Query gi|254780442|ref|YP_003064855.1| pyruvate kinase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 480
No_of_seqs 171 out of 2497
Neff 6.5
Searched_HMMs 23785
Date Mon May 30 11:32:24 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780442.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2e28_A Pyruvate kinase, PK; al 100.0 0 0 1181.8 48.5 475 5-480 3-482 (587)
2 3gr4_A Pyruvate kinase isozyme 100.0 0 0 1137.9 50.4 469 3-473 60-550 (550)
3 3ma8_A Pyruvate kinase; parasi 100.0 0 0 1138.5 46.0 470 3-473 50-534 (534)
4 3gg8_A Pyruvate kinase; malari 100.0 0 0 1119.1 49.9 469 3-472 34-510 (511)
5 1e0t_A Pyruvate kinase, PK; ph 100.0 0 0 1120.5 48.6 465 4-472 1-470 (470)
6 3khd_A Pyruvate kinase; malari 100.0 0 0 1122.0 46.6 470 2-472 43-519 (520)
7 3hqn_D Pyruvate kinase, PK; TI 100.0 0 0 1117.2 49.4 469 2-472 17-498 (499)
8 1a3w_A Pyruvate kinase; allost 100.0 0 0 1108.3 43.5 469 2-472 16-500 (500)
9 1izc_A Macrophomate synthase i 98.9 8.7E-09 3.7E-13 82.9 10.9 143 175-332 106-296 (339)
10 2v5j_A 2,4-dihydroxyhept-2-ENE 98.8 8.7E-08 3.6E-12 75.5 10.6 126 174-314 99-261 (287)
11 2vws_A YFAU, 2-keto-3-deoxy su 98.7 1E-07 4.4E-12 74.9 10.7 126 175-315 79-241 (267)
12 1dxe_A 2-dehydro-3-deoxy-galac 98.7 2.1E-07 9E-12 72.7 10.9 126 175-315 80-241 (256)
13 1sgj_A Citrate lyase, beta sub 97.7 0.00015 6.4E-09 51.6 8.1 137 172-323 80-226 (284)
14 1u5h_A CITE; TIM barrel, struc 97.4 0.00063 2.6E-08 47.1 7.9 138 172-330 70-220 (273)
15 3cux_A Malate synthase; TIM ba 97.0 0.012 5E-07 37.7 11.0 133 184-323 200-369 (528)
16 3khj_A Inosine-5-monophosphate 97.0 0.013 5.5E-07 37.3 10.9 122 172-311 103-236 (361)
17 2wqd_A Phosphoenolpyruvate-pro 96.9 0.0085 3.6E-07 38.7 9.4 140 176-336 376-544 (572)
18 2ols_A Phosphoenolpyruvate syn 96.8 0.02 8.3E-07 36.0 10.9 33 233-277 406-438 (794)
19 3ffs_A Inosine-5-monophosphate 96.8 0.014 5.7E-07 37.2 9.7 118 179-311 149-275 (400)
20 2bg5_A Enzyme I, phosphoenolpy 96.8 0.0088 3.7E-07 38.6 8.7 149 167-336 116-293 (324)
21 2hwg_A Phosphoenolpyruvate-pro 96.6 0.016 6.8E-07 36.7 9.0 126 174-311 372-526 (575)
22 2qr6_A IMP dehydrogenase/GMP r 96.5 0.021 8.9E-07 35.8 9.0 103 195-311 193-306 (393)
23 1kbl_A PPDK, pyruvate phosphat 96.1 0.088 3.7E-06 31.2 11.2 112 190-312 701-855 (873)
24 3igs_A N-acetylmannosamine-6-p 95.9 0.072 3E-06 31.9 9.2 134 177-332 92-228 (232)
25 1eep_A Inosine 5'-monophosphat 95.7 0.13 5.5E-06 29.9 11.4 124 173-311 152-285 (404)
26 3cuz_A MSA, malate synthase A; 95.6 0.054 2.3E-06 32.8 7.7 120 184-311 203-366 (532)
27 1zfj_A Inosine monophosphate d 95.4 0.16 6.8E-06 29.3 12.0 125 173-312 232-366 (491)
28 1t57_A Conserved protein MTH16 95.2 0.18 7.6E-06 28.9 12.1 105 353-459 33-177 (206)
29 1vbg_A Pyruvate,orthophosphate 94.9 0.16 6.9E-06 29.2 8.5 51 191-241 708-770 (876)
30 1jcn_A Inosine monophosphate d 94.9 0.23 9.6E-06 28.1 12.7 123 172-312 253-388 (514)
31 1vrd_A Inosine-5'-monophosphat 94.7 0.25 1.1E-05 27.9 11.6 125 172-311 235-369 (494)
32 3glc_A Aldolase LSRF; TIM barr 94.2 0.32 1.4E-05 27.1 8.7 209 203-434 42-273 (295)
33 1h6z_A Pyruvate phosphate diki 93.8 0.21 8.7E-06 28.5 6.9 31 213-245 559-589 (913)
34 2cu0_A Inosine-5'-monophosphat 93.3 0.44 1.9E-05 26.0 10.2 124 171-311 225-357 (486)
35 1ypf_A GMP reductase; GUAC, pu 93.0 0.49 2.1E-05 25.7 11.1 123 171-312 103-240 (336)
36 2qjg_A Putative aldolase MJ040 93.0 0.49 2.1E-05 25.7 9.0 193 224-436 42-255 (273)
37 1vp8_A Hypothetical protein AF 93.0 0.49 2.1E-05 25.7 13.8 105 353-459 25-170 (201)
38 2c6q_A GMP reductase 2; TIM ba 91.4 0.74 3.1E-05 24.4 12.7 129 170-312 114-253 (351)
39 3cwc_A Putative glycerate kina 91.0 0.5 2.1E-05 25.7 6.0 61 213-276 265-325 (383)
40 1jcn_A Inosine monophosphate d 91.0 0.46 1.9E-05 25.9 5.7 35 19-56 75-110 (514)
41 1w8s_A FBP aldolase, fructose- 89.7 1 4.3E-05 23.3 11.2 179 235-434 54-247 (263)
42 3ivs_A Homocitrate synthase, m 89.3 1.1 4.6E-05 23.1 15.7 156 170-334 57-222 (423)
43 3kts_A Glycerol uptake operon 88.7 0.86 3.6E-05 23.9 5.7 70 174-245 17-92 (192)
44 1me8_A Inosine-5'-monophosphat 87.7 1 4.2E-05 23.4 5.5 117 177-311 245-381 (503)
45 2gjl_A Hypothetical protein PA 87.0 1.5 6.3E-05 22.1 9.7 114 178-311 88-201 (328)
46 2pln_A HP1043, response regula 85.1 1.8 7.8E-05 21.5 8.4 77 364-440 55-133 (137)
47 1y0e_A Putative N-acetylmannos 84.9 1.9 7.9E-05 21.4 9.5 51 262-327 166-217 (223)
48 2z6i_A Trans-2-enoyl-ACP reduc 81.8 2.5 0.0001 20.5 10.5 109 177-311 79-191 (332)
49 2wqp_A Polysialic acid capsule 81.6 2.5 0.0001 20.5 8.1 99 198-321 89-188 (349)
50 1vs1_A 3-deoxy-7-phosphoheptul 81.4 2.5 0.00011 20.4 6.3 93 200-314 89-182 (276)
51 1sfl_A 3-dehydroquinate dehydr 81.2 1.9 8.1E-05 21.3 4.6 53 4-56 1-59 (238)
52 1p0k_A Isopentenyl-diphosphate 81.0 2.6 0.00011 20.4 8.9 96 200-312 168-281 (349)
53 3llm_A ATP-dependent RNA helic 80.1 2.7 0.00012 20.2 5.0 160 285-457 57-218 (235)
54 16pk_A PGK, 3-phosphoglycerate 79.1 3 0.00013 19.9 5.5 185 200-401 191-391 (415)
55 1geq_A Tryptophan synthase alp 78.4 3.1 0.00013 19.8 8.7 112 187-311 108-220 (248)
56 3g8r_A Probable spore coat pol 78.3 3.1 0.00013 19.8 8.4 99 198-321 76-175 (350)
57 3ble_A Citramalate synthase fr 77.3 3.3 0.00014 19.6 14.6 195 171-382 38-248 (337)
58 2o55_A Putative glycerophospho 77.3 3.3 0.00014 19.6 6.5 110 190-330 144-256 (258)
59 1h5y_A HISF; histidine biosynt 76.7 1.6 6.6E-05 22.0 3.0 43 268-322 196-238 (253)
60 1q6o_A Humps, 3-keto-L-gulonat 73.7 4.1 0.00017 18.9 8.4 130 186-333 79-213 (216)
61 3mz2_A Glycerophosphoryl diest 72.4 4.4 0.00018 18.7 8.6 121 191-336 161-284 (292)
62 1xi3_A Thiamine phosphate pyro 72.0 4.4 0.00019 18.7 7.2 62 3-64 10-73 (215)
63 1jqn_A Pepcase, PEPC, phosphoe 71.9 4.5 0.00019 18.6 8.0 85 191-275 472-577 (883)
64 1jqo_A Phosphoenolpyruvate car 70.4 4.8 0.0002 18.4 9.9 85 191-275 532-637 (970)
65 1vjz_A Endoglucanase; TM1752, 70.0 4.9 0.00021 18.3 4.2 54 16-71 35-98 (341)
66 2w6r_A Imidazole glycerol phos 69.6 2.7 0.00011 20.3 2.8 127 174-320 84-238 (266)
67 2wzb_A Phosphoglycerate kinase 63.1 6.5 0.00027 17.4 4.9 318 19-397 42-388 (416)
68 1yxy_A Putative N-acetylmannos 62.7 6.6 0.00028 17.4 7.2 120 186-327 100-228 (234)
69 1vp4_A Aminotransferase, putat 62.6 6.7 0.00028 17.3 4.7 20 22-43 32-53 (425)
70 1v71_A Serine racemase, hypoth 62.1 6.8 0.00029 17.3 5.3 157 213-406 40-213 (323)
71 3etn_A Putative phosphosugar i 60.1 4.8 0.0002 18.4 2.6 40 370-409 105-152 (220)
72 3bh0_A DNAB-like replicative h 60.0 4.6 0.0002 18.5 2.5 60 251-311 202-263 (315)
73 1vhn_A Putative flavin oxidore 60.0 3.7 0.00015 19.2 2.0 14 235-248 206-219 (318)
74 2h9a_B CO dehydrogenase/acetyl 59.0 7.6 0.00032 16.9 11.4 63 260-333 163-230 (310)
75 3m47_A Orotidine 5'-phosphate 58.4 7.8 0.00033 16.8 5.1 82 176-261 140-221 (228)
76 1o0y_A Deoxyribose-phosphate a 58.3 7.8 0.00033 16.8 13.0 188 166-384 51-249 (260)
77 3bgw_A DNAB-like replicative h 57.4 3.2 0.00013 19.7 1.3 50 223-278 181-234 (444)
78 3icg_A Endoglucanase D; cellul 57.0 8.2 0.00035 16.7 7.4 52 18-71 46-107 (515)
79 1to6_A Glycerate kinase; glyce 56.2 7.8 0.00033 16.8 3.1 64 213-280 256-320 (371)
80 3hdg_A Uncharacterized protein 55.7 8.6 0.00036 16.5 5.8 89 352-447 37-131 (137)
81 2q6t_A DNAB replication FORK h 55.5 8.5 0.00036 16.6 3.2 49 223-276 184-235 (444)
82 1ve5_A Threonine deaminase; ri 55.0 8.8 0.00037 16.5 3.7 35 371-405 169-207 (311)
83 2whl_A Beta-mannanase, baman5; 54.6 8.9 0.00038 16.4 4.4 23 19-41 33-55 (294)
84 3oa3_A Aldolase; structural ge 54.0 9.1 0.00038 16.3 12.5 189 169-392 69-273 (288)
85 1p5j_A L-serine dehydratase; l 53.6 9.2 0.00039 16.3 8.6 153 214-404 61-233 (372)
86 2qv0_A Protein MRKE; structura 53.6 9.2 0.00039 16.3 8.5 82 365-447 49-137 (143)
87 1vli_A Spore coat polysacchari 53.2 9.4 0.00039 16.3 4.9 97 199-321 100-199 (385)
88 2zyj_A Alpha-aminodipate amino 52.7 9.5 0.0004 16.2 6.8 22 450-471 349-371 (397)
89 1ydo_A HMG-COA lyase; TIM-barr 52.6 9.6 0.0004 16.2 14.9 196 171-382 25-236 (307)
90 1wky_A Endo-beta-1,4-mannanase 52.1 9.7 0.00041 16.1 4.7 52 19-72 41-94 (464)
91 2pz0_A Glycerophosphoryl diest 52.1 9.7 0.00041 16.1 3.4 104 190-329 147-250 (252)
92 3c85_A Putative glutathione-re 51.4 10 0.00042 16.1 6.6 67 371-438 105-175 (183)
93 3ks6_A Glycerophosphoryl diest 50.7 10 0.00043 16.0 5.8 53 257-329 191-243 (250)
94 3bo9_A Putative nitroalkan dio 50.6 10 0.00043 16.0 9.6 114 175-311 91-205 (326)
95 3jug_A Beta-mannanase; TIM-bar 50.4 10 0.00043 15.9 4.4 23 19-41 56-78 (345)
96 1qop_A Tryptophan synthase alp 50.4 10 0.00043 15.9 6.7 71 226-311 160-234 (268)
97 2xed_A Putative maleate isomer 50.2 10 0.00044 15.9 4.9 13 268-280 231-243 (273)
98 2kfw_A FKBP-type peptidyl-prol 50.2 10 0.00044 15.9 4.7 88 86-176 51-147 (196)
99 1moq_A Glucosamine 6-phosphate 49.9 10 0.00044 15.9 3.0 46 191-241 104-150 (368)
100 3no3_A Glycerophosphodiester p 49.5 11 0.00045 15.9 4.5 103 190-329 133-235 (238)
101 2aml_A SIS domain protein; 469 49.4 10 0.00042 16.0 2.8 23 396-418 329-351 (373)
102 2zum_A 458AA long hypothetical 48.8 11 0.00046 15.8 4.7 20 20-39 87-106 (458)
103 1thf_D HISF protein; thermophI 48.5 11 0.00046 15.7 5.0 129 174-324 84-237 (253)
104 3bw2_A 2-nitropropane dioxygen 48.1 11 0.00047 15.7 11.6 206 13-311 18-237 (369)
105 2hqr_A Putative transcriptiona 47.7 11 0.00047 15.7 7.8 32 268-311 66-97 (223)
106 3isl_A Purine catabolism prote 47.4 11 0.00048 15.6 3.9 50 2-59 1-55 (416)
107 2yuj_A Ubiquitin fusion degrad 47.2 11 0.00048 15.6 3.8 65 85-149 112-182 (190)
108 3fcs_B Integrin beta-3; beta p 46.6 12 0.00049 15.5 8.9 52 394-445 304-358 (690)
109 1h4p_A Glucan 1,3-beta-glucosi 46.5 12 0.00049 15.5 4.5 52 19-72 75-136 (408)
110 2i2c_A Probable inorganic poly 45.6 11 0.00046 15.8 2.5 38 367-404 144-185 (272)
111 1o69_A Aminotransferase; struc 45.2 12 0.00052 15.4 5.3 21 197-217 133-153 (394)
112 1cyg_A Cyclodextrin glucanotra 45.2 12 0.00052 15.4 4.6 33 33-71 101-133 (680)
113 1bqc_A Protein (beta-mannanase 44.8 12 0.00052 15.3 3.8 51 19-71 34-86 (302)
114 1ydy_A Glycerophosphoryl diest 44.8 12 0.00052 15.3 3.4 88 227-328 265-356 (356)
115 3cg0_A Response regulator rece 43.9 13 0.00054 15.3 7.6 81 364-447 47-134 (140)
116 1ceo_A Cellulase CELC; glycosy 43.8 13 0.00054 15.2 5.7 51 19-71 30-90 (343)
117 2a3n_A Putative glucosamine-fr 43.6 13 0.00054 15.2 2.6 27 192-218 108-134 (355)
118 3abz_A Beta-glucosidase I; gly 43.6 13 0.00054 15.2 3.8 62 215-276 553-620 (845)
119 3pfn_A NAD kinase; structural 43.5 12 0.0005 15.5 2.4 36 367-402 242-281 (365)
120 2o1b_A Aminotransferase, class 43.5 13 0.00055 15.2 3.7 21 450-471 362-382 (404)
121 3d0f_A Penicillin-binding 1 tr 43.5 13 0.00055 15.2 5.3 44 84-127 50-93 (106)
122 2o0r_A RV0858C (N-succinyldiam 43.5 10 0.00042 16.0 2.0 13 116-128 105-117 (411)
123 3fxa_A SIS domain protein; YP_ 43.4 8.4 0.00035 16.6 1.6 34 371-405 92-130 (201)
124 1egz_A Endoglucanase Z, EGZ, C 43.2 13 0.00055 15.2 7.0 11 151-161 16-26 (291)
125 1n7k_A Deoxyribose-phosphate a 43.0 13 0.00055 15.2 12.9 178 168-382 30-223 (234)
126 1m3s_A Hypothetical protein YC 42.5 11 0.00044 15.9 2.0 33 372-405 80-117 (186)
127 7a3h_A Endoglucanase; hydrolas 42.5 13 0.00056 15.1 5.2 15 261-275 84-98 (303)
128 2zru_A Isopentenyl-diphosphate 42.5 13 0.00056 15.1 7.7 30 270-311 267-296 (368)
129 1u0t_A Inorganic polyphosphate 42.2 9.4 0.00039 16.2 1.7 37 367-403 183-223 (307)
130 2isw_A Putative fructose-1,6-b 41.9 14 0.00058 15.0 6.7 225 18-283 5-262 (323)
131 1d3c_A Cyclodextrin glycosyltr 41.7 14 0.00058 15.0 4.4 32 35-72 107-138 (686)
132 1g01_A Endoglucanase; alpha/be 41.4 14 0.00058 15.0 5.5 21 18-38 54-75 (364)
133 2ozt_A TLR1174 protein; struct 41.3 14 0.00059 15.0 7.6 11 225-235 147-157 (332)
134 1ece_A Endocellulase E1; glyco 41.1 14 0.00059 15.0 4.9 22 19-40 46-67 (358)
135 2an1_A Putative kinase; struct 40.4 14 0.0006 14.9 2.5 36 368-403 172-211 (292)
136 1gvf_A Tagatose-bisphosphate a 40.1 15 0.00061 14.8 7.0 142 113-285 89-241 (286)
137 1tvn_A Cellulase, endoglucanas 39.8 15 0.00062 14.8 6.8 19 19-37 40-59 (293)
138 2cw6_A Hydroxymethylglutaryl-C 39.7 15 0.00062 14.8 14.0 200 170-382 23-235 (298)
139 1z0s_A Probable inorganic poly 39.7 12 0.0005 15.5 1.9 52 367-424 168-223 (278)
140 1vm6_A DHPR, dihydrodipicolina 39.6 15 0.00062 14.8 2.8 91 204-321 27-117 (228)
141 3crn_A Response regulator rece 39.6 15 0.00062 14.8 10.0 73 365-438 41-119 (132)
142 1rvg_A Fructose-1,6-bisphospha 39.5 15 0.00062 14.8 7.0 150 113-285 87-262 (305)
143 2jpp_A Translational repressor 39.3 12 0.00052 15.4 1.9 26 118-144 6-31 (70)
144 3fkj_A Putative phosphosugar i 39.1 11 0.00047 15.7 1.7 16 425-440 271-286 (347)
145 2vt3_A REX, redox-sensing tran 39.1 14 0.00059 15.0 2.2 21 359-379 157-177 (215)
146 1wsc_A Hypothetical protein ST 38.9 15 0.00064 14.7 2.5 54 219-272 125-183 (230)
147 3n9r_A Fructose-bisphosphate a 38.8 15 0.00064 14.7 6.7 226 20-285 6-264 (307)
148 2fli_A Ribulose-phosphate 3-ep 38.7 15 0.00064 14.7 10.7 139 178-331 76-218 (220)
149 3cvj_A Putative phosphoheptose 38.2 15 0.00065 14.6 3.6 37 370-407 107-148 (243)
150 3ipw_A Hydrolase TATD family p 37.6 16 0.00066 14.6 6.0 103 173-277 51-175 (325)
151 2qde_A Mandelate racemase/muco 37.5 16 0.00067 14.6 8.9 85 182-276 211-297 (397)
152 2dgd_A 223AA long hypothetical 37.3 16 0.00067 14.5 7.6 38 235-282 171-208 (223)
153 1fob_A Beta-1,4-galactanase; B 37.3 16 0.00067 14.5 4.6 47 20-72 30-82 (334)
154 3dkp_A Probable ATP-dependent 37.0 16 0.00068 14.5 2.6 129 286-426 51-186 (245)
155 2bpl_A Glucosamine--fructose-6 36.9 16 0.00068 14.5 2.9 59 215-282 319-379 (608)
156 3jr2_A Hexulose-6-phosphate sy 36.7 16 0.00068 14.5 7.5 26 298-323 181-206 (218)
157 3c3j_A Putative tagatose-6-pho 36.7 16 0.00066 14.6 2.2 53 392-449 303-364 (384)
158 3i0z_A Putative tagatose-6-pho 36.5 15 0.00063 14.7 2.0 10 434-443 355-364 (389)
159 3g68_A Putative phosphosugar i 36.5 16 0.00069 14.5 2.3 16 403-418 318-333 (352)
160 2f9i_A Acetyl-coenzyme A carbo 36.4 16 0.00069 14.5 4.6 13 173-185 18-30 (327)
161 3eod_A Protein HNR; response r 36.4 16 0.00069 14.5 8.5 75 364-438 44-124 (130)
162 1jeo_A MJ1247, hypothetical pr 36.3 17 0.00069 14.4 2.4 33 373-406 84-121 (180)
163 2k8i_A SLYD, peptidyl-prolyl C 36.3 17 0.00069 14.4 4.6 58 87-144 52-118 (171)
164 2r6a_A DNAB helicase, replicat 35.7 12 0.0005 15.5 1.4 58 217-281 183-244 (454)
165 2z0t_A Putative uncharacterize 35.7 16 0.00069 14.5 2.1 24 114-137 30-53 (109)
166 3l55_A B-1,4-endoglucanase/cel 35.6 17 0.00071 14.4 6.5 54 18-73 53-114 (353)
167 1yad_A Regulatory protein TENI 35.5 17 0.00071 14.3 11.5 39 296-334 177-215 (221)
168 3ewb_X 2-isopropylmalate synth 35.3 17 0.00072 14.3 14.8 201 169-384 22-234 (293)
169 1j5x_A Glucosamine-6-phosphate 35.3 12 0.00051 15.4 1.4 25 35-59 9-33 (342)
170 1z7m_E ATP phosphoribosyltrans 35.2 9.7 0.00041 16.2 0.9 26 361-386 138-164 (208)
171 1t3o_A Carbon storage regulato 35.1 17 0.0007 14.4 2.1 32 114-146 23-54 (95)
172 3eeg_A 2-isopropylmalate synth 34.9 17 0.00073 14.3 12.9 199 170-383 24-234 (325)
173 3n9k_A Glucan 1,3-beta-glucosi 34.3 18 0.00074 14.2 4.9 51 19-71 75-134 (399)
174 2c0h_A Mannan endo-1,4-beta-ma 34.1 18 0.00075 14.2 5.0 19 20-38 48-66 (353)
175 1zh2_A KDP operon transcriptio 33.8 18 0.00076 14.2 9.7 82 353-440 32-118 (121)
176 1cr0_A DNA primase/helicase; R 33.7 18 0.00074 14.2 2.0 58 253-310 170-231 (296)
177 3noy_A 4-hydroxy-3-methylbut-2 33.7 18 0.00076 14.1 9.4 137 184-333 56-202 (366)
178 2osx_A Endoglycoceramidase II; 33.5 18 0.00077 14.1 5.3 51 19-71 68-126 (481)
179 3ez1_A Aminotransferase MOCR f 33.4 18 0.00077 14.1 5.0 26 186-211 144-169 (423)
180 2bti_A Carbon storage regulato 33.4 17 0.00073 14.3 1.9 26 118-144 8-33 (63)
181 2do3_A Transcription elongatio 33.2 17 0.00071 14.4 1.9 25 106-130 6-30 (69)
182 1kmt_A RHO GDP-dissociation in 32.9 16 0.00068 14.5 1.7 34 62-98 19-52 (141)
183 2qr3_A Two-component system re 32.8 19 0.00079 14.0 8.4 73 365-438 41-124 (140)
184 3ec2_A DNA replication protein 32.7 19 0.00079 14.0 5.3 74 192-279 69-142 (180)
185 3olq_A Universal stress protei 32.7 19 0.00079 14.0 5.6 45 359-404 254-307 (319)
186 3mmw_A Endoglucanase; TIM barr 32.7 19 0.00079 14.0 6.5 52 19-72 35-96 (317)
187 3k13_A 5-methyltetrahydrofolat 32.5 19 0.00079 14.0 5.4 53 21-75 41-96 (300)
188 2xio_A Putative deoxyribonucle 32.4 19 0.0008 14.0 4.7 101 173-276 26-146 (301)
189 3bbo_W Ribosomal protein L24; 32.4 15 0.00065 14.7 1.5 19 84-102 66-84 (191)
190 3eul_A Possible nitrate/nitrit 32.2 19 0.0008 14.0 10.3 75 366-441 56-136 (152)
191 2bwj_A Adenylate kinase 5; pho 32.2 7.7 0.00033 16.9 -0.0 38 1-43 6-43 (199)
192 1vim_A Hypothetical protein AF 32.2 19 0.0008 14.0 2.0 31 373-404 91-126 (200)
193 3knz_A Putative sugar binding 32.1 16 0.00067 14.6 1.6 18 401-418 331-348 (366)
194 1f6y_A 5-methyltetrahydrofolat 31.9 19 0.00081 13.9 4.9 53 21-75 29-81 (262)
195 1h1n_A Endo type cellulase ENG 31.7 19 0.00081 13.9 7.0 51 19-71 33-93 (305)
196 1yt5_A Inorganic polyphosphate 31.4 9.6 0.0004 16.2 0.4 51 368-424 144-198 (258)
197 1xvi_A MPGP, YEDP, putative ma 31.2 20 0.00083 13.9 4.2 34 1-34 3-46 (275)
198 2oog_A Glycerophosphoryl diest 31.1 20 0.00083 13.9 5.1 97 198-328 179-279 (287)
199 3op7_A Aminotransferase class 31.1 20 0.00083 13.9 5.4 17 450-469 332-348 (375)
200 1qpg_A PGK, 3-phosphoglycerate 31.1 8.7 0.00037 16.5 0.1 312 19-397 42-386 (415)
201 2cks_A Endoglucanase E-5; carb 30.9 20 0.00084 13.8 7.1 35 158-195 30-64 (306)
202 2zc0_A Alanine glyoxylate tran 30.7 20 0.00084 13.8 5.4 19 23-43 26-44 (407)
203 3oru_A DUF1989 family protein; 30.4 20 0.00085 13.8 4.1 56 84-139 46-115 (234)
204 1zmr_A Phosphoglycerate kinase 30.4 20 0.00086 13.8 4.1 294 19-397 40-356 (387)
205 2jep_A Xyloglucanase; family 5 30.4 20 0.00086 13.8 7.0 22 19-40 71-92 (395)
206 3nl6_A Thiamine biosynthetic b 30.2 21 0.00086 13.7 6.6 45 20-64 28-72 (540)
207 2zvr_A Uncharacterized protein 29.8 21 0.00087 13.7 6.8 97 167-276 35-132 (290)
208 1ad1_A DHPS, dihydropteroate s 29.6 21 0.00088 13.7 4.7 68 5-74 1-88 (266)
209 1o63_A ATP phosphoribosyltrans 29.4 12 0.00051 15.4 0.6 25 361-385 131-156 (219)
210 1qho_A Alpha-amylase; glycosid 29.1 21 0.00089 13.6 4.9 61 158-219 193-256 (686)
211 1u6e_A 3-oxoacyl-[acyl-carrier 29.1 21 0.0009 13.6 4.9 42 429-474 293-334 (335)
212 2pfs_A USP, universal stress p 29.1 21 0.0009 13.6 5.6 45 359-404 97-149 (150)
213 3cu5_A Two component transcrip 28.9 21 0.0009 13.6 6.6 76 363-439 41-125 (141)
214 1wst_A MSAT, multiple substrat 28.7 22 0.00091 13.6 5.5 30 435-471 359-389 (417)
215 3ei9_A LL-diaminopimelate amin 28.6 22 0.00091 13.6 4.6 21 450-471 387-407 (432)
216 1v5x_A PRA isomerase, phosphor 28.5 22 0.00092 13.6 7.1 46 187-234 146-191 (203)
217 3fwz_A Inner membrane protein 28.3 22 0.00092 13.5 5.9 56 367-423 67-126 (140)
218 3oj0_A Glutr, glutamyl-tRNA re 28.2 22 0.00093 13.5 7.9 70 358-431 7-78 (144)
219 3o1n_A 3-dehydroquinate dehydr 28.1 22 0.00093 13.5 5.2 32 260-296 149-180 (276)
220 1gte_A Dihydropyrimidine dehyd 28.0 22 0.00093 13.5 11.1 169 260-448 623-848 (1025)
221 3cz5_A Two-component response 28.0 22 0.00094 13.5 8.0 67 365-432 45-117 (153)
222 2zj3_A Glucosamine--fructose-6 28.0 22 0.00094 13.5 1.8 28 69-96 39-66 (375)
223 2z08_A Universal stress protei 27.8 22 0.00094 13.5 6.0 41 359-400 87-136 (137)
224 1jr2_A Uroporphyrinogen-III sy 27.6 23 0.00095 13.4 5.1 65 375-443 213-285 (286)
225 1h3d_A ATP-phosphoribosyltrans 27.5 15 0.00064 14.7 0.8 16 229-244 210-225 (299)
226 1vpz_A Carbon storage regulato 27.3 23 0.00096 13.4 1.9 29 115-144 15-43 (73)
227 1zq7_A Hypothetical protein MM 27.2 23 0.00096 13.4 1.9 47 227-273 118-168 (207)
228 3fok_A Uncharacterized protein 27.0 23 0.00097 13.4 12.1 142 294-441 131-298 (307)
229 3jte_A Response regulator rece 26.4 24 0.00099 13.3 6.1 57 381-438 63-121 (143)
230 2v82_A 2-dehydro-3-deoxy-6-pho 26.3 24 0.001 13.3 5.3 114 172-324 17-133 (212)
231 1tzb_A Glucose-6-phosphate iso 26.1 21 0.00089 13.6 1.4 19 404-422 274-292 (302)
232 1jpd_X L-Ala-D/L-Glu epimerase 26.1 24 0.001 13.3 4.7 15 261-275 262-276 (324)
233 2vd3_A ATP phosphoribosyltrans 26.1 18 0.00076 14.2 1.0 14 365-378 269-282 (289)
234 2kct_A Cytochrome C-type bioge 26.1 24 0.001 13.2 5.1 56 71-126 7-65 (94)
235 2hx1_A Predicted sugar phospha 26.0 24 0.001 13.2 2.9 14 262-275 153-166 (284)
236 1ltk_A Phosphoglycerate kinase 25.9 12 0.00052 15.4 0.1 314 19-397 52-397 (425)
237 1nh8_A ATP phosphoribosyltrans 25.8 16 0.00066 14.6 0.6 19 361-379 280-298 (304)
238 2tps_A Protein (thiamin phosph 25.7 24 0.001 13.2 6.7 56 8-63 19-80 (227)
239 2a9o_A Response regulator; ess 25.7 24 0.001 13.2 8.5 71 368-439 42-117 (120)
240 3nav_A Tryptophan synthase alp 25.5 24 0.001 13.2 9.2 71 226-311 163-237 (271)
241 1rd5_A Tryptophan synthase alp 25.5 24 0.001 13.2 8.7 71 226-311 156-230 (262)
242 1q3t_A Cytidylate kinase; nucl 25.3 24 0.001 13.2 1.5 36 8-48 16-52 (236)
243 2dum_A Hypothetical protein PH 25.3 25 0.001 13.1 5.9 43 359-402 105-156 (170)
244 1olt_A Oxygen-independent copr 25.3 25 0.001 13.1 6.2 67 387-453 349-426 (457)
245 2oyc_A PLP phosphatase, pyrido 25.1 25 0.001 13.1 3.6 15 295-309 244-258 (306)
246 1znw_A Guanylate kinase, GMP k 24.9 25 0.0011 13.1 1.9 39 4-42 17-55 (207)
247 1a9x_A Carbamoyl phosphate syn 24.7 25 0.0011 13.1 3.2 22 53-74 513-535 (1073)
248 2j41_A Guanylate kinase; GMP, 24.5 25 0.0011 13.1 3.4 41 2-42 1-42 (207)
249 2rkb_A Serine dehydratase-like 24.3 26 0.0011 13.0 9.6 117 262-405 69-194 (318)
250 1ydn_A Hydroxymethylglutaryl-C 24.3 26 0.0011 13.0 11.5 196 170-382 22-234 (295)
251 1doa_B RHO GDI 1, protein (GDP 24.3 26 0.0011 13.0 2.0 26 68-96 103-128 (219)
252 1edg_A Endoglucanase A; family 24.2 26 0.0011 13.0 6.3 52 19-72 63-123 (380)
253 3bmv_A Cyclomaltodextrin gluca 24.2 26 0.0011 13.0 5.3 31 35-71 108-138 (683)
254 1vq8_T 50S ribosomal protein L 24.2 19 0.0008 14.0 0.8 74 83-180 39-113 (120)
255 2v3j_A Essential for mitotic g 23.8 22 0.00092 13.5 1.1 25 312-336 223-247 (258)
256 1du6_A PBX1, homeobox protein 23.4 27 0.0011 12.9 3.0 26 276-301 14-43 (64)
257 1lwj_A 4-alpha-glucanotransfer 23.4 27 0.0011 12.9 2.1 34 32-71 58-91 (441)
258 3f6c_A Positive transcription 23.4 27 0.0011 12.9 8.1 51 381-432 60-112 (134)
259 3if2_A Aminotransferase; YP_26 23.4 27 0.0011 12.9 6.1 30 436-472 384-420 (444)
260 3a10_A Response regulator; pho 23.3 27 0.0011 12.9 7.0 66 365-432 39-109 (116)
261 3mt0_A Uncharacterized protein 23.3 27 0.0011 12.9 5.7 47 359-406 225-280 (290)
262 3c2q_A Uncharacterized conserv 23.2 27 0.0011 12.9 1.8 18 262-279 230-247 (345)
263 1wcw_A Uroporphyrinogen III sy 23.1 27 0.0011 12.9 6.1 68 369-441 181-259 (261)
264 2oz8_A MLL7089 protein; struct 23.0 27 0.0011 12.8 8.4 13 224-236 175-187 (389)
265 3di4_A Uncharacterized protein 22.9 27 0.0011 12.8 4.0 55 84-138 60-129 (286)
266 2c95_A Adenylate kinase 1; AP4 22.8 17 0.00071 14.4 0.3 38 3-45 5-42 (196)
267 2yva_A DNAA initiator-associat 22.6 28 0.0012 12.8 7.3 51 356-406 24-85 (196)
268 2iut_A DNA translocase FTSK; n 22.3 28 0.0012 12.8 2.0 60 244-304 353-421 (574)
269 3dyd_A Tyrosine aminotransfera 22.3 28 0.0012 12.7 4.6 19 450-471 385-403 (427)
270 1zgz_A Torcad operon transcrip 22.3 28 0.0012 12.7 10.7 74 365-439 40-118 (122)
271 3kta_B Chromosome segregation 22.1 28 0.0012 12.7 2.2 36 383-418 106-141 (173)
272 1ve4_A ATP phosphoribosyltrans 22.0 28 0.0012 12.7 1.4 24 362-385 137-161 (206)
273 2j01_Y 50S ribosomal protein L 22.0 21 0.00088 13.7 0.7 74 84-169 4-77 (110)
274 3inp_A D-ribulose-phosphate 3- 21.9 28 0.0012 12.7 9.9 135 178-333 101-245 (246)
275 2qsj_A DNA-binding response re 21.8 29 0.0012 12.7 4.3 17 295-311 91-107 (154)
276 2wwb_L 60S ribosomal protein L 21.7 25 0.001 13.2 1.0 19 84-102 47-65 (127)
277 3hgm_A Universal stress protei 21.7 29 0.0012 12.7 5.0 41 359-400 98-147 (147)
278 3hba_A Putative phosphosugar i 21.6 29 0.0012 12.7 2.6 45 191-240 95-139 (334)
279 1tmy_A CHEY protein, TMY; chem 21.6 29 0.0012 12.6 9.9 69 364-433 40-114 (120)
280 2xlg_A SLL1785 protein, CUCA; 21.5 12 0.00051 15.4 -0.6 121 116-250 104-238 (239)
281 1kbi_A Cytochrome B2, L-LCR; f 21.3 29 0.0012 12.6 7.9 112 198-325 331-448 (511)
282 3cm0_A Adenylate kinase; ATP-b 21.3 29 0.0012 12.6 1.8 37 4-45 1-37 (186)
283 2g0w_A LMO2234 protein; putati 21.3 29 0.0012 12.6 6.5 79 177-276 40-124 (296)
284 2qzj_A Two-component response 21.3 29 0.0012 12.6 9.8 73 367-440 44-121 (136)
285 2poc_A D-fructose-6-, isomeras 21.0 30 0.0012 12.6 1.7 47 190-241 101-147 (367)
286 3bk2_A RNAse J, metal dependen 20.9 30 0.0013 12.5 2.8 35 33-68 75-109 (562)
287 3d3a_A Beta-galactosidase; pro 20.7 30 0.0013 12.5 4.5 52 20-75 40-100 (612)
288 1o1z_A GDPD, glycerophosphodie 20.7 30 0.0013 12.5 8.5 46 259-325 187-232 (234)
289 1id1_A Putative potassium chan 20.6 30 0.0013 12.5 5.2 54 368-422 68-125 (153)
290 2ayx_A Sensor kinase protein R 20.6 30 0.0013 12.5 10.2 49 390-439 197-246 (254)
291 1ds6_B RHO GDP-dissociation in 20.4 19 0.00082 13.9 0.3 13 84-96 77-89 (180)
292 1wrb_A DJVLGB; RNA helicase, D 20.3 31 0.0013 12.5 7.7 123 300-425 56-184 (253)
293 3guw_A Uncharacterized protein 20.2 31 0.0013 12.4 4.8 46 226-277 81-130 (261)
294 2gkg_A Response regulator homo 20.2 31 0.0013 12.4 8.7 81 352-438 35-123 (127)
295 3cpe_A Terminase, DNA packagin 20.0 27 0.0011 12.9 0.9 14 83-96 249-262 (592)
296 1vhk_A Hypothetical protein YQ 20.0 31 0.0013 12.4 9.2 147 85-245 13-178 (268)
No 1
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=0 Score=1181.79 Aligned_cols=475 Identities=38% Similarity=0.616 Sum_probs=459.3
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCC
Q ss_conf 75269994187757999999999739978999888889899999999999999974992799998789867886548981
Q gi|254780442|r 5 RRIKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELRSRRPIGILIDLQGPKFRVGKFANSK 84 (480)
Q Consensus 5 rktKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkiR~g~~~~~~ 84 (480)
|||||||||||||++++.|++|+++|||+||||||||++|||+++++++|+++++.+++++||+||||||||||.|++++
T Consensus 3 RkTKIv~TiGPas~~~e~l~~li~aG~nv~RlN~SHg~~e~h~~~i~~iR~~~~~~~~~vaIllDl~GpkIRtg~~~~~~ 82 (587)
T 2e28_A 3 RKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMENGA 82 (587)
T ss_dssp CCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCCBBCCCTTSC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCE
T ss_conf 78769982488869999999999879999999899999999999999999999970998079997999856886327982
Q ss_pred EEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEECCCCCCC--CEEEEEECCCCEEECCCCCCCC
Q ss_conf 89658999999532455644422126644222113365267406842210234454--1124551388087114564467
Q gi|254780442|r 85 VDLTEGQIFTLDNKDSLGSSDRVMLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGI--GFIKCKVIAGISIADRKGISFP 162 (480)
Q Consensus 85 i~l~~G~~v~l~~~~~~~~~~~i~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~--~~i~c~V~~gG~l~s~Kgvnip 162 (480)
++|++|++++|+.++..++++.++++|++|++++++||.|++|||.+.|+|.+++. +.+.|+|++||.|+++||||+|
T Consensus 83 i~L~~G~~v~l~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~v~~v~~~~~~i~~~V~~gG~L~~~KgVn~P 162 (587)
T 2e28_A 83 IELKEGSKLVISMSEVLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGVNVP 162 (587)
T ss_dssp BCCCSSCEEEEESSCCCCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCBEECT
T ss_pred EEECCCCEEEEECCCCCCCCCEEECCCHHHHHHCCCCCEEEEECCCEEEEEEEEECCCCEEEEEECCCEEECCCCEEECC
T ss_conf 89658999999568868976789745088797667998799944836999999715653899997303598699716527
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCC---CCEEEEEECCHHHHHHHHHHHHHHHEE
Q ss_conf 85445556765567789988734885325058557734799999862003---433555327856631178887533124
Q gi|254780442|r 163 DTFLTTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQN---KIGLMSKIEKPRAIEYASEIIQLSDAV 239 (480)
Q Consensus 163 ~~~i~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~---~~~IiaKIE~~~al~nl~eI~~~sDgi 239 (480)
|..+++|+||+||++||+||+++ ++||||+||||+++||.++|++|.+. +++||||||+++|++|||||+++||||
T Consensus 163 ~~~~~lp~lTekD~~di~f~~~~-~vD~ialSFVr~a~DV~~iR~~l~~~~~~~i~IIAKIE~~~av~NldeIi~~sDGI 241 (587)
T 2e28_A 163 GVKVNLPGITEKDRADILFGIRQ-GIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADGL 241 (587)
T ss_dssp TSCCCCCSCCHHHHHHHHHHHHH-TCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCEE
T ss_conf 98678733445459999876123-89899856768635699999877652166665578970545776599988756589
Q ss_pred EEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf 75222200215876736899999999851398399805767888828898403477899998519968998144435446
Q gi|254780442|r 240 MVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSY 319 (480)
Q Consensus 240 miaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~y 319 (480)
||||||||+|+|+|+||.+||+||++||++|||||+||||||||++||+|||||++||||||+||+||+|||+|||+|+|
T Consensus 242 MVARGDLGvEip~e~VP~vQK~II~kc~~~gKPVI~ATQMLeSMi~nprPTRAEvsDVANAV~DGtDavMLSgETA~G~y 321 (587)
T 2e28_A 242 MVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQY 321 (587)
T ss_dssp EEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 99766631328999989999999999998199599816877767528999744567799998637856887465446758
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCEEE
Q ss_conf 58999999998876301012444444320387888878999999998610478689997088379999984188886999
Q gi|254780442|r 320 PVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGLRAARERPKLEIIA 399 (480)
Q Consensus 320 P~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS~~RP~~pIia 399 (480)
|+++|++|++||+++|++.++.............+.++++|.||+++|++++|++|+++|+||+||+++|||||++||+|
T Consensus 322 PveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TAr~iSk~RP~~PIiA 401 (587)
T 2e28_A 322 PVEAVKTMHQIALRTEQALEHRDILSQRTKESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPIIA 401 (587)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEE
T ss_conf 78999999999999985002345555420355687799999999999864899889998899779999983395998999
Q ss_pred EECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECHHHCCC
Q ss_conf 92998999876665393799936879999999999999998888778877999852227888864159999945041157
Q gi|254780442|r 400 LSPMIQTARRLALVWGIHCVVTEDASDSDDMVNRACRIVVEQGFGKPGDRIIISAGLPLGTPGSTNMLRIAYIGADGLSG 479 (480)
Q Consensus 400 iT~~~~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~~~g~i~~GD~VVvv~G~p~~~~G~TN~irv~~Vg~~~~~g 479 (480)
+|++++++|||+|+|||+|+++++.++.+++++.++++++++|++++||.||+|+|+|.|.+|+||+|||++||+.+.+|
T Consensus 402 ~T~~~~~~R~L~L~wGV~p~~~~~~~~~d~~i~~a~~~~~~~g~v~~GD~VVvtaG~p~g~~G~TN~ikV~~Vg~~l~~g 481 (587)
T 2e28_A 402 VTSNEAVSRRLALVWGVYTKEAPHVNTTDEMLDVAVDAAVRSGLVKHGDLVVITAGVPVGETGSTNLMKVHVISDLLAKG 481 (587)
T ss_dssp EESSHHHHHHGGGSTTEEEEECCCCCSHHHHHHHHHHHHHHHTCCCTTCEEEEEECSSCSSCCCCCEEEEEECSCEEEEC
T ss_pred ECCCHHHHHHHHECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEHHHHHCC
T ss_conf 85998999876450680798778889999999999999997698789598999834569989877599999931225367
Q ss_pred C
Q ss_conf 9
Q gi|254780442|r 480 M 480 (480)
Q Consensus 480 ~ 480 (480)
.
