HHsearch alignment for GI: 254780439 and conserved domain: TIGR03201
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.28 E-value=0.1 Score=31.32 Aligned_cols=41 Identities=20% Similarity=0.408 Sum_probs=29.0
Q ss_pred CCCCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf 6777418997276302014766531899999999965980699606865211
Q gi|254780439|r 615 VSDRKKIVILGGGPNRIGQGIEFDYCCCHASFSLKEAGFETIMINCNPETVS 666 (1162)
Q Consensus 615 ~~~~kkviVlGsGp~RIGqgiEFDy~~v~a~~aLr~~G~~tImIN~NPETVS 666 (1162)
T Consensus 164 v~~g~~V~V~G~G~i--G---------l~a~~~ak~~Ga~Vi~vd~~~~rle 204 (349)
T TIGR03201 164 LKKGDLVIVIGAGGV--G---------GYMVQTAKAMGAAVVAIDIDPEKLE 204 (349)
T ss_pred CCCCCEEEEECCCHH--H---------HHHHHHHHHCCCEEEEEECCHHHHH
T ss_conf 899988999897489--9---------9999999985997999949999999