HHsearch alignment for GI: 254780439 and conserved domain: pfam06849
>pfam06849 DUF1246 Protein of unknown function (DUF1246). This family represents the N-terminus of a number of hypothetical archaeal proteins of unknown function.
Probab=96.03 E-value=0.027 Score=35.98 Aligned_cols=112 Identities=18% Similarity=0.233 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCC-CEEECCCCCCCCEEECCCCHHHHHHHH--HHHCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 888999999998797899974876-501078451310043379999999999--86289889975887026888899887
Q gi|254780439|r 28 YSGTQACKALKEEGYRIILVNSNP-ATIMTDPDLADATYTEPITPEVVAKII--EKERPDAILPTTGGQTALNTALSLKR 104 (1162)
Q Consensus 28 ys~~qa~~alke~Gi~vVlVNsNp-aTi~TD~~~aD~vY~ePlt~e~v~~Ii--~~E~pDaIlp~~GGqtalnl~~~L~e 104 (1162)
T Consensus 7 HSALqIl~GAK~EGF~Tv~vc~~gr~~~Y~~f~~~De~iv~d~f~di~~~~~q~~L~~~N~I~IPhgSfv~-----Y~G~ 81 (124)
T pfam06849 7 HSALQILDGAKDEGFRTVAVCQKGREKFYRRFPFVDEFIVVDKFKDILDEEVQQKLRENNAIFIPHGSFVA-----YVGY 81 (124)
T ss_pred CHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCEEE-----EECH
T ss_conf 03989972388739957899817975213326867379995658998729999999988979974888467-----6558
Q ss_pred CCCHHHHCCEEECCCHHHHHHHC-CHHHHHHHHHHCCCCCCCC
Q ss_conf 59628828757149989998605-8899999999878988862
Q gi|254780439|r 105 MGVLDRYGVEMIGAKPETIDKAE-DRSLFSKAMQNIPLATPKS 146 (1162)
Q Consensus 105 ~gil~~~~v~~lG~~~~~I~~~e-dR~~F~~~l~~~gip~~~s 146 (1162)
T Consensus 82 ~~ie~~~~VP~FGNR--~lLrwEseR~~~~~lLe~Agi~~Pk~ 122 (124)
T pfam06849 82 DRVENEFKVPIFGNR--NLLRWESERDKERKLLEKAGIRYPKK 122 (124)
T ss_pred HHHHHCCCCCEECCH--HHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 998602788700478--88887653677999999769999835