T Consensus 482 ~ 482 (587)
T 2e28_A 482 Q 482 (587)
T ss_dssp E
T ss_pred E
T ss_conf 0
No 2
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 1zjh_A 3g2g_A 1t5a_A* 3bjt_A 3bjf_A* 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* 1aqf_A* 1pkm_A 2g50_A* 1pkn_A 2vgb_A* 2vgf_A* 2vgg_A* ...
Probab=100.00 E-value=0 Score=1137.89 Aligned_cols=469 Identities=36% Similarity=0.536 Sum_probs=444.1
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC------CCEEEEEECCCCEEE
Q ss_conf 77752699941877579999999997399789998888898999999999999999749------927999987898678
Q gi|254780442|r 3 NLRRIKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELRSR------RPIGILIDLQGPKFR 76 (480)
Q Consensus 3 ~mrktKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~~~------~~i~Il~Dl~GpkiR 76 (480)
..|||||||||||||++++.|++|+++|||+||||||||++|+|+++++++|+++++++ +||+||+||||||||
T Consensus 60 ~~R~TKIi~TiGPas~~~e~l~~li~aG~nv~RiN~SHg~~e~~~~~i~~iR~~~~~~~~~~~~~~pvaIllDl~GpkIR 139 (550)
T 3gr4_A 60 TARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR 139 (550)
T ss_dssp SCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTTTTCTTTCCCCEEEEECCCSCCB
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEE
T ss_conf 88887199986888699999999998799899998999999999999999999999748664578522899979998678
Q ss_pred EEECCC---CCEEECCCCEEEEECCCC---CCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEECCC
Q ss_conf 865489---818965899999953245---56444221266442221133652674068422102344541124551388
Q gi|254780442|r 77 VGKFAN---SKVDLTEGQIFTLDNKDS---LGSSDRVMLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKVIAG 150 (480)
Q Consensus 77 ~g~~~~---~~i~l~~G~~v~l~~~~~---~~~~~~i~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V~~g 150 (480)
||.|++ ++++|++|++|+|+.++. .++.+.++++|+++++.+++||.|++|||.+.|+|++++++.+.|+|++|
T Consensus 140 tG~l~~~~~~~i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~~l~~~vk~Gd~I~idDG~i~l~V~~~~~~~i~~~V~~g 219 (550)
T 3gr4_A 140 TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENG 219 (550)
T ss_dssp BCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEEEEC
T ss_pred EEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEEECCHHCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEEECCC
T ss_conf 88955898412796589999998278656788777687454101000377838999547508999887068517997257
Q ss_pred CEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCC--CCEEEEEECCHHHHHH
Q ss_conf 08711456446785445556765567789988734885325058557734799999862003--4335553278566311
Q gi|254780442|r 151 ISIADRKGISFPDTFLTTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQN--KIGLMSKIEKPRAIEY 228 (480)
Q Consensus 151 G~l~s~Kgvnip~~~i~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~--~~~IiaKIE~~~al~n 228 (480)
|.|+++||+|+||..+++|+||+||++||+||++. ++|||++||||+++||.++|+++++. +++||||||+++|++|
T Consensus 220 G~L~s~KgvnlP~~~~~lp~ltekD~~di~fa~~~-~vD~ialSFVr~a~dv~~~r~~l~~~g~~i~IIaKIE~~~av~N 298 (550)
T 3gr4_A 220 GSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQ-DVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRR 298 (550)
T ss_dssp EEECSSCBEECTTSCCCCCSSCHHHHHHHHHHHHT-TCSEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHT
T ss_pred CEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHH
T ss_conf 38769972641897567522668789999999874-99789960668766699999999964998428996521024441
Q ss_pred HHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf 78887533124752222002158767368999999998513983998057678888288984034778999985199689
Q gi|254780442|r 229 ASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAI 308 (480)
Q Consensus 229 l~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~i 308 (480)
||||+++||||||||||||+|+|+|+||.+||+||++||++|||||+||||||||++||+|||||++||||||+||+|||
T Consensus 299 ldeIl~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVIvATqmLeSMi~~p~PTRAEvsDVaNAV~DGaDav 378 (550)
T 3gr4_A 299 FDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCI 378 (550)
T ss_dssp HHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEE
T ss_conf 67787636689995566011289999999999999999874992898457677676389997067888998997498379
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH--HHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 9814443544658999999998876301012444444--32038788887899999999861047868999708837999
Q gi|254780442|r 309 MLSAETASGSYPVDAVRTMSLVASSAERDSSWLEMRS--LRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGL 386 (480)
Q Consensus 309 mLs~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~--~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~ 386 (480)
|||||||+|+||+++|++|++||+++|++.++..... ........+.++++|.+|+++|++++|++||+||+||+||+
T Consensus 379 MLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~~av~~A~~~~a~aIv~~T~sG~ta~ 458 (550)
T 3gr4_A 379 MLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAH 458 (550)
T ss_dssp EESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHTTCSCEEEECSSSHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH
T ss_conf 97355246867789999999999998723003566776322566788878999999999987379998999869659999
Q ss_pred HHHHHCCCCCEEEEECCHHHHHHHHHHCCCEEEEECCC------CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC
Q ss_conf 99841888869999299899987666539379993687------999999999999999888877887799985222788
Q gi|254780442|r 387 RAARERPKLEIIALSPMIQTARRLALVWGIHCVVTEDA------SDSDDMVNRACRIVVEQGFGKPGDRIIISAGLPLGT 460 (480)
Q Consensus 387 ~iS~~RP~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~------~~~~~~i~~a~~~l~~~g~i~~GD~VVvv~G~p~~~ 460 (480)
++|+|||++||+|+|++++++|||+|+|||+|++++.. ++.+++++.|+++++++|++++||.||+|+|+|.|
T Consensus 459 ~iS~~RP~~PI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~i~~a~~~~~~~g~~~~GD~VVvv~G~~~g- 537 (550)
T 3gr4_A 459 QVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPG- 537 (550)
T ss_dssp HHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHHHHHHHHTTSCCTTCEEEEEEESSSS-
T ss_pred HHHHHCCCCCEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC-
T ss_conf 9995595998899899889999756407818998457543222027999999999999986999996989999477799-
Q ss_pred CCCCCEEEEEEEC
Q ss_conf 8864159999945
Q gi|254780442|r 461 PGSTNMLRIAYIG 473 (480)
Q Consensus 461 ~G~TN~irv~~Vg 473 (480)
+|+||+|||++|+
T Consensus 538 ~G~TN~irv~~Vp 550 (550)
T 3gr4_A 538 SGFTNTMRVVPVP 550 (550)
T ss_dssp TTCEEEEEEEECC
T ss_pred CCCCEEEEEEECC
T ss_conf 9865379999759
No 3
>3ma8_A Pyruvate kinase; parasitology, pyruvate kiase, glycol kinase, magnesium, transferase, structural genomi structural genomics consortium; HET: CIT; 2.64A {Cryptosporidium parvum}
Probab=100.00 E-value=0 Score=1138.47 Aligned_cols=470 Identities=34% Similarity=0.512 Sum_probs=447.9
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH-HCCCCEEEEEECCCCEEEEEECC
Q ss_conf 77752699941877579999999997399789998888898999999999999999-74992799998789867886548
Q gi|254780442|r 3 NLRRIKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVEL-RSRRPIGILIDLQGPKFRVGKFA 81 (480)
Q Consensus 3 ~mrktKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~-~~~~~i~Il~Dl~GpkiR~g~~~ 81 (480)
..|||||||||||||++++.|++|+++|||+||||||||++|||.+++++||++++ +.+++|+||+||||||||||.|+
T Consensus 50 ~~r~TKIiaTiGPas~~~~~l~~li~aG~~v~RiN~SHgs~e~~~~~i~~iR~~~~~~~~~~v~I~lDl~GpkiRtg~~~ 129 (534)
T 3ma8_A 50 TQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPHSTVGIMLDTKGPEIRTGMLE 129 (534)
T ss_dssp HTCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHHSTTSCCEEEEECCCSCCBBCCCS
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECC
T ss_conf 44786299823888699999999998799999997899999999999999999998648994289995899864787627
Q ss_pred CC-CEEECCCCEEEEECCC-CCCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEECCCCC
Q ss_conf 98-1896589999995324-556444221266442221133652674068422102344541124551388087114564
Q gi|254780442|r 82 NS-KVDLTEGQIFTLDNKD-SLGSSDRVMLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKVIAGISIADRKGI 159 (480)
Q Consensus 82 ~~-~i~l~~G~~v~l~~~~-~~~~~~~i~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgv 159 (480)
++ +++|++|++++|+.+. ..++++.++++|+++++.+++||.|++|||.+.|+|++++++.+.|+|++||+|+++|||
T Consensus 130 ~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~I~idDG~i~l~V~~~~~~~v~~~v~~~G~L~s~KgV 209 (534)
T 3ma8_A 130 GGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIGDDFIVCKVLNSVTIGERKNM 209 (534)
T ss_dssp SSSCCCCCTTC--CEESCCSSCCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEECSCCCCCSSCBE
T ss_pred CCCEEEECCCCEEEEEECCCCCCCCCEEEECCHHHHHHCCCCCEEEEECCCEEEEEEEECCCEEEEEEECCEEECCCCEE
T ss_conf 99658844899999994886689866785150676753578998999379548999996498599997525483488558
Q ss_pred CCCCCCCCCCCCCHHHHHHH-HHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCC---------CCEEEEEECCHHHHHHH
Q ss_conf 46785445556765567789-988734885325058557734799999862003---------43355532785663117
Q gi|254780442|r 160 SFPDTFLTTQALTQKDREDL-HAALQTCEVDWVALSFIQSADDLLEIRKIISQN---------KIGLMSKIEKPRAIEYA 229 (480)
Q Consensus 160 nip~~~i~l~~ltekD~~di-~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~---------~~~IiaKIE~~~al~nl 229 (480)
|+||..+++|+||++|+.|+ +||+++ ++|||++||||+++||+++|++++++ +++||||||+++|++||
T Consensus 210 nip~~~~~lp~ltekD~~di~~~a~~~-~vD~valSFV~s~~Dv~~~r~~l~~~~~~~~~~~~~i~iiaKIE~~~al~nl 288 (534)
T 3ma8_A 210 NLPGCKVHLPIIGDKDRHDIVDFALKY-NLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINF 288 (534)
T ss_dssp ECTTCCCCSCSSCHHHHHHHHTTTTTT-TCSEEEECSCCSHHHHHHHHHHHHHCCTTTTTCCCCCEEEEEECSHHHHHTH
T ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHC-CCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCHHHCCH
T ss_conf 735545666545546299999999875-9999999065707889999998875254323566331113533240211017
Q ss_pred HHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 88875331247522220021587673689999999985139839980576788882889840347789999851996899
Q gi|254780442|r 230 SEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIM 309 (480)
Q Consensus 230 ~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~im 309 (480)
|||+++||||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++||||||+||+||+|
T Consensus 289 deI~~~sDgimVaRGDLg~ei~~e~vp~~Qk~ii~~c~~~gkPvivATqmLeSM~~~p~PTRAEvsDVanav~dGaD~vm 368 (534)
T 3ma8_A 289 DSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVM 368 (534)
T ss_dssp HHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 76611586899976763243898898899999999999749929998801677874899860779999999864684798
Q ss_pred ECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH--HHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf 814443544658999999998876301012444444--320387888878999999998610478689997088379999
Q gi|254780442|r 310 LSAETASGSYPVDAVRTMSLVASSAERDSSWLEMRS--LRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGLR 387 (480)
Q Consensus 310 Ls~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~--~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~ 387 (480)
||+|||+|+||+++|++|++||++||++.++...+. ......+.+..+++|.+|+++|++++|++||+||+||+||++
T Consensus 369 Ls~ETA~G~~P~e~V~~~~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~eaia~aAv~lA~~l~AkaIVv~T~SG~TAr~ 448 (534)
T 3ma8_A 369 LSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVNAKLIITITETGNTARL 448 (534)
T ss_dssp ESHHHHTCSCHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHH
T ss_pred ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH
T ss_conf 72431467798999999999999998644466677665421578888899999999999724798889998798289999
Q ss_pred HHHHCCCCCEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEE
Q ss_conf 98418888699992998999876665393799936879999999999999998888778877999852227888864159
Q gi|254780442|r 388 AARERPKLEIIALSPMIQTARRLALVWGIHCVVTEDASDSDDMVNRACRIVVEQGFGKPGDRIIISAGLPLGTPGSTNML 467 (480)
Q Consensus 388 iS~~RP~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~~~g~i~~GD~VVvv~G~p~~~~G~TN~i 467 (480)
+|+|||++||+|+|++++++|||+|+|||+|+++++.++.+++++.|+++++++|++++||.||+|+|+|++.+|+||+|
T Consensus 449 ISr~RP~~PIiAvT~~~~taRqL~L~wGV~Pi~~~~~~~~d~~i~~a~~~lk~~g~ik~GD~VVvvaG~p~~~~G~TN~l 528 (534)
T 3ma8_A 449 ISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNSIHHSEVVISNALALAKEESLIESGDFAIAVHGVKESCPGSCNLM 528 (534)
T ss_dssp HHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECSCCSCHHHHHHHHHHHHHHTTSCCTTCEEEEEECC-------CCEE
T ss_pred HHHHCCCCCEEEECCCHHHHHHHHEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEE
T ss_conf 99559799889985988999750350783799917889999999999999998699899798999937669989765259
Q ss_pred EEEEEC
Q ss_conf 999945
Q gi|254780442|r 468 RIAYIG 473 (480)
Q Consensus 468 rv~~Vg 473 (480)
||++|+
T Consensus 529 rV~~Vp 534 (534)
T 3ma8_A 529 KIVRCP 534 (534)
T ss_dssp EEEECC
T ss_pred EEEECC
T ss_conf 999788
No 4
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, structural genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=0 Score=1119.08 Aligned_cols=469 Identities=29% Similarity=0.500 Sum_probs=447.3
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCEEEEEECC
Q ss_conf 777526999418775799999999973997899988888989999999999999997-4992799998789867886548
Q gi|254780442|r 3 NLRRIKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELR-SRRPIGILIDLQGPKFRVGKFA 81 (480)
Q Consensus 3 ~mrktKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~-~~~~i~Il~Dl~GpkiR~g~~~ 81 (480)
+||||||||||||||++++.|++|+++|||+||||||||++++|.+++++||++.++ .+++|+||+||||||||||.|+
T Consensus 34 ~~rrTKIIaTiGPss~~~e~l~~L~~aG~dv~RiN~SHg~~e~~~~~i~~iR~a~~~~~~~~v~Il~Dl~GpkIRtg~~~ 113 (511)
T 3gg8_A 34 TAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPEARLAILLDTKGPEIRTGFLK 113 (511)
T ss_dssp TTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTTCCCEEEEECCCCCCBBCC--
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECC
T ss_conf 78886299824888699899999998699999998899999999999999999998558997599995889856899737
Q ss_pred C-CCEEECCCCEEEEECC-CCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEECCCCC
Q ss_conf 9-8189658999999532-4556444221266442221133652674068422102344541124551388087114564
Q gi|254780442|r 82 N-SKVDLTEGQIFTLDNK-DSLGSSDRVMLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKVIAGISIADRKGI 159 (480)
Q Consensus 82 ~-~~i~l~~G~~v~l~~~-~~~~~~~~i~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgv 159 (480)
+ ++++|++|++++|+.+ +..++.+.++++|+++++.+++||.|++|||++.|+|++++++.+.|+|++||.|+++||+
T Consensus 114 ~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~l~~~vk~Gd~I~idDG~i~l~V~~~~~~~v~~~v~~~G~l~~~Kgv 193 (511)
T 3gg8_A 114 DHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERKNM 193 (511)
T ss_dssp ---CEEECTTCEEEEESCTTCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEESSCEEECSSCBE
T ss_pred CCCEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEEEEEECCCEEEECCCCCCCCCCCEE
T ss_conf 99537845898899955886679867798631433223578988998189558999984021000100245445775121
Q ss_pred CCCCCCCCCCCCCHHHHHH-HHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 4678544555676556778-9988734885325058557734799999862003--433555327856631178887533
Q gi|254780442|r 160 SFPDTFLTTQALTQKDRED-LHAALQTCEVDWVALSFIQSADDLLEIRKIISQN--KIGLMSKIEKPRAIEYASEIIQLS 236 (480)
Q Consensus 160 nip~~~i~l~~ltekD~~d-i~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~--~~~IiaKIE~~~al~nl~eI~~~s 236 (480)
|+|+..+++|+||++|++| |+||++ +++|||++||||+++||.++|+++.+. +++||||||+++|++||+||+++|
T Consensus 194 n~p~~~~~~~~ltekD~~~~i~~a~~-~~vd~ialSFv~s~~dv~~~r~~l~~~~~~~~iiaKIE~~~a~~nl~eI~~~s 272 (511)
T 3gg8_A 194 NLPNVKVQLPVIGEKDKHDILNFGIP-MGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEA 272 (511)
T ss_dssp ECTTCCCCSCSSCHHHHHHHHHTTTT-TTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHHC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHH-CCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHC
T ss_conf 26875235666555637899999987-19999997687847888999999985798068999533487776379898738
Q ss_pred HEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 12475222200215876736899999999851398399805767888828898403477899998519968998144435
Q gi|254780442|r 237 DAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETAS 316 (480)
Q Consensus 237 DgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~ 316 (480)
|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||+
T Consensus 273 DgimIaRGDLg~ei~~e~vp~~Qk~Ii~~~~~~~kpvivATqmLeSM~~~~~PTRAEv~Dvanav~dG~D~vmLs~ETa~ 352 (511)
T 3gg8_A 273 DGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETAN 352 (511)
T ss_dssp SCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHT
T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 78999767631438988958999999999998099299820779999748977406588999999817857887466445
Q ss_pred CCCHHHHHHHHHHHHHHHHCCHHHHHHHH--HHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCC
Q ss_conf 44658999999998876301012444444--3203878888789999999986104786899970883799999841888
Q gi|254780442|r 317 GSYPVDAVRTMSLVASSAERDSSWLEMRS--LRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGLRAARERPK 394 (480)
Q Consensus 317 G~yP~~~v~~~~~i~~~~E~~~~~~~~~~--~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS~~RP~ 394 (480)
|+||+++|++|++||++||++.++..... ........+..+++|.+|+++|++++|++||+||+||+||+++|+|||+
T Consensus 353 G~~P~~~V~~~~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aAv~~A~~l~akaIVv~T~SG~TA~~iS~~RP~ 432 (511)
T 3gg8_A 353 GEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQEAVARAAVETAECVNAAIILALTETGQTARLIAKYRPM 432 (511)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCC
T ss_conf 76767999999999999984434476777765406885306999999999998536998899987986799999953979
Q ss_pred CCEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEE
Q ss_conf 869999299899987666539379993687999999999999999888877887799985222788886415999994
Q gi|254780442|r 395 LEIIALSPMIQTARRLALVWGIHCVVTEDASDSDDMVNRACRIVVEQGFGKPGDRIIISAGLPLGTPGSTNMLRIAYI 472 (480)
Q Consensus 395 ~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~~~g~i~~GD~VVvv~G~p~~~~G~TN~irv~~V 472 (480)
+||||+|++++++|||+|+|||+|+++++..+.++++..|+++++++|++++||.||+|+|+|++.+|+||+|||++|
T Consensus 433 ~PIia~T~~~~~aR~L~L~wGV~p~~~~~~~~~e~~i~~a~~~l~e~g~v~~GD~vVv~~G~p~~~~G~TN~irV~~V 510 (511)
T 3gg8_A 433 QPILALSASESTIKHLQVIRGVTTMQVPSFQGTDHVIRNAIVVAKERELVTEGESIVAVHGMKEEVAGSSNLLKVLTV 510 (511)
T ss_dssp SCEEEEESCHHHHHHGGGSTTEEEEECCC--CHHHHHHHHHHHHHHTTSCCTTCEEEEEEEC------CCEEEEEEEC
T ss_pred CCEEEECCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEE
T ss_conf 988998798899998561178699992788999999999999999869989979899982666998986738999997
No 5
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=0 Score=1120.46 Aligned_cols=465 Identities=30% Similarity=0.493 Sum_probs=444.4
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCC
Q ss_conf 77526999418775799999999973997899988888989999999999999997499279999878986788654898
Q gi|254780442|r 4 LRRIKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELRSRRPIGILIDLQGPKFRVGKFANS 83 (480)
Q Consensus 4 mrktKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkiR~g~~~~~ 83 (480)
||||||||||||||++++.|++|+++|||+||||||||++++|.++++++|+++++.+++++||+||||||+|||.++++
T Consensus 1 mrrTKIiaTiGPas~~~e~i~~li~aG~~v~RiN~SHgt~e~~~~~i~~ir~~~~~~~~~v~I~~Dl~GpkiRtg~~~~~ 80 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGG 80 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCEEBCCBGGG
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCC
T ss_conf 98864999547886999999999987999999989999999999999999999997099817999689986479873699
Q ss_pred -CEEECCCCEEEEECCC-CCCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEECCCCCCC
Q ss_conf -1896589999995324-55644422126644222113365267406842210234454112455138808711456446
Q gi|254780442|r 84 -KVDLTEGQIFTLDNKD-SLGSSDRVMLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKVIAGISIADRKGISF 161 (480)
Q Consensus 84 -~i~l~~G~~v~l~~~~-~~~~~~~i~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvni 161 (480)
+++|++|+++.|+.+. ..++++.++++|+++++.+++||.|++|||++.|+|++++++.+.|+|++||.|+++||+|+
T Consensus 81 ~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~I~idDG~i~l~V~~~~~~~i~~~v~~~G~l~~~Kgvni 160 (470)
T 1e0t_A 81 NDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL 160 (470)
T ss_dssp CCEEECTTCEEEEESCTTCCBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTEEEEEECSCEEECSSCEEEC
T ss_pred CEEEECCCCEEEEECCCCCCCCCCEEEECCHHHHHHCCCCCEEEEECCEEEEEEEECCCCEEEEEEEECEEECCCCEEEC
T ss_conf 75896389999995688768977789844088797568998899977869999973248889999962829628971642
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCC---CCEEEEEECCHHHHHHHHHHHHHHHE
Q ss_conf 785445556765567789988734885325058557734799999862003---43355532785663117888753312
Q gi|254780442|r 162 PDTFLTTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQN---KIGLMSKIEKPRAIEYASEIIQLSDA 238 (480)
Q Consensus 162 p~~~i~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~---~~~IiaKIE~~~al~nl~eI~~~sDg 238 (480)
||..+++|+||++|++||+||+++ ++|||++||||+++||+++|+++.+. +++||||||+++|++||+||+++|||
T Consensus 161 p~~~~~~~~ltekD~~~i~~~~~~-~vd~i~lSfV~~~~dv~~~r~~l~~~~~~~~~iiaKIE~~~al~nl~eI~~~sDg 239 (470)
T 1e0t_A 161 PGVSIALPALAEKDKQDLIFGCEQ-GVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDG 239 (470)
T ss_dssp SSCCCCCCSSCHHHHHHHHHHHHH-TCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCC-CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCE
T ss_conf 897556644638789988611015-9764410356866788888766776157663479885269999879999975757
Q ss_pred EEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 47522220021587673689999999985139839980576788882889840347789999851996899814443544
Q gi|254780442|r 239 VMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGS 318 (480)
Q Consensus 239 imiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~ 318 (480)
|||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||+|+
T Consensus 240 imiaRGDLg~e~~~e~vp~~Qk~Ii~~~~~~~kpvi~ATq~LeSM~~~~~PTRAEv~Dv~nav~dGad~vmLs~ETa~G~ 319 (470)
T 1e0t_A 240 IMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGK 319 (470)
T ss_dssp EEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC-----
T ss_pred EEEECCCCHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 89965660100898887899999999998659988981677887631899863457889999981676687736645775
Q ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCEE
Q ss_conf 65899999999887630101244444432038788887899999999861047868999708837999998418888699
Q gi|254780442|r 319 YPVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGLRAARERPKLEII 398 (480)
Q Consensus 319 yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS~~RP~~pIi 398 (480)
||++||++|++||++||++.++.... .......++++++|.+|+++|++++|++||+||+||+||+++|||||++||+
T Consensus 320 ~P~~~v~~~~~i~~~aE~~~~~~~~~--~~~~~~~~~~~aia~aAv~lA~~~~AkaIvv~T~SG~tA~~vS~~RP~~PIi 397 (470)
T 1e0t_A 320 YPLEAVSIMATICERTDRVMNSRLEF--NNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATIL 397 (470)
T ss_dssp -CHHHHHHHHHHHHHHHTTCCCCCC-----------CHHHHHHHHHHHHHHTTCSBEEEECSSSHHHHHHHTTCCSSBEE
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCHH--CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEE
T ss_conf 78899999999999986313332100--1356678810778999999987407777999959718999998359799999
Q ss_pred EEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEE
Q ss_conf 99299899987666539379993687999999999999999888877887799985222788886415999994
Q gi|254780442|r 399 ALSPMIQTARRLALVWGIHCVVTEDASDSDDMVNRACRIVVEQGFGKPGDRIIISAGLPLGTPGSTNMLRIAYI 472 (480)
Q Consensus 399 aiT~~~~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~~~g~i~~GD~VVvv~G~p~~~~G~TN~irv~~V 472 (480)
|+|++++++|||+|+|||+|+++++..+.+++++.|.++++++|++++||.||+++|+|.+ +|+||++||+.|
T Consensus 398 avT~~~~~~r~L~L~~GV~p~~~~~~~~~e~~i~~a~~~~~~~g~~~~GD~vVvvsG~~~~-~G~tN~i~V~~v 470 (470)
T 1e0t_A 398 ALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVP-SGTTNTASVHVL 470 (470)
T ss_dssp EEESCHHHHHHGGGSTTEEEEECSCCCSHHHHHHHHHHHHHHTSSSCTTCEEEEEECSSSC-TTCCCEEEEEEC
T ss_pred EECCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC-CCCCEEEEEEEC
T ss_conf 9889889998864307759998088899999999999999976999998989999178789-988878999989
No 6
>3khd_A Pyruvate kinase; malaria, structural genomics, structural genomics consortium, SGC; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=0 Score=1122.04 Aligned_cols=470 Identities=33% Similarity=0.501 Sum_probs=448.4
Q ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH-HCCCCEEEEEECCCCEEEEEEC
Q ss_conf 777752699941877579999999997399789998888898999999999999999-7499279999878986788654
Q gi|254780442|r 2 VNLRRIKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVEL-RSRRPIGILIDLQGPKFRVGKF 80 (480)
Q Consensus 2 ~~mrktKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~-~~~~~i~Il~Dl~GpkiR~g~~ 80 (480)
|+.|||||||||||||++++.|++|+++|||+||||||||+++||+++++++|++.+ +.+++++||+||||||+|||.+
T Consensus 43 ~~~RkTKIiaTiGPas~~~e~l~~li~aG~dv~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~~v~Il~Dl~GpkiRtg~~ 122 (520)
T 3khd_A 43 LRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPNCLLGMLLDTKGPEIRTGFL 122 (520)
T ss_dssp GGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSSCCCEEEEECCCCCEEBCEE
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEC
T ss_conf 76778749983488879999999999869999999899999999999999999998745899338999788984478753
Q ss_pred CCCCEEECCCCEEEEECCC-CCCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEECCCCC
Q ss_conf 8981896589999995324-556444221266442221133652674068422102344541124551388087114564
Q gi|254780442|r 81 ANSKVDLTEGQIFTLDNKD-SLGSSDRVMLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKVIAGISIADRKGI 159 (480)
Q Consensus 81 ~~~~i~l~~G~~v~l~~~~-~~~~~~~i~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgv 159 (480)
++++++|++|++++|+.++ ..++++.++++|+++++.+++||.|++|||++.|+|.+++++.+.|+|++||.|+++||+
T Consensus 123 ~~~~i~l~~G~~v~l~~~~~~~~~~~~i~v~~~~l~~~vk~Gd~I~idDG~i~l~V~~~~~~~i~~~V~~gG~L~s~Kgv 202 (520)
T 3khd_A 123 KNKEVHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETHEDHVITEVLNSAVIGERKNM 202 (520)
T ss_dssp C-----------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEECSSCEEEEECC-CCCCSSCEE
T ss_pred CCCCEEECCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEEECCEECCCCEE
T ss_conf 79838966899999985886689865686224432233799988998478626999970588069999328684688558
Q ss_pred CCCCCCCCCCCCCHHHHHHH-HHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 46785445556765567789-988734885325058557734799999862003--433555327856631178887533
Q gi|254780442|r 160 SFPDTFLTTQALTQKDREDL-HAALQTCEVDWVALSFIQSADDLLEIRKIISQN--KIGLMSKIEKPRAIEYASEIIQLS 236 (480)
Q Consensus 160 nip~~~i~l~~ltekD~~di-~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~--~~~IiaKIE~~~al~nl~eI~~~s 236 (480)
|+|+..+++|+||++|++++ +||+++ ++|||++||||+++||+++|+++++. +++||||||+++|++|||||+++|
T Consensus 203 n~p~~~~~~~~ltekd~~~~~~~a~~~-~vD~ialSfV~s~~di~~~r~~l~~~g~~~~IiaKIE~~~al~nl~eI~~~s 281 (520)
T 3khd_A 203 NLPNVKVDLPIISEKDKNDILNFAIPM-GCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAES 281 (520)
T ss_dssp ECTTSCCCSCSSCHHHHHHHHHTHHHH-TCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHS
T ss_pred ECCCCCCCCCCCCCCHHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHCC
T ss_conf 505765577766500399999999874-9986753377856778999999997598401254212277665067788508
Q ss_pred HEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 12475222200215876736899999999851398399805767888828898403477899998519968998144435
Q gi|254780442|r 237 DAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETAS 316 (480)
Q Consensus 237 DgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~ 316 (480)
|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||+
T Consensus 282 DgimIaRGDLg~e~~~e~vp~~Qk~Ii~~~~~~~kPvivATqmLeSM~~~p~PTRAEv~Dvanav~dG~D~vmLs~ETa~ 361 (520)
T 3khd_A 282 DGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAG 361 (520)
T ss_dssp SCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHS
T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 88999888502018998956989999999997299699987689988628877533478788887626747997356568
Q ss_pred CCCHHHHHHHHHHHHHHHHCCHHHHHHH--HHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCC
Q ss_conf 4465899999999887630101244444--43203878888789999999986104786899970883799999841888
Q gi|254780442|r 317 GSYPVDAVRTMSLVASSAERDSSWLEMR--SLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGLRAARERPK 394 (480)
Q Consensus 317 G~yP~~~v~~~~~i~~~~E~~~~~~~~~--~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS~~RP~ 394 (480)
|+||+++|++|++||++||++.++.... .......+.+..+++|.+|+++|++++|++||+||+||+||+++|+|||+
T Consensus 362 G~~P~~~V~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aIa~aA~~lA~~l~akaIVv~T~SG~TAr~vSr~RP~ 441 (520)
T 3khd_A 362 GKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARSAVETAESIQASLIIALTETGYTARLIAKYKPS 441 (520)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCC
T ss_conf 86899999999999999983443345567654114577537999999999998746999999988985899999954979
Q ss_pred CCEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEE
Q ss_conf 869999299899987666539379993687999999999999999888877887799985222788886415999994
Q gi|254780442|r 395 LEIIALSPMIQTARRLALVWGIHCVVTEDASDSDDMVNRACRIVVEQGFGKPGDRIIISAGLPLGTPGSTNMLRIAYI 472 (480)
Q Consensus 395 ~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~~~g~i~~GD~VVvv~G~p~~~~G~TN~irv~~V 472 (480)
+||+|+|++.+++|||+|+|||+|+++++..+.++++..++++++++|++++||.||+|+|+|+|.+|+||+|||++|
T Consensus 442 ~PIiavT~~~~~aR~L~L~wGV~pi~~~~~~~~e~~i~~a~~~lk~~g~~~~GD~VVvvaG~p~g~~G~TN~irV~~V 519 (520)
T 3khd_A 442 CTILALSASDSTVKCLNVHRGVTCIKVGSFQGTDIVIRNAIEIAKQRNMAKVGDSVIAIHGIKEEVSGGTNLMKVVQI 519 (520)
T ss_dssp SEEEEEESCHHHHHHGGGSTTEEEEECCSCCCHHHHHHHHHHHHHHTTSSCTTCEEEEEEC-CCSSTTCEEEEEEEEC
T ss_pred CCEEEECCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEE
T ss_conf 998998698899987553178389983888999999999999999869999979899982767998876648999997
No 7
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3e0w_A 3e0v_A
Probab=100.00 E-value=0 Score=1117.16 Aligned_cols=469 Identities=31% Similarity=0.476 Sum_probs=444.0
Q ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECC
Q ss_conf 77775269994187757999999999739978999888889899999999999999974992799998789867886548
Q gi|254780442|r 2 VNLRRIKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELRSRRPIGILIDLQGPKFRVGKFA 81 (480)
Q Consensus 2 ~~mrktKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkiR~g~~~ 81 (480)
-++|||||||||||||++++.|++|+++|||+||||||||++|+|.+++++||+++++.+++|+||+||||||||||.|.
T Consensus 17 ~~~r~tKIIaTiGPss~~~~~l~~l~~aGv~v~RiN~SHgt~e~~~~~i~~iR~~~~~~~~~v~Il~Dl~GpkIRtg~~~ 96 (499)
T 3hqn_D 17 ANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTGQFV 96 (499)
T ss_dssp CSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCCCBBCCBG
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEC
T ss_conf 56888729983288879999999999879989999899999999999999999999983998389998999845776736
Q ss_pred CCCEEECCCCEEEEECCCC---CCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCC-EEEEEECCCCEEECCC
Q ss_conf 9818965899999953245---56444221266442221133652674068422102344541-1245513880871145
Q gi|254780442|r 82 NSKVDLTEGQIFTLDNKDS---LGSSDRVMLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIG-FIKCKVIAGISIADRK 157 (480)
Q Consensus 82 ~~~i~l~~G~~v~l~~~~~---~~~~~~i~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~-~i~c~V~~gG~l~s~K 157 (480)
++++.|++|+.+.|+.++. .++++.++++|+++++.+++||.|++|||.+.|+|+++.++ .+.|+|++||.|+++|
T Consensus 97 ~~~i~l~~G~~v~~~~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~I~idDG~i~l~V~~~~~~~~v~~~v~~gG~l~s~K 176 (499)
T 3hqn_D 97 GGDAVMERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQTLECTVTNSHTISDRR 176 (499)
T ss_dssp GGEEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEEETTEEEEEECSCEEEETTC
T ss_pred CCCEEEECCCEEEEECCCCCCCCCCCCEEEECCHHHHHHCCCCCEEEEECCEEEEEEEEECCCCEEEEEEECCEEECCCC
T ss_conf 99789836988999656422458888879625066587648998899845717999997538846999996675853788
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 6446785445556765567789988734885325058557734799999862003--43355532785663117888753
Q gi|254780442|r 158 GISFPDTFLTTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQN--KIGLMSKIEKPRAIEYASEIIQL 235 (480)
Q Consensus 158 gvnip~~~i~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~--~~~IiaKIE~~~al~nl~eI~~~ 235 (480)
|||+||..+++|+||+||++||+||++. ++||||+||||+++||.++|+++.+. +++||||||+++|++||+||+++
T Consensus 177 gvnip~~~~~lp~ltekD~~di~~a~~~-~vD~valSFVrs~~dv~~lr~~l~~~~~~~~iiaKIE~~~a~~nl~eI~~~ 255 (499)
T 3hqn_D 177 GVNLPGCDVDLPAVSAKDRVDLQFGVEQ-GVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEE 255 (499)
T ss_dssp BEECTTSCCCCCSSCHHHHHHHHHHHHT-TCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHH
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf 7966898668644551019999999961-899899668898789999999999719986699996278888648887764
Q ss_pred HHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 31247522220021587673689999999985139839980576788882889840347789999851996899814443
Q gi|254780442|r 236 SDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETA 315 (480)
Q Consensus 236 sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa 315 (480)
||||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||
T Consensus 256 sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~gKpvivATqmLeSM~~~p~PTRAEv~Dvanav~dG~D~vmLs~ETa 335 (499)
T 3hqn_D 256 SDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETA 335 (499)
T ss_dssp SSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHHHH
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCC
T ss_conf 64899965663232898783899999999999829948961687898875899972778889988870850899746523
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCHHHHHHHH--HHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCC
Q ss_conf 544658999999998876301012444444--320387888878999999998610478689997088379999984188
Q gi|254780442|r 316 SGSYPVDAVRTMSLVASSAERDSSWLEMRS--LRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGLRAARERP 393 (480)
Q Consensus 316 ~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~--~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS~~RP 393 (480)
+|+||+++|++|++||++||++.++..... ........+..+++|.+|+++|++++|++||+||+||+||+++|+|||
T Consensus 336 ~G~~P~~~V~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aIa~aav~~A~~~~akaIvv~T~sG~Ta~~iSk~RP 415 (499)
T 3hqn_D 336 KGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVAKYRP 415 (499)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCC
T ss_conf 57688999999999999998501223443210100257766167799999999872478789998898489999995496
Q ss_pred CCCEEEEECCHHHHHHHHHHCCCEEEEEC-----CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEE
Q ss_conf 88699992998999876665393799936-----8799999999999999988887788779998522278888641599
Q gi|254780442|r 394 KLEIIALSPMIQTARRLALVWGIHCVVTE-----DASDSDDMVNRACRIVVEQGFGKPGDRIIISAGLPLGTPGSTNMLR 468 (480)
Q Consensus 394 ~~pIiaiT~~~~t~r~l~L~~GV~p~~~~-----~~~~~~~~i~~a~~~l~~~g~i~~GD~VVvv~G~p~~~~G~TN~ir 468 (480)
++||+|+|++++++|||+|+|||+|++++ +..+.++++..|+++++++|++++||.||+|+| |++.+|+||+||
T Consensus 416 ~~PIiavT~~~~t~r~L~L~wGV~pil~~~~~~~~~~~~~~~i~~a~~~~~~~g~v~~GD~vVvvsG-~~~~~G~TN~ir 494 (499)
T 3hqn_D 416 NCPIVCVTTRLQTCRQLNITQGVESVFFDADKLGHDEGKEHRVAAGVEFAKSKGYVQTGDYCVVIHA-DHKVKGYANQTR 494 (499)
T ss_dssp SSCEEEEESCHHHHHHGGGSTTEEEEECCHHHHCCCTTCHHHHHHHHHHHHHTTSCCTTCEEEEEEE-CC-----CEEEE
T ss_pred CCCEEEECCCHHHHHHHHECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEC-CCCCCCCCCEEE
T ss_conf 9988998798899987753167589996665566533799999999999998799999899999738-999999773589
Q ss_pred EEEE
Q ss_conf 9994
Q gi|254780442|r 469 IAYI 472 (480)
Q Consensus 469 v~~V 472 (480)
|++|
T Consensus 495 v~~V 498 (499)
T 3hqn_D 495 ILLV 498 (499)
T ss_dssp EEEC
T ss_pred EEEE
T ss_conf 9997
No 8
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transferase; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=0 Score=1108.32 Aligned_cols=469 Identities=32% Similarity=0.484 Sum_probs=440.6
Q ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCEEEEEEC
Q ss_conf 7777526999418775799999999973997899988888989999999999999997-499279999878986788654
Q gi|254780442|r 2 VNLRRIKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELR-SRRPIGILIDLQGPKFRVGKF 80 (480)
Q Consensus 2 ~~mrktKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~-~~~~i~Il~Dl~GpkiR~g~~ 80 (480)
.+||||||||||||||++++.|++|+++|||+||||||||++|||.++++++|++++. .++||+||+||||||+|||.+
T Consensus 16 ~~mrkTKIIaTiGPas~~~e~l~~li~aG~dv~RiN~SHg~~e~~~~~i~~iR~~~~~~~~~~vaIl~Dl~GpkiR~g~~ 95 (500)
T 1a3w_A 16 SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTT 95 (500)
T ss_dssp CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHHCCSSCCCCEEECCCSCCBBCCC
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEC
T ss_conf 45567429982488869989999999879999999899899999999999999999874898579999798986578874
Q ss_pred CCC-CEEECCCCEEEEECCCCC---CCCCCCCCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCC-EEEEEECCCCEEEC
Q ss_conf 898-189658999999532455---6444221266442221133652674068422102344541-12455138808711
Q gi|254780442|r 81 ANS-KVDLTEGQIFTLDNKDSL---GSSDRVMLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIG-FIKCKVIAGISIAD 155 (480)
Q Consensus 81 ~~~-~i~l~~G~~v~l~~~~~~---~~~~~i~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~-~i~c~V~~gG~l~s 155 (480)
+++ ++.|++|+.+.|+.++.. ++.+.++++|+++++.+++||.|++|||.+.|+|+++.++ .+.|+|++||.|++
T Consensus 96 ~~~~~i~l~~g~~v~~~~~~~~~~~~~~~~i~v~~~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~~~~~~v~~~G~l~s 175 (500)
T 1a3w_A 96 TNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVVDDKTLKVKALNAGKICS 175 (500)
T ss_dssp SSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEECCBCCC--CEEEEBCSCCCCCS
T ss_pred CCCCEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHCCCCCEEEEECCCEEEEEEEECCCEEEEEEEEECEEECC
T ss_conf 78976996189989998067446666575796444000100589977996268358999995498189999983749706
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHH
Q ss_conf 45644678544555676556778998873488532505855773479999986200--3433555327856631178887
Q gi|254780442|r 156 RKGISFPDTFLTTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQ--NKIGLMSKIEKPRAIEYASEII 233 (480)
Q Consensus 156 ~Kgvnip~~~i~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~--~~~~IiaKIE~~~al~nl~eI~ 233 (480)
+||+|+||..+++|+||+||++||+||+++ ++||||+||||+++||.++|+++++ .+++||||||+++|++|||||+
T Consensus 176 ~Kgvnip~~~~~~~~ltekD~~di~~~~~~-~~d~ialSFV~s~~dv~~~r~~l~~~~~~~~IiaKIE~~~a~~nl~~I~ 254 (500)
T 1a3w_A 176 HKGVNLPGTDVDLPALSEKDKEDLRFGVKN-GVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEIL 254 (500)
T ss_dssp SCBEECTTCCCCCCSSCHHHHHHHHHHHHH-TCSEEEECSCCSHHHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHHH
T ss_pred CCCCCCCCEECCCCCCCHHHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHH
T ss_conf 875555630036755762309998558761-9878984576745679999999997099716999852688887369988
Q ss_pred HHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf 53312475222200215876736899999999851398399805767888828898403477899998519968998144
Q gi|254780442|r 234 QLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAE 313 (480)
Q Consensus 234 ~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~E 313 (480)
++||||||||||||+|+|+|+||.+||+||++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|
T Consensus 255 ~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvi~ATqmLeSM~~~p~PTRAEv~Dvanav~dG~d~vmLs~E 334 (500)
T 1a3w_A 255 KVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGE 334 (500)
T ss_dssp HHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTT
T ss_pred HHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 43766999888631328977725999999999998399299921578988638877328888898888618727996231
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH--HHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 43544658999999998876301012444444--3203878888789999999986104786899970883799999841
Q gi|254780442|r 314 TASGSYPVDAVRTMSLVASSAERDSSWLEMRS--LRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGLRAARE 391 (480)
Q Consensus 314 Ta~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~--~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS~~ 391 (480)
||+|+||+++|++|++||++||++.++..... ......+.+..+++|.+|+++|++++|++||+||+||+||+++|+|
T Consensus 335 Ta~G~~P~~~v~~~~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~sAv~~A~~~~akaIVv~T~SG~tA~~iSk~ 414 (500)
T 1a3w_A 335 TAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSKY 414 (500)
T ss_dssp TTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHTCSCEEEECSSSHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
T ss_conf 01575779999999999999874211010145554216788867999999999998715788899997972899999955
Q ss_pred CCCCCEEEEECCHHHHHHHHHHCCCEEEEECC------CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCC
Q ss_conf 88886999929989998766653937999368------799999999999999988887788779998522278888641
Q gi|254780442|r 392 RPKLEIIALSPMIQTARRLALVWGIHCVVTED------ASDSDDMVNRACRIVVEQGFGKPGDRIIISAGLPLGTPGSTN 465 (480)
Q Consensus 392 RP~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~------~~~~~~~i~~a~~~l~~~g~i~~GD~VVvv~G~p~~~~G~TN 465 (480)
||++||||+|++++++|||+|+|||+|++++. .++.+++++.++++++++|++++||.||+++|+|.+ +|+||
T Consensus 415 RP~~PIia~T~~~~~~R~L~L~wGV~pil~~~~~~~~~~~~~e~~i~~a~~~l~~~g~v~~GD~vVvv~G~~~~-~g~TN 493 (500)
T 1a3w_A 415 RPNCPIILVTRCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGILKKGDTYVSIQGFKAG-AGHSN 493 (500)
T ss_dssp CCSSCEEEEESCTTHHHHGGGSTTEEEEECCSCCCSCTTTHHHHHHHHHHHHHHHTTCSCTTCEEEEEECCCTT-TCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC-CCCCE
T ss_conf 97999999869989998753406738999546577760566999999999999976999998989999377489-98675
Q ss_pred EEEEEEE
Q ss_conf 5999994
Q gi|254780442|r 466 MLRIAYI 472 (480)
Q Consensus 466 ~irv~~V 472 (480)
+|||++|
T Consensus 494 ~irV~~V 500 (500)
T 1a3w_A 494 TLQVSTV 500 (500)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
T ss_conf 8999979
No 9
>1izc_A Macrophomate synthase intermolecular diels- alderase; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=98.95 E-value=8.7e-09 Score=82.91 Aligned_cols=143 Identities=16% Similarity=0.239 Sum_probs=96.2
Q ss_pred HHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHH----------------------------------CCCCEEEEEE
Q ss_conf 677899887348853250585577347999998620----------------------------------0343355532
Q gi|254780442|r 175 DREDLHAALQTCEVDWVALSFIQSADDLLEIRKIIS----------------------------------QNKIGLMSKI 220 (480)
Q Consensus 175 D~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~----------------------------------~~~~~IiaKI 220 (480)
|...|+.+++. +++-|-+.+|+++++.+.+-+.+. ..++.+++.|
T Consensus 106 ~~~~i~~~LD~-Ga~GIivP~V~s~eeA~~~V~a~rypP~G~Rg~~~~~~~~g~~~~~~~~~~~~y~~~~n~~~~vi~qI 184 (339)
T 1izc_A 106 DEVSLSTALDA-GAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQI 184 (339)
T ss_dssp CHHHHHHHHHH-TCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEE
T ss_pred CHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCEEECC
T ss_conf 87999999717-99989977869999999999974028888867676533344331111276467899875413330003
Q ss_pred CCHHHHHHHHHHHHH--HHEEEEECCCCCHHCCH-----------HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCC
Q ss_conf 785663117888753--31247522220021587-----------67368999999998513983998057678888288
Q gi|254780442|r 221 EKPRAIEYASEIIQL--SDAVMVARGDLGVEMAL-----------ELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSP 287 (480)
Q Consensus 221 E~~~al~nl~eI~~~--sDgimiaRGDLg~e~~~-----------e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p 287 (480)
|+++|++|+|||+.. .|+++|..+||+..+++ .++-.+.++|++.|+++|||+.+.+.-.
