RPSBLAST alignment of GI: 254780440 and protein with PDBid: 3bmb

>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli} Length = 136
 Score =  111 bits (280), Expect = 5e-26
 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 9/133 (6%)

Query: 26  ERPRIIKAISEARAYGDLSENAEYQAAKELQNLNEGRMAELENIITRAEVIDISTMSGDR 85
            RP II    +A     L E   Y                L   + RA++     M  D 
Sbjct: 2   SRPTIIINDLDAERIDILLEQPAYAGLPIAD--------ALNAELDRAQMCSPEEMPHDV 53

Query: 86  IAFGATVSLVEKNSGDKKNYQIVGDQEADVQSGLVSISSPIARALIGKELGDIISVNAPG 145
           +   + V     + G+ +   +V   +    +  +S+ +P+  AL+G  +GD I    PG
Sbjct: 54  VTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPG 113

Query: 146 G-EKTYEILQVLW 157
           G     E+L++ +
Sbjct: 114 GVATHLEVLELEY 126