HHsearch alignment for GI: 254780442 and conserved domain: cd02911
>cd02911 arch_FMN Archeal FMN-binding domain. This family of archaeal proteins are part of the NAD(P)H-dependent flavin oxidoreductase (oxidored) FMN-binding family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN. The specific function of this group is unknown.
Probab=92.68 E-value=0.35 Score=28.43 Aligned_cols=68 Identities=19% Similarity=0.212 Sum_probs=46.5
Q ss_pred HHHHHHCCCCCEECCC--CCCCCHHHHHHHHHHHCCCCEEEEE--ECCHHHHHHHHHHHHHHHEEEEECCCCCHHC
Q ss_conf 9988734885325058--5577347999998620034335553--2785663117888753312475222200215
Q gi|254780442|r 179 LHAALQTCEVDWVALS--FIQSADDLLEIRKIISQNKIGLMSK--IEKPRAIEYASEIIQLSDAVMVARGDLGVEM 250 (480)
Q Consensus 179 i~~a~~~~~vD~ialS--fVr~~~di~~~r~~l~~~~~~IiaK--IE~~~al~nl~eI~~~sDgimiaRGDLg~e~ 250 (480)
T Consensus 157 ~a~~~e~aG~~~l~v~~~~~~~~ad~~~I~~~~--~~i~VigNGDI~s~eda~~~~~--~G~DgVMIgRgAL~n~~ 228 (233)
T cd02911 157 LARLIEKAGADIIHVDAMDPGNHADLKKIRDIS--TELFIIGNNSVTTIESAKEMFS--YGADMVSVARASLPENI 228 (233)
T ss_pred HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHC--CCCEEEEECCCCCHHHHHHHHH--HCCCEEEECHHHCCCCC
T ss_conf 999999839607994320778508999999863--7987998089699999999998--59999997387556852