T Consensus 185 Et~~av~nldeI~av~GVD~i~iGp~DLs~slG~p~~~~~g~~~~p~v~~Ai~~i~~aa~~~Gk~~g~~~~~~------- 257 (339)
T 1izc_A 185 ESVKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGALSV------- 257 (339)
T ss_dssp CSHHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEECSSG-------
T ss_pred CCHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCH-------
T ss_conf 7789999899986326875699770688985699866657888998999999999999998699579706999-------
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEECCCCCC-CCCHHHHHHHHHHHHH
Q ss_conf 98403477899998519968998144435-4465899999999887
Q gi|254780442|r 288 FPTRAEVSDVATAVFEEADAIMLSAETAS-GSYPVDAVRTMSLVAS 332 (480)
Q Consensus 288 ~PTRaEv~Dvanav~dG~D~imLs~ETa~-G~yP~~~v~~~~~i~~ 332 (480)
.++...+..|++-|.++..+.. .+.-.+.++.++....
T Consensus 258 -------~~~~~~i~~G~~~v~~g~D~~~L~~~~~~~l~~~r~~~~ 296 (339)
T 1izc_A 258 -------DMVPSLIEQGYRAIAVQFDVWGLSRLVHGSLAQARASAK 296 (339)
T ss_dssp -------GGHHHHHHTTEEEEEEEEHHHHHHHHHHHHHHHHHHHHG
T ss_pred -------HHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -------999999983998999728999999999999999999998
No 10
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic degradation; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=98.76 E-value=8.7e-08 Score=75.55 Aligned_cols=126 Identities=17% Similarity=0.240 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHC-----------------------------CCCEEEEEECCHH
Q ss_conf 56778998873488532505855773479999986200-----------------------------3433555327856
Q gi|254780442|r 174 KDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQ-----------------------------NKIGLMSKIEKPR 224 (480)
Q Consensus 174 kD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~-----------------------------~~~~IiaKIE~~~ 224 (480)
.|...|+.+++. +++-|-+..|++++|.+++.+.+.- ..+.+++-||+++
T Consensus 99 ~~~~~i~r~LD~-Ga~GIivP~V~s~eea~~~v~~~kypP~G~RG~g~~~~~~~~~~~~~~~~~~~n~~~lvi~qIEt~e 177 (287)
T 2v5j_A 99 NDPVQIKQLLDV-GTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETRE 177 (287)
T ss_dssp SCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHH
T ss_pred CCHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCHH
T ss_conf 999999999837-9986794675999999999983717999989998642334556674067787330248864125599
Q ss_pred HHHHHHHHHHH--HHEEEEECCCCCHHCCH------HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHH
Q ss_conf 63117888753--31247522220021587------67368999999998513983998057678888288984034778
Q gi|254780442|r 225 AIEYASEIIQL--SDAVMVARGDLGVEMAL------ELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSD 296 (480)
Q Consensus 225 al~nl~eI~~~--sDgimiaRGDLg~e~~~------e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~D 296 (480)
|++|+|||+.. -|++++..+||+..+++ +++-.+-+++++.|+++|||+-+.. ++. .+
T Consensus 178 avenldeI~av~GvD~i~iGP~DLS~slG~pg~~~~p~v~~ai~~v~~~~~~~gk~~G~~~-----------~~~---~~ 243 (287)
T 2v5j_A 178 AMKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILI-----------ANE---QL 243 (287)
T ss_dssp HHHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEEC-----------CCH---HH
T ss_pred HHHHHHHHHCCCCCCEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC-----------CCH---HH
T ss_conf 9998999864478876998928887531788899987899999999999998599524757-----------999---99
Q ss_pred HHHHHHCCCCEEEECCCC
Q ss_conf 999985199689981444
Q gi|254780442|r 297 VATAVFEEADAIMLSAET 314 (480)
Q Consensus 297 vanav~dG~D~imLs~ET 314 (480)
+...+.+|+.-+.++.++
T Consensus 244 ~~~~~~~G~~~i~~g~D~ 261 (287)
T 2v5j_A 244 AKRYLELGALFVAVGVDT 261 (287)
T ss_dssp HHHHHHTTCSEEEEEEHH
T ss_pred HHHHHHCCCCEEEEHHHH
T ss_conf 999998399899975899
No 11
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, degradation of homoprotocatechuate, class II aldolase; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=98.74 E-value=1e-07 Score=74.94 Aligned_cols=126 Identities=15% Similarity=0.256 Sum_probs=92.8
Q ss_pred HHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHH-----------------------------CCCCEEEEEECCHHH
Q ss_conf 677899887348853250585577347999998620-----------------------------034335553278566
Q gi|254780442|r 175 DREDLHAALQTCEVDWVALSFIQSADDLLEIRKIIS-----------------------------QNKIGLMSKIEKPRA 225 (480)
Q Consensus 175 D~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~-----------------------------~~~~~IiaKIE~~~a 225 (480)
|...|+.+++. +++-|-+..|+|+++.+++.+.++ ..++.+++.|||.+|
T Consensus 79 ~~~~i~r~LD~-Ga~GIivP~v~s~eea~~~v~~~rypP~G~Rg~~~~~~~~~~~~~~~~y~~~~n~~~~vi~qIEt~~a 157 (267)
T 2vws_A 79 SKPLIKQVLDI-GAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTA 157 (267)
T ss_dssp CHHHHHHHHHT-TCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHH
T ss_pred CHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCHHH
T ss_conf 47999999838-99889989949999999999986069999998876533212467636899999864222020266999
Q ss_pred HHHHHHHHHH--HHEEEEECCCCCHHCCH------HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 3117888753--31247522220021587------673689999999985139839980576788882889840347789
Q gi|254780442|r 226 IEYASEIIQL--SDAVMVARGDLGVEMAL------ELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDV 297 (480)
Q Consensus 226 l~nl~eI~~~--sDgimiaRGDLg~e~~~------e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dv 297 (480)
++|+|||+.. -|+++|..+||++.+++ .++-.+-+++++.|+++|||+-+... +. .++
T Consensus 158 v~nleeI~av~GvD~i~iGp~DLS~slG~pg~~~~p~v~~ai~~v~~~~~~~gk~~G~~~~-----------~~---~~~ 223 (267)
T 2vws_A 158 LDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAV-----------AP---DMA 223 (267)
T ss_dssp HHTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEECS-----------SH---HHH
T ss_pred HHHHHHHHCCCCCCEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCC-----------CH---HHH
T ss_conf 9979987456898535678077887339998899836899999999999986997666379-----------99---999
Q ss_pred HHHHHCCCCEEEECCCCC
Q ss_conf 999851996899814443
Q gi|254780442|r 298 ATAVFEEADAIMLSAETA 315 (480)
Q Consensus 298 anav~dG~D~imLs~ETa 315 (480)
...+..|++-++++.++.
T Consensus 224 ~~~~~~G~~~~~~g~D~~ 241 (267)
T 2vws_A 224 QQCLAWGANFVAVGVDTM 241 (267)
T ss_dssp HHHHHTTCCEEEEEEHHH
T ss_pred HHHHHCCCCEEEEHHHHH
T ss_conf 999974999999628999
No 12
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=98.69 E-value=2.1e-07 Score=72.66 Aligned_cols=126 Identities=14% Similarity=0.204 Sum_probs=94.3
Q ss_pred HHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHH----------------------------CCCCEEEEEECCHHHH
Q ss_conf 677899887348853250585577347999998620----------------------------0343355532785663
Q gi|254780442|r 175 DREDLHAALQTCEVDWVALSFIQSADDLLEIRKIIS----------------------------QNKIGLMSKIEKPRAI 226 (480)
Q Consensus 175 D~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~----------------------------~~~~~IiaKIE~~~al 226 (480)
|...|+.+++. +++-|-+..|+++++.+++.+.+. .+++.+++.||+++|+
T Consensus 80 ~~~~i~~~LD~-Ga~GiivP~V~s~eea~~~v~~~rypP~G~Rg~~~~~~~~~~~~~~~~~~~~n~~~~vi~qIEt~~av 158 (256)
T 1dxe_A 80 EPVIIKRLLDI-GFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGV 158 (256)
T ss_dssp CHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHH
T ss_pred CHHHHHHHHCC-CCCEEEECCCCCHHHHHHHHHHEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCEEHHHHCCHHHH
T ss_conf 99999998718-98977727869999999999745779999878773202221352127899984323410211167899
Q ss_pred HHHHHHHH--HHHEEEEECCCCCHHCCH------HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 11788875--331247522220021587------6736899999999851398399805767888828898403477899
Q gi|254780442|r 227 EYASEIIQ--LSDAVMVARGDLGVEMAL------ELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVA 298 (480)
Q Consensus 227 ~nl~eI~~--~sDgimiaRGDLg~e~~~------e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dva 298 (480)
+|+|||+. .-|+++|..+||++.++. +++-.+-+++++.|+++|||+=+.+ ++. .|..
T Consensus 159 ~nldeI~av~GvD~i~iGp~DLs~slG~~g~~~~p~v~~ai~~v~~~~~~~gk~~G~~~-----------~~~---~~~~ 224 (256)
T 1dxe_A 159 DNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA-----------PVE---ADAR 224 (256)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC-----------CSH---HHHH
T ss_pred HHHHHHHCCCCCCEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC-----------CCH---HHHH
T ss_conf 87888605789852567748898742888898987999999999999998599868827-----------999---9999
Q ss_pred HHHHCCCCEEEECCCCC
Q ss_conf 99851996899814443
Q gi|254780442|r 299 TAVFEEADAIMLSAETA 315 (480)
Q Consensus 299 nav~dG~D~imLs~ETa 315 (480)
-.+-.|++-+.++.++.
T Consensus 225 ~~~~~G~~~i~~g~D~~ 241 (256)
T 1dxe_A 225 RYLEWGATFVAVGSDLG 241 (256)
T ss_dssp HHHHTTCCEEEEEEHHH
T ss_pred HHHHHCCCEEEEHHHHH
T ss_conf 99981999999579999
No 13
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=97.71 E-value=0.00015 Score=51.58 Aligned_cols=137 Identities=12% Similarity=0.166 Sum_probs=97.8
Q ss_pred CHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHHH--EEEEECCCCC
Q ss_conf 65567789988734885325058557734799999862003--4335553278566311788875331--2475222200
Q gi|254780442|r 172 TQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQN--KIGLMSKIEKPRAIEYASEIIQLSD--AVMVARGDLG 247 (480)
Q Consensus 172 tekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~--~~~IiaKIE~~~al~nl~eI~~~sD--gimiaRGDLg 247 (480)
|+.-..|+.. +.. ++|.+.++-+.+++|++.+.+.+.+. +++|++=|||..|+.|+.+|..... ++.+.-.||.
T Consensus 80 t~~~~~Dl~~-l~~-~~~gi~lPK~~~~~~v~~~~~~l~~~~~~~~i~~~iET~~gl~~~~~Ia~~~rv~~l~fG~~Dl~ 157 (284)
T 1sgj_A 80 SPYFEDDLSV-LTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYT 157 (284)
T ss_dssp STTHHHHGGG-CCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHH
T ss_pred CHHHHHHHHH-HHC-CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 4049999998-740-68824540569999999999877640679625314212567864999988777888860630799
Q ss_pred HHCCH------HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH
Q ss_conf 21587------673689999999985139839980576788882889840347789999851996899814443544658
Q gi|254780442|r 248 VEMAL------ELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPV 321 (480)
Q Consensus 248 ~e~~~------e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~ 321 (480)
.+++. ..+..+..+++..|+.+|.+.|-.- ..+ ..++---+ .++..+-..|.+|-+. =||.
T Consensus 158 ~~lg~~~~~~~~~l~~~r~~i~~aa~a~g~~~id~~-~~~--~~d~~gl~---~~~~~~r~~Gf~GK~~-------IHP~ 224 (284)
T 1sgj_A 158 TDLGGKRTPGGLEVLYARSQVALAARLTGVAALDIV-VTA--LNDPETFR---ADAEQGRALGYSGKLC-------IHPA 224 (284)
T ss_dssp HHHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEECC-CCC--CSCHHHHH---HHHHHHHHTTCSEEEE-------SSHH
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC-CCC--CCCHHHHH---HHHHHHHHCCCCEEEE-------CCHH
T ss_conf 981998871057788888776999998399733665-655--46888999---9999998658460664-------2840
Q ss_pred HH
Q ss_conf 99
Q gi|254780442|r 322 DA 323 (480)
Q Consensus 322 ~~ 323 (480)
+.
T Consensus 225 Qi 226 (284)
T 1sgj_A 225 QV 226 (284)
T ss_dssp HH
T ss_pred HH
T ss_conf 78
No 14
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=97.41 E-value=0.00063 Score=47.06 Aligned_cols=138 Identities=17% Similarity=0.159 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH--EEEEECCCCCHH
Q ss_conf 655677899887348853250585577347999998620034335553278566311788875331--247522220021
Q gi|254780442|r 172 TQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSD--AVMVARGDLGVE 249 (480)
Q Consensus 172 tekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sD--gimiaRGDLg~e 249 (480)
|+...+||..... .++|.|.++-|.+++||..+. +.+|++-|||+.|+.|+.+|...+- ++++.-.||..+
T Consensus 70 t~~~~~Dl~~l~~-~~~dgI~lPKves~~~v~~~~------~~~i~~lIETa~gl~~~~~Ia~~~~~~~l~~G~~Dl~a~ 142 (273)
T 1u5h_A 70 TADQARDLEALAG-TAYTTVMLPKAESAAQVIELA------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIAT 142 (273)
T ss_dssp CHHHHHHHHHHHT-SCCCEEEETTCCCHHHHHTTT------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHHH
T ss_pred CHHHHHHHHHCCC-CCCCEEEECCCCCHHHHHHCC------CCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCHHHHHH
T ss_conf 7608999974335-677556616879989973037------860576412079999999986227442346352156665
Q ss_pred CCHH-----------HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 5876-----------73689999999985139839980576788882889840347789999851996899814443544
Q gi|254780442|r 250 MALE-----------LIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGS 318 (480)
Q Consensus 250 ~~~e-----------~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~ 318 (480)
++.. -+..+--+++-.|+.+|.+.|-.- . .+-.-.-+=-.+...+-..|.+|-+. =
T Consensus 143 lg~~~~~~~~~~~~~~l~~~r~~iv~aara~g~~~id~v-~-----~d~~D~~gl~~~~~~~r~lGf~GK~~-------I 209 (273)
T 1u5h_A 143 LGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALDAV-H-----LDILDVEGLQEEARDAAAVGFDVTVC-------I 209 (273)
T ss_dssp HTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEECC-C-----SCTTCHHHHHHHHHHHHHHTCSEEEE-------S
T ss_pred HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC-C-----CCCCCHHHHHHHHHHHHHCCCCCEEE-------C
T ss_conf 268655445652047899999986788997399877776-6-----67422679999999999807587344-------6
Q ss_pred CHHHHHHHHHHH
Q ss_conf 658999999998
Q gi|254780442|r 319 YPVDAVRTMSLV 330 (480)
Q Consensus 319 yP~~~v~~~~~i 330 (480)
||.++ ...+++
T Consensus 210 HP~Qv-~iin~~ 220 (273)
T 1u5h_A 210 HPSQI-PVVRKA 220 (273)
T ss_dssp SGGGH-HHHHHH
T ss_pred CHHHH-HHHHHH
T ss_conf 81468-999987
No 15
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=97.01 E-value=0.012 Score=37.66 Aligned_cols=133 Identities=14% Similarity=0.067 Sum_probs=95.9
Q ss_pred HCCCCCEECCCCCCCCHHHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHH----HHEEEEECCCCCHHC
Q ss_conf 3488532505855773479999986200---------343355532785663117888753----312475222200215
Q gi|254780442|r 184 QTCEVDWVALSFIQSADDLLEIRKIISQ---------NKIGLMSKIEKPRAIEYASEIIQL----SDAVMVARGDLGVEM 250 (480)
Q Consensus 184 ~~~~vD~ialSfVr~~~di~~~r~~l~~---------~~~~IiaKIE~~~al~nl~eI~~~----sDgimiaRGDLg~e~ 250 (480)
..+..+|+-++-+.+++|++.+-+++.. ..+++++=|||..|+-|++||+.+ .-|+...|+|+...+
T Consensus 200 ~~~~~~yi~lPK~es~~Ev~~~~~l~~~~E~~lgl~~GtIk~~vlIET~~a~~~~~eIl~a~~~rv~gLn~G~~Dy~as~ 279 (528)
T 3cux_A 200 EKGSGPYFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSF 279 (528)
T ss_dssp HTTCCCEEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHH
T ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHH
T ss_conf 05788836734889999999999999997885088888647999733532566279999861311023016778876534
Q ss_pred CH--------------------HHHHHHHHHHHHHHHHCCCEEEE--EHHH--HHHHHHCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 87--------------------67368999999998513983998--0576--788882889840347789999851996
Q gi|254780442|r 251 AL--------------------ELIPGIQKKLIRIARQLGKPVVI--ATQM--LESMVTSPFPTRAEVSDVATAVFEEAD 306 (480)
Q Consensus 251 ~~--------------------e~vp~~Qk~ii~~~~~~~kpviv--ATq~--leSM~~~p~PTRaEv~Dvanav~dG~D 306 (480)
.. .-+-.++..++..|++.|...|- |.++ -+.|..|+.-...=..|...+...|.|
T Consensus 280 ~~~~~~~~~~~l~dR~~~~~~~~~~~ay~~~lv~ac~arg~~aigGmaa~i~~~d~~~~~~~~l~~~r~dk~r~~~~Gfd 359 (528)
T 3cux_A 280 LKAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIGGMAAQIPIKNNPEANEAAFEKVRADKEREALDGHD 359 (528)
T ss_dssp HHHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC-------------------CHHHHHHHHHHHHTCS
T ss_pred HHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHCCCC
T ss_conf 31026688868733443156679999999999999997588644554455778788545799999999999999977998
Q ss_pred EEEECCCCCCCCCHHHH
Q ss_conf 89981444354465899
Q gi|254780442|r 307 AIMLSAETASGSYPVDA 323 (480)
Q Consensus 307 ~imLs~ETa~G~yP~~~ 323 (480)
|-+.- ||-++
T Consensus 360 Gkwvi-------HP~qV 369 (528)
T 3cux_A 360 GTWVA-------HPGLV 369 (528)
T ss_dssp BEEES-------SGGGH
T ss_pred CEEEC-------CCHHH
T ss_conf 40422-------81187
No 16
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.97 E-value=0.013 Score=37.34 Aligned_cols=122 Identities=21% Similarity=0.291 Sum_probs=79.8
Q ss_pred CHHHHHHHHHHHHCCCCCEECCCC--CCCCHHHHHHHHHHHCCCCEEEE-EECCHHHHHHHHHHHHHHHEEEEECCC---
Q ss_conf 655677899887348853250585--57734799999862003433555-327856631178887533124752222---
Q gi|254780442|r 172 TQKDREDLHAALQTCEVDWVALSF--IQSADDLLEIRKIISQNKIGLMS-KIEKPRAIEYASEIIQLSDAVMVARGD--- 245 (480)
Q Consensus 172 tekD~~di~~a~~~~~vD~ialSf--Vr~~~di~~~r~~l~~~~~~Iia-KIE~~~al~nl~eI~~~sDgimiaRGD--- 245 (480)
...|++-++..++. ++|++.+.- -.+...+..++++....++.||+ -+-|.++.++|-+ .-+|+|.|.-|.
T Consensus 103 ~~~~~~~~~~lv~a-gvd~ivID~ahg~~~~~~~~ik~~r~~~~~~vi~GNVaT~e~a~~L~~--aGAD~VkVGiG~Gs~ 179 (361)
T 3khj_A 103 GVNEIERAKLLVEA-GVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIE--NGADGIKVGIGPGSI 179 (361)
T ss_dssp CTTCHHHHHHHHHT-TCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHH--TTCSEEEECSSCCTT
T ss_pred CCCHHHHHHHHHHC-CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHH--CCCCEEEECCCCCCC
T ss_conf 83089999999977-999999928988514899999998602798868655388899999997--199889973406855
Q ss_pred ------CCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf ------002158767368999999998513983998057678888288984034778999985199689981
Q gi|254780442|r 246 ------LGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 246 ------Lg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
.|+-+|- +..+ ...-..|...+.|||-+.-+-.+ .||+-|+--|||+|||.
T Consensus 180 CtTr~~tGvg~pq--~sai-~~~~~~~~~~~vpIIADGGi~~~------------gdi~KAla~GAd~VMlG 236 (361)
T 3khj_A 180 CTTRIVAGVGVPQ--ITAI-EKCSSVASKFGIPIIADGGIRYS------------GDIGKALAVGASSVMIG 236 (361)
T ss_dssp CCHHHHTCBCCCH--HHHH-HHHHHHHHHHTCCEEEESCCCSH------------HHHHHHHHHTCSEEEES
T ss_pred CCCCCCCCCCCCH--HHHH-HHHHHHHCCCCCCEEECCCCCCC------------CHHHHHHHCCCCHHHHC
T ss_conf 5520031557836--8899-99999860478877955883646------------71999987388400005
No 17
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=96.88 E-value=0.0085 Score=38.71 Aligned_cols=140 Identities=15% Similarity=0.160 Sum_probs=98.8
Q ss_pred HHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHC-------------CCCEEEEEECCHHHHHHHHHHHHHHHEEEEE
Q ss_conf 778998873488532505855773479999986200-------------3433555327856631178887533124752
Q gi|254780442|r 176 REDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQ-------------NKIGLMSKIEKPRAIEYASEIIQLSDAVMVA 242 (480)
Q Consensus 176 ~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~-------------~~~~IiaKIE~~~al~nl~eI~~~sDgimia 242 (480)
.++|..|...+++. |.+.||.+.+++.++|+++.+ .++++-.-||+|.+.-.++++++.+|.+-|.
T Consensus 376 lrAilra~~~~~~~-im~Pmv~~~~E~~~~~~~~~~~~~~l~~~g~~~~~~~~~GiMiEvPsaa~~~~~~~~~~DF~SIG 454 (572)
T 2wqd_A 376 LRALLRASVYGKLN-IMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIG 454 (572)
T ss_dssp HHHHHHHTTTSCEE-EEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSEEEEC
T ss_pred HHHHHHHHHCCCCC-EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCEEEEC
T ss_conf 99999976246870-89857586899999999999999987750777777750677703608997099999729699976
Q ss_pred CCCCC------------HHC---C-HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 22200------------215---8-7673689999999985139839980576788882889840347789999851996
Q gi|254780442|r 243 RGDLG------------VEM---A-LELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEAD 306 (480)
Q Consensus 243 RGDLg------------~e~---~-~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D 306 (480)
=-||- +.- | ..-|-..-+.+++.|+++||||=+..||-- +|.- +.-.+--|.+
T Consensus 455 TNDL~Qy~la~DR~n~~v~~~~~~~~Pavlr~i~~~i~~a~~~~~~v~vCGe~a~----dp~~-------~~~L~~lGi~ 523 (572)
T 2wqd_A 455 TNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMAG----DETA-------IPLLLGLGLD 523 (572)
T ss_dssp HHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGGG----CTTT-------HHHHHHHTCC
T ss_pred HHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC----CHHH-------HHHHHHCCCC
T ss_conf 3388888887107871222013888889999999999999976998998189868----9799-------9999976999
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 899814443544658999999998876301
Q gi|254780442|r 307 AIMLSAETASGSYPVDAVRTMSLVASSAER 336 (480)
Q Consensus 307 ~imLs~ETa~G~yP~~~v~~~~~i~~~~E~ 336 (480)
.+=.+ | ..+-.+++.++..+.
T Consensus 524 ~lSv~--------p-~~i~~vk~~i~~~~~ 544 (572)
T 2wqd_A 524 EFSMS--------A-TSILKARRQINGLSK 544 (572)
T ss_dssp EEEEC--------H-HHHHHHHHHHHTCCH
T ss_pred EEEEC--------H-HHHHHHHHHHHHCCH
T ss_conf 89988--------7-889999999996899
No 18
>2ols_A Phosphoenolpyruvate synthase; MCSG, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.40A {Neisseria meningitidis MC58}
Probab=96.83 E-value=0.02 Score=35.99 Aligned_cols=33 Identities=30% Similarity=0.509 Sum_probs=18.8
Q ss_pred HHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEH
Q ss_conf 753312475222200215876736899999999851398399805
Q gi|254780442|r 233 IQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIAT 277 (480)
Q Consensus 233 ~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivAT 277 (480)
+..+.||+.++|...-+. --.|+.+|+|+++..
T Consensus 406 ~~~~~~~~~~~g~~~sh~------------a~~ar~~~~p~~~~~ 438 (794)
T 2ols_A 406 MKRASAIVTNRGGRTCHA------------AIIARELGIPAVVGC 438 (794)
T ss_dssp HHTCSEEEESSCCTTCHH------------HHHTTC---CEEECC
T ss_pred HHHHEEEEEECCCCCCHH------------HHHHHHCCCCEEEEC
T ss_conf 765108989689850179------------999998399989956
No 19
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=96.77 E-value=0.014 Score=37.20 Aligned_cols=118 Identities=19% Similarity=0.275 Sum_probs=78.5
Q ss_pred HHHHHHCCCCCEECCC--CCCCCHHHHHHHHHHHCCCCEEEE-EECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHH-
Q ss_conf 9988734885325058--557734799999862003433555-327856631178887533124752222002158767-
Q gi|254780442|r 179 LHAALQTCEVDWVALS--FIQSADDLLEIRKIISQNKIGLMS-KIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALEL- 254 (480)
Q Consensus 179 i~~a~~~~~vD~ialS--fVr~~~di~~~r~~l~~~~~~Iia-KIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~- 254 (480)
.+...+. ++|++.+. +.-+...+..+|++....++.||+ -+-|.++.++|-+ ..+|+|.|.-|-=++.+.-+.
T Consensus 149 a~~l~~a-Gvd~ivID~Ahg~s~~~~~~ik~~k~~~~v~VIaGNV~T~e~a~~L~~--aGAD~VkVGiG~Gs~CtTr~~t 225 (400)
T 3ffs_A 149 AKLLVEA-GVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIE--NGADGIKVGIGPGSICTTRIVA 225 (400)
T ss_dssp HHHHHHH-TCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHH--TTCSEEEECC---------CCS
T ss_pred HHHHHHC-CCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH--CCCCEEEECCCCCCCCCCCCCC
T ss_conf 9999875-997797546554321067899998863796399942178999999998--0998565403278456665303
Q ss_pred ---HHHHH--HHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf ---36899--9999998513983998057678888288984034778999985199689981
Q gi|254780442|r 255 ---IPGIQ--KKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 255 ---vp~~Q--k~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
+|+++ ...-..|..++.|||-..-+-.| .||+-|+--|||+|||.
T Consensus 226 GvG~Pq~sav~~~a~~~~~~~v~iIADGGi~~~------------GDi~KAla~GAd~VMlG 275 (400)
T 3ffs_A 226 GVGVPQITAIEKCSSVASKFGIPIIADGGIRYS------------GDIGKALAVGASSVMIG 275 (400)
T ss_dssp CBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSH------------HHHHHHHTTTCSEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCC------------CHHHHHHHCCCCHHHHH
T ss_conf 677447999999999998659978953785768------------73999987187353331
No 20
>2bg5_A Enzyme I, phosphoenolpyruvate-protein kinase; phosphotransferase system, thermophilic, bacteria, PEP-utilising enzyme; 1.82A {Thermoanaerobacter tengcongensis}
Probab=96.76 E-value=0.0088 Score=38.59 Aligned_cols=149 Identities=17% Similarity=0.182 Sum_probs=103.1
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHC-------------CCCEEEEEECCHHHHHHHHHHH
Q ss_conf 555676556778998873488532505855773479999986200-------------3433555327856631178887
Q gi|254780442|r 167 TTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQ-------------NKIGLMSKIEKPRAIEYASEII 233 (480)
Q Consensus 167 ~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~-------------~~~~IiaKIE~~~al~nl~eI~ 233 (480)
..|.+...-.++|.-+...+++ .|.+.||++.+++.++|+++.+ ..+++-+-||++.+.-.+++++
T Consensus 116 ~~pel~~~QlrAilra~~~~~l-~Im~PmV~~~~E~~~~~~~~~e~~~~l~~~~~~~~~~~~iG~MiEvPsaal~~~~la 194 (324)
T 2bg5_A 116 DRPDIFKTQLRAILRASAYGNV-QIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILA 194 (324)
T ss_dssp HCHHHHHHHHHHHHHHGGGSCE-EEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHT
T ss_pred CCHHHHHHHHHHHHHHHCCCCC-EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHH
T ss_conf 6789999999999986315995-798506684889999999999999997651476576630322425736799999999
Q ss_pred HHHHEEEEECCCCC-----HHCCH-----------HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 53312475222200-----21587-----------673689999999985139839980576788882889840347789
Q gi|254780442|r 234 QLSDAVMVARGDLG-----VEMAL-----------ELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDV 297 (480)
Q Consensus 234 ~~sDgimiaRGDLg-----~e~~~-----------e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dv 297 (480)
+.+|.+-|.=-||. +.=.- .-+-..-+.++..|++.||||=+..||-. +| .-+
T Consensus 195 ~~~DF~SiGTNDLtQy~la~dR~n~~v~~~~d~~~Pavl~~i~~vv~~a~~~~~~v~iCGE~a~----dp-------~~~ 263 (324)
T 2bg5_A 195 KEVDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEMAG----DP-------LAA 263 (324)
T ss_dssp TTCSEEEECHHHHHHHHTTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEECSGGGG----CH-------HHH
T ss_pred HHCCCCEECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCC----CH-------HHH
T ss_conf 9666102153178778775004773110136888838777899999987525885584467657----86-------899
Q ss_pred HHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 999851996899814443544658999999998876301
Q gi|254780442|r 298 ATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASSAER 336 (480)
Q Consensus 298 anav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~E~ 336 (480)
.-.+--|.|.+=.| | ..|-.++..+++.+.
T Consensus 264 ~~L~~lGi~~lS~s--------p-~~i~~vk~~i~~~~~ 293 (324)
T 2bg5_A 264 VILLGLGLDEFSMS--------A-TSIPEIKNIIRNVEY 293 (324)
T ss_dssp HHHHHHTCCEEEEC--------G-GGHHHHHHHHHTSCH
T ss_pred HHHHHCCCCEEEEC--------H-HHHHHHHHHHHHCCH
T ss_conf 99998499889988--------7-999999999997699
No 21
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A
Probab=96.58 E-value=0.016 Score=36.66 Aligned_cols=126 Identities=16% Similarity=0.166 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHC-------------CCCEEEEEECCHHHHHHHHHHHHHHHEEE
Q ss_conf 56778998873488532505855773479999986200-------------34335553278566311788875331247
Q gi|254780442|r 174 KDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQ-------------NKIGLMSKIEKPRAIEYASEIIQLSDAVM 240 (480)
Q Consensus 174 kD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~-------------~~~~IiaKIE~~~al~nl~eI~~~sDgim 240 (480)
.-...|.-+...+++. |.+.||++.+++.++|+++.. ..+++-+-||++.++-..|++++.+|.+-
T Consensus 372 ~QlrAilra~~~~~l~-im~PmV~~~~E~~~~~~~~~~~~~~l~~~g~~~~~~~~~G~MiEvPsaa~~~~~~~~~~DF~S 450 (575)
T 2hwg_A 372 DQLRAILRASAFGKLR-IMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS 450 (575)
T ss_dssp HHHHHHHHHTTSSCEE-EEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHCCCCE-EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCEEE
T ss_conf 9999999976405851-441356640699999999999999999728876777707899334699997999997496999
Q ss_pred EECCCC------------CHH--C-C-HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCC
Q ss_conf 522220------------021--5-8-76736899999999851398399805767888828898403477899998519
Q gi|254780442|r 241 VARGDL------------GVE--M-A-LELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEE 304 (480)
Q Consensus 241 iaRGDL------------g~e--~-~-~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG 304 (480)
|.=-|| .+. . | ..-|-..-+.+++.|+++|+||=+..||-- +|. -+.-.+--|
T Consensus 451 IGTNDLtQy~la~DR~n~~v~~~~~~~~Pavlr~i~~vi~~a~~~g~~v~iCGe~a~----dp~-------~~~~L~~lG 519 (575)
T 2hwg_A 451 IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAG----DER-------ATLLLLGMG 519 (575)
T ss_dssp ECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECSTTTT----CTT-------THHHHHHTT
T ss_pred ECCCHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCC----CHH-------HHHHHHHCC
T ss_conf 763688888887247980333116867889999999999999970998999588667----989-------999999779
Q ss_pred CCEEEEC
Q ss_conf 9689981
Q gi|254780442|r 305 ADAIMLS 311 (480)
Q Consensus 305 ~D~imLs 311 (480)
.|.+=.|
T Consensus 520 i~~lS~~ 526 (575)
T 2hwg_A 520 LDEFSMS 526 (575)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
T ss_conf 9989988
No 22
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, GMP reductase domain, structural genomics; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=96.46 E-value=0.021 Score=35.79 Aligned_cols=103 Identities=14% Similarity=0.235 Sum_probs=64.4
Q ss_pred CCCCCHHHHHHHHHHHCCCCEEEEE-ECCHHHHHHHHHHHHHHHEEEEE----CCC--CCHHCC----HHHHHHHHHHHH
Q ss_conf 5577347999998620034335553-27856631178887533124752----222--002158----767368999999
Q gi|254780442|r 195 FIQSADDLLEIRKIISQNKIGLMSK-IEKPRAIEYASEIIQLSDAVMVA----RGD--LGVEMA----LELIPGIQKKLI 263 (480)
Q Consensus 195 fVr~~~di~~~r~~l~~~~~~IiaK-IE~~~al~nl~eI~~~sDgimia----RGD--Lg~e~~----~e~vp~~Qk~ii 263 (480)
+..+......++.+.+..++.||+| |-|+++.+.+. -..+|+|.+. ++- ++..+| +.++..+-+...
T Consensus 193 ~~~~~~~~~~i~~~~~~~~vpII~~~v~t~e~A~~l~--~aGad~I~V~g~~~tt~~~~~~g~p~l~ai~eva~a~~~~~ 270 (393)
T 2qr6_A 193 HVNTGGEALNLKEFIGSLDVPVIAGGVNDYTTALHMM--RTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYL 270 (393)
T ss_dssp CCCC-----CHHHHHHHCSSCEEEECCCSHHHHHHHH--TTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH--HCCCCEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 3150468999999974169868983676999999999--76998799846666552233776626889999999999877
Q ss_pred HHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 998513983998057678888288984034778999985199689981
Q gi|254780442|r 264 RIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 264 ~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
......+.|||.+.-+-.+ .||+-|+--|||+|||.
T Consensus 271 ~~~~~~~ipVIADGGIr~g------------~DIaKALAlGAdaVmlG 306 (393)
T 2qr6_A 271 DETGGRYVHIIADGSIENS------------GDVVKAIACGADAVVLG 306 (393)
T ss_dssp HHHTSCCCEEEECSSCCSH------------HHHHHHHHHTCSEEEEC
T ss_pred HHHCCCCCEEEEECCCCCH------------HHHHHHHHCCCCEECCC
T ss_conf 7634688629971698873------------89999998399972025
No 23
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=96.11 E-value=0.088 Score=31.21 Aligned_cols=112 Identities=13% Similarity=0.134 Sum_probs=69.4
Q ss_pred EECCCCCCCCHHHHHHHHHHHC------------CCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCC-----HHC--
Q ss_conf 2505855773479999986200------------343355532785663117888753312475222200-----215--
Q gi|254780442|r 190 WVALSFIQSADDLLEIRKIISQ------------NKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLG-----VEM-- 250 (480)
Q Consensus 190 ~ialSfVr~~~di~~~r~~l~~------------~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg-----~e~-- 250 (480)
.|.+.||++.++++.+|+++.+ .+++|.+-||++.++-..+++++.+|++=|.=-||. +.=
T Consensus 701 ~IM~P~v~~~~E~~~~k~~~~~~~~~l~~~~~~~~~~~vGiMiE~Ps~al~~~~~a~~~Df~SIGTNDLtQ~tlg~DR~n 780 (873)
T 1kbl_A 701 EIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTFGFSRDD 780 (873)
T ss_dssp EEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHHTCCHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHEECCC
T ss_conf 99967889899999999999999999987159998987999984899999999999859889987708888777255787
Q ss_pred -----------------CH-----HHHHHHHHHHHHHHH--HCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
Q ss_conf -----------------87-----673689999999985--139839980576788882889840347789999851996
Q gi|254780442|r 251 -----------------AL-----ELIPGIQKKLIRIAR--QLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEAD 306 (480)
Q Consensus 251 -----------------~~-----e~vp~~Qk~ii~~~~--~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D 306 (480)
|+ .-|-..-+..|..|+ +.|+||-+..|+- .+.| -+--.+..|.|
T Consensus 781 ~~~~~~~y~~~~~~~~dp~~~~d~~aV~~lI~~~i~~~~~~~~g~~v~iCGe~~---------sdp~--~~~~Lv~~Gi~ 849 (873)
T 1kbl_A 781 AGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHG---------GDPS--SVEFCHKVGLN 849 (873)
T ss_dssp HHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSGGG---------GSHH--HHHHHHHTTCS
T ss_pred HHHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC---------CCHH--HHHHHHHCCCC
T ss_conf 023305655530022385100164999999999999987507999899728866---------6999--99999986999
Q ss_pred EEEECC
Q ss_conf 899814
Q gi|254780442|r 307 AIMLSA 312 (480)
Q Consensus 307 ~imLs~ 312 (480)
.+-++.
