HHsearch alignment for GI: 254780442 and conserved domain: TIGR01588
>TIGR01588 citE citrate lyase, beta subunit; InterPro: IPR006475 This group of sequences represent the beta subunit of the holoenzyme citrate lyase (4.1.3.6 from EC) composed of alpha (2.8.3.10 from EC), beta, and acyl carrier protein subunits in a stoichiometric relationship of 6:6:6. Citrate lyase is an enzyme which converts citrate to oxaloacetate. In bacteria, this reaction is involved in citrate fermentation. The beta subunit catalyzes the reaction (3S)-citryl-CoA = acetyl-CoA + oxaloacetate. The group contains an experimentally characterised member from Leuconostoc mesenteroides . The group contains sequences from a wide range of Gram-positive bacteria. For Gram-negative bacteria, it appears that only the sequences from gamma proteobacteria are present.; GO: 0008816 citryl-CoA lyase activity, 0006084 acetyl-CoA metabolic process, 0005737 cytoplasm, 0009346 citrate lyase complex.
Probab=96.17 E-value=0.016 Score=38.25 Aligned_cols=152 Identities=23% Similarity=0.241 Sum_probs=119.1
Q ss_pred CHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHHHEEE--
Q ss_conf 6556778998873488532505855773479999986200---------34335553278566311788875331247--
Q gi|254780442|r 172 TQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQ---------NKIGLMSKIEKPRAIEYASEIIQLSDAVM-- 240 (480)
Q Consensus 172 tekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~---------~~~~IiaKIE~~~al~nl~eI~~~sDgim-- 240 (480)
T Consensus 71 tpFG~~Dl~AvVkA-gvdvvRLPKtdt~~~i~~le~~i~~iE~E~Gr~vG~T~lMAAIESAlGv~Na~EIA~AS~RL~GI 149 (288)
T TIGR01588 71 TPFGLEDLKAVVKA-GVDVVRLPKTDTAEDIHELEKLIEEIEKEIGREVGETKLMAAIESALGVVNAVEIARASKRLMGI 149 (288)
T ss_pred CHHHHHHHHHHHHC-CCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHCCCHHHHHH
T ss_conf 85458889988753-88656668989988999999899999986088857615888998863304578884313789998
Q ss_pred -EECC----CCCHHCC--HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf -5222----2002158--76736899999999851398399805767888828898403477899998519968998144
Q gi|254780442|r 241 -VARG----DLGVEMA--LELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAE 313 (480)
Q Consensus 241 -iaRG----DLg~e~~--~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~E 313 (480)
T Consensus 150 AL~AeDYvtdmkT~R~p~G~ELfyAR~~i~lAAR~AgI~AFD---tVysdvNneeGF~~E~~Lik~LGFDGKSLi----- 221 (288)
T TIGR01588 150 ALGAEDYVTDMKTSRSPDGTELFYAREAILLAARAAGIAAFD---TVYSDVNNEEGFLKEAQLIKQLGFDGKSLI----- 221 (288)
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE---EEEECCCCHHHHHHHHHHHHHCCCCCCCCC-----
T ss_conf 830554432277667876328999999999998652614544---554047662357999999986389873125-----
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCH
Q ss_conf 4354465899999999887630101
Q gi|254780442|r 314 TASGSYPVDAVRTMSLVASSAERDS 338 (480)
Q Consensus 314 Ta~G~yP~~~v~~~~~i~~~~E~~~ 338 (480)
T Consensus 222 -----nPrQi-~llh~vY~PT~KEi 240 (288)
T TIGR01588 222 -----NPRQI-ELLHKVYAPTEKEI 240 (288)
T ss_pred -----CHHHH-HHHHHHCCCCHHHH
T ss_conf -----62678-87653148857788