 A----LLATLGGQTALNLAVKLLEAGILEQYGVELLGTNVEAIQKGEDRERFRALMKELGEPVPESEIVDSEEEALRFAE 160 (1068)
T ss_pred E----EEECCCCHHHHHHHHHHHHCCCHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHH
T ss_conf 8----986777847999999999759778659649679999998645999999999976999997052199999999998
Q ss_pred HCCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEE
Q ss_conf 36971675134444565412554899999999975210132211112233333333455777745670220120100101
Q gi|254780439|r 770 EIGFPLLIRPSYVLGGRAMQIVYSENMLQDYLLDTLPGLVSEEIKRQYPNDKTGQINTLLGTHPLLFDSYLSDAMEIDVD 849 (1162)
Q Consensus 770 ~iGyPVLVRPSyVLGG~~M~Iv~~~~eL~~yl~~a~~~~~~~~~~~~~~~~~~~~~~~vs~~~pVlIdkfl~~a~EiEVD 849 (1162)
T Consensus 161 ~ig~PvivRps~~lGg~g~~i~~n~~eL~~~~~~~~~---------------------~S~~~~vlie~sl~gwkEie~e 219 (1068)
T PRK12815 161 KIGFPIIVRPAYTLGGDGGGIAENEEELEQLARQGLQ---------------------ASPIHQCLLEESIAGWKEIEYE 219 (1068)
T ss_pred HCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHHHH---------------------HCCCCCEEEEHHCCCCEEEEEE
T ss_conf 6699899983610668965044599999999999996---------------------3999857865011797699999
Q ss_pred EEEECC-CEEEEEEECCCCHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC--CCEEEEEEE
Q ss_conf 023079-84999852011021524576279816866899999999999999987413357624788512--885999852
Q gi|254780439|r 850 ALCQND-QVIVVGIIEHIEEAGIHSGDSACSLPSRSLSQQLKDELISQTKALAGALNVIGLINVQYAIK--DGKIYILEV 926 (1162)
Q Consensus 850 ai~Dg~-~v~I~gimEHiE~aGVHSGDS~~v~PpqsLs~~~~~~i~~~t~~ia~~L~v~G~~NIQfa~k--d~~iYVIEv 926 (1162)
T Consensus 220 v~RD~~~n~i~vc~mEnidP~GIHTGDSi~vaP~qTL~d~e~q~lR~~a~~I~~~lgv~G~~NiQFAv~p~~~~~~VIEv 299 (1068)
T PRK12815 220 VMRDRNDNCVTVCNMENIDPVGVHTGDSIVVAPSQTLTDDEYQMLRSASLKIIRALGVVGGCNIQFALDPRSKQYYVIEV 299 (1068)
T ss_pred EEEECCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCEECCEEEEEEECCCCCCEEEEEC
T ss_conf 99988989799854123544543567745345781269999999999999999972801010579988699982899964
Q ss_pred CCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC---CCCCCEEEEEEECCCHHHCCCCCCCCCCCCCCC
Q ss_conf 44445630456777398899999999859721002466667777---666873899720388344599986707756310
Q gi|254780439|r 927 NPRASRTVPFIAKAIGFPVAKVAARIIAGESLDASIAAYGKRPD---LSQIKHFAVKESVFPFNKFPGVDILLGPEMRST 1003 (1162)
Q Consensus 927 NpRaSRtvPfvSKatG~pl~~iAt~v~lG~~L~~~~~~~~~~~~---~~~~~~~aVK~pvFsF~k~~g~D~~LGpEMkST 1003 (1162)
T Consensus 300 NPR~SRssalaSKATGyPiAkvaaklalG~~L~ei~n~iTg~t~A~fEP~lDyvvvK~P~~~F~kf~~~d~~Lgt~Mks~ 379 (1068)
T PRK12815 300 NPRVSRSSALASKATGYPIAKIAAKLAVGYTLDEIKNPLTGLTYASFEPTLDYVVVKFPRWPFDKFGYADRTLGTQMKAT 379 (1068)
T ss_pred CCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 78622024788875088489999998638877770664137730333775776999740566444678875447512333
Q ss_pred EEEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 1377741999999999999838879
Q gi|254780439|r 1004 GEVIGIDQDFPLAFAKSQLGIGVDL 1028 (1162)
Q Consensus 1004 GEVmgig~~~~eA~~Ka~~a~g~~l 1028 (1162)
T Consensus 380 Gevm~igr~f~eA~~KAlrsle~~~ 404 (1068)
T PRK12815 380 GEVMAIGRNFESAFQKALRSLEIKR 404 (1068)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 2220030028999999998633576