T Consensus 850 siS~~p 855 (873)
T 1kbl_A 850 YVSCSP 855 (873)
T ss_dssp EEEECG
T ss_pred EEEECH
T ss_conf 899884
No 24
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp}
Probab=95.86 E-value=0.072 Score=31.87 Aligned_cols=134 Identities=13% Similarity=0.007 Sum_probs=84.5
Q ss_pred HHHHHHHHCCCCCEECCCC--CCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCC-HHCCHH
Q ss_conf 7899887348853250585--5773479999986200343355532785663117888753312475222200-215876
Q gi|254780442|r 177 EDLHAALQTCEVDWVALSF--IQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLG-VEMALE 253 (480)
Q Consensus 177 ~di~~a~~~~~vD~ialSf--Vr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg-~e~~~e 253 (480)
+.++.... .++|++.+.. ..+.+-+.++.+...+.++.++.-+.+.+-.+...+. .+|.|.+.-++++ ...+..
T Consensus 92 ~~~~~~~~-~gad~i~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~v~t~~~a~~a~~~--Gad~Igv~~~~~~~~~~~~~ 168 (232)
T 3igs_A 92 DDVDALAQ-AGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCSSVDDGLACQRL--GADIIGTTMSGYTTPDTPEE 168 (232)
T ss_dssp HHHHHHHH-HTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHT--TCSEEECTTTTSSSSSCCSS
T ss_pred HHHHHHHH-CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHC--CCCEEEEECCCCCCCCCCCH
T ss_conf 99988887-3999999972348997899999999975498699986999999999968--99889973577877876703
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 7368999999998513983998057678888288984034778999985199689981444354465899999999887
Q gi|254780442|r 254 LIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVAS 332 (480)
Q Consensus 254 ~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~ 332 (480)
.. -.++..+...+.|||.+.-+-.. .|+..+..-|+|+||+. ||+= .|.+..+...+-++
T Consensus 169 ~~----~~l~~~~~~~~ipvia~GGI~t~------------~d~~~~~~~GAd~V~vG--sAi~-~~~~i~~~~~~ai~ 228 (232)
T 3igs_A 169 PD----LPLVKALHDAGCRVIAEGRYNSP------------ALAAEAIRYGAWAVTVG--SAIT-RLEHICGWYNDALK 228 (232)
T ss_dssp CC----HHHHHHHHHTTCCEEEESCCCSH------------HHHHHHHHTTCSEEEEC--HHHH-CHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHHCCCCEEEEECCCCCH------------HHHHHHHHCCCCEEEEC--HHHC-CHHHHHHHHHHHHH
T ss_conf 67----88999973378239985898999------------99999998699999989--4775-90999999999999
No 25
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, loop-6, purine biosynthesis; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=95.69 E-value=0.13 Score=29.94 Aligned_cols=124 Identities=18% Similarity=0.180 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHCCCCCEECCC--CCCCCHHHHHHHHHHHC-CCCEEEE-EECCHHHHHHHHHHHHHHHEEEEECCCCCH
Q ss_conf 5567789988734885325058--55773479999986200-3433555-327856631178887533124752222002
Q gi|254780442|r 173 QKDREDLHAALQTCEVDWVALS--FIQSADDLLEIRKIISQ-NKIGLMS-KIEKPRAIEYASEIIQLSDAVMVARGDLGV 248 (480)
Q Consensus 173 ekD~~di~~a~~~~~vD~ialS--fVr~~~di~~~r~~l~~-~~~~Iia-KIE~~~al~nl~eI~~~sDgimiaRGDLg~ 248 (480)
+.+.+-....++ .++|++.+- +-.+..-+..+|.+-.. .+..||+ -+-|.++.++|.+ ..+|+|.|.-|-=++
T Consensus 152 ~~~~~r~~~Lv~-agvD~ivID~ahg~s~~~~~~ik~ik~~~p~~~VIaGNV~T~e~a~~L~~--~GAD~VkVGiG~Gs~ 228 (404)
T 1eep_A 152 IDTIERVEELVK-AHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLIS--VGADCLKVGIGPGSI 228 (404)
T ss_dssp TTHHHHHHHHHH-TTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHT--TTCSEEEECSSCSTT
T ss_pred HHHHHHHHHHHH-CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHH--CCCCEEEECCCCCCC
T ss_conf 889999999986-36877751145665588999999999878998677145556999999997--599966752557866
Q ss_pred HCCHHHH----HHHH--HHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 1587673----6899--9999998513983998057678888288984034778999985199689981
Q gi|254780442|r 249 EMALELI----PGIQ--KKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 249 e~~~e~v----p~~Q--k~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
.+.-+.. |+++ ...-..+...+.|||-..-+-.| .||+-|+--|||+|||.
T Consensus 229 CtTr~~tGvG~pq~sAv~~~~~~~~~~~vpIIADGGi~~~------------GDi~KAla~GAdaVMlG 285 (404)
T 1eep_A 229 CTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFS------------GDVVKAIAAGADSVMIG 285 (404)
T ss_dssp SHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSH------------HHHHHHHHHTCSEEEEC
T ss_pred CCCCCEECCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCC------------HHHHHHHHCCCCHHHHC
T ss_conf 5674113555114899999999862468766736886875------------08999997075265534
No 26
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=95.58 E-value=0.054 Score=32.75 Aligned_cols=120 Identities=15% Similarity=0.085 Sum_probs=85.9
Q ss_pred HCCCCCEECCCCCCCCHHHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHH----HEEEEECCCCCHHC
Q ss_conf 3488532505855773479999986200---------3433555327856631178887533----12475222200215
Q gi|254780442|r 184 QTCEVDWVALSFIQSADDLLEIRKIISQ---------NKIGLMSKIEKPRAIEYASEIIQLS----DAVMVARGDLGVEM 250 (480)
Q Consensus 184 ~~~~vD~ialSfVr~~~di~~~r~~l~~---------~~~~IiaKIE~~~al~nl~eI~~~s----DgimiaRGDLg~e~ 250 (480)
+.+.-+|+-++-+.+++|+..+-+++.. ..+++..=|||..|+-|++||+.++ -|+-..|.|+...+
T Consensus 203 ~~g~~~y~ylPKves~~Ea~~~d~lf~~~E~~lGLp~GtIki~vlIET~~a~~n~~EI~~a~~~Rv~gLn~G~~Dy~aS~ 282 (532)
T 3cuz_A 203 AKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSY 282 (532)
T ss_dssp HTTCCCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECCSHHHHHHH
T ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHH
T ss_conf 06898748634889999999999999999997099878358998623167887479999988743311025588876412
Q ss_pred C--------------------HHHHHHHHHHHHHHHHHCCCEEEEE--HHHHHHHHHCCCCCHHHHHH---------HHH
Q ss_conf 8--------------------7673689999999985139839980--57678888288984034778---------999
Q gi|254780442|r 251 A--------------------LELIPGIQKKLIRIARQLGKPVVIA--TQMLESMVTSPFPTRAEVSD---------VAT 299 (480)
Q Consensus 251 ~--------------------~e~vp~~Qk~ii~~~~~~~kpvivA--Tq~leSM~~~p~PTRaEv~D---------van 299 (480)
. ..-+..+++..+..|.+.|.-.+-. .+| |.. ..|.+| -.-
T Consensus 283 i~~~~~~~~~~lpdR~~~~m~~~~~~ay~~l~v~~~~~rga~aigg~aa~i-------p~~-D~~~~~~~~~~~r~dk~r 354 (532)
T 3cuz_A 283 IKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFI-------PSK-DEEHNNQVLNKVKADKSL 354 (532)
T ss_dssp HHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEECBC-------CCS-SGGGCHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-------CCC-CHHHHHHHHHHHHHHHHH
T ss_conf 200144688776543100101458899999999988751023202200377-------768-878899987554678999
Q ss_pred HHHCCCCEEEEC
Q ss_conf 985199689981
Q gi|254780442|r 300 AVFEEADAIMLS 311 (480)
Q Consensus 300 av~dG~D~imLs 311 (480)
...+|.||-+.-
T Consensus 355 e~~~GfdGkWVi 366 (532)
T 3cuz_A 355 EANNGHDGTWIA 366 (532)
T ss_dssp HHHHTCSEEEES
T ss_pred HHHHCCCCEEEE
T ss_conf 998589951773
No 27
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.41 E-value=0.16 Score=29.27 Aligned_cols=125 Identities=20% Similarity=0.255 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHCCCCCEECC--CCCCCCHHHHHHHHHHHC-CCCEEEE-EECCHHHHHHHHHHHHHHHEEEEECCCCCH
Q ss_conf 556778998873488532505--855773479999986200-3433555-327856631178887533124752222002
Q gi|254780442|r 173 QKDREDLHAALQTCEVDWVAL--SFIQSADDLLEIRKIISQ-NKIGLMS-KIEKPRAIEYASEIIQLSDAVMVARGDLGV 248 (480)
Q Consensus 173 ekD~~di~~a~~~~~vD~ial--SfVr~~~di~~~r~~l~~-~~~~Iia-KIE~~~al~nl~eI~~~sDgimiaRGDLg~ 248 (480)
+.+++-.+.-.+. ++|++.+ +.-.+..-+..++++-.. .++.||+ -+-|.++.++|-+ ..+|+|.|.-|-=++
T Consensus 232 ~d~~~Ra~~Lv~a-GvDvivid~Ahg~s~~~~~~i~~i~~~~~~~~viaGNV~t~~~a~~L~~--~Gad~v~VGiG~Gs~ 308 (491)
T 1zfj_A 232 SDTFERAEALFEA-GADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYD--AGVDVVKVGIGPGSI 308 (491)
T ss_dssp TTHHHHHHHHHHH-TCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHH--TTCSEEEECSSCCTT
T ss_pred CCHHHHHHHHHHC-CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHH--HCCHHEEEEEECCCC
T ss_conf 3489999999974-8987999535677632578999987535777637996067999999998--473122520440321
Q ss_pred HCCHHH----HHHHHH--HHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 158767----368999--9999985139839980576788882889840347789999851996899814
Q gi|254780442|r 249 EMALEL----IPGIQK--KLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSA 312 (480)
Q Consensus 249 e~~~e~----vp~~Qk--~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ 312 (480)
.+--+. +|+++- ..-..++.++.|+|--.-+=.| .||+-|+--|||++||.+
T Consensus 309 cttr~~~gvg~pq~tai~~~a~~~~~~~v~IIADGGi~~s------------GDi~KAla~GAd~VMlGs 366 (491)
T 1zfj_A 309 CTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYS------------GDIVKALAAGGNAVMLGS 366 (491)
T ss_dssp BCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSH------------HHHHHHHHTTCSEEEEST
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCC------------HHHHHHHHCCCCHHHHCH
T ss_conf 1461413768861649999999898649828835884752------------189999870785533333
No 28
>1t57_A Conserved protein MTH1675; structural genomics, FMN, methanobacterium thermoautotrophicum, PSI; HET: FMN; 2.30A {Methanothermobacterthermautotrophicus} SCOP: c.49.1.2
Probab=95.24 E-value=0.18 Score=28.90 Aligned_cols=105 Identities=14% Similarity=0.237 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECC------------HHHHHHHHHHCCCEEEE
Q ss_conf 888789999999986104786899970883799999841888869999299------------89998766653937999
Q gi|254780442|r 353 ETGADVISSAARQIAETLRLSAIFCYTASGATGLRAARERPKLEIIALSPM------------IQTARRLALVWGIHCVV 420 (480)
Q Consensus 353 ~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS~~RP~~pIiaiT~~------------~~t~r~l~L~~GV~p~~ 420 (480)
..-++.....|++-|.+++.+.||+.|.||.||+++...-.. .++++|.. +.+.++| -..|+.-+.
T Consensus 33 ~~NT~~tl~la~erA~e~gIk~iVVAStsG~TA~k~~e~~~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L-~~~Gv~V~t 110 (206)
T 1t57_A 33 KENTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTHHAGFREKGQLELEDEARDAL-LERGVNVYA 110 (206)
T ss_dssp GGGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECCCTTSSSTTCCSSCHHHHHHH-HHHTCEEEC
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCC-CEEEEECCCCCCCCCCCCCCHHHHHHH-HHCCCEEEE
T ss_conf 313899999999999986997799971887799999986589-799990646889998342799999999-977988999
Q ss_pred E------------CCC--CCHHHHHHH-----------HH---HHHHHCCCCCCCCEEEEEEEECCC
Q ss_conf 3------------687--999999999-----------99---999988887788779998522278
Q gi|254780442|r 421 T------------EDA--SDSDDMVNR-----------AC---RIVVEQGFGKPGDRIIISAGLPLG 459 (480)
Q Consensus 421 ~------------~~~--~~~~~~i~~-----------a~---~~l~~~g~i~~GD~VVvv~G~p~~ 459 (480)
. +.+ -...+.+.. |+ -.+.+.|++..|+.||.+.|...|
T Consensus 111 ~tH~lSG~eR~is~kfgG~~p~EiiA~tLR~fgqG~KVavEi~lMAaDaGlIp~~eeVIAiGGT~~G 177 (206)
T 1t57_A 111 GSHALSGVGRGISNRFGGVTPVEIMAETLRMVSQGFKVCVEIAIMAADAGLIPVDEEVIAIGGTAWG 177 (206)
T ss_dssp CSCTTTTHHHHHHHHHCSCCHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSSCSSSCEEEEECSSSS
T ss_pred ECCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCC
T ss_conf 5030344134400003797989999999998389747999999875067887899838997766677
No 29
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=94.94 E-value=0.16 Score=29.22 Aligned_cols=51 Identities=22% Similarity=0.249 Sum_probs=28.9
Q ss_pred ECCCCCCCCHHHHHHHHHHHC------------CCCEEEEEECCHHHHHHHHHHHHHHHEEEE
Q ss_conf 505855773479999986200------------343355532785663117888753312475
Q gi|254780442|r 191 VALSFIQSADDLLEIRKIISQ------------NKIGLMSKIEKPRAIEYASEIIQLSDAVMV 241 (480)
Q Consensus 191 ialSfVr~~~di~~~r~~l~~------------~~~~IiaKIE~~~al~nl~eI~~~sDgimi 241 (480)
|.+.||++.+++.++|+++.+ .+.++..-||.+.+.-..|++.+.+|++-|
T Consensus 708 IM~P~v~~~~E~~~~~~~~~~~~~~l~~~~~~~~~~~vg~MiEvPs~al~ad~~a~~~Df~SI 770 (876)
T 1vbg_A 708 IMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSF 770 (876)
T ss_dssp EEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEE
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCEEEE
T ss_conf 997455879999999999999999987303887898599998599999999999986999998
No 30
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=94.85 E-value=0.23 Score=28.15 Aligned_cols=123 Identities=16% Similarity=0.203 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHHHCCCCCEECCCCC--CCCHHHHHHHHHHHC-CCCEEEE-EECCHHHHHHHHHHHHHHHEEEEECCC--
Q ss_conf 6556778998873488532505855--773479999986200-3433555-327856631178887533124752222--
Q gi|254780442|r 172 TQKDREDLHAALQTCEVDWVALSFI--QSADDLLEIRKIISQ-NKIGLMS-KIEKPRAIEYASEIIQLSDAVMVARGD-- 245 (480)
Q Consensus 172 tekD~~di~~a~~~~~vD~ialSfV--r~~~di~~~r~~l~~-~~~~Iia-KIE~~~al~nl~eI~~~sDgimiaRGD-- 245 (480)
.+.|++-.....+ .++|++.+--. .+..-+..++.+-.. .+..||+ -+-|.++.++|-+ ..+|+|-|.-|-
T Consensus 253 ~~~~~era~aLv~-aG~d~iviD~Ahg~s~~v~~~ik~ik~~~~~~~iiaGNVaT~~~~~~L~~--aGad~vkVGiG~Gs 329 (514)
T 1jcn_A 253 REDDKYRLDLLTQ-AGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLID--AGVDGLRVGMGCGS 329 (514)
T ss_dssp STTHHHHHHHHHH-TTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSC
T ss_pred CHHHHHHHHHHHH-CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHH--HCCCEEEEECCCCC
T ss_conf 8527999999985-38977996234512778999999999768997188631236999999998--38888986034676
Q ss_pred -------CCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECC
Q ss_conf -------0021587673689999999985139839980576788882889840347789999851996899814
Q gi|254780442|r 246 -------LGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSA 312 (480)
Q Consensus 246 -------Lg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ 312 (480)
.|+-+|- +- .-...-..++.++.|+|--.-+-.| .||+-|+--|||++||.+
T Consensus 330 ~CtTr~~~GvG~pq--~s-ai~~~a~~~~~~~v~iIADGGi~~~------------GDi~KAla~GAd~VMlGs 388 (514)
T 1jcn_A 330 ICITQEVMACGRPQ--GT-AVYKVAEYARRFGVPIIADGGIQTV------------GHVVKALALGASTVMMGS 388 (514)
T ss_dssp CBTTBCCCSCCCCH--HH-HHHHHHHHHGGGTCCEEEESCCCSH------------HHHHHHHHTTCSEEEEST
T ss_pred CCCCCCCCCCCCCH--HH-HHHHHHHHHHHCCCCEEECCCCCCC------------CHHHHHHHCCCCEEEECC
T ss_conf 65675522347858--99-9999999999759928946880534------------679999871898899670
No 31
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural genomics, joint center for structural genomics, JCSG; 2.18A {Thermotoga maritima MSB8} SCOP: c.1.5.1
Probab=94.70 E-value=0.25 Score=27.87 Aligned_cols=125 Identities=16% Similarity=0.214 Sum_probs=76.2
Q ss_pred CHHHHHHHHHHHHCCCCCEECC--CCCCCCHHHHHHHHHHHC-CCCEEEE-EECCHHHHHHHHHHHHHHHEEEEECCCCC
Q ss_conf 6556778998873488532505--855773479999986200-3433555-32785663117888753312475222200
Q gi|254780442|r 172 TQKDREDLHAALQTCEVDWVAL--SFIQSADDLLEIRKIISQ-NKIGLMS-KIEKPRAIEYASEIIQLSDAVMVARGDLG 247 (480)
Q Consensus 172 tekD~~di~~a~~~~~vD~ial--SfVr~~~di~~~r~~l~~-~~~~Iia-KIE~~~al~nl~eI~~~sDgimiaRGDLg 247 (480)
++.|++-....++. ++|++.+ +.-.+..-++.++.+-.. .++.||+ -+-|.++.++|-+ ..+|+|.|.-|-=+
T Consensus 235 ~~~~~eRa~~Lv~a-GvD~ivID~Ahghs~~~~~~i~~ik~~~~~~~viaGnv~t~~~a~~L~~--aGad~i~VGiG~Gs 311 (494)
T 1vrd_A 235 SPETMERVEKLVKA-GVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIK--AGADAVKVGVGPGS 311 (494)
T ss_dssp STTHHHHHHHHHHT-TCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHH--TTCSEEEECSSCST
T ss_pred CCHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHH--HCCCEEEECCCCCC
T ss_conf 82028999999976-9989999546643799999999999868998679753242999999998--39888885411786
Q ss_pred HHCCHHH--HHHHHHHHHHHH----HHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 2158767--368999999998----513983998057678888288984034778999985199689981
Q gi|254780442|r 248 VEMALEL--IPGIQKKLIRIA----RQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 248 ~e~~~e~--vp~~Qk~ii~~~----~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
+.+--+. +-.-|-..+..| +.++.|+|--.-+=.| .||+-|+--|||++||.
T Consensus 312 ~CtTr~~~g~g~pq~sav~~~~~~~~~~~v~iiADGGi~~~------------gdi~KAla~GAd~VMlG 369 (494)
T 1vrd_A 312 ICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYS------------GDIVKALAAGAESVMVG 369 (494)
T ss_dssp TCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSH------------HHHHHHHHTTCSEEEES
T ss_pred CCCCCCEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCC------------CHHHHHHHHCCCHHHHC
T ss_conf 62262300446217889999999986559669934885766------------66999987277662333
No 32
>3glc_A Aldolase LSRF; TIM barrel, cytoplasm, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli k-12} PDB: 3gnd_A* 3gkf_O
Probab=94.17 E-value=0.32 Score=27.06 Aligned_cols=209 Identities=14% Similarity=0.143 Sum_probs=105.6
Q ss_pred HHHHHHHHC--CCCEEEEEEC------CHHHHHH----HHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 999986200--3433555327------8566311----788875331247522220021587673689999999985139
Q gi|254780442|r 203 LEIRKIISQ--NKIGLMSKIE------KPRAIEY----ASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLG 270 (480)
Q Consensus 203 ~~~r~~l~~--~~~~IiaKIE------~~~al~n----l~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~ 270 (480)
..++.++.. .+.-++| +. ...|+++ ++.+....|++|.-+|=+....+ ...+
T Consensus 42 ~Rl~Rif~~~sGr~viva-~DHG~~~gp~~gle~~~~~i~~~~~g~dai~~~~G~~~~~~~---------------~~~~ 105 (295)
T 3glc_A 42 SRLSRIFNPKTGKTVMLA-FDHGYFQGPTTGLERIDINIAPLFEHADVLMCTRGILRSVVP---------------PATN 105 (295)
T ss_dssp HHHHHHSCTTTSCEEEEE-CCTHHHHCSCTTCTTHHHHTGGGGGGCSEEEECHHHHHHHSC---------------GGGC
T ss_pred HHHHHCCCCCCCCEEEEE-CCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHCC---------------CCCC
T ss_conf 999840639999899997-788863588766443377888885479998878428866232---------------4489
Q ss_pred CEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
Q ss_conf 83998057678888288984034778999985199689981444354465899999999887630101244444432038
Q gi|254780442|r 271 KPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASSAERDSSWLEMRSLRRIE 350 (480)
Q Consensus 271 kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~ 350 (480)
+|.++-..-=.++ ..+.+...=+++|..|+.-|+|++.+.-=. -..+--++++.+.+++.+++.+-.-.-...... .
T Consensus 106 ~~~il~~~~~~~~-~~~~~~~~i~~sVeeAvrlGAdaV~~~v~~-G~~~e~~ml~~~~~~~~~a~~~glpll~~~~~~-~ 182 (295)
T 3glc_A 106 RPVVLRASGANSI-LAELSNEAVALSMDDAVRLNSCAVAAQVYI-GSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVG-K 182 (295)
T ss_dssp CCEEEECEECCCT-TSCTTCCEECSCHHHHHHTTCSEEEEEECT-TSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC---
T ss_pred CCEEEEECCCCCC-CCCCCCCCCCCCHHHHHHHCCCEEEEEECC-CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC-C
T ss_conf 7469992478656-776432332233999986076578887326-788489999999999999736596189983367-6
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHH-HHHHHHHCCCCCEEEEE-CCHHHHHHHHHH-----CCCEEEEEC-
Q ss_conf 7888878999999998610478689997088379-99998418888699992-998999876665-----393799936-
Q gi|254780442|r 351 PNETGADVISSAARQIAETLRLSAIFCYTASGAT-GLRAARERPKLEIIALS-PMIQTARRLALV-----WGIHCVVTE- 422 (480)
Q Consensus 351 ~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~t-A~~iS~~RP~~pIiaiT-~~~~t~r~l~L~-----~GV~p~~~~- 422 (480)
......+.++++ +.+|.+++|+.|.+. .++.. .+.++.. .+|++..- +.......+... -|.--+.+-
T Consensus 183 ~~~~d~~~ia~a-aR~a~ElGADiVK~~-y~~~~~~~v~~a~--~vPvv~~GG~~~~d~~~l~~~~~Ai~aGa~GvviGR 258 (295)
T 3glc_A 183 DMVRDQRYFSLA-TRIAAEMGAQIIKTY-YVEKGFERIVAGC--PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGR 258 (295)
T ss_dssp --CCSHHHHHHH-HHHHHHTTCSEEEEE-CCTTTHHHHHHTC--SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESH
T ss_pred CCCCCHHHHHHH-HHHHHHHCCCEEECC-CCCCCHHHHHHCC--CCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 565347999999-999999589954604-8852377752158--864687689875578999999999987990999685
Q ss_pred ---CCCCHHHHHHHH
Q ss_conf ---879999999999
Q gi|254780442|r 423 ---DASDSDDMVNRA 434 (480)
Q Consensus 423 ---~~~~~~~~i~~a 434 (480)
-.++...+++..
T Consensus 259 nI~Q~~dP~~~~~ai 273 (295)
T 3glc_A 259 NIFQSDHPVAMMKAV 273 (295)
T ss_dssp HHHTSSSHHHHHHHH
T ss_pred CCCCCCCHHHHHHHH
T ss_conf 300588999999999
No 33
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 2x0s_A
Probab=93.76 E-value=0.21 Score=28.46 Aligned_cols=31 Identities=16% Similarity=0.287 Sum_probs=14.3
Q ss_pred CCEEEEEECCHHHHHHHHHHHHHHHEEEEECCC
Q ss_conf 433555327856631178887533124752222
Q gi|254780442|r 213 KIGLMSKIEKPRAIEYASEIIQLSDAVMVARGD 245 (480)
Q Consensus 213 ~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGD 245 (480)
+++|.+-|++++-++.+. -..+|||=+.|-+
T Consensus 559 ~i~l~~Ni~~~~~~~~~~--~~gadGiGL~RtE 589 (913)
T 1h6z_A 559 RLGVRTNADTPADAAKAR--SFGAEGVGLCRTE 589 (913)
T ss_dssp CSEEEEECSSHHHHHHHH--TTTCCSEEECBCS
T ss_pred CEEEEECCCCHHHHHHHH--HCCCCCCCCCCHH
T ss_conf 126675689999999999--6798720012368
No 34
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/proteomics initiative; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=93.32 E-value=0.44 Score=26.03 Aligned_cols=124 Identities=19% Similarity=0.262 Sum_probs=75.8
Q ss_pred CCHHHHHHHHHHHHCCCCCEECCC--CCCCCHHHHHHHHHHHCCCCEEEE-EECCHHHHHHHHHHHHHHHEEEEECCCCC
Q ss_conf 765567789988734885325058--557734799999862003433555-32785663117888753312475222200
Q gi|254780442|r 171 LTQKDREDLHAALQTCEVDWVALS--FIQSADDLLEIRKIISQNKIGLMS-KIEKPRAIEYASEIIQLSDAVMVARGDLG 247 (480)
Q Consensus 171 ltekD~~di~~a~~~~~vD~ialS--fVr~~~di~~~r~~l~~~~~~Iia-KIE~~~al~nl~eI~~~sDgimiaRGDLg 247 (480)
++..|.+-..--++ .++|++.++ ...+..-+..+|.+....+..+|+ -+-|.++.+++ ..+|++-|.=|-=+
T Consensus 225 vg~~~~eR~~~Lv~-aGvD~ivid~ahg~~~~~~~~~k~~~~~~~~~viaGnv~t~~~a~~l----~gad~vkVGiG~Gs 299 (486)
T 2cu0_A 225 VSPFDIKRAIELDK-AGVDVIVVDTAHAHNLKAIKSMKEMRQKVDADFIVGNIANPKAVDDL----TFADAVKVGIGPGS 299 (486)
T ss_dssp ECTTCHHHHHHHHH-TTCSEEEEECSCCCCHHHHHHHHHHHHTCCSEEEEEEECCHHHHTTC----TTSSEEEECSSCST
T ss_pred ECCCHHHHHHHHHH-CCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH----HCCCEEEECCCCCC
T ss_conf 17864899999986-27966996032345411344544321033330677322679899875----35760366344886
Q ss_pred HHCCH----HHHHHHHH--HHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 21587----67368999--999998513983998057678888288984034778999985199689981
Q gi|254780442|r 248 VEMAL----ELIPGIQK--KLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 248 ~e~~~----e~vp~~Qk--~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
+.+-- --+|+++- ..-..+..++.|+|--.-+-.| .||+-|+--|||++||.
T Consensus 300 iCtTr~v~g~g~pq~ta~~~~~~~~~~~~v~iIaDGGi~~s------------GDi~KAla~GAd~VMlG 357 (486)
T 2cu0_A 300 ICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYS------------GDIVKAIAAGADAVMLG 357 (486)
T ss_dssp TBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSH------------HHHHHHHHTTCSEEEES
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCC------------CHHHHHHHHCCCHHHHC
T ss_conf 51464545556828999999999764459869814884753------------68999987077343324
No 35
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleotide and nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=93.03 E-value=0.49 Score=25.73 Aligned_cols=123 Identities=17% Similarity=0.183 Sum_probs=73.0
Q ss_pred CCHHHHHHHHHHHH-CCCCCEECCC--CCCCCHHHHHHHHHHHCC-CCEEE-EEECCHHHHHHHHHHHHHHHEEEEECCC
Q ss_conf 76556778998873-4885325058--557734799999862003-43355-5327856631178887533124752222
Q gi|254780442|r 171 LTQKDREDLHAALQ-TCEVDWVALS--FIQSADDLLEIRKIISQN-KIGLM-SKIEKPRAIEYASEIIQLSDAVMVARGD 245 (480)
Q Consensus 171 ltekD~~di~~a~~-~~~vD~ialS--fVr~~~di~~~r~~l~~~-~~~Ii-aKIE~~~al~nl~eI~~~sDgimiaRGD 245 (480)
+++.|++-++--.+ ..++|||.+. .-.+..-+..++.+-... +..|+ --+.|.++.++|- -..+|+|.|.=|-
T Consensus 103 ~~~d~~~r~~~l~~~~~~~d~I~iDvAhG~~~~~~~~ik~ir~~~~~~~viaGNVaT~e~a~~L~--~aGAD~VkVGIG~ 180 (336)
T 1ypf_A 103 VKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELE--NAGADATKVGIGP 180 (336)
T ss_dssp CSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHH--HHTCSEEEECSSC
T ss_pred ECHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH--HHCCCEEEECCCC
T ss_conf 17878899999986689850899860355303377899999987799727854616789999999--8398589962348
Q ss_pred ---------CCHHCCHHHHHHHHH-HHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECC
Q ss_conf ---------002158767368999-9999985139839980576788882889840347789999851996899814
Q gi|254780442|r 246 ---------LGVEMALELIPGIQK-KLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSA 312 (480)
Q Consensus 246 ---------Lg~e~~~e~vp~~Qk-~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ 312 (480)
.|+-.|. .|- .....+...+.|+|--.-+= ...||+-|+--|||+|||.+
T Consensus 181 GS~CTTr~~tGvg~p~-----~~~~~~~~~~~~~~~~iIaDGGi~------------~~Gdi~KAla~GAd~VMlG~ 240 (336)
T 1ypf_A 181 GKVCITKIKTGFGTGG-----WQLAALRWCAKAASKPIIADGGIR------------TNGDVAKSIRFGATMVMIGS 240 (336)
T ss_dssp STTCHHHHHHSCSSTT-----CHHHHHHHHHHTCSSCEEEESCCC------------STHHHHHHHHTTCSEEEESG
T ss_pred CCCCCCCCCEEECCCC-----HHHHHHHHHHHHCCCCEEECCCCC------------CCHHHHHHHHHCCCHHHHHH
T ss_conf 8776674202005663-----256778887653279657447757------------62289999970765000001
No 36
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=93.01 E-value=0.49 Score=25.70 Aligned_cols=193 Identities=16% Similarity=0.139 Sum_probs=101.1
Q ss_pred HHHHHHHHHHH-----HHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCC-HHHHHHH
Q ss_conf 66311788875-----33124752222002158767368999999998513983998057678888288984-0347789
Q gi|254780442|r 224 RAIEYASEIIQ-----LSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPT-RAEVSDV 297 (480)
Q Consensus 224 ~al~nl~eI~~-----~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PT-RaEv~Dv 297 (480)
.++++++++++ .+||++..+|=+-...+ . -....|+++...--. ...|.+. +.-+.+|
T Consensus 42 ~gl~d~~~~v~~~~~~~~davl~~~G~~~~~~~---~-----------~~~~~~~i~~~~~~~--~~~~~~~~~~~~~sv 105 (273)
T 2qjg_A 42 KGLIDIRKTVNDVAEGGANAVLLHKGIVRHGHR---G-----------YGKDVGLIIHLSGGT--AISPNPLKKVIVTTV 105 (273)
T ss_dssp TTSSSHHHHHHHHHHHTCSEEEECHHHHHSCCC---S-----------SSCCCEEEEECEECC--TTSSSTTCCEECSCH
T ss_pred CCCCCHHHHHHHHHHCCCCEEEECHHHHHHHCC---C-----------CCCCCCEEEEECCCC--CCCCCCCCCEEECHH
T ss_conf 552599999999984599899937577766130---2-----------168875699946876--568886542220019
Q ss_pred HHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH--HCCCCCCCHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 9998519968998144435446589999999988763010124444443--20387888878999999998610478689
Q gi|254780442|r 298 ATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASSAERDSSWLEMRSL--RRIEPNETGADVISSAARQIAETLRLSAI 375 (480)
Q Consensus 298 anav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~--~~~~~~~~~~~aIa~aav~lA~~l~a~aI 375 (480)
--|+.-|+||+.+.--- -..++.+.++.+.+++++++++-.-.....+ ..........+.++.++ .+|.+++|+.+
T Consensus 106 e~A~rlGAdaV~~~v~~-g~~~e~~~l~~~a~i~~e~~~~glp~i~~~yp~g~~~~~~~d~~~i~~aa-R~a~ELGADii 183 (273)
T 2qjg_A 106 EEAIRMGADAVSIHVNV-GSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAA-RLGAELGADIV 183 (273)
T ss_dssp HHHHHTTCSEEEEEEEE-TSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHH-HHHHHTTCSEE
T ss_pred HHHHCCCCCEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHH-HHHHHHCCCEE
T ss_conf 99727685469999854-89607999999999999999739936998623677766777889999999-99998599888
Q ss_pred EEE-CCC-HHHHHHHHHHCCCCCEEEEE-CC----HHHHHHH--HHHCCCEEEEEC---C-CCCHHHHHHHHHH
Q ss_conf 997-088-37999998418888699992-99----8999876--665393799936---8-7999999999999
Q gi|254780442|r 376 FCY-TAS-GATGLRAARERPKLEIIALS-PM----IQTARRL--ALVWGIHCVVTE---D-ASDSDDMVNRACR 436 (480)
Q Consensus 376 iv~-T~s-G~tA~~iS~~RP~~pIiaiT-~~----~~t~r~l--~L~~GV~p~~~~---~-~~~~~~~i~~a~~ 436 (480)
=+. +.+ -...+.++.. .+|++... +. ..+++++ .+--|..-+.+- + ..+...+++....
T Consensus 184 K~~~p~~~e~~~~vv~~~--~~Pvvv~gG~~~~~~~~~l~~v~~A~~~Ga~G~~~GRnvwq~~dp~~~~~al~~ 255 (273)
T 2qjg_A 184 KTSYTGDIDSFRDVVKGC--PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGITRAVCK 255 (273)
T ss_dssp EECCCSSHHHHHHHHHHC--SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHC--CCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHHHHHHHHH
T ss_conf 521799989999999748--987799778888889999999999998799699825122368789999999999
No 37
>1vp8_A Hypothetical protein AF0103; NP_068944.1, structural genomics, JCSG, joint center for structural genomics, PSI; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus dsm 4304} SCOP: c.49.1.2
Probab=93.00 E-value=0.49 Score=25.70 Aligned_cols=105 Identities=15% Similarity=0.220 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECCH------------HHHHHHHHHCCCEEEE
Q ss_conf 8887899999999861047868999708837999998418888699992998------------9998766653937999
Q gi|254780442|r 353 ETGADVISSAARQIAETLRLSAIFCYTASGATGLRAARERPKLEIIALSPMI------------QTARRLALVWGIHCVV 420 (480)
Q Consensus 353 ~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS~~RP~~pIiaiT~~~------------~t~r~l~L~~GV~p~~ 420 (480)
..-++.....|++-|.+++.+.||+.|.||.||.++...--...++++|... .+.++| --.|+.-+.
T Consensus 25 ~~NT~~tl~~a~erA~e~gIk~iVVASssG~TA~k~~e~~kg~~lVvVth~~GF~~pg~~e~~~e~~~~L-~~~G~~V~t 103 (201)
T 1vp8_A 25 RENTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEEL-RKRGAKIVR 103 (201)
T ss_dssp GGGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHH-HHTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHH-HHCCCEEEE
T ss_conf 3138999999999999869977999708866999999974598299995636878999574899999999-977988999
Q ss_pred EC------------CC--CCHHHHHHHHHH---------------HHHHCCCCCCCCEEEEEEEECCC
Q ss_conf 36------------87--999999999999---------------99988887788779998522278
Q gi|254780442|r 421 TE------------DA--SDSDDMVNRACR---------------IVVEQGFGKPGDRIIISAGLPLG 459 (480)
Q Consensus 421 ~~------------~~--~~~~~~i~~a~~---------------~l~~~g~i~~GD~VVvv~G~p~~ 459 (480)
.. .+ -...+.+..+++ .+.+.|++.- +.||.+.|...|
T Consensus 104 ~tH~lsG~eR~is~kfgG~~p~EiiA~tLR~lfgqG~KVavEi~lMAaDaGlIp~-eeVIAiGGT~~G 170 (201)
T 1vp8_A 104 QSHILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGRSRG 170 (201)
T ss_dssp CCCTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECSSSS
T ss_pred ECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCC-CCEEEECCCCCC
T ss_conf 5143343046642214797989999999999847874799998654305799870-008997556677
No 38
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=91.41 E-value=0.74 Score=24.37 Aligned_cols=129 Identities=18% Similarity=0.140 Sum_probs=75.8
Q ss_pred CCCHHHHHHHHHHHH-CCCCCEEC--CCCCCCCHHHHHHHHHHHC-CCCEEEE-EECCHHHHHHHHHHHHHHHEEEEECC
Q ss_conf 676556778998873-48853250--5855773479999986200-3433555-32785663117888753312475222
Q gi|254780442|r 170 ALTQKDREDLHAALQ-TCEVDWVA--LSFIQSADDLLEIRKIISQ-NKIGLMS-KIEKPRAIEYASEIIQLSDAVMVARG 244 (480)
Q Consensus 170 ~ltekD~~di~~a~~-~~~vD~ia--lSfVr~~~di~~~r~~l~~-~~~~Iia-KIE~~~al~nl~eI~~~sDgimiaRG 244 (480)
...++|.+.+...++ ..++|++. .....+..-++.++.+-.. .+..||+ -|-|.++.+.|-+ ..+|+|.|.-|
T Consensus 114 gv~~~d~~~~~~l~~a~~~v~~i~IDvAhGh~~~~~~~i~~vk~~~~~~~VIaGNV~T~e~~~~L~~--aGAD~VkVGiG 191 (351)
T 2c6q_A 114 GTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELIL--SGADIIKVGIG 191 (351)
T ss_dssp CSSHHHHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--TTCSEEEECSS
T ss_pred CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHH--CCCCEEEEEEC
T ss_conf 7888899999999862789719984146666656777899999878987479863312899999986--67864897132
Q ss_pred CCCHHCCHH----HHHHHHH--HHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 200215876----7368999--9999985139839980576788882889840347789999851996899814
Q gi|254780442|r 245 DLGVEMALE----LIPGIQK--KLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSA 312 (480)
Q Consensus 245 DLg~e~~~e----~vp~~Qk--~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ 312 (480)
-=++.+--+ -+|+++- ..-..++.++.|+|--.-+=.| .||+-|+--|||+|||.+
T Consensus 192 ~Gs~CtTr~vtGvGvPq~sai~~~~~~~~~~~v~IIADGGi~~~------------GDi~KAla~GAd~VMlG~ 253 (351)
T 2c6q_A 192 PGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCP------------GDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp CSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSH------------HHHHHHHHTTCSEEEEST
T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCC------------HHHHHHHHCCCCHHHHCH
T ss_conf 77651356357656561335999999875248867825886762------------299999983886401234
No 39
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infectious diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=91.00 E-value=0.5 Score=25.66 Aligned_cols=61 Identities=20% Similarity=0.201 Sum_probs=53.9
Q ss_pred CCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 4335553278566311788875331247522220021587673689999999985139839980
Q gi|254780442|r 213 KIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIA 276 (480)
Q Consensus 213 ~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivA 276 (480)
+.++.+=+|.-.-+-||++-++.+|-|+-.-|-+-.+.-.-|+|. .+.+.|+++++|||+-
T Consensus 265 gA~l~~G~~~v~~~~~l~~~i~~aDlVITGEG~~D~QSl~GK~p~---~Va~~A~~~~vPviai 325 (383)
T 3cwc_A 265 GAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPI---GVANIAKRYNKPVIGI 325 (383)
T ss_dssp CCEEECHHHHHHHHTTHHHHHHHCSEEEECCEESCC----CHHHH---HHHHHHHHTTCCEEEE
T ss_pred CCCCCCHHHHHHHHCCHHHHHCCCCEEEECCCCCCCCCCCCCCHH---HHHHHHHHHCCCEEEE
T ss_conf 795488599999860888772789999989976887677886299---9999999819999999
No 40
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=90.97 E-value=0.46 Score=25.95 Aligned_cols=35 Identities=11% Similarity=0.204 Sum_probs=16.9
Q ss_pred CHHHHHHHHH-CCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 9999999997-3997899988888989999999999999
Q gi|254780442|r 19 SEDVINRLHE-EGTDVFRINMSHTSHDKMCELIKKIRAV 56 (480)
Q Consensus 19 ~~e~i~~l~~-aG~nv~RiN~SHg~~e~~~~~i~~ir~~ 56 (480)
..+.-..|.+ .|+-|.-=|| +.|+..+.+.+++.+
T Consensus 75 e~~MAiamA~~GGlGVIHrn~---sie~Q~~~V~~VK~~ 110 (514)
T 1jcn_A 75 EADMAIAMALMGGIGFIHHNC---TPEFQANEVRKVKNF 110 (514)
T ss_dssp SHHHHHHHHHTTCEEEECCSS---CHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHCCCEEEECCCC---CHHHHHHHHHHHHHH
T ss_conf 899999999779849986999---999999999998500
No 41
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 1ojx_A 1ok4_A 1ok6_A
Probab=89.68 E-value=1 Score=23.33 Aligned_cols=179 Identities=17% Similarity=0.129 Sum_probs=94.8
Q ss_pred HHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 33124752222002158767368999999998513983998057678888288984034778999985199689981444
Q gi|254780442|r 235 LSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAET 314 (480)
Q Consensus 235 ~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ET 314 (480)
..||++...|=+ +.+.....|.++....-.+ ...+.+.+.=+.+|-.|+.-|+|++.+.-
T Consensus 54 g~dav~~~~G~~-----------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ve~a~~lGAdaV~~~v-- 113 (263)
T 1w8s_A 54 GFDGVVFQRGIA-----------------EKYYDGSVPLILKLNGKTT-LYNGEPVSVANCSVEEAVSLGASAVGYTI-- 113 (263)
T ss_dssp TCSEEEECHHHH-----------------HHHCCSSSCEEEECEECCT-TCCSSCCCEESSCHHHHHHTTCSEEEEEE--
T ss_pred CCCEEEECCCHH-----------------HHHCCCCCCEEEEECCCCC-CCCCCCHHHHHCCHHHHHHCCCCEEEEEE--
T ss_conf 888664150488-----------------7631356771799616665-56661110201479999727547689997--
Q ss_pred CCC-CCHHHHHHHHHHHHHHHHCCHHHHHHHHH--HCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE-ECCCHHHHHHHHH
Q ss_conf 354-46589999999988763010124444443--2038788887899999999861047868999-7088379999984
Q gi|254780442|r 315 ASG-SYPVDAVRTMSLVASSAERDSSWLEMRSL--RRIEPNETGADVISSAARQIAETLRLSAIFC-YTASGATGLRAAR 390 (480)
Q Consensus 315 a~G-~yP~~~v~~~~~i~~~~E~~~~~~~~~~~--~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv-~T~sG~tA~~iS~ 390 (480)
..| .+--++++.+.++..+++++-.-.-...+ ......+...+.++++ +.+|.+++|+.|=+ ||.+..+-..+-.
T Consensus 114 ~~g~~~e~~~l~~~a~v~~e~~~~glP~~~e~~p~g~~~~~~~~~e~v~~a-aRia~ELGADiiK~~~~g~~~~~~~~v~ 192 (263)
T 1w8s_A 114 YPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYA-ARIALELGADAMKIKYTGDPKTFSWAVK 192 (263)
T ss_dssp CTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHH-HHHHHHHTCSEEEEECCSSHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHH-HHHHHHHCCCEEEEECCCCHHHHHHHHH
T ss_conf 169964799999999999999980993798766448864466777899999-9999983998465337998798888887
Q ss_pred HCCCCCEEEEE----CCHH-HHHHH--HHHCCCEEEEECC----CCCHHHHHHHH
Q ss_conf 18888699992----9989-99876--6653937999368----79999999999
Q gi|254780442|r 391 ERPKLEIIALS----PMIQ-TARRL--ALVWGIHCVVTED----ASDSDDMVNRA 434 (480)
Q Consensus 391 ~RP~~pIiaiT----~~~~-t~r~l--~L~~GV~p~~~~~----~~~~~~~i~~a 434 (480)
.=.++|++..- .+.. ++++. .+--|..-+.+-. .++...+++..
T Consensus 193 ~a~~~PVli~GG~~~~~~~~~l~~v~~a~~~Ga~G~~~GRnv~q~~~p~~~~~al 247 (263)
T 1w8s_A 193 VAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRDALKFARAL 247 (263)
T ss_dssp HTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTTHHHHHHHH
T ss_pred HCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHHHHHHH
T ss_conf 1467766896389889999999999999987996998453111687899999999
No 42
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensation, amino-acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=89.33 E-value=1.1 Score=23.15 Aligned_cols=156 Identities=13% Similarity=0.161 Sum_probs=92.0
Q ss_pred CCCHHHHHHHHHHHHCCCCCEECCC-CCCCCHHHHHHHHHHHCC-CCEEEEEEC-CHHHHHHHHHHHHHHHEE--EEECC
Q ss_conf 6765567789988734885325058-557734799999862003-433555327-856631178887533124--75222
Q gi|254780442|r 170 ALTQKDREDLHAALQTCEVDWVALS-FIQSADDLLEIRKIISQN-KIGLMSKIE-KPRAIEYASEIIQLSDAV--MVARG 244 (480)
Q Consensus 170 ~ltekD~~di~~a~~~~~vD~ialS-fVr~~~di~~~r~~l~~~-~~~IiaKIE-~~~al~nl~eI~~~sDgi--miaRG 244 (480)
.+|..|+..|.-.+.+.+||+|=+. |+.+..+-+.++.+.... ..++.+-.. +...++.. +-...|.+ .+.-.
T Consensus 57 ~fs~e~K~~i~~~L~~~GV~~IEvG~p~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~d~~~a--~~~g~~~v~i~~~~s 134 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICKLGLKCKILTHIRCHMDDARVA--VETGVDGVDVVIGTS 134 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHH--HHTTCSEEEEEEEC-
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH--HHCCCCEEEEEECCH
T ss_conf 989999999999999819798999668478367999999987046035355464380769999--986989689985452
Q ss_pred CCCHH----CCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHH-CCCCEEEECCCCCCCCC
Q ss_conf 20021----58767368999999998513983998057678888288984034778999985-19968998144435446
Q gi|254780442|r 245 DLGVE----MALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVF-EEADAIMLSAETASGSY 319 (480)
Q Consensus 245 DLg~e----~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~-dG~D~imLs~ETa~G~y 319 (480)
|.-.+ ...+++...-+.+++.|+..|..|.+..+ ...+....++.+++.++. .|+|.|.|.. |.=+..
T Consensus 135 ~~~~~~~~~~~~~~~l~~~~~~v~~ak~~G~~V~~~~e------d~~~~~~~~l~~~~~~~~~~Gad~i~laD-T~G~~~ 207 (423)
T 3ivs_A 135 QYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE------DSFRSDLVDLLSLYKAVDKIGVNRVGIAD-TVGCAT 207 (423)
T ss_dssp ------------CHHHHHHHHHHHHHHTTTCEEEEEEE------SGGGSCHHHHHHHHHHHHHHCCSEEEEEE-TTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC------CCCCCCHHHHHHHHHHHHHCCCCCCCCCC-CCCCCC
T ss_conf 99999986212999999999999887505861112014------45577689999999887613987135456-546627
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 589999999988763
Q gi|254780442|r 320 PVDAVRTMSLVASSA 334 (480)
Q Consensus 320 P~~~v~~~~~i~~~~ 334 (480)
|.++-+.++.+....
T Consensus 208 P~~v~~~i~~l~~~~ 222 (423)
T 3ivs_A 208 PRQVYDLIRTLRGVV 222 (423)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred CHHHHEEEEECCCCC
T ss_conf 300000133114665
No 43
>3kts_A Glycerol uptake operon antiterminator regulatory protein; structural genomics, PSI-2, protein structure initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=88.71 E-value=0.86 Score=23.91 Aligned_cols=70 Identities=10% Similarity=0.237 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHH----HHHHH--HHHEEEEECCC
Q ss_conf 56778998873488532505855773479999986200343355532785663117----88875--33124752222
Q gi|254780442|r 174 KDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYA----SEIIQ--LSDAVMVARGD 245 (480)
Q Consensus 174 kD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl----~eI~~--~sDgimiaRGD 245 (480)
+|.++++.+++. +..++.+.+. +-..+.++-+.+.+++-.+|--++--+|+.+= +=|.+ ..|||+=-|..
T Consensus 17 r~~~~le~al~s-~~~~iflL~g-~I~~l~~iv~~~k~~gK~vfVHiDLI~GL~~d~~av~fL~~~~~~dGIISTk~~ 92 (192)
T 3kts_A 17 HNQKDMEKILEL-DLTYMVMLET-HVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGN 92 (192)
T ss_dssp SSSHHHHHHTTS-SCCEEEECSE-ETTTHHHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCHH
T ss_pred CCHHHHHHHHCC-CCCEEEEECC-CHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCHH
T ss_conf 788999999758-9989999537-187799999999987998999853167778888999999984289989978899
No 44
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=87.66 E-value=1 Score=23.44 Aligned_cols=117 Identities=18% Similarity=0.149 Sum_probs=70.7
Q ss_pred HHHHHHHHCCCCCEECCC--CCCCCHHHHHH---HHHHHCCCCEEEE-EECCHHHHHHHHHHHHHHHEEEEECCCCCHHC
Q ss_conf 789988734885325058--55773479999---9862003433555-32785663117888753312475222200215
Q gi|254780442|r 177 EDLHAALQTCEVDWVALS--FIQSADDLLEI---RKIISQNKIGLMS-KIEKPRAIEYASEIIQLSDAVMVARGDLGVEM 250 (480)
Q Consensus 177 ~di~~a~~~~~vD~ialS--fVr~~~di~~~---r~~l~~~~~~Iia-KIE~~~al~nl~eI~~~sDgimiaRGDLg~e~ 250 (480)
+-.+..++. ++|++.+- ...+..-+..+ |+... .++.|++ -+.|.++.++|-+ ..+|+|-|.-|-=++.+
T Consensus 245 eRa~aLveA-GvD~lvID~AhG~s~~~~~~i~~ik~~~~-~~~~viaGNv~T~~~a~~L~~--~gad~ikVGiG~GsiCt 320 (503)
T 1me8_A 245 ERVPALVEA-GADVLCIDSSDGFSEWQKITIGWIREKYG-DKVKVGAGNIVDGEGFRYLAD--AGADFIKIGIGGGSICI 320 (503)
T ss_dssp HHHHHHHHH-TCSEEEECCSCCCSHHHHHHHHHHHHHHG-GGSCEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTCC
T ss_pred HHHHHHHHC-CCCEEEEECHHHHHHHHHHHHHHHHHHCC-CCEEEECCCCCCHHHHHHHHH--HCCCEEEEECCCCCCCC
T ss_conf 999999974-99879961023456889999999997578-860473585458899999998--18786886113786663
Q ss_pred CHH----HHHHHHHHHHHHH----HHC------CCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 876----7368999999998----513------983998057678888288984034778999985199689981
Q gi|254780442|r 251 ALE----LIPGIQKKLIRIA----RQL------GKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 251 ~~e----~vp~~Qk~ii~~~----~~~------~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
--+ -+| |-.-+..| +++ +.|||--.-+-.| .||+-|+--|||+|||.
T Consensus 321 Tr~~~gvg~p--q~tav~~~~~~~~~~~~~~~~~vpiIADGGi~~~------------Gdi~KAla~GAd~VMlG 381 (503)
T 1me8_A 321 TREQKGIGRG--QATAVIDVVAERNKYFEETGIYIPVCSDGGIVYD------------YHMTLALAMGADFIMLG 381 (503)
T ss_dssp STTTTCCCCC--HHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSH------------HHHHHHHHTTCSEEEES
T ss_pred CHHHCCCCCC--HHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC------------CHHHHHHHHCCCEEEEC
T ss_conf 4100445773--8889999999998753321788854505774875------------67999998489889766
No 45
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreductase; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=87.03 E-value=1.5 Score=22.14 Aligned_cols=114 Identities=19% Similarity=0.196 Sum_probs=71.8
Q ss_pred HHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHH
Q ss_conf 89988734885325058557734799999862003433555327856631178887533124752222002158767368
Q gi|254780442|r 178 DLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPG 257 (480)
Q Consensus 178 di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~ 257 (480)
.+...++. +++++..+|--..+.+..+++ ..+++++.+-+.+.-+...+ ..+|++++.-.+-|=+.+...+..
T Consensus 88 ~~~~~~~~-~v~~v~~~~g~~~~~i~~~~~----~g~~v~~~v~s~~~A~~a~~--~G~D~li~qG~eaGGh~g~~~~~~ 160 (328)
T 2gjl_A 88 YRAAIIEA-GIRVVETAGNDPGEHIAEFRR----HGVKVIHKCTAVRHALKAER--LGVDAVSIDGFECAGHPGEDDIPG 160 (328)
T ss_dssp HHHHHHHT-TCCEEEEEESCCHHHHHHHHH----TTCEEEEEESSHHHHHHHHH--TTCSEEEEECTTCSBCCCSSCCCH
T ss_pred HHHHHHHH-CCCEEECCCCCCHHHHHHHHH----CCCEEEEECCCHHHHHHHHH--HCCCCCEECCCCCCCCCCCCCCCH
T ss_conf 99999972-797887168996999999987----69889996077999999998--299921202776666778775416
Q ss_pred HHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 999999998513983998057678888288984034778999985199689981
Q gi|254780442|r 258 IQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 258 ~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
.. .+-........|||.|.-+.++ .|++.++.-|+|++|+.
T Consensus 161 ~~-L~~~v~~~~~iPviaAGGI~~g------------~~iaaal~lGA~gV~~G 201 (328)
T 2gjl_A 161 LV-LLPAAANRLRVPIIASGGFADG------------RGLVAALALGADAINMG 201 (328)
T ss_dssp HH-HHHHHHTTCCSCEEEESSCCSH------------HHHHHHHHHTCSEEEES
T ss_pred HH-HHHHHHHHCCCCEEECCCCCCH------------HHHHHHHHCCCCHHEEC
T ss_conf 67-5899987337867713665666------------99999984395120564
No 46
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=85.08 E-value=1.8 Score=21.46 Aligned_cols=77 Identities=8% Similarity=0.032 Sum_probs=50.8
Q ss_pred HHHHHCCCCCEEEEECCCHHH-HHHHHHHCCCCCEEEEECCHHHH-HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 998610478689997088379-99998418888699992998999-876665393799936879999999999999998
Q gi|254780442|r 364 RQIAETLRLSAIFCYTASGAT-GLRAARERPKLEIIALSPMIQTA-RRLALVWGIHCVVTEDASDSDDMVNRACRIVVE 440 (480)
Q Consensus 364 v~lA~~l~a~aIiv~T~sG~t-A~~iS~~RP~~pIiaiT~~~~t~-r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~~ 440 (480)
.+....-..++|+....+|.. .+.+-...+..||+.+|.+.... +.-.+--|+.-++.+++.+.++.+......++.
T Consensus 55 l~~l~~~~~DlviLp~~~G~ell~~ir~~~~~~piiilT~~~~~~~~~~al~~Gaddyl~KPf~~~~eL~aRI~allRR 133 (137)
T 2pln_A 55 EYLMDIRNYDLVMVSDKNALSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRF 133 (137)
T ss_dssp HHHHHHSCCSEEEECSTTHHHHHHHHHHHSTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSCHHHHHHHHHHHTC-
T ss_pred HHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 9999728999999827876379999996288997599964899999999998699889979999989999999999666
No 47
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2- epimerase; mannac-6-P epimerase, NANE, structural genomics, protein structure initiative; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=84.86 E-value=1.9 Score=21.40 Aligned_cols=51 Identities=6% Similarity=0.102 Sum_probs=34.0
Q ss_pred HHHHHH-HCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH
Q ss_conf 999985-139839980576788882889840347789999851996899814443544658999999
Q gi|254780442|r 262 LIRIAR-QLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTM 327 (480)
Q Consensus 262 ii~~~~-~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~ 327 (480)
.+..++ ....|+|++.-+-.. .|++.++.-|+|++++. ||+-+ |.+..+..
T Consensus 166 ~v~~~~~~~~iPvia~GGI~t~------------ed~~~al~~GAdgV~vG--sAi~~-p~~~~~~f 217 (223)
T 1y0e_A 166 FLKDVLQSVDAKVIAEGNVITP------------DMYKRVMDLGVHCSVVG--GAITR-PKEITKRF 217 (223)
T ss_dssp HHHHHHHHCCSEEEEESSCCSH------------HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHH
T ss_pred HHHHHHHCCCCCEEEECCCCCH------------HHHHHHHHCCCCEEEEC--HHHCC-HHHHHHHH
T ss_conf 9999984289978986898999------------99999998699999984--21179-89999999
No 48
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=81.80 E-value=2.5 Score=20.55 Aligned_cols=109 Identities=14% Similarity=0.198 Sum_probs=70.2
Q ss_pred HHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEE----CCCCCHHCCH
Q ss_conf 789988734885325058557734799999862003433555327856631178887533124752----2220021587
Q gi|254780442|r 177 EDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVA----RGDLGVEMAL 252 (480)
Q Consensus 177 ~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimia----RGDLg~e~~~ 252 (480)
+.++.++++ +++++..+|---.+-++.+++ ..+.++..+.+.+..+...+ ...|++++. -|..|-.-.+
T Consensus 79 ~~~~~~~~~-~v~~v~~~~g~p~~~~~~~~~----~g~~v~~~v~~~~~A~~a~~--~g~D~lv~qG~eaGGH~g~~~~~ 151 (332)
T 2z6i_A 79 DIVDLVIEE-GVKVVTTGAGNPSKYMERFHE----AGIIVIPVVPSVALAKRMEK--IGADAVIAEGMEAGGHIGKLTTM 151 (332)
T ss_dssp HHHHHHHHT-TCSEEEECSSCGGGTHHHHHH----TTCEEEEEESSHHHHHHHHH--TTCSCEEEECTTSSEECCSSCHH
T ss_pred HHHHHHHHC-CCCEEEECCCCCHHHHHHHHH----HCCEEEECCCCHHHHHHHHH--HCCCEEEEECCCCCCCCCCCCCH
T ss_conf 999999866-998899828897999999997----09889855878899999998--68998998678767887556511
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 67368999999998513983998057678888288984034778999985199689981
Q gi|254780442|r 253 ELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 253 e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
.-+|. +. .....|||.|.=+-+. .|++.|..-|+|++++.
T Consensus 152 ~L~~~----v~---~~~~vPviaAGGI~dg------------~~~aaal~lGA~gV~~G 191 (332)
T 2z6i_A 152 TLVRQ----VA---TAISIPVIAAGGIADG------------EGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp HHHHH----HH---HHCSSCEEEESSCCSH------------HHHHHHHHTTCSEEEEC
T ss_pred HHHHH----HH---HHCCCCEEEECCCCCH------------HHHHHHHHCCCCEEEEC
T ss_conf 25567----77---5068435752335428------------89999997597632237
No 49
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transferase; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=81.63 E-value=2.5 Score=20.51 Aligned_cols=99 Identities=16% Similarity=0.318 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEH
Q ss_conf 73479999986200343355532785663117888753312475222200215876736899999999851398399805
Q gi|254780442|r 198 SADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIAT 277 (480)
Q Consensus 198 ~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivAT 277 (480)
+.++..++.+++.+.++..++=+=..++++-++++ ..|.+=||.+|+ ...| +|+.+.+.+||+|+.|
T Consensus 89 ~~~~~~~l~~~~k~~gi~f~~t~fd~~sv~~l~~~--~~~~~KIaS~~~------~n~~-----Li~~i~~~~kpiiiSt 155 (349)
T 2wqp_A 89 NEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRM--DIPAYKIGSGEC------NNYP-----LIKLVASFGKPIILST 155 (349)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH--TCSCEEECGGGT------TCHH-----HHHHHHTTCSCEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH--CCCCEECCCHHH------CCHH-----HHHHHHHCCCCEEEEC
T ss_conf 26899999999862575288503642367887751--555212152121------4089-----9999997399756743
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHH-CCCCEEEECCCCCCCCCHH
Q ss_conf 7678888288984034778999985-1996899814443544658
Q gi|254780442|r 278 QMLESMVTSPFPTRAEVSDVATAVF-EEADAIMLSAETASGSYPV 321 (480)
Q Consensus 278 q~leSM~~~p~PTRaEv~Dvanav~-dG~D~imLs~ETa~G~yP~ 321 (480)
-|. |-.|+.+..+... .+.+-++|-. +-.||.
T Consensus 156 G~~---------~~~eI~~~v~~~~~~~~~~~llhC---~s~YPt 188 (349)
T 2wqp_A 156 GMN---------SIESIKKSVEIIREAGVPYALLHC---TNIYPT 188 (349)
T ss_dssp TTC---------CHHHHHHHHHHHHHHTCCEEEEEC---CCCSSC
T ss_pred CCC---------HHHHHHHHHHHHHHHCCCCEEEEE---ECCCCC
T ss_conf 543---------055566789888763246313253---489995
No 50
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=81.35 E-value=2.5 Score=20.44 Aligned_cols=93 Identities=17% Similarity=0.314 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHH
Q ss_conf 47999998620034335553278566311788875331247522220021587673689999999985139839980576
Q gi|254780442|r 200 DDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQM 279 (480)
Q Consensus 200 ~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~ 279 (480)
+.++.+.+...+.++.+++-+...+-++- +.+..|.+-|+=+|+ .|-.+|+.+-+.|||||+.|-|
T Consensus 89 ~~l~~l~~~~~~~~~~i~Tdvhe~~~~~~---~~~~vdi~kI~S~~~-----------~n~~LL~~ia~t~KpvilstG~ 154 (276)
T 1vs1_A 89 EGLKLLRRAGDEAGLPVVTEVLDPRHVET---VSRYADMLQIGARNM-----------QNFPLLREVGRSGKPVLLKRGF 154 (276)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCGGGHHH---HHHHCSEEEECGGGT-----------TCHHHHHHHHHHTCCEEEECCT
T ss_pred HHHHHHHHHHHHHCCCEEEECCCHHHHHH---CCCEEEEEEECCCHH-----------HHHHHHHHHHHCCCEEEECCCC
T ss_conf 88999985578759833575176366553---151100898535100-----------1899999999739719966777
Q ss_pred HHHHHHCCCCCHHHHHHHHHHH-HCCCCEEEECCCC
Q ss_conf 7888828898403477899998-5199689981444
Q gi|254780442|r 280 LESMVTSPFPTRAEVSDVATAV-FEEADAIMLSAET 314 (480)
Q Consensus 280 leSM~~~p~PTRaEv~Dvanav-~dG~D~imLs~ET 314 (480)
..+. .|+.-+...+ .-|-+.++|..-+
T Consensus 155 ~~~~--------~~~~~~~~~~~~~~~~~i~l~~~~ 182 (276)
T 1vs1_A 155 GNTV--------EELLAAAEYILLEGNWQVVLVERG 182 (276)
T ss_dssp TCCH--------HHHHHHHHHHHHTTCCCEEEEECC
T ss_pred CCCH--------HHHHHHHHHHHHCCCEEEEEEECC
T ss_conf 6748--------899999999985597167775313
No 51
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=81.16 E-value=1.9 Score=21.31 Aligned_cols=53 Identities=21% Similarity=0.443 Sum_probs=34.0
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHH---HCCCCEE--EEECCCC-CHHHHHHHHHHHHHH
Q ss_conf 775269994187757999999999---7399789--9988888-989999999999999
Q gi|254780442|r 4 LRRIKIISTLGPSSFSEDVINRLH---EEGTDVF--RINMSHT-SHDKMCELIKKIRAV 56 (480)
Q Consensus 4 mrktKIi~TlGPas~~~e~i~~l~---~aG~nv~--RiN~SHg-~~e~~~~~i~~ir~~ 56 (480)
|.++|||||+-|...-++.+.+.+ ..|+|++ |+++-+. +.+...+.+..+|+.
T Consensus 1 ~~~~~~v~~~~p~~~~~~~~~~~i~~~~~~~D~vElRlD~l~~~~~~~i~~~~~~l~~~ 59 (238)
T 1sfl_A 1 MTHVEVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVM 59 (238)
T ss_dssp --CCEEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC--
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 97305999758633489999999986056898899983246688968999999999861
No 52
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=81.05 E-value=2.6 Score=20.37 Aligned_cols=96 Identities=11% Similarity=0.010 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHCCCCEEEEE-E---CCHHHHHHHHHHHHHHHEEEEECCCCC----H---------HCCH-HHHHHHHHH
Q ss_conf 47999998620034335553-2---785663117888753312475222200----2---------1587-673689999
Q gi|254780442|r 200 DDLLEIRKIISQNKIGLMSK-I---EKPRAIEYASEIIQLSDAVMVARGDLG----V---------EMAL-ELIPGIQKK 261 (480)
Q Consensus 200 ~di~~~r~~l~~~~~~IiaK-I---E~~~al~nl~eI~~~sDgimiaRGDLg----~---------e~~~-e~vp~~Qk~ 261 (480)
++++++|+.. +.+++.| + .+++..+.+-+ ..+|+|.|+=..-+ . ..|. .-+|.++..
T Consensus 168 ~~i~~l~~~~---~~~vivk~v~~~~~~~~a~~~~~--~Gad~i~v~n~gG~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 242 (349)
T 1p0k_A 168 KRIEQICSRV---SVPVIVKEVGFGMSKASAGKLYE--AGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASL 242 (349)
T ss_dssp HHHHHHHHHC---SSCEEEEEESSCCCHHHHHHHHH--HTCSEEEEEC---------------CCGGGGTTCSCCHHHHH
T ss_pred HHHHHHHHHC---CCCCEEEEECCCCCHHHHHHHHH--CCCCEEEECCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHH
T ss_conf 9999999876---99857888167654999999997--599999977899888765531110156665257679999999
Q ss_pred HHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 999985139839980576788882889840347789999851996899814
Q gi|254780442|r 262 LIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSA 312 (480)
Q Consensus 262 ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ 312 (480)
.-...-..+.|||...-+-.+ .||+-|+.-|||+||+..
T Consensus 243 ~~~~~~~~~v~viadGGIr~g------------~Dv~KAlalGAdaV~iGr 281 (349)
T 1p0k_A 243 AEIRSEFPASTMIASGGLQDA------------LDVAKAIALGASCTGMAG 281 (349)
T ss_dssp HHHHHHCTTSEEEEESSCCSH------------HHHHHHHHTTCSEEEECH
T ss_pred HHHHHHCCCCEEEECCCCCCH------------HHHHHHHHCCCCEEEECH
T ss_conf 999873579817973897768------------999999984999887839
No 53
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=80.05 E-value=2.7 Score=20.19 Aligned_cols=160 Identities=13% Similarity=0.109 Sum_probs=82.7
Q ss_pred HCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH-CCCCCCCHHHHHHHHH
Q ss_conf 288984034778999985199689981444354465899999999887630101244444432-0387888878999999
Q gi|254780442|r 285 TSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASSAERDSSWLEMRSLR-RIEPNETGADVISSAA 363 (480)
Q Consensus 285 ~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~-~~~~~~~~~~aIa~aa 363 (480)
....|-.+--.++-++|.+. +-++++|||-.||-- +.-+++-.=....+ .....+ -...+. ...++ ..|
T Consensus 57 R~~LPi~~~~~~il~~i~~n-~vvvV~G~TGsGKST-qiPq~Lle~~~~~~------~~~~~~I~~tqPR-R~aa~-s~A 126 (235)
T 3llm_A 57 RELLPVKKFESEILEAISQN-SVVIIRGATGCGKTT-QVPQFILDDFIQND------RAAECNIVVTQPR-RISAV-SVA 126 (235)
T ss_dssp HHTSGGGGGHHHHHHHHHHC-SEEEEECCTTSSHHH-HHHHHHHHHHHHTT------CGGGCEEEEEESS-HHHHH-HHH
T ss_pred HHHCCCHHHHHHHHHHHHHC-CEEEEEECCCCCHHH-HHHHHHHHHHHHCC------CCCCCEEEEECCC-HHHHH-HHH
T ss_conf 98499168899999999979-979999389899999-99999998676427------8888659996373-79999-999
Q ss_pred HHHHHCCCCCEEEEECCCHHHHHHHHHH-CCCCCEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCC
Q ss_conf 9986104786899970883799999841-888869999299899987666539379993687999999999999999888
Q gi|254780442|r 364 RQIAETLRLSAIFCYTASGATGLRAARE-RPKLEIIALSPMIQTARRLALVWGIHCVVTEDASDSDDMVNRACRIVVEQG 442 (480)
Q Consensus 364 v~lA~~l~a~aIiv~T~sG~tA~~iS~~-RP~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~~~g 442 (480)
-.+|.+.+... -..-|++.+.-+.. ++...|...|.-.-..+....+.++.-+.+++.+..+...+..+.++++.-
T Consensus 127 ~rva~e~~~~~---G~~vGy~ir~e~~~~~~~t~i~y~T~g~lLr~~~~~L~~~s~IIiDEvHERs~~tD~lL~llk~~~ 203 (235)
T 3llm_A 127 ERVAFERGEEP---GKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVV 203 (235)
T ss_dssp HHHHHTTTCCT---TSSEEEEETTEEECCCSSSEEEEEEHHHHHHHHHHCCTTCCEEEECCTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCC---CCEECEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEECCHHHHCCHHHHHHHHHHHHHH
T ss_conf 99999828999---986051786674468887147860302000011034555312000057644613899999999999
Q ss_pred CCCCCCEEEEEEEEC
Q ss_conf 877887799985222
Q gi|254780442|r 443 FGKPGDRIIISAGLP 457 (480)
Q Consensus 443 ~i~~GD~VVvv~G~p 457 (480)
...++=++|+.+...
T Consensus 204 ~~~~~lklIlmSATl 218 (235)
T 3llm_A 204 QAYPEVRIVLMSATI 218 (235)
T ss_dssp HHCTTSEEEEEECSS
T ss_pred HHCCCCEEEEECCCC
T ss_conf 778996799976878
No 54
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=79.07 E-value=3 Score=19.93 Aligned_cols=185 Identities=12% Similarity=0.175 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHCC-C--CEEE--EEECCHHHHHHHHHHHHHHHEEEEECC-----------CCCHHCCHHHHHHHHHHHH
Q ss_conf 4799999862003-4--3355--532785663117888753312475222-----------2002158767368999999
Q gi|254780442|r 200 DDLLEIRKIISQN-K--IGLM--SKIEKPRAIEYASEIIQLSDAVMVARG-----------DLGVEMALELIPGIQKKLI 263 (480)
Q Consensus 200 ~di~~~r~~l~~~-~--~~Ii--aKIE~~~al~nl~eI~~~sDgimiaRG-----------DLg~e~~~e~vp~~Qk~ii 263 (480)
+.+..+.+.+... + +-|+ |||+++..+ |+.+++.+|.|++.=| ++|-..--+..-...+.|+
T Consensus 191 kEl~~L~~~l~~p~rP~vaIlGGaKisdKi~v--l~~l~~k~D~iiigG~mantfL~a~G~~iG~sl~e~~~~~~a~~i~ 268 (415)
T 16pk_A 191 KEISYFAKVLGNPPRPLVAIVGGAKVSDKIQL--LDNMLQRIDYLLIGGAMAYTFLKAQGYSIGKSKCEESKLEFARSLL 268 (415)
T ss_dssp HHHHHHHHHHSCCCSSEEEEECSSCSGGGHHH--HHHHGGGCSEEEECTTHHHHHHHHHTCCCTTCCCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEEEEECCCCCCHHHH--HHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999970999984899605663448999--9999974582454518999999981985565423156689999999
Q ss_pred HHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 99851398399805767888828898403477899998519968998144435446589999999988763010124444
Q gi|254780442|r 264 RIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASSAERDSSWLEM 343 (480)
Q Consensus 264 ~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~ 343 (480)
.++.+.+++++.-+...-+=-.+ ......+.++. .+.+ |...|- +| -++++....++..+..- .|.-.
T Consensus 269 ~~~~~~~~~i~lp~d~~v~~~~~-~~~~~~~~~~~-~i~~--~~~i~D----IG---~~Ti~~~~~~i~~a~tI-~wNGP 336 (415)
T 16pk_A 269 KKAEDRKVQVILPIDHVCHTEFK-AVDSPLITEDQ-NIPE--GHMALD----IG---PKTIEKYVQTIGKCKSA-IWNGP 336 (415)
T ss_dssp HHHHHTTCEEECCSSEEEESSSS-CCSSCEECSSS-CCCT--TCEEEE----EC---HHHHHHHHHHHTTCSEE-EEESC
T ss_pred HHHHHCCCEEECCCCEECCCCCC-CCCCCEECCCC-CCCC--CCHHHC----CC---HHHHHHHHHHHHHCCEE-EEECC
T ss_conf 88886492262662301134556-55542002333-5578--724320----34---35557789988547899-99787
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEE
Q ss_conf 4432038788887899999999861047868999708837999998418888699992
Q gi|254780442|r 344 RSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGLRAARERPKLEIIALS 401 (480)
Q Consensus 344 ~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS~~RP~~pIiaiT 401 (480)
-...+..+-...+.+++.+..+...+-++-.|+- -|.|+..+.++--.-.+--+|
T Consensus 337 ~GvfE~~~F~~GT~~l~~aia~~~~~~~a~sivG---GGdT~aai~~~g~~~~~~hvS 391 (415)
T 16pk_A 337 MGVFEMVPYSKGTFAIAKAMGRGTHEHGLMSIIG---GGDSASAAELSGEAKRMSHVS 391 (415)
T ss_dssp SSCTTSGGGCHHHHHHHHHHHHHHHHHCCEEEEC---SHHHHHHHHHTTCTTTSSEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC---CHHHHHHHHHCCCCCCCCEEE
T ss_conf 1454365152899999999998423489989984---879999999739856882797
No 55
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, X-RAY analysis, stability, calorimetry lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=78.41 E-value=3.1 Score=19.79 Aligned_cols=112 Identities=18% Similarity=0.164 Sum_probs=61.2
Q ss_pred CCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHH
Q ss_conf 85325058557734799999862003433555327856631178887533124752222002158767368999999998
Q gi|254780442|r 187 EVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIA 266 (480)
Q Consensus 187 ~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~ 266 (480)
++|.+-+.-. ..++-.+.++.+.+.++..+.=+.-...-+.+.+|.+.|.|.+-.=+-.|+-=.-..+|.-.+..+++.
T Consensus 108 Gv~g~iipDl-p~ee~~~~~~~~~~~gl~~i~lvsptt~~~ri~~i~~~s~gfiY~vs~~GvTG~~~~~~~~~~~~i~~i 186 (248)
T 1geq_A 108 GVDGILVVDL-PVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRA 186 (248)
T ss_dssp TCCEEEETTC-CGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHH
T ss_pred CCCEEEECCC-CHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 9857860578-866766676565216951589857888199998776348971798414555787754320257788875
Q ss_pred HHC-CCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 513-983998057678888288984034778999985199689981
Q gi|254780442|r 267 RQL-GKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 267 ~~~-~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
+++ .+||.+-. -.-|+ .|+..+...|+||+...
T Consensus 187 K~~t~~Pv~vGF---------GI~t~---e~v~~~~~~~ADGVIVG 220 (248)
T 1geq_A 187 KRICRNKVAVGF---------GVSKR---EHVVSLLKEGANGVVVG 220 (248)
T ss_dssp HHHCSSCEEEES---------CCCSH---HHHHHHHHTTCSEEEEC
T ss_pred HCCCCCCEEEEE---------CCCCH---HHHHHHHHCCCCEEEEC
T ss_conf 104678637982---------46999---99999987489999988
No 56
>3g8r_A Probable spore coat polysaccharide biosynthesis protein E; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=78.32 E-value=3.1 Score=19.77 Aligned_cols=99 Identities=14% Similarity=0.242 Sum_probs=64.8
Q ss_pred CCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEH
Q ss_conf 73479999986200343355532785663117888753312475222200215876736899999999851398399805
Q gi|254780442|r 198 SADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIAT 277 (480)
Q Consensus 198 ~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivAT 277 (480)
+.++..++.+++.+.++.+++=+=..++++-++++ ..|.+=||-+|+. ..| +|..+...+||+|+.|
T Consensus 76 s~~~~~~l~~~~k~~gi~f~~s~fd~~s~~~l~~~--~~~~~KIaS~d~~------n~~-----Li~~i~~~~kpiiiSt 142 (350)
T 3g8r_A 76 QPEQMQKLVAEMKANGFKAICTPFDEESVDLIEAH--GIEIIKIASCSFT------DWP-----LLERIARSDKPVVAST 142 (350)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHT--TCCEEEECSSSTT------CHH-----HHHHHHTSCSCEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCC--CCCEEEECCCHHH------HHH-----HHHHHHHHCCCCEEEC
T ss_conf 99999999999862174425262547776565404--8637972441531------047-----9999850058761234
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHH-CCCCEEEECCCCCCCCCHH
Q ss_conf 7678888288984034778999985-1996899814443544658
Q gi|254780442|r 278 QMLESMVTSPFPTRAEVSDVATAVF-EEADAIMLSAETASGSYPV 321 (480)
Q Consensus 278 q~leSM~~~p~PTRaEv~Dvanav~-dG~D~imLs~ETa~G~yP~ 321 (480)
-|. |-.|+....+... .+.+-++|-. +-.||.
T Consensus 143 G~~---------~~~eI~~a~~~~~~~~~~~~llhc---~s~YPt 175 (350)
T 3g8r_A 143 AGA---------RREDIDKVVSFMLHRGKDLTIMHC---VAEYPT 175 (350)
T ss_dssp TTC---------CHHHHHHHHHHHHTTTCCEEEEEC---CCCSSC
T ss_pred CCC---------CHHHHHHHHHHHHCCCCEEEEEEC---CCCCCC
T ss_conf 777---------888866666655325876999614---777899
No 57
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=77.33 E-value=3.3 Score=19.57 Aligned_cols=195 Identities=13% Similarity=0.125 Sum_probs=103.4
Q ss_pred CCHHHHHHHH-HHHHCCCCCEECC-CCCCCCHHHHHHHHHHHC-------CCCEEEEEECCHHHHHHHHHHHHHHHEEEE
Q ss_conf 7655677899-8873488532505-855773479999986200-------343355532785663117888753312475
Q gi|254780442|r 171 LTQKDREDLH-AALQTCEVDWVAL-SFIQSADDLLEIRKIISQ-------NKIGLMSKIEKPRAIEYASEIIQLSDAVMV 241 (480)
Q Consensus 171 ltekD~~di~-~a~~~~~vD~ial-SfVr~~~di~~~r~~l~~-------~~~~IiaKIE~~~al~nl~eI~~~sDgimi 241 (480)
+|..|+..|- ..+++.+||.|-+ ++.-+..+...+++.... ....+.+...+..+++...+.-...-.+.+
T Consensus 38 fs~e~k~~i~~~lL~~~Gv~~IEvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~i~~~~ 117 (337)
T 3ble_A 38 FSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNKTVDWIKDSGAKVLNLLT 117 (337)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTHHHHHHHHHTCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECC
T ss_conf 89999999999999984979899788766867888899999985230033345687650133789999856998786425
Q ss_pred ECCCCCHH----CCHHHHHHHHHHHHHHHHHCCCEEEEEHH-HHHHHHHCCCCCHHHHHHHHHHH-HCCCCEEEECCCCC
Q ss_conf 22220021----58767368999999998513983998057-67888828898403477899998-51996899814443
Q gi|254780442|r 242 ARGDLGVE----MALELIPGIQKKLIRIARQLGKPVVIATQ-MLESMVTSPFPTRAEVSDVATAV-FEEADAIMLSAETA 315 (480)
Q Consensus 242 aRGDLg~e----~~~e~vp~~Qk~ii~~~~~~~kpvivATq-~leSM~~~p~PTRaEv~Dvanav-~dG~D~imLs~ETa 315 (480)
.-.|.-++ ...++....-+.+++.+.+.|..|.+..+ ..++.... -.++.+++..+ ..|+|.|.|. -|+
T Consensus 118 ~~s~~~~~~~~~~~~~~~l~~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Gad~I~l~-DT~ 192 (337)
T 3ble_A 118 KGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNS----PDYVKSLVEHLSKEHIERIFLP-DTL 192 (337)
T ss_dssp ECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHC----HHHHHHHHHHHHTSCCSEEEEE-CTT
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC----HHHHHHHHHHHHHHHCCCCCCC-CCC
T ss_conf 66799999997499999999999999999863975765202356666677----8999889999987511352036-511
Q ss_pred CCCCHHHHHHHHHHHHHHHH-CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCH
Q ss_conf 54465899999999887630-10124444443203878888789999999986104786899970883
Q gi|254780442|r 316 SGSYPVDAVRTMSLVASSAE-RDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASG 382 (480)
Q Consensus 316 ~G~yP~~~v~~~~~i~~~~E-~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG 382 (480)
=...|.++-+....+....- ....+ ....+. -+|.+....|-..+|+. |=-|-.|
T Consensus 193 G~~~P~~v~~lv~~l~~~~~~~~i~~---------H~Hnd~--GlA~AN~laAi~aGa~~-id~tl~G 248 (337)
T 3ble_A 193 GVLSPEETFQGVDSLIQKYPDIHFEF---------HGHNDY--DLSVANSLQAIRAGVKG-LHASING 248 (337)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTSCEEE---------ECBCTT--SCHHHHHHHHHHTTCSE-EEEBGGG
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEE---------EECCCC--CCHHHHHHHHHHHCCCE-EEEECCC
T ss_conf 34786899999999998589974898---------527996--72999999999819819-9950234
No 58
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiative, PSI-2; 2.81A {Galdieria sulphuraria}
Probab=77.32 E-value=3.3 Score=19.57 Aligned_cols=110 Identities=17% Similarity=0.099 Sum_probs=61.2
Q ss_pred EECCCCCCCCHHHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHHH--EEEEECCCCCHHCCHHHHHHHHHHHHHHH
Q ss_conf 25058557734799999862003433-5553278566311788875331--24752222002158767368999999998
Q gi|254780442|r 190 WVALSFIQSADDLLEIRKIISQNKIG-LMSKIEKPRAIEYASEIIQLSD--AVMVARGDLGVEMALELIPGIQKKLIRIA 266 (480)
Q Consensus 190 ~ialSfVr~~~di~~~r~~l~~~~~~-IiaKIE~~~al~nl~eI~~~sD--gimiaRGDLg~e~~~e~vp~~Qk~ii~~~ 266 (480)
.+..|| +.+.++.+|+...+-... ++.-.. .....++-++....+ ++-+.... +-+..++.|
T Consensus 144 v~~~Sf--~~~~l~~~~~~~p~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~------------l~~~~v~~~ 208 (258)
T 2o55_A 144 VDYCSF--HHEALAHLKALCPDVKITYLFNYMG-QPTPLDFVEQACYGDANGVSMLFHY------------LTKEQVCTA 208 (258)
T ss_dssp EEEEES--SHHHHHHHHHHCTTCEEEEECCTTS-CCCCTTHHHHHHHTTCSEEEEEGGG------------CCHHHHHHH
T ss_pred CCCCCC--CHHHHHHHHHHCCCCEEEEEECCCC-CCCHHHHHHHHHHCCCCEEECCCCC------------CCHHHHHHH
T ss_conf 765669--9999999998789971999960466-6786779999885267477413311------------899999999
Q ss_pred HHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 5139839980576788882889840347789999851996899814443544658999999998
Q gi|254780442|r 267 RQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLV 330 (480)
Q Consensus 267 ~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i 330 (480)
++.|++|++-| +.... -+-.++..++.-|+|+||= .||.+..+++.++
T Consensus 209 ~~~Gl~v~vwT------v~~~~---n~~~~~~~l~~~GVdgI~T-------D~P~~~~~~l~~~ 256 (258)
T 2o55_A 209 HEKGLSVTVWM------PWIFD---DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNI 256 (258)
T ss_dssp HHTTCEEEEEC------CTTCC---CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC-
T ss_pred HHCCCEEEEEE------CCCCC---CCHHHHHHHHHCCCCEEEE-------CCHHHHHHHHHHC
T ss_conf 98699899994------77889---8599999999689999997-------9899999999863
No 59
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=76.72 E-value=1.6 Score=21.97 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=23.2
Q ss_pred HCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH
Q ss_conf 1398399805767888828898403477899998519968998144435446589
Q gi|254780442|r 268 QLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVD 322 (480)
Q Consensus 268 ~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~ 322 (480)
...+|+|.+.-+- -..|+..+-.-|++|+.++.==..|+++.+
T Consensus 196 ~~~~pii~~GGv~------------~~~dl~~l~~~g~~gvivgsal~~~~~~~~ 238 (253)
T 1h5y_A 196 SVRIPVIASGGAG------------RVEHFYEAAAAGADAVLAASLFHFRVLSIA 238 (253)
T ss_dssp HCSSCEEEESCCC------------SHHHHHHHHHTTCSEEEESHHHHTTSSCHH
T ss_pred HCCCCEEEECCCC------------CHHHHHHHHHCCCCEEEEHHHHHCCCCCHH
T ss_conf 5699889975999------------999999999789968988568785999999
No 60
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=73.69 E-value=4.1 Score=18.92 Aligned_cols=130 Identities=13% Similarity=0.110 Sum_probs=68.9
Q ss_pred CCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH-HHEEEEECCC-CC---HHCCHHHHHHHHH
Q ss_conf 88532505855773479999986200343355532785663117888753-3124752222-00---2158767368999
Q gi|254780442|r 186 CEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQL-SDAVMVARGD-LG---VEMALELIPGIQK 260 (480)
Q Consensus 186 ~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~-sDgimiaRGD-Lg---~e~~~e~vp~~Qk 260 (480)
.++|++.+.-.-..+-++.+.+...+.+..+..-.-+....++..+.... .|.+.+-++- .+ .-.+...+
T Consensus 79 ~gad~itvh~~~g~~~i~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 153 (216)
T 1q6o_A 79 ANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADI----- 153 (216)
T ss_dssp TTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCCCHHHHHHHHHTTCCEEEEECCHHHHHTTCCCCHHHH-----
T ss_pred HCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCEECCHHHH-----
T ss_conf 499999981317879999999998752221123106999899999888668232102102435878873788899-----
Q ss_pred HHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999985139839980576788882889840347789999851996899814443544658999999998876
Q gi|254780442|r 261 KLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASS 333 (480)
Q Consensus 261 ~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~ 333 (480)
..++.....+.|+.+..-. .| .++..++..|+|++....-=.--..|.++.+-+++-+.+
T Consensus 154 ~~i~~~~~~~~~i~~~gGi--------~~-----~~~~~~~~~Gad~iVVGr~I~~a~dp~~a~~~~~~~i~~ 213 (216)
T 1q6o_A 154 TAIKRLSDMGFKVTVTGGL--------AL-----EDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAE 213 (216)
T ss_dssp HHHHHHHHTTCEEEEESSC--------CG-----GGGGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEECCCC--------CC-----CCHHHHHHCCCCEEEECHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 9999984689738768998--------80-----369999985999999882541799999999999999999
No 61
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=72.41 E-value=4.4 Score=18.71 Aligned_cols=121 Identities=11% Similarity=0.068 Sum_probs=67.7
Q ss_pred ECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 50585577347999998620034335553278566311788875331247522220021587673689999999985139
Q gi|254780442|r 191 VALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLG 270 (480)
Q Consensus 191 ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~ 270 (480)
+..|| +.+.++.+|+... ++.+-.-+...+.+..+......-...+-.- +. . .....+.+++.|++.|
T Consensus 161 ~i~Sf--~~~~l~~l~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~-~~~~~~~~v~~~~~~G 228 (292)
T 3mz2_A 161 MITVH--DGASARFFYEKNP--NFMFEAFVKTKEAVQDYEDNGIPWSHIMAYV---GP----K-ITPEVREVIDMLHERG 228 (292)
T ss_dssp EEEES--SHHHHHHHHHHCT--TCCEEEECCSHHHHHHHHHTTCCGGGEEEEE---ES----S-CCHHHHHHHHHHHHTT
T ss_pred EEEEC--CHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHCCCHHHHHHHC---CC----C-CCCCCHHHHHHHHHCC
T ss_conf 99979--9999999998699--9569998354256678887077165544331---66----5-4305799999999879
Q ss_pred CEEEEEHHHHHHHHHCCCCCH---HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 839980576788882889840---347789999851996899814443544658999999998876301
Q gi|254780442|r 271 KPVVIATQMLESMVTSPFPTR---AEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASSAER 336 (480)
Q Consensus 271 kpvivATq~leSM~~~p~PTR---aEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~E~ 336 (480)
++|.+-|- +++.... .+..+....+..|+|+|+= .||.+..+++.+.+...++
T Consensus 229 ~~v~~wTv------n~~~~~~~~~~~~~~~~~l~~lGVdgI~T-------D~P~~l~~~l~~~~~~~~~ 284 (292)
T 3mz2_A 229 VMCMISTA------PSDDKLSTPESRAEAYRMIIRQGVDIIES-------DRPIEVAEAISSLIPVSSS 284 (292)
T ss_dssp BCEEEECT------TTGGGSSSHHHHHHHHHHHHHTTCCEEEE-------SCHHHHHHHHGGGSCSSCT
T ss_pred CEEEEECC------CCHHHHHHCCCCHHHHHHHHHCCCCEEEE-------CCHHHHHHHHHHHCCCCCC
T ss_conf 98999887------86676321138799999999769999996-------9899999999860801145
No 62
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=72.04 E-value=4.4 Score=18.65 Aligned_cols=62 Identities=16% Similarity=0.257 Sum_probs=44.5
Q ss_pred CCC-CCEEEEECCC-CCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf 777-5269994187-7579999999997399789998888898999999999999999749927
Q gi|254780442|r 3 NLR-RIKIISTLGP-SSFSEDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELRSRRPI 64 (480)
Q Consensus 3 ~mr-ktKIi~TlGP-as~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i 64 (480)
+|| |.|+.+=--| .+...+.+++.+++|++.+-+-.-..+.++..+....++++..+.+.++
T Consensus 10 ~~~~~l~Ly~ITd~~~~~~~~~v~~al~~Gv~~iqlR~K~~~~~~~~~~a~~l~~i~~~~~~~l 73 (215)
T 1xi3_A 10 NLRNKLKLYVITDRRLKPEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDALF 73 (215)
T ss_dssp CHHHHTSEEEECCTTTSCHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CHHHCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEE
T ss_conf 7335876999928863888999999998799999987799899999999999999999849989
No 63
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=71.93 E-value=4.5 Score=18.63 Aligned_cols=85 Identities=14% Similarity=0.234 Sum_probs=67.3
Q ss_pred ECCCCCCCCHHHHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHH-------------HEEEEECCCCCHHCC--
Q ss_conf 505855773479999986200----3433555327856631178887533-------------124752222002158--
Q gi|254780442|r 191 VALSFIQSADDLLEIRKIISQ----NKIGLMSKIEKPRAIEYASEIIQLS-------------DAVMVARGDLGVEMA-- 251 (480)
Q Consensus 191 ialSfVr~~~di~~~r~~l~~----~~~~IiaKIE~~~al~nl~eI~~~s-------------DgimiaRGDLg~e~~-- 251 (480)
+-+|.++++.||.++--+.+. ..+.|+.=-||.++|+|-.+|+..- -.||+.=-|=+-+.|
T Consensus 472 yIISmt~s~sDvL~v~~Lak~~G~~~~l~IvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~KDgG~l 551 (883)
T 1jqn_A 472 YVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVM 551 (883)
T ss_dssp EEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHHHHCHH
T ss_pred HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCCCHH
T ss_conf 32106788205999999999809876567677507499998439999999658899999843645443245444420187
Q ss_pred --HHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf --767368999999998513983998
Q gi|254780442|r 252 --LELIPGIQKKLIRIARQLGKPVVI 275 (480)
Q Consensus 252 --~e~vp~~Qk~ii~~~~~~~kpviv 275 (480)
-..+..+|+.+.+.|.++|-.+..
T Consensus 552 aa~w~ly~aq~~l~~~~~~~gv~l~~ 577 (883)
T 1jqn_A 552 AASWAQYQAQDALIKTCEKAGIELTL 577 (883)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 77899999999999999974972699
No 64
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=70.45 E-value=4.8 Score=18.41 Aligned_cols=85 Identities=15% Similarity=0.277 Sum_probs=67.3
Q ss_pred ECCCCCCCCHHHHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHH-------------HEEEEECCCCCHHCC--
Q ss_conf 505855773479999986200----3433555327856631178887533-------------124752222002158--
Q gi|254780442|r 191 VALSFIQSADDLLEIRKIISQ----NKIGLMSKIEKPRAIEYASEIIQLS-------------DAVMVARGDLGVEMA-- 251 (480)
Q Consensus 191 ialSfVr~~~di~~~r~~l~~----~~~~IiaKIE~~~al~nl~eI~~~s-------------DgimiaRGDLg~e~~-- 251 (480)
+-+|++++++||.++--+.+. ..+.|+.=-||.+.|+|-.+|++.- -.||+.=-|=+-+.|
T Consensus 532 yIISmt~s~sDlL~V~lL~ke~g~~~~l~vvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVMlGYSDS~KDgG~l 611 (970)
T 1jqo_A 532 YIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDAGRL 611 (970)
T ss_dssp EEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHHSCHH
T ss_pred EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCEEEEECCCCCCCCHHHH
T ss_conf 12226887678999999999838877767563114499999659999999848477765223527886246555410088
Q ss_pred --HHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf --767368999999998513983998
Q gi|254780442|r 252 --LELIPGIQKKLIRIARQLGKPVVI 275 (480)
Q Consensus 252 --~e~vp~~Qk~ii~~~~~~~kpviv 275 (480)
-..+..+|+.+...|+++|-.+..
T Consensus 612 aa~W~ly~Aq~~L~~v~~~~gV~l~l 637 (970)
T 1jqo_A 612 SAAWQLYRAQEEMAQVAKRYGVKLTL 637 (970)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 88999999999999999975974999
No 65
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=70.03 E-value=4.9 Score=18.35 Aligned_cols=54 Identities=20% Similarity=0.227 Sum_probs=31.7
Q ss_pred CCCCHHHHHHHHHCCCCEEEEECCCCC----------HHHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 757999999999739978999888889----------89999999999999997499279999878
Q gi|254780442|r 16 SSFSEDVINRLHEEGTDVFRINMSHTS----------HDKMCELIKKIRAVELRSRRPIGILIDLQ 71 (480)
Q Consensus 16 as~~~e~i~~l~~aG~nv~RiN~SHg~----------~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 71 (480)
...+++-++.|...|+|.+||.+++.. .+...+.++.+=+...+.|. .+++|+-
T Consensus 35 ~~~te~D~~~ia~~GfN~VRlpv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi--~vildlH 98 (341)
T 1vjz_A 35 GNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGI--HICISLH 98 (341)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTC--EEEEEEE
T ss_pred CCCCHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC--EEEEEEC
T ss_conf 788799999999869988993066999158888776598999999999999998799--8999726
No 66
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, amino-acid biosynthesis cobalamin, precorrin, novel fold; 2.10A {Thermotoga maritima}
Probab=69.64 E-value=2.7 Score=20.29 Aligned_cols=127 Identities=12% Similarity=0.111 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHCCCCCEECCC--CCCCCHHHHHHHHHHHCC---CCEEEEEECCH-----------HH----HHHHHHHH
Q ss_conf 567789988734885325058--557734799999862003---43355532785-----------66----31178887
Q gi|254780442|r 174 KDREDLHAALQTCEVDWVALS--FIQSADDLLEIRKIISQN---KIGLMSKIEKP-----------RA----IEYASEII 233 (480)
Q Consensus 174 kD~~di~~a~~~~~vD~ialS--fVr~~~di~~~r~~l~~~---~~~IiaKIE~~-----------~a----l~nl~eI~ 233 (480)
++.++++..+.. ++|-|.++ |..++....++.+.+.+. .-.|+.-|.-+ .+ -.++.+.+
T Consensus 84 r~~ed~~~ll~~-GadkVii~s~~~~~~~~~~~i~~~~~~~gg~~q~IvvsiD~k~~~~~~~i~~~~~~~~~~~~~~~~~ 162 (266)
T 2w6r_A 84 GKMEHFLEAFLA-GADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWV 162 (266)
T ss_dssp CSTHHHHHHHHH-TCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHH
T ss_pred CCCCCHHHHHHH-HHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHH
T ss_conf 120210033322-0000011332245511226678999985898649999987675279558997678501687202335
Q ss_pred H-----HHHEEEE---ECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
Q ss_conf 5-----3312475---2222002158767368999999998513983998057678888288984034778999985199
Q gi|254780442|r 234 Q-----LSDAVMV---ARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEA 305 (480)
Q Consensus 234 ~-----~sDgimi---aRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~ 305 (480)
+ -+..+++ +|.-...-..++-+ -..++....|+|.+.-+= ...|+.++...|+
T Consensus 163 ~~~~~~g~geil~t~V~~DGt~~G~d~~l~-------~~i~~~~~~piI~sGGi~------------s~~di~~l~~~g~ 223 (266)
T 2w6r_A 163 VEVEKRGAGEILLTSIDRDGTKSGYDTEMI-------RFVRPLTTLPIIASGGAG------------KMEHFLEAFLAGA 223 (266)
T ss_dssp HHHHHTTCSEEEEEETTTTTTCSCCCHHHH-------HHHGGGCCSCEEEESCCC------------SHHHHHHHHHHTC
T ss_pred HHHHCCCCCEEEEEEECCCCCCCCCCHHHH-------HHHHHCCCCCEEEEECCC------------CHHHHHHHHHCCC
T ss_conf 433155858589988878798688767999-------999861897789994799------------9999999997899
Q ss_pred CEEEECCCCCCCCCH
Q ss_conf 689981444354465
Q gi|254780442|r 306 DAIMLSAETASGSYP 320 (480)
Q Consensus 306 D~imLs~ETa~G~yP 320 (480)
||+..+.==..|++.
T Consensus 224 ~gvi~gs~~~~~~~~ 238 (266)
T 2w6r_A 224 DAALAASVFHFREID 238 (266)
T ss_dssp SEEEESTTTC-----
T ss_pred CEEEEEEHHHCCCCC
T ss_conf 799980055659999
No 67
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* 2p9q_A* 2paa_A*
Probab=63.11 E-value=6.5 Score=17.41 Aligned_cols=318 Identities=14% Similarity=0.179 Sum_probs=151.0
Q ss_pred CHHHHHHHHHCCCCEEEEECCCCC------HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEE--EECCCCCEEECCC
Q ss_conf 999999999739978999888889------89999999999999997499279999878986788--6548981896589
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSHTS------HDKMCELIKKIRAVELRSRRPIGILIDLQGPKFRV--GKFANSKVDLTEG 90 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SHg~------~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkiR~--g~~~~~~i~l~~G 90 (480)
+..+|+.|++.|....=| +||-. .++...+-.-.+.+++.++++|...-|.-|+..+- ..++++.|-|-++
T Consensus 42 ~lpTI~~l~~~gak~Vil-~SH~GRP~g~~~~~~~SL~~va~~L~~~L~~~V~fv~d~~g~~~~~~i~~l~~geI~LLEN 120 (416)
T 2wzb_A 42 AVPSIKFCLDNGAKSVVL-MSHLGRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLEN 120 (416)
T ss_dssp HHHHHHHHHHTTCSEEEE-ECCCSCCTTSCCHHHHCSHHHHHHHHHHHTSCCEECSCSSSHHHHHHHHSCCTTEEEECCC
T ss_pred HHHHHHHHHHCCCCEEEE-EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCEEEHHH
T ss_conf 999999999879998999-7078899998678657889999999997689707647533588888764136671887443
Q ss_pred CEEEEECCCCCCCCC----CCC---CCCCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEECCCCCCCCC
Q ss_conf 999995324556444----221---2664422211336526740684221023445411245513880871145644678
Q gi|254780442|r 91 QIFTLDNKDSLGSSD----RVM---LPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKVIAGISIADRKGISFPD 163 (480)
Q Consensus 91 ~~v~l~~~~~~~~~~----~i~---i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvnip~ 163 (480)
= +|...+...+.+ ... -+...|.+.+.+.-.+|++|..= +--..--+ --|+.+|.
T Consensus 121 v--RF~~eE~~n~~~~~~~~~~~e~~~~~~fa~~LA~laDvyVNDAF~---~aHR~haS-------------~vgi~~~~ 182 (416)
T 2wzb_A 121 L--RFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFG---TAHRAHSS-------------MVGVNLPQ 182 (416)
T ss_dssp G--GGSHHHHTCC----------CHHHHHHHHHHHHHTCSEEEECCGG---GTTCCCHH-------------HHCCCCSC
T ss_pred H--HHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCC---CCCCCCCC-------------CCCCCCCC
T ss_conf 3--305210024644100014333677899999986325799624522---12555541-------------02504640
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEE--EEECCHHHHHHHHHHHHHHHEEEE
Q ss_conf 544555676556778998873488532505855773479999986200343355--532785663117888753312475
Q gi|254780442|r 164 TFLTTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLM--SKIEKPRAIEYASEIIQLSDAVMV 241 (480)
Q Consensus 164 ~~i~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~Ii--aKIE~~~al~nl~eI~~~sDgimi 241 (480)
. -...|-++..+.+.-++++..=.++ -|+ |||+++..+ ++..++.+|.+++
T Consensus 183 ~--~aG~l~ekEl~~L~~~l~~~~rP~v-----------------------aIlGGaKisdKi~v--i~~Ll~k~d~iii 235 (416)
T 2wzb_A 183 K--AGGFLMKKELNYFAKALESPERPFL-----------------------AILGGAKVADKIQL--INNMLDKVNEMII 235 (416)
T ss_dssp E--EECHHHHHHHHHHHHHHHSCCSSEE-----------------------EEECSSCHHHHGGG--HHHHTTTCSEEEE
T ss_pred C--CHHHHHHHHHHHHHHHHHCCCCCCE-----------------------EEEECCCCCCHHHH--HHHHHHHCCCEEE
T ss_conf 0--0178999999999999838788847-----------------------99843762228999--9999863283896
Q ss_pred ECC------------CCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 222------------20021587673689999999985139839980576788882889840347789999851996899
Q gi|254780442|r 242 ARG------------DLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIM 309 (480)
Q Consensus 242 aRG------------DLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~im 309 (480)
.=| ++|...--++.-..-+.++.+|++.++.++.-....-+=..+..+.+.++.+ .+.+-++- ..
T Consensus 236 gG~~antfl~a~~G~~iG~s~~e~~~~~~~~~i~~~a~~~~~ki~lP~D~~v~~~~~~~~~~~~~~~-~~~i~~~~--~i 312 (416)
T 2wzb_A 236 GGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATV-ASGIPAGW--MG 312 (416)
T ss_dssp CGGGHHHHHHHHHCCCCTTSCCCHHHHTTHHHHHHHHHHTTCEEECCCEEEEESSSSTTCCEEEEET-TTCCCTTC--EE
T ss_pred CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCCCCCCCCEEEE-CCCCCCCC--CC
T ss_conf 6099999999964985576541056679999999999872982500345401103466766306620-13214786--00
Q ss_pred ECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH
Q ss_conf 81444354465899999999887630101244444432038788887899999999861047868999708837999998
Q gi|254780442|r 310 LSAETASGSYPVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGLRAA 389 (480)
Q Consensus 310 Ls~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS 389 (480)
|- +| -++++...+++..++. ..|.-.-...+..+-...+.+++.+..+...+ ++-.|+ --|.|+..+.
T Consensus 313 ~D----IG---~~Ti~~~~~~I~~a~t-I~wNGP~GvfE~~~F~~GT~~l~~~i~~~~~~-~a~siv---GGGdT~aai~ 380 (416)
T 2wzb_A 313 LD----CG---PESSKKYAEAVTRAKQ-IVWNGPVGVFEWEAFARGTKALMDEVVKATSR-GCITII---GGGDTATCCA 380 (416)
T ss_dssp EE----EC---HHHHHHHHHHHHHCSE-EEEESCSSCTTSGGGCHHHHHHHHHHHHHHHT-TCEEEE---ESTTHHHHHH
T ss_pred CC----CC---HHHHHHHHHHHCCCCE-EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCEEEE---ECHHHHHHHH
T ss_conf 13----56---3778999998715888-99967855555761538999999999974048-998999---3779999999
Q ss_pred HHCCCCCE
Q ss_conf 41888869
Q gi|254780442|r 390 RERPKLEI 397 (480)
Q Consensus 390 ~~RP~~pI 397 (480)
++.-.-.+
T Consensus 381 ~~g~~~~~ 388 (416)
T 2wzb_A 381 KWNTEDKV 388 (416)
T ss_dssp HTTCTTSS
T ss_pred HCCCCCCC
T ss_conf 73986799
No 68
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2- epimerase; structural genomics, PSI, protein structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=62.71 E-value=6.6 Score=17.36 Aligned_cols=120 Identities=13% Similarity=0.057 Sum_probs=65.6
Q ss_pred CCCCEECCCCC----CCCHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCC---CHHCCHHHHH
Q ss_conf 88532505855----773479999986200--34335553278566311788875331247522220---0215876736
Q gi|254780442|r 186 CEVDWVALSFI----QSADDLLEIRKIISQ--NKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDL---GVEMALELIP 256 (480)
Q Consensus 186 ~~vD~ialSfV----r~~~di~~~r~~l~~--~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDL---g~e~~~e~vp 256 (480)
.++|.+.+.+. .....+.+.-+.+.. ..+.++.-+.|.+..... +-..+|.|.+--.++ +...+...++
T Consensus 100 aga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~t~~~~~~~--~~~g~d~i~~~~~~~~~~~~~~~~~~~~ 177 (234)
T 1yxy_A 100 LNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVA--HQAGIDFVGTTLSGYTPYSRQEAGPDVA 177 (234)
T ss_dssp TTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHH--HHTTCSEEECTTTTSSTTSCCSSSCCHH
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH--HHCCCCEEEECCCCCCCCCCCCCHHHHH
T ss_conf 59985899831687433578999999997427996687337999999999--9749998984164465777677416799
Q ss_pred HHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH
Q ss_conf 89999999985139839980576788882889840347789999851996899814443544658999999
Q gi|254780442|r 257 GIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTM 327 (480)
Q Consensus 257 ~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~ 327 (480)
+...+.....|||.+.-+-. ..|++.+..-|+|+||.. ||+. .|.+-.+.+
T Consensus 178 -----~~~~~~~~~ipvia~GGI~~------------~~d~~~al~~GAdgV~vG--sAi~-~p~~i~~~~ 228 (234)
T 1yxy_A 178 -----LIEALCKAGIAVIAEGKIHS------------PEEAKKINDLGVAGIVVG--GAIT-RPKEIAERF 228 (234)
T ss_dssp -----HHHHHHHTTCCEEEESCCCS------------HHHHHHHHTTCCSEEEEC--HHHH-CHHHHHHHH
T ss_pred -----HHHHHHCCCCCEEEECCCCC------------HHHHHHHHHCCCCEEEEC--HHHC-CHHHHHHHH
T ss_conf -----99987147981898799999------------999999998699999989--3545-989999999
No 69
>1vp4_A Aminotransferase, putative; TM1131, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima MSB8} SCOP: c.67.1.1
Probab=62.65 E-value=6.7 Score=17.35 Aligned_cols=20 Identities=15% Similarity=0.288 Sum_probs=11.7
Q ss_pred HHHHHHH--CCCCEEEEECCCCCH
Q ss_conf 9999997--399789998888898
Q gi|254780442|r 22 VINRLHE--EGTDVFRINMSHTSH 43 (480)
Q Consensus 22 ~i~~l~~--aG~nv~RiN~SHg~~ 43 (480)
.|+++.+ ++-|+ |||+.|.+
T Consensus 32 ~ir~~~~~~~~~~~--I~l~~G~P 53 (425)
T 1vp4_A 32 IIREILKFAADKDA--ISFGGGVP 53 (425)
T ss_dssp CHHHHTTTTTSTTC--EECCCCSC
T ss_pred HHHHHHHHHCCCCC--EECCCCCC
T ss_conf 89999998579998--88999688
No 70
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=62.12 E-value=6.8 Score=17.28 Aligned_cols=157 Identities=17% Similarity=0.158 Sum_probs=75.9
Q ss_pred CCEEEEEECCHHHHHHHHH------HHH-----HHHEEEE-ECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHH
Q ss_conf 4335553278566311788------875-----3312475-222200215876736899999999851398399805767
Q gi|254780442|r 213 KIGLMSKIEKPRAIEYASE------IIQ-----LSDAVMV-ARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQML 280 (480)
Q Consensus 213 ~~~IiaKIE~~~al~nl~e------I~~-----~sDgimi-aRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~l 280 (480)
+..|+.|-|..+-.--+++ +.+ ....+.. .-|..| ..+-..|+.+|.|+++..
T Consensus 40 g~~i~~K~E~~nptGS~KdRga~~~l~~~~~~~~~~~vv~~ssGN~g------------~a~A~~a~~~g~~~~i~~--- 104 (323)
T 1v71_A 40 VAEVFFKCENFQKMGAFKFRGALNALSQLNEAQRKAGVLTFSSGNHA------------QAIALSAKILGIPAKIIM--- 104 (323)
T ss_dssp TSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHHHHHCEEECCSSHHH------------HHHHHHHHHTTCCEEEEE---
T ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH------------HHHHHHHCCCCCCEEECC---
T ss_conf 99699997789987898999999999987761577769984797288------------999987200543215226---
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 88882889840347789999851996899814443544658999999998876301012444444320387888878999
Q gi|254780442|r 281 ESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVIS 360 (480)
Q Consensus 281 eSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa 360 (480)
-.+..+. -+...-..|+.-+...+. ..++.....+.+++-. +.....+ . .........
T Consensus 105 ---p~~~~~~-----k~~~~~~~Ga~vi~~~~~------~~~~~~~a~~~a~~~~----~~~~~~~---~-~~~~~~g~~ 162 (323)
T 1v71_A 105 ---PLDAPEA-----KVAATKGYGGQVIMYDRY------KDDREKMAKEISEREG----LTIIPPY---D-HPHVLAGQG 162 (323)
T ss_dssp ---ETTCCHH-----HHHHHHHTTCEEEEECTT------TTCHHHHHHHHHHHHT----CBCCCSS---S-SHHHHHHHT
T ss_pred ---CCCCCHH-----HHHHHHHCCCCEEEECCC------CHHHHHHHHHHHHHCC----CEECCCC---C-CHHHHHHHH
T ss_conf ---7778889-----999999829977995574------1379999999998639----9946988---8-467999999
Q ss_pred HHHHHHHHCC-CCCEEEEECCCHHHH----HHHHHHCCCCCEEEEECCHHH
Q ss_conf 9999986104-786899970883799----999841888869999299899
Q gi|254780442|r 361 SAARQIAETL-RLSAIFCYTASGATG----LRAARERPKLEIIALSPMIQT 406 (480)
Q Consensus 361 ~aav~lA~~l-~a~aIiv~T~sG~tA----~~iS~~RP~~pIiaiT~~~~t 406 (480)
..+-++..++ +.+++++.+-+|.+. +.+....|...|+++.+....
T Consensus 163 t~~~Ei~~q~~~~d~vv~~~G~Gg~~~Gi~~~~~~~~~~~~ii~v~~~~~~ 213 (323)
T 1v71_A 163 TAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGN 213 (323)
T ss_dssp HHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGC
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 999999985489899999378278899999999975998538611445551
No 71
>3etn_A Putative phosphosugar isomerase involved in capsule formation; YP_209877.1, structural genomics; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=60.14 E-value=4.8 Score=18.37 Aligned_cols=40 Identities=20% Similarity=0.169 Sum_probs=28.1
Q ss_pred CCCCEEEEECCCHHHHHHH-----HH-HCCCCCEEEEECCH--HHHHH
Q ss_conf 4786899970883799999-----84-18888699992998--99987
Q gi|254780442|r 370 LRLSAIFCYTASGATGLRA-----AR-ERPKLEIIALSPMI--QTARR 409 (480)
Q Consensus 370 l~a~aIiv~T~sG~tA~~i-----S~-~RP~~pIiaiT~~~--~t~r~ 409 (480)
-.-+.+|++|.||+|...+ ++ +...+|++++|.++ ..++.
T Consensus 105 ~~~DvlI~iS~SG~T~evi~~~~~ak~~~~~~~vI~IT~~~~S~lak~ 152 (220)
T 3etn_A 105 QENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASE 152 (220)
T ss_dssp CTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
T ss_conf 888889998289986658888999874046871588860588742135
No 72
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=60.00 E-value=4.6 Score=18.51 Aligned_cols=60 Identities=20% Similarity=0.303 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHH--CCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 87673689999999985139839980576788882--88984034778999985199689981
Q gi|254780442|r 251 ALELIPGIQKKLIRIARQLGKPVVIATQMLESMVT--SPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 251 ~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~--~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
..+.+-.+-+.+-..|.+++.||++.+|+=..-.. ..+|+-+.+.+ +.++.+.||.+|+=
T Consensus 202 ~~~~i~~i~~~Lk~lA~~~~i~ii~lsQlnr~~~~~~~~~p~~~dl~g-S~~Ieq~AD~vl~l 263 (315)
T 3bh0_A 202 RTNQISQISRDLKKMARELDVVVIALSQLSRQVEQRQDKRPMLSDLRE-SGQLEQDADIIEFL 263 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCEEEEEECCCGGGTTSSSCCCCGGGGTT-TSHHHHHCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHH-HHHHHHHCCEEEEE
T ss_conf 999999999999999997399789997536320114688766222333-35557538499999
No 73
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=59.99 E-value=3.7 Score=19.25 Aligned_cols=14 Identities=43% Similarity=0.707 Sum_probs=11.5
Q ss_pred HHHEEEEECCCCCH
Q ss_conf 33124752222002
Q gi|254780442|r 235 LSDAVMVARGDLGV 248 (480)
Q Consensus 235 ~sDgimiaRGDLg~ 248 (480)
.+|||||+||=|+-
T Consensus 206 g~dGVMIGRgal~n 219 (318)
T 1vhn_A 206 GCDGLLVARGAIGR 219 (318)
T ss_dssp CCSEEEESGGGTTC
T ss_pred CCCEEEECHHHHHC
T ss_conf 89979971765719
No 74
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans}
Probab=59.03 E-value=7.6 Score=16.91 Aligned_cols=63 Identities=11% Similarity=0.110 Sum_probs=33.8
Q ss_pred HHHHHHHHHCCCEEEEEHHH-HHHHHHCCCCCHHHHHHHHHHH-HCCC--CEEEECCCC-CCCCCHHHHHHHHHHHHHH
Q ss_conf 99999985139839980576-7888828898403477899998-5199--689981444-3544658999999998876
Q gi|254780442|r 260 KKLIRIARQLGKPVVIATQM-LESMVTSPFPTRAEVSDVATAV-FEEA--DAIMLSAET-ASGSYPVDAVRTMSLVASS 333 (480)
Q Consensus 260 k~ii~~~~~~~kpvivATq~-leSM~~~p~PTRaEv~Dvanav-~dG~--D~imLs~ET-a~G~yP~~~v~~~~~i~~~ 333 (480)
+.+...|.+++.||++-+.. ++. ..++...+ --|. +-|.|=--+ +.|+-..+..+.|.+|-+.
T Consensus 163 ~~m~~~a~~~~~pvi~~~~~d~~~-----------~k~l~~~l~~~GI~~~~IilDPGig~fGk~~e~~~~~~~~iR~~ 230 (310)
T 2h9a_B 163 KPIVATCMVHGHSVVASAPLDINL-----------SKQLNIMIMEMNLAPNRIIMDPLIGALGYGIEYSYSIIERMRLG 230 (310)
T ss_dssp HHHHHHHHHHTCEEEEECSSCHHH-----------HHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCHHH-----------HHHHHHHHHHCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 899999998299899987853899-----------99999999986999778898157643467888999999999987
No 75
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 1loq_A* 1lor_A* 1kly_A* 3lhz_A* 3m44_A 3lhw_A* ...
Probab=58.42 E-value=7.8 Score=16.84 Aligned_cols=82 Identities=16% Similarity=0.187 Sum_probs=52.5
Q ss_pred HHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHH
Q ss_conf 77899887348853250585577347999998620034335553278566311788875331247522220021587673
Q gi|254780442|r 176 REDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELI 255 (480)
Q Consensus 176 ~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~v 255 (480)
.+..+.+.+ .+++.+ +..+.+++++..+|+.++....-+..-|-.+ + .+.++..+.+|.+.|.|+=...+=|.+..
T Consensus 140 ~~~~~l~~~-~g~~g~-v~~~~~~~ei~~ir~~~~~~~~~vtPGI~~~-g-~~~~d~~~~ad~iIvGR~I~~a~dP~~~a 215 (228)
T 3m47_A 140 DEIARMGVD-LGVKNY-VGPSTRPERLSRLREIIGQDSFLISPGVGAQ-G-GDPGETLRFADAIIVGRSIYLADNPAAAA 215 (228)
T ss_dssp HHHHHHHHH-TTCCEE-ECCSSCHHHHHHHHHHHCSSSEEEECC-----------CGGGTCSEEEECHHHHTSSCHHHHH
T ss_pred HHHHHHHHH-HCCCCC-CCCCCCHHHHHHHHHHCCCCCEEEECCCCCC-C-CCHHHHHHHCCEEEECCHHCCCCCCCHHH
T ss_conf 999999997-188750-2255789999999984598717996676578-8-99778875499999890020399965179
Q ss_pred HHHHHH
Q ss_conf 689999
Q gi|254780442|r 256 PGIQKK 261 (480)
Q Consensus 256 p~~Qk~ 261 (480)
-.+-+.
T Consensus 216 ~~~~~~ 221 (228)
T 3m47_A 216 AGAIES 221 (228)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999
No 76
>1o0y_A Deoxyribose-phosphate aldolase; TM1559, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: c.1.10.1
Probab=58.31 E-value=7.8 Score=16.83 Aligned_cols=188 Identities=14% Similarity=0.102 Sum_probs=104.0
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH--------HH
Q ss_conf 4555676556778998873488532505855773479999986200343355532785663117888753--------31
Q gi|254780442|r 166 LTTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQL--------SD 237 (480)
Q Consensus 166 i~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~--------sD 237 (480)
+=-|..|+.|.+.+---+.+.++.-|+ =++..+..+|+.|...++++.+=|-=|.|-...+..+.+ +|
T Consensus 51 lL~p~~T~~~i~~~c~~A~~~~~~aVC----V~P~~v~~a~~~L~gs~v~v~tVigFP~G~~~~~~K~~E~~~Av~~GAd 126 (260)
T 1o0y_A 51 NLKPFATPDDIKKLCLEARENRFHGVC----VNPCYVKLAREELEGTDVKVVTVVGFPLGANETRTKAHEAIFAVESGAD 126 (260)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHTCSEEE----ECGGGHHHHHHHHTTSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEE----ECHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 799889999999999998525982899----8999999999981589834899840798887588999999999986998
Q ss_pred EE--EEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHH-HHHCCCCEEEECCCC
Q ss_conf 24--752222002158767368999999998513983998057678888288984034778999-985199689981444
Q gi|254780442|r 238 AV--MVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVAT-AVFEEADAIMLSAET 314 (480)
Q Consensus 238 gi--miaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvan-av~dG~D~imLs~ET 314 (480)
.| .+..|.|- +=..+.+-.--+.+...|...--.||+-|..|. ..|+-.... ++.-|+|-|=-|.--
T Consensus 127 EID~Vin~~~l~-~g~~~~v~~Ei~~v~~a~~~~~lKVIlEt~~L~---------~~ei~~a~~ia~~aGadfVKTSTGf 196 (260)
T 1o0y_A 127 EIDMVINVGMLK-AKEWEYVYEDIRSVVESVKGKVVKVIIETCYLD---------TEEKIAACVISKLAGAHFVKTSTGF 196 (260)
T ss_dssp EEEEECCHHHHH-TTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCC---------HHHHHHHHHHHHHTTCSEEECCCSS
T ss_pred EEEEEECHHHHC-CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC---------CHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 799861388871-585999999999999870631020233034588---------0899999999998398869847998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 3544658999999998876301012444444320387888878999999998610478689997088379
Q gi|254780442|r 315 ASGSYPVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGAT 384 (480)
Q Consensus 315 a~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~t 384 (480)
+.|--..+.|+.|.+.+.. .-..+-.....+..+++..- .++|..|= |.||..
T Consensus 197 ~~~gat~e~V~lm~~~~~~---------~~gIKasGGIrt~~~a~~~l------~aGa~riG--tSs~~~ 249 (260)
T 1o0y_A 197 GTGGATAEDVHLMKWIVGD---------EMGVKASGGIRTFEDAVKMI------MYGADRIG--TSSGVK 249 (260)
T ss_dssp SSCCCCHHHHHHHHHHHCT---------TSEEEEESSCCSHHHHHHHH------HTTCSEEE--ESCHHH
T ss_pred CCCCCCHHHHHHHHHHHCC---------CCEEECCCCCCCHHHHHHHH------HHHHHHHC--CCCHHH
T ss_conf 8999899999999998487---------87586867989999999999------98407745--574899
No 77
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=57.35 E-value=3.2 Score=19.70 Aligned_cols=50 Identities=8% Similarity=0.044 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHEEEEECCCCC---HHCCHHHHHHHHHHHHHHHHHCCCEE-EEEHH
Q ss_conf 5663117888753312475222200---21587673689999999985139839-98057
Q gi|254780442|r 223 PRAIEYASEIIQLSDAVMVARGDLG---VEMALELIPGIQKKLIRIARQLGKPV-VIATQ 278 (480)
Q Consensus 223 ~~al~nl~eI~~~sDgimiaRGDLg---~e~~~e~vp~~Qk~ii~~~~~~~kpv-ivATq 278 (480)
+-|+..||.++ .| +.||+|- .-.+.-|--.+...+...| ..|+|| +...+
T Consensus 181 ~TG~~~LD~~~---gG--~~~G~L~viaarpg~GKT~~al~la~~~~-~~g~~v~~~SlE 234 (444)
T 3bgw_A 181 PSGFTELDRMT---YG--YKRRNFVLIAARPSMGKTAFALKQAKNMS-DNDDVVNLHSLE 234 (444)
T ss_dssp CCSCHHHHHHH---SS--BCSSCEEEEEECSSSSHHHHHHHHHHHHH-HTTCEEEEECSS
T ss_pred ECCCCCHHHHH---CC--CCCCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCCHHCCHHH
T ss_conf 24875657771---48--78887699850799874799999999753-125513105141
No 78
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=56.97 E-value=8.2 Score=16.67 Aligned_cols=52 Identities=15% Similarity=0.389 Sum_probs=33.2
Q ss_pred CCHHHHHHHHHCCCCEEEEECCCCC----------HHHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 7999999999739978999888889----------89999999999999997499279999878
Q gi|254780442|r 18 FSEDVINRLHEEGTDVFRINMSHTS----------HDKMCELIKKIRAVELRSRRPIGILIDLQ 71 (480)
Q Consensus 18 ~~~e~i~~l~~aG~nv~RiN~SHg~----------~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 71 (480)
-.++.|+.|.+.|+|.+||-+++.. .++..+.++.+=....+.| +-+++|+-
T Consensus 46 ~tkedI~~ik~~GfN~vRipisW~~~~~~~~~~~in~~~l~~~d~vId~a~~~G--i~viLdlH 107 (515)
T 3icg_A 46 TTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND--MYVIINLH 107 (515)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTT--CEEEEECC
T ss_pred CCHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEECC
T ss_conf 669999999987998899701289807888887449999999999999999789--99999677
No 79
>1to6_A Glycerate kinase; glycerate metabolism, structural genomics T831, PSI, protein structure initiative; 2.50A {Neisseria meningitidis serogroup A} SCOP: c.141.1.1
Probab=56.21 E-value=7.8 Score=16.84 Aligned_cols=64 Identities=19% Similarity=0.225 Sum_probs=51.3
Q ss_pred CCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEE-EHHHH
Q ss_conf 433555327856631178887533124752222002158767368999999998513983998-05767
Q gi|254780442|r 213 KIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVI-ATQML 280 (480)
Q Consensus 213 ~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpviv-ATq~l 280 (480)
+.++.+=+|--.-+-||++-++.+|-|+-.-|-+-.+...-|+|.. +.+ ..++++|||+ +.++-
T Consensus 256 ~a~l~~G~~~v~~~~~l~~~i~~aDlVITGEG~~D~Qsl~GK~p~~---Va~-~ak~~vPviai~G~v~ 320 (371)
T 1to6_A 256 QASIVSGIDTCLDLIDFDKKVSDVDLVIVGEGRLDRQSLAGKAPIG---VAK-RTPVGVPVVAICGSLV 320 (371)
T ss_dssp CCEEEEHHHHHHHHTTHHHHTTTCSEEEECCSEECSTTTTTCHHHH---HHT-TSCTTCCEEEEESEEC
T ss_pred CCEECCHHHHHHHHHCHHHHHCCCCEEEECCCCCCCCCCCCCHHHH---HHH-HHHCCCCEEEEECCCC
T ss_conf 8886664999998617998817999999899867644668878999---999-9767998899978777
No 80
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes}
Probab=55.66 E-value=8.6 Score=16.53 Aligned_cols=89 Identities=13% Similarity=0.104 Sum_probs=49.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECC----CH-HHHHHHHHHCCCCCEEEEECCH-HHHHHHHHHCCCEEEEECCCC
Q ss_conf 88887899999999861047868999708----83-7999998418888699992998-999876665393799936879
Q gi|254780442|r 352 NETGADVISSAARQIAETLRLSAIFCYTA----SG-ATGLRAARERPKLEIIALSPMI-QTARRLALVWGIHCVVTEDAS 425 (480)
Q Consensus 352 ~~~~~~aIa~aav~lA~~l~a~aIiv~T~----sG-~tA~~iS~~RP~~pIiaiT~~~-~t~r~l~L~~GV~p~~~~~~~ 425 (480)
..+..+++ ++......++|++-.. +| ...+.+.+..|..||+.+|-.. .-...-.+-.|+.-++.++.
T Consensus 37 a~~g~eAl-----~~~~~~~~DlvilD~~mP~~dG~el~~~ir~~~~~~piI~lT~~~~~~~~~~a~~~Ga~~yl~KP~- 110 (137)
T 3hdg_A 37 AGDGEEGE-----RLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLFLPKPI- 110 (137)
T ss_dssp ESSHHHHH-----HHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEECCSSC-
T ss_pred ECCHHHHH-----HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCC-
T ss_conf 89999999-----998747998999737899998999999999509899589998989999999999869989997989-
Q ss_pred CHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 9999999999999988887788
Q gi|254780442|r 426 DSDDMVNRACRIVVEQGFGKPG 447 (480)
Q Consensus 426 ~~~~~i~~a~~~l~~~g~i~~G 447 (480)
+.++... +++.+......+.|
T Consensus 111 ~~~~L~~-~i~~~~~~~~~~eG 131 (137)
T 3hdg_A 111 EPGRLME-TLEDFRHIKLAKEG 131 (137)
T ss_dssp CHHHHHH-HHHHHHHHHHHHC-
T ss_pred CHHHHHH-HHHHHHHHHHHHCC
T ss_conf 9999999-99999989998118
No 81
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=55.48 E-value=8.5 Score=16.57 Aligned_cols=49 Identities=16% Similarity=0.079 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHEEEEECCCCC---HHCCHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 5663117888753312475222200---21587673689999999985139839980
Q gi|254780442|r 223 PRAIEYASEIIQLSDAVMVARGDLG---VEMALELIPGIQKKLIRIARQLGKPVVIA 276 (480)
Q Consensus 223 ~~al~nl~eI~~~sDgimiaRGDLg---~e~~~e~vp~~Qk~ii~~~~~~~kpvivA 276 (480)
+-|+..||+++ .|. .+|+|. ..-+.-|--.....+...|.+.|+||...
T Consensus 184 ~tg~~~ld~~~---~G~--~~g~l~vi~a~pg~GKT~~~~~~a~~~a~~~g~~v~~~ 235 (444)
T 2q6t_A 184 RTGFKELDQLI---GTL--GPGSLNIIAARPAMGKTAFALTIAQNAALKEGVGVGIY 235 (444)
T ss_dssp CCSCHHHHHHH---CCC--CTTCEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred ECCCHHHHHHH---CCC--CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 56943568884---687--88848999830466621888878999999779949998
No 82
>1ve5_A Threonine deaminase; riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus HB8} SCOP: c.79.1.1
Probab=55.05 E-value=8.8 Score=16.46 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=22.9
Q ss_pred CCCEEEEECCCHHHH----HHHHHHCCCCCEEEEECCHH
Q ss_conf 786899970883799----99984188886999929989
Q gi|254780442|r 371 RLSAIFCYTASGATG----LRAARERPKLEIIALSPMIQ 405 (480)
Q Consensus 371 ~a~aIiv~T~sG~tA----~~iS~~RP~~pIiaiT~~~~ 405 (480)
..+.+++..-+|-+. .....++|...++++-+...
T Consensus 169 ~~~~v~~~~g~Gg~~~g~~~~~~~~~~~~~iigVe~~~~ 207 (311)
T 1ve5_A 169 FPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAA 207 (311)
T ss_dssp CCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf 731899379853789999876765188745999961565
No 83
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=54.59 E-value=8.9 Score=16.41 Aligned_cols=23 Identities=26% Similarity=0.471 Sum_probs=13.8
Q ss_pred CHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 99999999973997899988888
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSHT 41 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SHg 41 (480)
..+.|+.|.+.|+|.+|+-++.+
T Consensus 33 ~~~di~~~k~~G~N~VRl~~~~~ 55 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDG 55 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCS
T ss_pred HHHHHHHHHHCCCCEEEEECCCC
T ss_conf 99999999976998799746688
No 84
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=54.02 E-value=9.1 Score=16.34 Aligned_cols=189 Identities=15% Similarity=0.094 Sum_probs=103.6
Q ss_pred CCCCHHHHHHH-HHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH--------HEE
Q ss_conf 56765567789-988734885325058557734799999862003433555327856631178887533--------124
Q gi|254780442|r 169 QALTQKDREDL-HAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLS--------DAV 239 (480)
Q Consensus 169 ~~ltekD~~di-~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~s--------Dgi 239 (480)
|..|+.|.+.+ +.|.+ .++--|++ ++..|..+|+.|...++++.+=|-=+.|-..++.-+.++ |.|
T Consensus 69 p~aT~~~I~~lc~eA~~-y~faaVCV----~P~~V~~a~~~L~gs~v~vatVVgFP~G~~~~~~K~~Ea~~Ai~~GAdEI 143 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKE-YGFATVCV----RPDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASEL 143 (288)
T ss_dssp TTCCHHHHHHHHHHHHH-HTCSEEEE----CGGGHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEE
T ss_pred CCCCHHHHHHHHHHHHH-HCCCEEEE----CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 77899999999999987-49919998----99999999998358985178884579997878899999999998499779
Q ss_pred --EEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHH-CCCCEEEECCCCCC
Q ss_conf --752222002158767368999999998513983998057678888288984034778999985-19968998144435
Q gi|254780442|r 240 --MVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVF-EEADAIMLSAETAS 316 (480)
Q Consensus 240 --miaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~-dG~D~imLs~ETa~ 316 (480)
.+..|-|- +=..+++-.--+.+...|...--.||+-|-.| |..|+..+..... -|+|-|= |+.
T Consensus 144 DmVin~~~lk-~g~~~~v~~eI~~v~~~a~~~~lKVILEt~~L---------t~eei~~a~~ia~~aGADFIK----TST 209 (288)
T 3oa3_A 144 DMVMNYPWLS-EKRYTDVFQDIRAVRLAAKDAILKVILETSQL---------TADEIIAGCVLSSLAGADYVK----TST 209 (288)
T ss_dssp EEECCHHHHH-TTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHTTCSEEE----CCC
T ss_pred EEEECHHHHH-CCCHHHHHHHHHHHHHHCCCCEEEEEEECCCC---------CHHHHHHHHHHHHHCCCCEEE----ECC
T ss_conf 9865578870-57699999999999985489738999833769---------989999999999976998798----258
Q ss_pred CCCH----HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHC
Q ss_conf 4465----899999999887630101244444432038788887899999999861047868999708837999998418
Q gi|254780442|r 317 GSYP----VDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGLRAARER 392 (480)
Q Consensus 317 G~yP----~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS~~R 392 (480)
|..| .+.|+.|+++++..... -..+-.....+..+++.. ..++|..|= |.||- .++--+|
T Consensus 210 Gf~~~gAt~edV~lm~~~~~~~~~~------~~IKaSGGIRt~~~a~~~------i~aGa~RIG--tSsg~--~I~~e~~ 273 (288)
T 3oa3_A 210 GFNGPGASIENVSLMSAVCDSLQSE------TRVKASGGIRTIEDCVKM------VRAGAERLG--ASAGV--KIVNETR 273 (288)
T ss_dssp SSSSCCCCHHHHHHHHHHHHHSSSC------CEEEEESSCCSHHHHHHH------HHTTCSEEE--ESCHH--HHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCC------EEEECCCCCCCHHHHHHH------HHHHHHHHC--CCCHH--HHHHHHH
T ss_conf 8689998899999999999984878------258671598999999999------998657606--07489--9999998
No 85
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=53.63 E-value=9.2 Score=16.30 Aligned_cols=153 Identities=19% Similarity=0.140 Sum_probs=70.2
Q ss_pred CEEEEEECCHH--------HHHHHHHHH--HHHHEEEEE-CCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHH
Q ss_conf 33555327856--------631178887--533124752-2220021587673689999999985139839980576788
Q gi|254780442|r 214 IGLMSKIEKPR--------AIEYASEII--QLSDAVMVA-RGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLES 282 (480)
Q Consensus 214 ~~IiaKIE~~~--------al~nl~eI~--~~sDgimia-RGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leS 282 (480)
..|+.|-|+.+ +..|+=.-. +..++++.+ -|+.|.-+ -..|+.+|.|+++-
T Consensus 61 ~~I~~K~E~~nptGSfKdRga~~~i~~a~~~g~~~vv~aSsGN~G~Al------------A~aa~~~Gi~~~Iv------ 122 (372)
T 1p5j_A 61 TSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGCAHFVCSSAGNAGMAA------------AYAARQLGVPATIV------ 122 (372)
T ss_dssp SCEEEECGGGSGGGBTTHHHHHHHHHHHHHTTCCEEEECCSSHHHHHH------------HHHHHHHTCCEEEE------
T ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH------------HHHHHHCCCCCEEE------
T ss_conf 989999646897778399999999999997699879997966999999------------99999829983302------
Q ss_pred HHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCH--HHHHH
Q ss_conf 8828898403477899998519968998144435446589999999988763010124444443203878888--78999
Q gi|254780442|r 283 MVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETG--ADVIS 360 (480)
Q Consensus 283 M~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~--~~aIa 360 (480)
|-.+..|.+.+.. -..|+..+. ++....++.+...+.+.+-....+ ..+..+. .+.-.
T Consensus 123 ~p~~~~~~k~~~l-----~~~Ga~Vi~------~~~~~~~a~~~a~~~a~~~~~~~~---------~~~~~n~~~i~g~~ 182 (372)
T 1p5j_A 123 VPGTTPALTIERL-----KNEGATCKV------VGELLDEAFELAKALAKNNPGWVY---------IPPFDDPLIWEGHA 182 (372)
T ss_dssp ECTTCCHHHHHHH-----HHTTCEEEE------CCSCHHHHHHHHHHHHHHSTTEEE---------CCSSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHH-----HHCCCEEEE------EECCHHHHHHHHHHHHCCCCCEEE---------ECCCCCHHHHHHHC
T ss_conf 7887748886455-----525836877------512125688888876414687698---------12666166676520
Q ss_pred HHHHHHHHCCC--CCEEEEECCCHHHHH----HHH-HHCCCCCEEEEECCH
Q ss_conf 99999861047--868999708837999----998-418888699992998
Q gi|254780442|r 361 SAARQIAETLR--LSAIFCYTASGATGL----RAA-RERPKLEIIALSPMI 404 (480)
Q Consensus 361 ~aav~lA~~l~--a~aIiv~T~sG~tA~----~iS-~~RP~~pIiaiT~~~ 404 (480)
..+.++...++ .+.|++..-+|.+.. .+. ..+|..+|+++.+..
T Consensus 183 t~~~Ei~~ql~~~pd~i~~~~G~Gg~~~Gi~~~~~~~~~~~~~ii~ve~~g 233 (372)
T 1p5j_A 183 SIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFG 233 (372)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred CHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEECEECCC
T ss_conf 218999985337987599997763788999999998528887200000268
No 86
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=53.59 E-value=9.2 Score=16.30 Aligned_cols=82 Identities=13% Similarity=0.096 Sum_probs=51.3
Q ss_pred HHHHCCCCCEEEEEC----CCH-HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCEEEEECCCCC--HHHHHHHHHHH
Q ss_conf 986104786899970----883-79999984188886999929989998766653937999368799--99999999999
Q gi|254780442|r 365 QIAETLRLSAIFCYT----ASG-ATGLRAARERPKLEIIALSPMIQTARRLALVWGIHCVVTEDASD--SDDMVNRACRI 437 (480)
Q Consensus 365 ~lA~~l~a~aIiv~T----~sG-~tA~~iS~~RP~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~~~--~~~~i~~a~~~ 437 (480)
+...+...+.|+.-- .+| ..++.+.+..|..||+.+|.....+.+ .+-.|+.-++.++++. ....++.+...
T Consensus 49 ~~l~~~~~DlvilDi~mP~~dG~el~~~ir~~~~~~~iI~~t~~~e~~~~-a~~~Ga~dyl~KP~~~~~L~~~i~~~~~~ 127 (143)
T 2qv0_A 49 KFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVE-AFELEAFDYILKPYQESRIINMLQKLTTA 127 (143)
T ss_dssp HHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEESCCTTHHH-HHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHH-HHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99986699989987888889989999999954999808999778899999-99859988997999999999999999999
Q ss_pred HHHCCCCCCC
Q ss_conf 9988887788
Q gi|254780442|r 438 VVEQGFGKPG 447 (480)
Q Consensus 438 l~~~g~i~~G 447 (480)
..++.-...|
T Consensus 128 ~~~~~~a~EG 137 (143)
T 2qv0_A 128 WEQQNNAAEG 137 (143)
T ss_dssp HHHC------
T ss_pred HHHHHHHCCC
T ss_conf 9976413127
No 87
>1vli_A Spore coat polysaccharide biosynthesis protein SPSE; 2636322, structural genomics, JCSG, protein structure initiative, BSU37870, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=53.19 E-value=9.4 Score=16.25 Aligned_cols=97 Identities=16% Similarity=0.306 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHH
Q ss_conf 34799999862003433555327856631178887533124752222002158767368999999998513983998057
Q gi|254780442|r 199 ADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQ 278 (480)
Q Consensus 199 ~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq 278 (480)
.++..++.+++.+.++..++=+=..++++-+.++ ..|.+=||-+|+ ...| +|..+...+||+|+.|-
T Consensus 100 ~~~~~~l~~~~k~~~i~~~~s~fd~~s~~~l~~l--~~~~~KIaS~di------~n~~-----Ll~~i~~~~kpiiiStG 166 (385)
T 1vli_A 100 AEWILPLLDYCREKQVIFLSTVCDEGSADLLQST--SPSAFKIASYEI------NHLP-----LLKYVARLNRPMIFSTA 166 (385)
T ss_dssp GGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTT--CCSCEEECGGGT------TCHH-----HHHHHHTTCSCEEEECT
T ss_pred HHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH--CCCEEEECCCCC------CCHH-----HHHHHHHHCCCEEEECC
T ss_conf 8999999999998498799853727888788760--963167526554------6579-----99999970997799326
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHC-CC-C-EEEECCCCCCCCCHH
Q ss_conf 6788882889840347789999851-99-6-899814443544658
Q gi|254780442|r 279 MLESMVTSPFPTRAEVSDVATAVFE-EA-D-AIMLSAETASGSYPV 321 (480)
Q Consensus 279 ~leSM~~~p~PTRaEv~Dvanav~d-G~-D-~imLs~ETa~G~yP~ 321 (480)
|. |-.|+....+.+.. +. + ++|-. +-.||.
T Consensus 167 ~~---------~~~eI~~~~~~i~~~~~~~i~llhC----~s~YPt 199 (385)
T 1vli_A 167 GA---------EISDVHEAWRTIRAEGNNQIAIMHC----VAKYPA 199 (385)
T ss_dssp TC---------CHHHHHHHHHHHHTTTCCCEEEEEE----CSSSSC
T ss_pred CC---------CHHHHHHHHHHHHHCCCCCEEEEEC----CCCCCC
T ss_conf 54---------4346899999998647876799854----788999
No 88
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus HB27} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=52.70 E-value=9.5 Score=16.20 Aligned_cols=22 Identities=32% Similarity=0.597 Sum_probs=13.4
Q ss_pred EEEEEEECCCCC-CCCCEEEEEE
Q ss_conf 999852227888-8641599999
Q gi|254780442|r 450 IIISAGLPLGTP-GSTNMLRIAY 471 (480)
Q Consensus 450 VVvv~G~p~~~~-G~TN~irv~~ 471 (480)
|+++-|..++.. +..+.+|+-.
T Consensus 349 V~v~pG~~F~~~~~~~~~iRls~ 371 (397)
T 2zyj_A 349 VAFVPGGPFFANGGGENTLRLSY 371 (397)
T ss_dssp EEEEESGGGCTTSCCTTEEEEEC
T ss_pred EEEEECHHHCCCCCCCCEEEEEE
T ss_conf 69994466378999899899995
No 89
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 2.71A {Bacillus subtilis subsp}
Probab=52.64 E-value=9.6 Score=16.19 Aligned_cols=196 Identities=13% Similarity=0.144 Sum_probs=100.9
Q ss_pred CCHHHHHHHHHHHHCCCCCEECCC-CCCCC-----HHHHH-HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEEC
Q ss_conf 765567789988734885325058-55773-----47999-998620034335553278566311788875331247522
Q gi|254780442|r 171 LTQKDREDLHAALQTCEVDWVALS-FIQSA-----DDLLE-IRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVAR 243 (480)
Q Consensus 171 ltekD~~di~~a~~~~~vD~ialS-fVr~~-----~di~~-~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaR 243 (480)
+|..|+..|--++.+.+||.|=+. |+... .|... .+.........+........+++...+.-...-.+++.-
T Consensus 25 ~s~~~k~~i~~~L~~~Gv~~IEvG~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 104 (307)
T 1ydo_A 25 IATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAALVPNQRGLENALEGGINEACVFMSA 104 (307)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEEECCSHHHHHHHHHHTCSEEEEEEES
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEE
T ss_conf 89999999999999819998995787584417778889999963463556345420146778999983799858898764
Q ss_pred CCCCHH----CCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHH---HHHHHH-HHHCCCCEEEECCCCC
Q ss_conf 220021----58767368999999998513983998057678888288984034---778999-9851996899814443
Q gi|254780442|r 244 GDLGVE----MALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAE---VSDVAT-AVFEEADAIMLSAETA 315 (480)
Q Consensus 244 GDLg~e----~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaE---v~Dvan-av~dG~D~imLs~ETa 315 (480)
.+.-.. ...+..-...+..+..++..+..+-.. ++.+...+..++.. +-+++. +..-|+|.|.|. .|+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~i~l~-Dt~ 180 (307)
T 1ydo_A 105 SETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAY---LSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG-DTI 180 (307)
T ss_dssp SHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEE---EECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE-CSS
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEE---EEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC-CCC
T ss_conf 3777767411359999876799999998538536654---422267655665316579999999997298067604-756
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCH
Q ss_conf 544658999999998876301-0124444443203878888789999999986104786899970883
Q gi|254780442|r 316 SGSYPVDAVRTMSLVASSAER-DSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASG 382 (480)
Q Consensus 316 ~G~yP~~~v~~~~~i~~~~E~-~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG 382 (480)
=...|.++-+.+..+.+..-. ...++ ...+. -+|.+....|-..+|+. |=-|-.|
T Consensus 181 G~~~P~~v~~~v~~~~~~~~~~~i~~H---------~Hn~~--Gla~an~laAi~aG~~~-id~tl~G 236 (307)
T 1ydo_A 181 GAANPAQVETVLEALLARFPANQIALH---------FHDTR--GTALANMVTALQMGITV-FDGSAGG 236 (307)
T ss_dssp CCCCHHHHHHHHHHHHTTSCGGGEEEE---------CBGGG--SCHHHHHHHHHHHTCCE-EEEBGGG
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCEE---------ECCCC--CHHHHHHHHHHHHCCCE-EEECCCC
T ss_conf 677879999999999984668645055---------45883--56999999999919999-9966747
No 90
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=52.10 E-value=9.7 Score=16.13 Aligned_cols=52 Identities=10% Similarity=0.252 Sum_probs=31.0
Q ss_pred CHHHHHHHHHCCCCEEEEECCCCCH--HHHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 9999999997399789998888898--99999999999999974992799998789
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSHTSH--DKMCELIKKIRAVELRSRRPIGILIDLQG 72 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SHg~~--e~~~~~i~~ir~~~~~~~~~i~Il~Dl~G 72 (480)
..+.++.|.+.|+|++|+-++.+.. +...+.++.+=+++.+.|. -+++|+.+
T Consensus 41 ~~~~i~~i~~~G~N~VRl~~~~~~~~~~~~l~~ld~vi~~a~~~Gl--~VIlD~H~ 94 (464)
T 1wky_A 41 ATTAIEGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLAEDNNL--VAVLEVHD 94 (464)
T ss_dssp HHHHHHHHHTTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTC--EEEEEECT
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC--EEEEECCC
T ss_conf 7999999997699689997678886577089999999999998799--99996377
No 91
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis, hydrolase; 1.91A {Thermoanaerobacter tengcongensis MB4}
Probab=52.08 E-value=9.7 Score=16.13 Aligned_cols=104 Identities=17% Similarity=0.171 Sum_probs=58.2
Q ss_pred EECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHC
Q ss_conf 25058557734799999862003433555327856631178887533124752222002158767368999999998513
Q gi|254780442|r 190 WVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQL 269 (480)
Q Consensus 190 ~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~ 269 (480)
.+.-|| +.+.+..+++........+...- .+....++....+..-+. ..... ....+++.+++.
T Consensus 147 vi~~sf--~~~~l~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~i~-------~~~~~---~~~~~i~~~~~~ 210 (252)
T 2pz0_A 147 VIISSF--NHYSLRDVKKMAPHLKIGLLYQC----GLVEPWHMALRMEAYSLH-------PFYFN---IIPELVEGCKKN 210 (252)
T ss_dssp EEEEES--BHHHHHHHHHHCTTSEEEEEECS----BCSSTHHHHHHTTCSEEE-------EBGGG---CCHHHHHHHHHT
T ss_pred EEEEEC--CHHHHHHHHHHCCCCEEEEEECC----CCCCHHHHHHCCCCCEEC-------CCHHC---CCHHHHHHHHHC
T ss_conf 899958--98999999985888528998415----666535554303541213-------20300---469999999987
Q ss_pred CCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 983998057678888288984034778999985199689981444354465899999999
Q gi|254780442|r 270 GKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSL 329 (480)
Q Consensus 270 ~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~ 329 (480)
|++|++-| ++ +-.++..+...|+|+|+= .||....+.+++
T Consensus 211 g~~v~~wT------vn-------~~~~~~~l~~~GvdgI~T-------D~P~~l~~~l~~ 250 (252)
T 2pz0_A 211 GVKLFPWT------VD-------RKEDMERMIKAGVDGIIT-------DDPETLINLVRK 250 (252)
T ss_dssp TCEECCBC------CC-------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHC-
T ss_pred CCEEEEEE------CC-------CHHHHHHHHHCCCCEEEE-------CCHHHHHHHHHH
T ss_conf 99999980------89-------999999999859999997-------949999999985
No 92
>3c85_A Putative glutathione-regulated potassium-efflux system protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=51.42 E-value=10 Score=16.06 Aligned_cols=67 Identities=10% Similarity=0.152 Sum_probs=43.6
Q ss_pred CCCEEEEECCCHHHHH----HHHHHCCCCCEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 7868999708837999----9984188886999929989998766653937999368799999999999999
Q gi|254780442|r 371 RLSAIFCYTASGATGL----RAARERPKLEIIALSPMIQTARRLALVWGIHCVVTEDASDSDDMVNRACRIV 438 (480)
Q Consensus 371 ~a~aIiv~T~sG~tA~----~iS~~RP~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l 438 (480)
.|+++|+.+.+-.+.. .+-++.|.++|++.+.+......|.-. |+.-++.+...-...+.+.+++.+
T Consensus 105 ~a~~vi~~~~~~~~n~~~~~~~r~~~~~~~Iiara~~~~~~~~L~~~-Gad~Vv~p~~~~g~~la~~~l~~l 175 (183)
T 3c85_A 105 HVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAIAEYPDQLEGLLES-GVDAAFNIYSEAGSGFARHVCKQL 175 (183)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHH-TCSEEEEHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHC-CCCEEECHHHHHHHHHHHHHHHHH
T ss_conf 67499981684079999999999878994799997799999999986-999999859999999999999860
No 93
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=50.70 E-value=10 Score=15.98 Aligned_cols=53 Identities=11% Similarity=0.015 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 8999999998513983998057678888288984034778999985199689981444354465899999999
Q gi|254780442|r 257 GIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSL 329 (480)
Q Consensus 257 ~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~ 329 (480)
.+.+.+++.|++.|++|++-| ++ +..++..++..|+|+|+ -.||..+++.+..
T Consensus 191 ~~~~~~v~~~~~~g~~v~~wT------vn-------~~~~~~~~~~~GvdgIi-------TD~P~~a~~~~~~ 243 (250)
T 3ks6_A 191 TADAGLMAQVQAAGLDFGCWA------AH-------TPSQITKALDLGVKVFT-------TDRPTLAIALRTE 243 (250)
T ss_dssp GCCHHHHHHHHHTTCEEEEEC------CC-------SHHHHHHHHHHTCSEEE-------ESCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCEEEEEC------CC-------CHHHHHHHHHCCCCEEE-------ECCHHHHHHHHHH
T ss_conf 279999999998699999988------99-------59999999976999999-------8969999999997
No 94
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=50.55 E-value=10 Score=15.96 Aligned_cols=114 Identities=14% Similarity=0.205 Sum_probs=71.0
Q ss_pred HHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCH-H
Q ss_conf 677899887348853250585577347999998620034335553278566311788875331247522220021587-6
Q gi|254780442|r 175 DREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMAL-E 253 (480)
Q Consensus 175 D~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~-e 253 (480)
..+.++.+++. ++.++..+|-...+-++.++ +.+++++..+-+....+-..+ ...|++.+--.+=|=+.+. .
T Consensus 91 ~~~~~~~~~~~-~~~~i~~~~g~p~~~i~~~~----~~gi~v~~~v~s~~~A~~a~~--~g~D~lV~qG~eAGGH~~~~~ 163 (326)
T 3bo9_A 91 ADDLVKVCIEE-KVPVVTFGAGNPTKYIRELK----ENGTKVIPVVASDSLARMVER--AGADAVIAEGMESGGHIGEVT 163 (326)
T ss_dssp HHHHHHHHHHT-TCSEEEEESSCCHHHHHHHH----HTTCEEEEEESSHHHHHHHHH--TTCSCEEEECTTSSEECCSSC
T ss_pred HHHHHHHHHHC-CCCEEEECCCCCHHHHHHHH----HCCCEEEEECCCHHHHHHHHH--CCCCEEEEECCCCCCCCCCCC
T ss_conf 58999999846-95999988999099999997----469889995599999999987--289889963687667888775
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 7368999999998513983998057678888288984034778999985199689981
Q gi|254780442|r 254 LIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 254 ~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
-+.++ -........|||.|.=+-+. .+++-|..-|+|++++.
T Consensus 164 ~~~l~----~~~~~~~~iPviaAGGI~dg------------~~~aaalalGA~gv~~G 205 (326)
T 3bo9_A 164 TFVLV----NKVSRSVNIPVIAAGGIADG------------RGMAAAFALGAEAVQMG 205 (326)
T ss_dssp HHHHH----HHHHHHCSSCEEEESSCCSH------------HHHHHHHHHTCSEEEES
T ss_pred HHHHH----HHHHHHCCCCEEEECCCCCH------------HHHHHHHHCCCCCCCCC
T ss_conf 57776----66776425666986576788------------99999995597624157
No 95
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=50.37 E-value=10 Score=15.94 Aligned_cols=23 Identities=26% Similarity=0.471 Sum_probs=14.9
Q ss_pred CHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 99999999973997899988888
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSHT 41 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SHg 41 (480)
..+.+..|.+.|+|++||-|+.+
T Consensus 56 ~~~~i~~ia~~G~N~VRlp~~~~ 78 (345)
T 3jug_A 56 ASTAIPAIAEQGANTIRIVLSDG 78 (345)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCS
T ss_pred HHHHHHHHHHCCCCEEEEECCCC
T ss_conf 79999999983997799956688
No 96
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=50.35 E-value=10 Score=15.94 Aligned_cols=71 Identities=14% Similarity=0.120 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHEEEEE---CCCCCHHCCHHHHHHHHHHHHHHHHHC-CCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 31178887533124752---222002158767368999999998513-98399805767888828898403477899998
Q gi|254780442|r 226 IEYASEIIQLSDAVMVA---RGDLGVEMALELIPGIQKKLIRIARQL-GKPVVIATQMLESMVTSPFPTRAEVSDVATAV 301 (480)
Q Consensus 226 l~nl~eI~~~sDgimia---RGDLg~e~~~e~vp~~Qk~ii~~~~~~-~kpvivATq~leSM~~~p~PTRaEv~Dvanav 301 (480)
.+.+..|.+.|.|.+-. .|-=|..-. ++.--+..|++.+++ .+|+.+-.-+ -|+ .|++.++
T Consensus 160 ~~ri~~i~~~s~gFiY~vs~~GvTG~~~~---~~~~~~~~i~~ik~~t~~Pv~vGFGI---------~~~---e~v~~~~ 224 (268)
T 1qop_A 160 DDLLRQVASYGRGYTYLLSRSGVTGAENR---GALPLHHLIEKLKEYHAAPALQGFGI---------SSP---EQVSAAV 224 (268)
T ss_dssp HHHHHHHHHHCCSCEEEESSSSCCCSSSC---C--CCHHHHHHHHHTTCCCEEEESSC---------CSH---HHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCC---CCHHHHHHHHHHHHCCCCCCEEEECC---------CCH---HHHHHHH
T ss_conf 78899987259864787103467876543---10568999999975468883576156---------999---9999998
Q ss_pred HCCCCEEEEC
Q ss_conf 5199689981
Q gi|254780442|r 302 FEEADAIMLS 311 (480)
Q Consensus 302 ~dG~D~imLs 311 (480)
..|+||+...
T Consensus 225 ~~~ADGvVVG 234 (268)
T 1qop_A 225 RAGAAGAISG 234 (268)
T ss_dssp HTTCSEEEEC
T ss_pred HCCCCEEEEC
T ss_conf 6389989988
No 97
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=50.24 E-value=10 Score=15.93 Aligned_cols=13 Identities=31% Similarity=0.439 Sum_probs=6.1
Q ss_pred HCCCEEEEEHHHH
Q ss_conf 1398399805767
Q gi|254780442|r 268 QLGKPVVIATQML 280 (480)
Q Consensus 268 ~~~kpvivATq~l 280 (480)
..|||||.+.|.+
T Consensus 231 ~lG~PVisSNqa~ 243 (273)
T 2xed_A 231 EFGIPVLSAATAG 243 (273)
T ss_dssp HHSSCEEEHHHHH
T ss_pred HHCCCEEEEHHHH
T ss_conf 8799989608999
No 98
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=50.18 E-value=10 Score=15.92 Aligned_cols=88 Identities=14% Similarity=0.231 Sum_probs=51.1
Q ss_pred EECCCCEEEEECC--CCCCCC---CCCCCCCCCCHH--HCCCCCEEEEE--CCCEEECCCCCCCCEEEEEECCCCEEECC
Q ss_conf 9658999999532--455644---422126644222--11336526740--68422102344541124551388087114
Q gi|254780442|r 86 DLTEGQIFTLDNK--DSLGSS---DRVMLPHPEIFA--SIKIGDRLLID--DGRVKLCVQEKGIGFIKCKVIAGISIADR 156 (480)
Q Consensus 86 ~l~~G~~v~l~~~--~~~~~~---~~i~i~y~~l~~--~ik~Gd~I~id--DG~i~l~V~~~~~~~i~c~V~~gG~l~s~ 156 (480)
-++.|+++.|+.. +.+|.. ....++-..|.. .+++|..+..+ +|.+.++|+++.++.++.-- +-.| ..
T Consensus 51 Gm~~Ge~~~v~l~peeAyGe~d~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~g~~~~~V~~v~~~~V~vD~--NHPL-AG 127 (196)
T 2kfw_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDG--NHML-AG 127 (196)
T ss_dssp SSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSEEECC--CCTT-SC
T ss_pred CCCCCCCEEEEECHHHCCCCCCHHHEEEECHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCEEEEEC--CCCC-CC
T ss_conf 56489616999776890688887996872255535444667750899745788488999997699899968--8757-79
Q ss_pred CCCCCCCCCCCCCCCCHHHH
Q ss_conf 56446785445556765567
Q gi|254780442|r 157 KGISFPDTFLTTQALTQKDR 176 (480)
Q Consensus 157 Kgvnip~~~i~l~~ltekD~ 176 (480)
|.++|--..+.+-.-|+..+
T Consensus 128 k~L~F~veV~~VreAt~EEi 147 (196)
T 2kfw_A 128 QNLKFNVEVVAIREATEEEL 147 (196)
T ss_dssp CCCEEEEEECCCBCCCHHHH
T ss_pred CEEEEEEEEEEEECCCHHHH
T ss_conf 87899999999866999999
No 99
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=49.87 E-value=10 Score=15.89 Aligned_cols=46 Identities=17% Similarity=0.270 Sum_probs=17.4
Q ss_pred ECCCCCCCCHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHHHEEEE
Q ss_conf 50585577347999998620034-3355532785663117888753312475
Q gi|254780442|r 191 VALSFIQSADDLLEIRKIISQNK-IGLMSKIEKPRAIEYASEIIQLSDAVMV 241 (480)
Q Consensus 191 ialSfVr~~~di~~~r~~l~~~~-~~IiaKIE~~~al~nl~eI~~~sDgimi 241 (480)
|++|---+..|+.++=+..++.+ ...++=..++++ .+.+.+|..+.
T Consensus 104 I~iSqSG~S~eti~al~~ak~~g~~~ti~iTn~~~S-----~La~~ad~~i~ 150 (368)
T 1moq_A 104 ITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGS-----SLVRESDLALM 150 (368)
T ss_dssp EEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTC-----HHHHHSSEEEE
T ss_pred EEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCC-----HHHHHCCEEEE
T ss_conf 997889997999999999997599818999899999-----88996591265
No 100
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis}
Probab=49.54 E-value=11 Score=15.85 Aligned_cols=103 Identities=13% Similarity=0.135 Sum_probs=58.5
Q ss_pred EECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHC
Q ss_conf 25058557734799999862003433555327856631178887533124752222002158767368999999998513
Q gi|254780442|r 190 WVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQL 269 (480)
Q Consensus 190 ~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~ 269 (480)
.+..|| +.+-+..+|++..+-.+..+..--.+ ..+.++ ...++ .+.. ......+..++.|++.
T Consensus 133 v~~~Sf--~~~~l~~l~~~~p~~~~~~l~~~~~~---~~~~~~--~~~~~---------~~~~-~~~~~~~~~v~~~~~~ 195 (238)
T 3no3_A 133 TDYISF--NMDACKEFIRLCPKSEVSYLNGELSP---MELKEL--GFTGL---------DYHY-KVLQSHPDWVKDCKVL 195 (238)
T ss_dssp EEEEES--CHHHHHHHHHHCTTSCEEECSSCSCH---HHHHHT--TCCEE---------EEEH-HHHHHSTTHHHHHHHT
T ss_pred EEEEEC--CHHHHHHHHHHCCCCEEEEECCCCCH---HHHHHC--CCCCC---------CCHH-HHHHCCHHHHHHHHHC
T ss_conf 089748--89999999987899639997275786---777542--65401---------3015-5532369999999986
Q ss_pred CCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 983998057678888288984034778999985199689981444354465899999999
Q gi|254780442|r 270 GKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSL 329 (480)
Q Consensus 270 ~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~ 329 (480)
|.+|++-| ++ +-.++..++.-|+|+|+- .||....+.+++
T Consensus 196 g~~v~~wT------vn-------~~~~~~~l~~~GVdgI~T-------D~P~~~~~~l~~ 235 (238)
T 3no3_A 196 GMTSNVWT------VD-------DPKLMEEMIDMGVDFITT-------DLPEETQKILHS 235 (238)
T ss_dssp TCEEEEEC------CC-------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred CCEEEEEC------CC-------CHHHHHHHHHCCCCEEEE-------CCHHHHHHHHHH
T ss_conf 99899977------79-------999999999769499998-------969999999997
No 101
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes str}
Probab=49.39 E-value=10 Score=16.05 Aligned_cols=23 Identities=17% Similarity=0.213 Sum_probs=13.2
Q ss_pred CEEEEECCHHHHHHHHHHCCCEE
Q ss_conf 69999299899987666539379
Q gi|254780442|r 396 EIIALSPMIQTARRLALVWGIHC 418 (480)
Q Consensus 396 pIiaiT~~~~t~r~l~L~~GV~p 418 (480)
|++.+.|-...+-++++.+|..|
T Consensus 329 p~l~vip~QllAy~~A~~rG~d~ 351 (373)
T 2aml_A 329 PFLMILPFQILAHHIAELKGNKL 351 (373)
T ss_dssp HHHHTHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999809999
No 102
>2zum_A 458AA long hypothetical endo-1,4-beta-glucanase; TIM barrel, hydrolase; 1.95A {Pyrococcus horikoshii} PDB: 2zun_A*
Probab=48.84 E-value=11 Score=15.78 Aligned_cols=20 Identities=20% Similarity=0.468 Sum_probs=11.6
Q ss_pred HHHHHHHHHCCCCEEEEECC
Q ss_conf 99999999739978999888
Q gi|254780442|r 20 EDVINRLHEEGTDVFRINMS 39 (480)
Q Consensus 20 ~e~i~~l~~aG~nv~RiN~S 39 (480)
++.++.|.+.|.|++||-++
T Consensus 87 ~~~i~~i~~~GfN~VRlPi~ 106 (458)
T 2zum_A 87 EDMLLQIKSLGFNAIRLPFC 106 (458)
T ss_dssp HHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHCCCCEEECCCC
T ss_conf 99999999869998986507
No 103
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=48.52 E-value=11 Score=15.75 Aligned_cols=129 Identities=12% Similarity=0.123 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHCCCCCEECCCC--CCCCHHHHHHHHHHHCCCCE--EEE-E-----------------ECCHHHHHHHHH
Q ss_conf 5677899887348853250585--57734799999862003433--555-3-----------------278566311788
Q gi|254780442|r 174 KDREDLHAALQTCEVDWVALSF--IQSADDLLEIRKIISQNKIG--LMS-K-----------------IEKPRAIEYASE 231 (480)
Q Consensus 174 kD~~di~~a~~~~~vD~ialSf--Vr~~~di~~~r~~l~~~~~~--Iia-K-----------------IE~~~al~nl~e 231 (480)
++.++++.+++. ++|.|.++- +++++.++++-+..+...+- +-. + +.-.+.++.+.+
T Consensus 84 r~~e~~~~~l~~-Ga~kVvigs~~~~~~~~l~~~~~~~G~~~iv~~id~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 162 (253)
T 1thf_D 84 HDFETASELILR-GADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK 162 (253)
T ss_dssp CSHHHHHHHHHT-TCSEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred EECCCHHHHHHC-CCCEEEECHHHHHCHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHH
T ss_conf 522217889874-9999998847862979999999984984469987787227834555411441378769999999886
Q ss_pred HHHHHHEEEE---ECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf 8753312475---2222002158767368999999998513983998057678888288984034778999985199689
Q gi|254780442|r 232 IIQLSDAVMV---ARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAI 308 (480)
Q Consensus 232 I~~~sDgimi---aRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~i 308 (480)
. ...++++ +|---..-..++-+ + ..++....|+|.+.-+-. ..|+..+...|++++
T Consensus 163 ~--g~~eiiltdI~~dGt~~G~d~~~l----~---~i~~~~~~pii~~GGv~s------------~~dl~~l~~~g~~gv 221 (253)
T 1thf_D 163 R--GAGEILLTSIDRDGTKSGYDTEMI----R---FVRPLTTLPIIASGGAGK------------MEHFLEAFLAGADAA 221 (253)
T ss_dssp T--TCSEEEEEETTTTTSCSCCCHHHH----H---HHGGGCCSCEEEESCCCS------------HHHHHHHHHTTCSEE
T ss_pred C--CCCEEEEEEECCCCCCCCCCHHHH----H---HHHHCCCCCEEEECCCCC------------HHHHHHHHHCCCCEE
T ss_conf 3--799799997524576577540133----4---555247987898469899------------999999997899899
Q ss_pred EECCCCCCCCCHHHHH
Q ss_conf 9814443544658999
Q gi|254780442|r 309 MLSAETASGSYPVDAV 324 (480)
Q Consensus 309 mLs~ETa~G~yP~~~v 324 (480)
+.+.==..|+++.+-+
T Consensus 222 ivgsal~~~~~~~~~l 237 (253)
T 1thf_D 222 LAASVFHFREIDVREL 237 (253)
T ss_dssp EESHHHHTTCSCHHHH
T ss_pred EEEHHHHCCCCCHHHH
T ss_conf 9804877699999999
No 104
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=48.07 E-value=11 Score=15.70 Aligned_cols=206 Identities=17% Similarity=0.215 Sum_probs=109.7
Q ss_pred CCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCEEECCCCE
Q ss_conf 18775799999999973997899988888989999999999999997499279999878986788654898189658999
Q gi|254780442|r 13 LGPSSFSEDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELRSRRPIGILIDLQGPKFRVGKFANSKVDLTEGQI 92 (480)
Q Consensus 13 lGPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkiR~g~~~~~~i~l~~G~~ 92 (480)
+++...+++....+.++|.=.| |-....+.|+..+.++.+|+ .+++|.++-+.++-|.....
T Consensus 18 M~~~vs~~~La~Avs~aGglG~-i~~~~~~~e~l~~~i~~i~~---~~~~Pfgvnl~~~~~~~~~~-------------- 79 (369)
T 3bw2_A 18 MAGGVSVPQLAAAVCEAGGLGF-LAAGYKTADGMYQEIKRLRG---LTGRPFGVNVFMPQPELAES-------------- 79 (369)
T ss_dssp CTTTTSCHHHHHHHHHTTSBEE-EECTTSCHHHHHHHHHHHHH---HCCSCEEEEEECCCCCC-----------------
T ss_pred CCCCCCCHHHHHHHHHCCCEEE-ECCCCCCHHHHHHHHHHHHH---HHCCCCEEEECCCCCCCCHH--------------
T ss_conf 8688786999999996898104-08888999999999999998---44898566532678542215--------------
Q ss_pred EEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 99953245564442212664422211336526740684221023445411245513880871145644678544555676
Q gi|254780442|r 93 FTLDNKDSLGSSDRVMLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKVIAGISIADRKGISFPDTFLTTQALT 172 (480)
Q Consensus 93 v~l~~~~~~~~~~~i~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvnip~~~i~l~~lt 172 (480)
..+.. ....+..... .+ ...++... ...-
T Consensus 80 ------------~~~~~----~~~~~~~~~~--------~~------------------------~~~~~~~~---~~~~ 108 (369)
T 3bw2_A 80 ------------GAVEV----YAHQLAGEAA--------WY------------------------ETELGDPD---GGRD 108 (369)
T ss_dssp ------------CHHHH----HHHHTHHHHH--------HT------------------------TCCCCCSC---SCSS
T ss_pred ------------HHHHH----HHHHHHHHHH--------HH------------------------CCCCCCCC---CCCC
T ss_conf ------------79999----9986532344--------43------------------------01346775---4430
Q ss_pred HHHHHHHHHHHHCCCCCEECCCCCCCC-HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEE----CCCCC
Q ss_conf 556778998873488532505855773-4799999862003433555327856631178887533124752----22200
Q gi|254780442|r 173 QKDREDLHAALQTCEVDWVALSFIQSA-DDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVA----RGDLG 247 (480)
Q Consensus 173 ekD~~di~~a~~~~~vD~ialSfVr~~-~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimia----RGDLg 247 (480)
+...+.+...++. .+..+..+|-.-. +.+..+|+ .++++++.+-+.+..+...+ ...|++.+. -|..|
T Consensus 109 ~~~~~~~~~~~~~-~v~~i~~~~G~p~~~~i~~lk~----~g~~v~~~v~s~~~a~~a~~--~g~D~iv~qG~eAGGH~g 181 (369)
T 3bw2_A 109 DGYDAKLAVLLDD-PVPVVSFHFGVPDREVIARLRR----AGTLTLVTATTPEEARAVEA--AGADAVIAQGVEAGGHQG 181 (369)
T ss_dssp TTHHHHHHHHHHS-CCSEEEEESSCCCHHHHHHHHH----TTCEEEEEESSHHHHHHHHH--TTCSEEEEECTTCSEECC
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHH----CCCEEEEECCCHHHHHHHHH--HCCCEEEEECCCCCCCCC
T ss_conf 5589999887534-9877997078981899999997----69559850588999999998--189844410555677888
Q ss_pred HHCC--------HHHHHHHHHHHHHH-HHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 2158--------76736899999999-8513983998057678888288984034778999985199689981
Q gi|254780442|r 248 VEMA--------LELIPGIQKKLIRI-ARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 248 ~e~~--------~e~vp~~Qk~ii~~-~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
.... +.-+.. +.. ......|||.|.-+-++ .|++-|+--|+||||+.
T Consensus 182 ~~~~~~~~~~~~~~~~~l-----~~~v~~~~~iPviaAGGI~~g------------~~iaaaLalGAdgV~~G 237 (369)
T 3bw2_A 182 THRDSSEDDGAGIGLLSL-----LAQVREAVDIPVVAAGGIMRG------------GQIAAVLAAGADAAQLG 237 (369)
T ss_dssp CSSCCGGGTTCCCCHHHH-----HHHHHHHCSSCEEEESSCCSH------------HHHHHHHHTTCSEEEES
T ss_pred CCCCCCCCCCCCCCHHHH-----HHHHHHHCCCCEEEECCCCCH------------HHHHHHHHCCCCEEEEC
T ss_conf 776644344444108889-----999997569978962477799------------99999995397879986
No 105
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, symmetric dimer, signaling protein; NMR {Helicobacter pylori J99}
Probab=47.69 E-value=11 Score=15.66 Aligned_cols=32 Identities=13% Similarity=0.129 Sum_probs=22.8
Q ss_pred HCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 13983998057678888288984034778999985199689981
Q gi|254780442|r 268 QLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 268 ~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
...-|+|+.|.. .+..|...+..-|||..+.-
T Consensus 66 ~~~~pIi~lt~~------------~~~~~~~~~l~~Gaddyl~K 97 (223)
T 2hqr_A 66 HSSIVVLVSSDN------------PTSEEEVHAFEQGADDYIAK 97 (223)
T ss_dssp CTTSEEEEEESS------------CCHHHHHHHHHHTCSEEEET
T ss_pred CCCCEEEEECCC------------CCHHHHHHHHHCCCCCEEEC
T ss_conf 898329982366------------75899999875399707872
No 106
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=47.41 E-value=11 Score=15.63 Aligned_cols=50 Identities=14% Similarity=0.236 Sum_probs=37.6
Q ss_pred CCCCC-----CEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 77775-----26999418775799999999973997899988888989999999999999997
Q gi|254780442|r 2 VNLRR-----IKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELR 59 (480)
Q Consensus 2 ~~mrk-----tKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~ 59 (480)
|+||| -++.-|=||+.-.+++++.|... -++|-+.+ ..+.++.+|+.-++
T Consensus 1 ~~~~~~~~~p~~~lf~PGP~~~~~~V~~am~~~-------~~~hr~~e-f~~~~~~~r~~l~~ 55 (416)
T 3isl_A 1 MSGRRELCTPLRTIMTPGPVEVDPRVLRVMSTP-------VVGQFDPA-FTGIMNETMEMLRE 55 (416)
T ss_dssp ----CCCCCCCCEECSSSSCCCCHHHHHHTTSC-------CCCTTSHH-HHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC-------CCCCCCHH-HHHHHHHHHHHHHH
T ss_conf 998888999865543389948879999974767-------78877799-99999999999999
No 107
>2yuj_A Ubiquitin fusion degradation 1-like; ubiquitin-dependent proteolytic, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.21 E-value=11 Score=15.60 Aligned_cols=65 Identities=17% Similarity=0.180 Sum_probs=33.5
Q ss_pred EEECCCCEEEEECCCC----CCCCCCCCCCCCCCHHHCCCCCEEEEE--CCCEEECCCCCCCCEEEEEECC
Q ss_conf 8965899999953245----564442212664422211336526740--6842210234454112455138
Q gi|254780442|r 85 VDLTEGQIFTLDNKDS----LGSSDRVMLPHPEIFASIKIGDRLLID--DGRVKLCVQEKGIGFIKCKVIA 149 (480)
Q Consensus 85 i~l~~G~~v~l~~~~~----~~~~~~i~i~y~~l~~~ik~Gd~I~id--DG~i~l~V~~~~~~~i~c~V~~ 149 (480)
+.|.+|..++|...+. ..+.+.+.=++-.-+..+..||.|.+. +..+.|.|.+.++....|.+..
T Consensus 112 ~~lpkgt~VkL~P~~~~f~~i~n~kavLE~~Lrny~~LT~GD~I~I~~~~~~y~f~V~e~kP~~~V~IidT 182 (190)
T 2yuj_A 112 VNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIEC 182 (190)
T ss_dssp ECCCCCSEEEEEESSHHHHHSSCHHHHHHHHHTTCCEECTTCEEEEESSSCEEEEEEEEESSSSSEECSSC
T ss_pred EECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCEEEEEECCEEEEEEEEEECCCCCEEEEEC
T ss_conf 75487888999877886346666699999997188543529999998799999999999858996089848
No 108
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, alternative splicing, cell adhesion, disease mutation, glycoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=46.57 E-value=12 Score=15.54 Aligned_cols=52 Identities=12% Similarity=0.001 Sum_probs=37.0
Q ss_pred CCCEEEEECCH-HHHHHHHHHCC--CEEEEECCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 88699992998-99987666539--379993687999999999999999888877
Q gi|254780442|r 394 KLEIIALSPMI-QTARRLALVWG--IHCVVTEDASDSDDMVNRACRIVVEQGFGK 445 (480)
Q Consensus 394 ~~pIiaiT~~~-~t~r~l~L~~G--V~p~~~~~~~~~~~~i~~a~~~l~~~g~i~ 445 (480)
-.||||+|.+. .+++.|+-+++ ....+..+..+.-+++..|-+.+..+-.++
T Consensus 304 i~~ifavt~~~~~~y~~l~~~~~~~~~~~l~~dssnv~~li~~~y~~~~s~v~~~ 358 (690)
T 3fcs_B 304 INLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELE 358 (690)
T ss_dssp CEEEEEEEGGGHHHHHHHHHHSTTCEEEEECTTCTTHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCEEEEE
T ss_conf 6799997665400689999754875268705786159999999998752646741
No 109
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=46.53 E-value=12 Score=15.53 Aligned_cols=52 Identities=13% Similarity=0.237 Sum_probs=29.5
Q ss_pred CHHHHHHHHHCCCCEEEEECCCC-------C---HHHHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 99999999973997899988888-------9---899999999999999974992799998789
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSHT-------S---HDKMCELIKKIRAVELRSRRPIGILIDLQG 72 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SHg-------~---~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~G 72 (480)
+++-++.|.++|+|..||-+.+- + .+...+.++.+=+.+.+.| +.|++|+-|
T Consensus 75 te~D~~~i~~~G~N~VRiPi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~g--l~VilDlH~ 136 (408)
T 1h4p_A 75 QEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNS--LKVWVDLHG 136 (408)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTT--CEEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEECCC
T ss_conf 89999999987998899646699935777887658158999999999999869--979997078
No 110
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 2i2f_A* 2q5f_A*
Probab=45.65 E-value=11 Score=15.77 Aligned_cols=38 Identities=24% Similarity=0.287 Sum_probs=30.5
Q ss_pred HHCCCCCEEEEECCCHHHHHHHHHHCC----CCCEEEEECCH
Q ss_conf 610478689997088379999984188----88699992998
Q gi|254780442|r 367 AETLRLSAIFCYTASGATGLRAARERP----KLEIIALSPMI 404 (480)
Q Consensus 367 A~~l~a~aIiv~T~sG~tA~~iS~~RP----~~pIiaiT~~~ 404 (480)
..+..++.+|+.|-+|.||--+|.--| .++.+.+||--
T Consensus 144 ~~~~~~DGlIVSTptGSTAY~~SaGGpIi~p~~~~~~ltpI~ 185 (272)
T 2i2c_A 144 FERFRGDGLCMSTPSGTTAYNKSLGGALMHPSIEAMQLTEMA 185 (272)
T ss_dssp EEEEEESEEEEECTGGGGTHHHHTTCCCCCTTSCEEEEEEES
T ss_pred EEEEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEEEC
T ss_conf 999984289999885269999758997028988706998644
No 111
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=45.21 E-value=12 Score=15.39 Aligned_cols=21 Identities=33% Similarity=0.387 Sum_probs=9.7
Q ss_pred CCCHHHHHHHHHHHCCCCEEE
Q ss_conf 773479999986200343355
Q gi|254780442|r 197 QSADDLLEIRKIISQNKIGLM 217 (480)
Q Consensus 197 r~~~di~~~r~~l~~~~~~Ii 217 (480)
-...|+.++++++.+.++.||
T Consensus 133 G~~~d~~~i~~~~~~~~i~lI 153 (394)
T 1o69_A 133 GNAAKMDEIVEICKENDIVLI 153 (394)
T ss_dssp GCCCCHHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHHHHCCCEEE
T ss_conf 885168999999997598688
No 112
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=45.20 E-value=12 Score=15.39 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=23.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 899988888989999999999999997499279999878
Q gi|254780442|r 33 VFRINMSHTSHDKMCELIKKIRAVELRSRRPIGILIDLQ 71 (480)
Q Consensus 33 v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 71 (480)
-+.+|=..|+.++.+++++..++ +-+.|++|.-
T Consensus 101 y~~vd~~~Gt~~dfk~LV~~aH~------~Gi~VilD~V 133 (680)
T 1cyg_A 101 FKKPNPFFGTLSDFQRLVDAAHA------KGIKVIIDFA 133 (680)
T ss_dssp EEEECTTTCCHHHHHHHHHHHHH------TTCEEEEEEC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHH------CCCEEEEEEC
T ss_conf 78627145999999999999997------7999999988
No 113
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=44.80 E-value=12 Score=15.35 Aligned_cols=51 Identities=8% Similarity=0.220 Sum_probs=28.2
Q ss_pred CHHHHHHHHHCCCCEEEEECCCCCH--HHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 9999999997399789998888898--9999999999999997499279999878
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSHTSH--DKMCELIKKIRAVELRSRRPIGILIDLQ 71 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SHg~~--e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 71 (480)
..+.++.|.+.|+|++|+-++.+.. +...+.++.+=.++.+.| +-+++|+.
T Consensus 34 ~~~~~~~~k~~G~N~vRl~~~~~~~~~~~~~~~ld~~v~~a~~~G--i~Vildlh 86 (302)
T 1bqc_A 34 HTQAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNR--LICMLEVH 86 (302)
T ss_dssp CTTHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTT--CEEEEEEG
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC--CEEEEEEC
T ss_conf 699999999769988997031655578770999999999999879--98999843
No 114
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structure initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=44.79 E-value=12 Score=15.35 Aligned_cols=88 Identities=16% Similarity=0.080 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCH--HHHHHHHHHH--H
Q ss_conf 11788875331247522220021587673689999999985139839980576788882889840--3477899998--5
Q gi|254780442|r 227 EYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTR--AEVSDVATAV--F 302 (480)
Q Consensus 227 ~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTR--aEv~Dvanav--~ 302 (480)
..++.+...++++-....-+.-+....... .-..+++.|+++|..|++=| ++++.... ..+...+.+. .
T Consensus 265 ~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~v~~a~~~Gl~V~~WT------vn~~~~~~~~~d~~~~~~~~~~~ 337 (356)
T 1ydy_A 265 GAMKQVAEYADGIGPDYHMLIEETSQPGNI-KLTGMVQDAQQNKLVVHPYT------VRSDKLPEYTPDVNQLYDALYNK 337 (356)
T ss_dssp THHHHHTTTCSEEEEBGGGTBCTTCBTTBC-CBCSHHHHHHHTTCEECCBC------BCTTSCCTTCSSHHHHHHHHHTT
T ss_pred HHHHHHHHHCCEECCCHHHCCCCCCCCCCC-CCHHHHHHHHHCCCEEEEEC------CCCHHHHHHCCCHHHHHHHHHHH
T ss_conf 789999863568534564214233565444-68999999998799999973------67756655226999999999986
Q ss_pred CCCCEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 19968998144435446589999999
Q gi|254780442|r 303 EEADAIMLSAETASGSYPVDAVRTMS 328 (480)
Q Consensus 303 dG~D~imLs~ETa~G~yP~~~v~~~~ 328 (480)
-|+|||+ -.||..++++|+
T Consensus 338 ~GVDGIi-------TD~P~~~~~~l~ 356 (356)
T 1ydy_A 338 AGVNGLF-------TDFPDKAVKFLN 356 (356)
T ss_dssp SCCSEEE-------ESCHHHHHHHHC
T ss_pred CCCCEEE-------ECCHHHHHHHHC
T ss_conf 4982999-------867989999669
No 115
>3cg0_A Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; signal receiver domain; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=43.88 E-value=13 Score=15.25 Aligned_cols=81 Identities=16% Similarity=0.070 Sum_probs=45.3
Q ss_pred HHHHHCCCCCEEEEEC-----CCH-HHHHHHHHHCCCCCEEEEECCH-HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 9986104786899970-----883-7999998418888699992998-99987666539379993687999999999999
Q gi|254780442|r 364 RQIAETLRLSAIFCYT-----ASG-ATGLRAARERPKLEIIALSPMI-QTARRLALVWGIHCVVTEDASDSDDMVNRACR 436 (480)
Q Consensus 364 v~lA~~l~a~aIiv~T-----~sG-~tA~~iS~~RP~~pIiaiT~~~-~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~ 436 (480)
.++..+-..+.|++-- ..| ..++.+.. .|..||+.+|... .-.+.-.+-.|+..++.+++ +.++.......
T Consensus 47 l~~~~~~~~dlvi~D~~mp~~~dG~~l~~~lr~-~~~~piI~lt~~~~~~~~~~a~~~Ga~~yl~KP~-~~~~L~~~i~~ 124 (140)
T 3cg0_A 47 VRCAPDLRPDIALVDIMLCGALDGVETAARLAA-GCNLPIIFITSSQDVETFQRAKRVNPFGYLAKPV-AADTLHRSIEM 124 (140)
T ss_dssp HHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHH-HSCCCEEEEECCCCHHHHHHHHTTCCSEEEEESC-CHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH-CCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHH
T ss_conf 999982799889997678767989999999985-7999689996689999999999879998997989-99999999999
Q ss_pred HHHHCCCCCCC
Q ss_conf 99988887788
Q gi|254780442|r 437 IVVEQGFGKPG 447 (480)
Q Consensus 437 ~l~~~g~i~~G 447 (480)
.+ ++...+.|
T Consensus 125 ~l-~~~~~eeg 134 (140)
T 3cg0_A 125 AI-HKKKLEEG 134 (140)
T ss_dssp HH-HHHHHCC-
T ss_pred HH-HHHHHHCC
T ss_conf 99-99999658
No 116
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=43.82 E-value=13 Score=15.24 Aligned_cols=51 Identities=18% Similarity=0.320 Sum_probs=32.4
Q ss_pred CHHHHHHHHHCCCCEEEEECCCC---------C-HHHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 99999999973997899988888---------9-89999999999999997499279999878
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSHT---------S-HDKMCELIKKIRAVELRSRRPIGILIDLQ 71 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SHg---------~-~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 71 (480)
.++.++.|.++|+|.+||-+++- . .+...+.++.+=+...+.| +.+++|+-
T Consensus 30 te~d~~~i~~~G~n~vRipi~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~g--i~vildlH 90 (343)
T 1ceo_A 30 TEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYN--LGLVLDMH 90 (343)
T ss_dssp CHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEEC
T ss_conf 09999999987998899455799922788887458899999999999999769--97999834
No 117
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotransferase; 16423107, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Salmonella typhimurium LT2}
Probab=43.62 E-value=13 Score=15.24 Aligned_cols=27 Identities=15% Similarity=0.167 Sum_probs=8.5
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCEEEE
Q ss_conf 058557734799999862003433555
Q gi|254780442|r 192 ALSFIQSADDLLEIRKIISQNKIGLMS 218 (480)
Q Consensus 192 alSfVr~~~di~~~r~~l~~~~~~Iia 218 (480)
++|.--+..++.++-+...+.+.++++
T Consensus 108 ~iS~SG~t~e~~~a~~~a~~~g~~~i~ 134 (355)
T 2a3n_A 108 TLSKSGDTKESVAIAEWCKAQGIRVVA 134 (355)
T ss_dssp EECSSSCCHHHHHHHHHHHHTTCEEEE
T ss_pred EECCCCCCHHHHHHHHHHHHCCCEEEE
T ss_conf 981899987999999999975984999
No 118
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=43.59 E-value=13 Score=15.22 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=46.2
Q ss_pred EEEEEECCHHHHHHHHHHHHHHHEEEEECCCCC------HHCCHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 355532785663117888753312475222200------21587673689999999985139839980
Q gi|254780442|r 215 GLMSKIEKPRAIEYASEIIQLSDAVMVARGDLG------VEMALELIPGIQKKLIRIARQLGKPVVIA 276 (480)
Q Consensus 215 ~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg------~e~~~e~vp~~Qk~ii~~~~~~~kpvivA 276 (480)
...........+++--+..+.+|.+++.=|.-+ .+-+--.+|..|..+|+...+.+||+|+.
T Consensus 553 ~~~~~~~~~~~~~~A~~~A~~aD~vivvvG~~~~~e~Eg~DR~~l~Lp~~Q~~Li~aV~a~~~~tVvV 620 (845)
T 3abz_A 553 GVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKANPNTVIV 620 (845)
T ss_dssp EEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCSSSCCCTTHHHHHHHHHHHCSCEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 31014561789999999876169169971157643313354422245110899999999878998999
No 119
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=43.52 E-value=12 Score=15.49 Aligned_cols=36 Identities=22% Similarity=0.351 Sum_probs=28.8
Q ss_pred HHCCCCCEEEEECCCHHHHHHHHHHCC----CCCEEEEEC
Q ss_conf 610478689997088379999984188----886999929
Q gi|254780442|r 367 AETLRLSAIFCYTASGATGLRAARERP----KLEIIALSP 402 (480)
Q Consensus 367 A~~l~a~aIiv~T~sG~tA~~iS~~RP----~~pIiaiT~ 402 (480)
.....++.+|+-|-+|.||--+|.--| ..+.+.+||
T Consensus 242 ~~~~~aDGlIVSTPTGSTAYslSAGGPIv~P~~~~i~ltP 281 (365)
T 3pfn_A 242 ITTVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITP 281 (365)
T ss_dssp EEEECSSEEEEECGGGGGTHHHHTTCCEECTTSCCEEEEE
T ss_pred EEEEECCCEEEECCCCCHHHHHHCCCCCCCCCCCCEEEEE
T ss_conf 8998239869979996167687526985376626378600
No 120
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=43.51 E-value=13 Score=15.21 Aligned_cols=21 Identities=33% Similarity=0.790 Sum_probs=14.3
Q ss_pred EEEEEEECCCCCCCCCEEEEEE
Q ss_conf 9998522278888641599999
Q gi|254780442|r 450 IIISAGLPLGTPGSTNMLRIAY 471 (480)
Q Consensus 450 VVvv~G~p~~~~G~TN~irv~~ 471 (480)
|+++-|..++..| .+.+|+-.
T Consensus 362 V~v~PG~~F~~~~-~~~iRis~ 382 (404)
T 2o1b_A 362 ILVAPGKPFGENG-NRYVRISL 382 (404)
T ss_dssp EECEESGGGCGGG-TTEEEEEC
T ss_pred EEEEECHHHCCCC-CCEEEEEE
T ss_conf 9999264548899-98799997
No 121
>3d0f_A Penicillin-binding 1 transmembrane protein MRCA; BIG_1156.2, structural genomics, PSI-2, protein structure initiative; 1.64A {Nitrosomonas europaea atcc 19718}
Probab=43.50 E-value=13 Score=15.21 Aligned_cols=44 Identities=7% Similarity=-0.018 Sum_probs=27.2
Q ss_pred CEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEE
Q ss_conf 18965899999953245564442212664422211336526740
Q gi|254780442|r 84 KVDLTEGQIFTLDNKDSLGSSDRVMLPHPEIFASIKIGDRLLID 127 (480)
Q Consensus 84 ~i~l~~G~~v~l~~~~~~~~~~~i~i~y~~l~~~ik~Gd~I~id 127 (480)
.+.++.|+.+++..+...--...+.-+.....+.+++||.|++-
T Consensus 50 ~v~~~~g~~~~i~~~~~~War~~~~~~~k~~~~~l~~GDvI~V~ 93 (106)
T 3d0f_A 50 EAFRKNGETIRITGDGLKAAHRFLSNDPKIGEKRIRPGALIRVK 93 (106)
T ss_dssp EEEETTSCEEEECGGGGSTTGGGTTTCTTTGGGSCCTTEEEEEE
T ss_pred EEEECCCCEEEECHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEE
T ss_conf 99967996699708998877765043555554336779899999
No 122
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransferase); PLP-binding enzyme, lysine biosynthesis, structural genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis H37RV}
Probab=43.46 E-value=10 Score=16.04 Aligned_cols=13 Identities=15% Similarity=0.388 Sum_probs=7.3
Q ss_pred HHCCCCCEEEEEC
Q ss_conf 2113365267406
Q gi|254780442|r 116 ASIKIGDRLLIDD 128 (480)
Q Consensus 116 ~~ik~Gd~I~idD 128 (480)
.-+.+||.|++.+
T Consensus 105 ~l~~~gd~Vlv~~ 117 (411)
T 2o0r_A 105 GLVEPGSEVLLIE 117 (411)
T ss_dssp HHCCTTCEEEEEE
T ss_pred HHCCCCCEEEECC
T ss_conf 7538998799847
No 123
>3fxa_A SIS domain protein; YP_013136.1, putative sugar-phosphate isomerase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=43.44 E-value=8.4 Score=16.61 Aligned_cols=34 Identities=12% Similarity=0.204 Sum_probs=23.1
Q ss_pred CCCEEEEECCCHHHHHHH-----HHHCCCCCEEEEECCHH
Q ss_conf 786899970883799999-----84188886999929989
Q gi|254780442|r 371 RLSAIFCYTASGATGLRA-----ARERPKLEIIALSPMIQ 405 (480)
Q Consensus 371 ~a~aIiv~T~sG~tA~~i-----S~~RP~~pIiaiT~~~~ 405 (480)
.-+.+|++|.||+|...+ ++-+ .+|++++|.+..
T Consensus 92 ~~Dv~I~iS~SG~t~e~i~~~~~ak~~-g~~vI~IT~~~~ 130 (201)
T 3fxa_A 92 KEDILILISKGGNTGELLNLIPACKTK-GSTLIGVTENPD 130 (201)
T ss_dssp TTCEEEEECSSSCCHHHHTTHHHHHHH-TCEEEEEESCTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHC-CCEEEEEECCCC
T ss_conf 788899878999957899999999983-980899836899
No 124
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=43.23 E-value=13 Score=15.18 Aligned_cols=11 Identities=18% Similarity=0.036 Sum_probs=4.1
Q ss_pred CEEECCCCCCC
Q ss_conf 08711456446
Q gi|254780442|r 151 ISIADRKGISF 161 (480)
Q Consensus 151 G~l~s~Kgvni 161 (480)
|..-.-+|+|+
T Consensus 16 G~~~~l~Gvn~ 26 (291)
T 1egz_A 16 EKAKSFAGNSL 26 (291)
T ss_dssp TEECCCEEEEE
T ss_pred CCEEEEEEEEC
T ss_conf 93899988752
No 125
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken structural genomics/proteomics initiative, RSGI; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=43.01 E-value=13 Score=15.16 Aligned_cols=178 Identities=18% Similarity=0.178 Sum_probs=99.0
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH--------HHEE
Q ss_conf 55676556778998873488532505855773479999986200343355532785663117888753--------3124
Q gi|254780442|r 168 TQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQL--------SDAV 239 (480)
Q Consensus 168 l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~--------sDgi 239 (480)
-|..|+.|...+-.-+.+.++--++ =++..+..+|+.+...++++.+=|-=|.|-...+.-+.+ +|.|
T Consensus 30 ~~~~T~~~i~~lc~~A~~~~~~avc----V~p~~v~~a~~~l~~s~vkv~tVigFP~G~~~~~~K~~E~~~Ai~~GAdEI 105 (234)
T 1n7k_A 30 SPRATEEDVRNLVREASDYGFRCAV----LTPVYTVKISGLAEKLGVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATEL 105 (234)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEE----ECHHHHHHHHHHHHHHTCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCCHHHHHHHHHHHHHHCCCEEE----ECHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 9889999999999999984991899----895879999998347996489984489988858789999999998699879
Q ss_pred --EEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHH-HHCCCCEEEECCCCCC
Q ss_conf --7522220021587673689999999985139839980576788882889840347789999-8519968998144435
Q gi|254780442|r 240 --MVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATA-VFEEADAIMLSAETAS 316 (480)
Q Consensus 240 --miaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvana-v~dG~D~imLs~ETa~ 316 (480)
++.. +. ..+.....-+.+++.|...|+|+=|- || .+.=|..|+..+... +.-|+|-|- |+.
T Consensus 106 D~V~n~---~~--~~~~~~~~v~~~~~~~~~~~~~lKVI---lE----t~~L~~~~i~~a~~ia~~aGadfVK----TST 169 (234)
T 1n7k_A 106 DVVPHL---SL--GPEAVYREVSGIVKLAKSYGAVVKVI---LE----APLWDDKTLSLLVDSSRRAGADIVK----TST 169 (234)
T ss_dssp EECCCG---GG--CHHHHHHHHHHHHHHHHHTTCEEEEE---CC----GGGSCHHHHHHHHHHHHHTTCSEEE----SCC
T ss_pred EEEECH---HC--CCHHHHHHHHHHHHHHHHCCCEEEEE---EE----CCCCCHHHHHHHHHHHHHHCCCEEE----ECC
T ss_conf 998410---10--20005999999999977359758999---86----4534468999999999983554046----457
Q ss_pred CCC-----HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCH
Q ss_conf 446-----589999999988763010124444443203878888789999999986104786899970883
Q gi|254780442|r 317 GSY-----PVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASG 382 (480)
Q Consensus 317 G~y-----P~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG 382 (480)
|.+ |.+.+..++. ++.. .-..+-.....+..+++..- .++|+.| =|.||
T Consensus 170 G~~~~gat~~~~~~l~~~-~~~~--------~vgIKaSGGIrt~~~a~~~l------~aGa~rI--GtSs~ 223 (234)
T 1n7k_A 170 GVYTKGGDPVTVFRLASL-AKPL--------GMGVKASGGIRSGIDAVLAV------GAGADII--GTSSA 223 (234)
T ss_dssp SSSCCCCSHHHHHHHHHH-HGGG--------TCEEEEESSCCSHHHHHHHH------HTTCSEE--EETTH
T ss_pred CCCCCCCCHHHHHHHHHH-HCCC--------CCEEEEECCCCCHHHHHHHH------HHCCHHE--ECCHH
T ss_conf 767888776999999997-2589--------91487302889999999999------8066314--20619
No 126
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=42.55 E-value=11 Score=15.89 Aligned_cols=33 Identities=18% Similarity=0.024 Sum_probs=22.9
Q ss_pred CCEEEEECCCHHHHHHH-----HHHCCCCCEEEEECCHH
Q ss_conf 86899970883799999-----84188886999929989
Q gi|254780442|r 372 LSAIFCYTASGATGLRA-----ARERPKLEIIALSPMIQ 405 (480)
Q Consensus 372 a~aIiv~T~sG~tA~~i-----S~~RP~~pIiaiT~~~~ 405 (480)
-+.+|++|.||+|...+ ++.+ .++|+++|.+..
T Consensus 80 ~Dl~I~iS~sG~t~~~~~~~~~ak~~-g~~ii~IT~~~~ 117 (186)
T 1m3s_A 80 GDLVIIGSGSGETKSLIHTAAKAKSL-HGIVAALTINPE 117 (186)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHC-CCEEEEEECCCC
T ss_conf 99999983897514699999999987-995999979999
No 127
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside hydrolase family 5, michaelis complex, SKEW-BOAT, distortio; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=42.55 E-value=13 Score=15.11 Aligned_cols=15 Identities=27% Similarity=0.290 Sum_probs=6.9
Q ss_pred HHHHHHHHCCCEEEE
Q ss_conf 999998513983998
Q gi|254780442|r 261 KLIRIARQLGKPVVI 275 (480)
Q Consensus 261 ~ii~~~~~~~kpviv 275 (480)
+++..|.++|--||+
T Consensus 84 ~~v~~a~~~Gi~Vil 98 (303)
T 7a3h_A 84 EAVEAAIDLDIYVII 98 (303)
T ss_dssp HHHHHHHHHTCEEEE
T ss_pred HHHHHHHHCCCEEEE
T ss_conf 999999987998999
No 128
>2zru_A Isopentenyl-diphosphate delta-isomerase; type 2, IDI, FMN, isopentenyl diphosphate isomerase, cytoplasm, flavoprotein, isoprene biosynthesis; HET: FMN; 2.00A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A*
Probab=42.54 E-value=13 Score=15.11 Aligned_cols=30 Identities=20% Similarity=0.088 Sum_probs=17.7
Q ss_pred CCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 983998057678888288984034778999985199689981
Q gi|254780442|r 270 GKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS 311 (480)
Q Consensus 270 ~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs 311 (480)
+.|||...-+-.. .||+-|+.-|||+||+.
T Consensus 267 ~vpVIadGGIr~g------------~DV~KALaLGAdaV~iG 296 (368)
T 2zru_A 267 DSFLVGSGGIRSG------------LDAAKAIALGADIAGMA 296 (368)
T ss_dssp TCEEEEESSCCSH------------HHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCCCCH------------HHHHHHHHCCCCCHHHH
T ss_conf 9759971898888------------99999998399952307
No 129
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=42.22 E-value=9.4 Score=16.25 Aligned_cols=37 Identities=22% Similarity=0.355 Sum_probs=29.4
Q ss_pred HHCCCCCEEEEECCCHHHHHHHHHHCC----CCCEEEEECC
Q ss_conf 610478689997088379999984188----8869999299
Q gi|254780442|r 367 AETLRLSAIFCYTASGATGLRAARERP----KLEIIALSPM 403 (480)
Q Consensus 367 A~~l~a~aIiv~T~sG~tA~~iS~~RP----~~pIiaiT~~ 403 (480)
.....++.+|+.|-+|.||--+|.--| ..+.+.+||-
T Consensus 183 ~~~~~~DGlIvsTpTGSTAYslSaGGPIv~p~~~~i~vtpi 223 (307)
T 1u0t_A 183 VSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPN 223 (307)
T ss_dssp EEEEEESEEEEECTGGGGTHHHHTTCCEECTTCCCEEEEEE
T ss_pred EEEEECCEEEECCCCCCCHHHHHCCCCCCCCCCCEEEEEEC
T ss_conf 99996057998274544323776799966832230443004
No 130
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=41.88 E-value=14 Score=15.04 Aligned_cols=225 Identities=14% Similarity=0.155 Sum_probs=99.6
Q ss_pred CCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCC-----EE--ECC-
Q ss_conf 7999999999739978999888889899999999999999974992799998789867886548981-----89--658-
Q gi|254780442|r 18 FSEDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELRSRRPIGILIDLQGPKFRVGKFANSK-----VD--LTE- 89 (480)
Q Consensus 18 ~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkiR~g~~~~~~-----i~--l~~- 89 (480)
.-.+.|+.--+.|--|.=+|+. +.|+.+..+ +++++.+.|+=|.+ .+| .+ .+.+.. +. +.+
T Consensus 5 ~~k~ll~~A~~~~yAV~AfNv~--~~e~~~avi----~AAee~~sPvIlq~-s~~-~~---~~~g~~~~~~~~~~~~~~~ 73 (323)
T 2isw_A 5 TLRQMLGEARKHKYGVGAFNVN--NMEQIQGIM----KAVVQLKSPVILQC-SRG-AL---KYSDMIYLKKLCEAALEKH 73 (323)
T ss_dssp CHHHHHHHHHHTTCCEEEEECC--SHHHHHHHH----HHHHHTTCCEEEEE-EHH-HH---HHTTTHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHCCEEEEEEEEC--CHHHHHHHH----HHHHHHCCCEEEEC-CCC-HH---HHCCHHHHHHHHHHHHHHC
T ss_conf 7999999999889579997538--999999999----99999499999997-855-78---6689788999999999975
Q ss_pred -CCEEEEECCCCCCCCCCCCCCCCCCHHHCCCC-CEEEEECCCEEEC--------CCC-CCCCEEEEEECCCCEEECCCC
Q ss_conf -99999953245564442212664422211336-5267406842210--------234-454112455138808711456
Q gi|254780442|r 90 -GQIFTLDNKDSLGSSDRVMLPHPEIFASIKIG-DRLLIDDGRVKLC--------VQE-KGIGFIKCKVIAGISIADRKG 158 (480)
Q Consensus 90 -G~~v~l~~~~~~~~~~~i~i~y~~l~~~ik~G-d~I~idDG~i~l~--------V~~-~~~~~i~c~V~~gG~l~s~Kg 158 (480)
+--|-+..|.. -++..+-+.++.| +.|.+|-....|+ |.+ .....+..+.+-|-.=+..-+
T Consensus 74 ~~VPv~lHlDH~--------~~~e~i~~ai~~GftSVMiDgS~lp~eeNI~~Tk~vv~~Ah~~gv~VEaElG~vgg~ed~ 145 (323)
T 2isw_A 74 PDIPICIHLDHG--------DTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEED 145 (323)
T ss_dssp TTSCEEEEEEEE--------CSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC------
T ss_pred CCCCEEEECCCC--------CCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCC
T ss_conf 999989979998--------899999999971898699838823399999999999999865387189964203676767
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHE
Q ss_conf 44678544555676556778998873488532505855773479999986200343355532785663117888753312
Q gi|254780442|r 159 ISFPDTFLTTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDA 238 (480)
Q Consensus 159 vnip~~~i~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDg 238 (480)
+. .-..+|+-| +..+|. +..++|++|+||=...-- .+--.+++-+.-++.|++|-+..+-
T Consensus 146 ~~------~~~~~T~Pe-eA~~Fv-~~TgvD~LAvaiGn~HG~------------yk~~~~~~~~l~~~~l~~I~~~~~~ 205 (323)
T 2isw_A 146 VQ------NTVQLTEPQ-DAKKFV-ELTGVDALAVAIGTSHGA------------YKFKSESDIRLAIDRVKTISDLTGI 205 (323)
T ss_dssp ----------CCCCCHH-HHHHHH-HHHCCSEEEECSSCCSSS------------BCCCC----CCCCHHHHHHHHHHCS
T ss_pred CC------CCCCCCCHH-HHHHHH-HCCCCCEEEECCCCCCCC------------CCCCCCCCHHHCHHHHHHHHHCCCC
T ss_conf 65------545579989-999998-611888442010000366------------7787887410159999987631498
Q ss_pred EEEECCCCCHHCCHHHHHHH-------------HHHHHHHHHHCCC-EEEEEHHHHHHH
Q ss_conf 47522220021587673689-------------9999999851398-399805767888
Q gi|254780442|r 239 VMVARGDLGVEMALELIPGI-------------QKKLIRIARQLGK-PVVIATQMLESM 283 (480)
Q Consensus 239 imiaRGDLg~e~~~e~vp~~-------------Qk~ii~~~~~~~k-pvivATq~leSM 283 (480)
=++-.|-=| +|.+++-.+ ...-+++|.++|- .+=+.|.+-.-+
T Consensus 206 PLVlHGgS~--~~~~~~~~~~~~g~~~hg~~G~~~e~i~~ai~~GV~KiNi~T~~~~a~ 262 (323)
T 2isw_A 206 PLVMHGSSS--VPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVDSDSRMAM 262 (323)
T ss_dssp CEEECSCCC--CCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHH
T ss_pred CEEEECCCC--CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHH
T ss_conf 768418877--750367788751775667789989999999988988845871689999
No 131
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=41.75 E-value=14 Score=15.02 Aligned_cols=32 Identities=22% Similarity=0.297 Sum_probs=22.1
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 99888889899999999999999974992799998789
Q gi|254780442|r 35 RINMSHTSHDKMCELIKKIRAVELRSRRPIGILIDLQG 72 (480)
Q Consensus 35 RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~G 72 (480)
++|=..|+.++.+++++..++ .| +.|++|+-=
T Consensus 107 ~id~~~Gt~~dfk~LV~~aH~----~G--I~VilD~V~ 138 (686)
T 1d3c_A 107 KTNPAYGTIADFQNLIAAAHA----KN--IKVIIDFAP 138 (686)
T ss_dssp EECTTTCCHHHHHHHHHHHHH----TT--CEEEEEECT
T ss_pred CCCCCCCCHHHHHHHHHHHHH----CC--CEEEEEECC
T ss_conf 748456999999999999998----89--999999754
No 132
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=41.40 E-value=14 Score=14.99 Aligned_cols=21 Identities=24% Similarity=0.586 Sum_probs=11.9
Q ss_pred CCHHHHHHHHHC-CCCEEEEEC
Q ss_conf 799999999973-997899988
Q gi|254780442|r 18 FSEDVINRLHEE-GTDVFRINM 38 (480)
Q Consensus 18 ~~~e~i~~l~~a-G~nv~RiN~ 38 (480)
.+++.+..|.+. |+|++|+-|
T Consensus 54 ~~~~~~~~l~~~wG~N~VRlp~ 75 (364)
T 1g01_A 54 VNENAFVALSNDWGSNMIRLAM 75 (364)
T ss_dssp CSHHHHHHHHTTSCCSEEEEEE
T ss_pred CCHHHHHHHHHHCCCCEEEEEE
T ss_conf 7899999999863997799853
No 133
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=41.34 E-value=14 Score=14.98 Aligned_cols=11 Identities=0% Similarity=0.018 Sum_probs=3.9
Q ss_pred HHHHHHHHHHH
Q ss_conf 63117888753
Q gi|254780442|r 225 AIEYASEIIQL 235 (480)
Q Consensus 225 al~nl~eI~~~ 235 (480)
-++.+..+.++
T Consensus 147 d~~~v~~vr~~ 157 (332)
T 2ozt_A 147 EQAILKALLAA 157 (332)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999985
No 134
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=41.14 E-value=14 Score=14.96 Aligned_cols=22 Identities=14% Similarity=0.377 Sum_probs=17.3
Q ss_pred CHHHHHHHHHCCCCEEEEECCC
Q ss_conf 9999999997399789998888
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSH 40 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SH 40 (480)
-.+.++.|..+|+|++||-+++
T Consensus 46 ~~~~~~~l~~~G~N~VRlpi~~ 67 (358)
T 1ece_A 46 YRSMLDQIKSLGYNTIRLPYSD 67 (358)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEG
T ss_pred HHHHHHHHHHCCCCEEECCCCH
T ss_conf 9999999997799889825679
No 135
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium LT2}
Probab=40.39 E-value=14 Score=14.88 Aligned_cols=36 Identities=28% Similarity=0.425 Sum_probs=28.7
Q ss_pred HCCCCCEEEEECCCHHHHHHHHHHCC----CCCEEEEECC
Q ss_conf 10478689997088379999984188----8869999299
Q gi|254780442|r 368 ETLRLSAIFCYTASGATGLRAARERP----KLEIIALSPM 403 (480)
Q Consensus 368 ~~l~a~aIiv~T~sG~tA~~iS~~RP----~~pIiaiT~~ 403 (480)
.+..++.+++-|-+|.||--+|.--| .++.+.+||-
T Consensus 172 ~~~~gDGlIvSTptGSTAY~lSaGGpIv~p~~~~~~itpI 211 (292)
T 2an1_A 172 FSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPM 211 (292)
T ss_dssp EEEEESEEEEECTGGGGTHHHHTTCCEECTTCSEEEEEEE
T ss_pred EEECCCCEEECCCCCHHHHHHHCCCCCCCCCHHEEEEEEC
T ss_conf 4774588999866765799976899742731200453122
No 136
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=40.11 E-value=15 Score=14.85 Aligned_cols=142 Identities=18% Similarity=0.166 Sum_probs=71.8
Q ss_pred CCHHHCCCC-CEEEEECCCEEEC--------CCC-CCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 422211336-5267406842210--------234-454112455138808711456446785445556765567789988
Q gi|254780442|r 113 EIFASIKIG-DRLLIDDGRVKLC--------VQE-KGIGFIKCKVIAGISIADRKGISFPDTFLTTQALTQKDREDLHAA 182 (480)
Q Consensus 113 ~l~~~ik~G-d~I~idDG~i~l~--------V~~-~~~~~i~c~V~~gG~l~s~Kgvnip~~~i~l~~ltekD~~di~~a 182 (480)
.+.+.++.| +.|.+|-..+.|+ |.+ .....+..+.+-|..-+...+....+ .-..+|+-+ +..+|.
T Consensus 89 ~i~~ai~~GftSVMiD~S~l~~eeNi~~Tk~vv~~ah~~gv~VEaElG~igg~ed~~~~~~---~~~~~T~Pe-ea~~Fv 164 (286)
T 1gvf_A 89 DIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDA---ESAFLTDPQ-EAKRFV 164 (286)
T ss_dssp HHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC--------------CCSSCCHH-HHHHHH
T ss_pred HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC---CCCCCCCHH-HHHHHH
T ss_conf 9999861688648764898999999999999999998642426764413567777766554---213589999-999999
Q ss_pred HHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHH
Q ss_conf 73488532505855773479999986200343355532785663117888753312475222200215876736899999
Q gi|254780442|r 183 LQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKL 262 (480)
Q Consensus 183 ~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~i 262 (480)
+.-++|++|+||=...-. + |=+-+.-++-|++|-+..|-=+|=.|-=| +|.++
T Consensus 165 -~~TgvD~LAvaiGt~HG~---------------y-~~~p~L~~~~l~~I~~~~~vPLVLHGgSG--~p~e~-------- 217 (286)
T 1gvf_A 165 -ELTGVDSLAVAIGTAHGL---------------Y-SKTPKIDFQRLAEIREVVDVPLVLHGASD--VPDEF-------- 217 (286)
T ss_dssp -HHHCCSEEEECSSCCSSC---------------C-SSCCCCCHHHHHHHHHHCCSCEEECCCTT--CCHHH--------
T ss_pred -HHHCCCEEHHHHCCCCCC---------------C-CCCCCCCCHHHHHHHHCCCCCEEEECCCC--CCHHH--------
T ss_conf -987888231552665666---------------5-89985430356676524699867458999--97689--------
Q ss_pred HHHHHHCC-CEEEEEHHHHHHHHH
Q ss_conf 99985139-839980576788882
Q gi|254780442|r 263 IRIARQLG-KPVVIATQMLESMVT 285 (480)
Q Consensus 263 i~~~~~~~-kpvivATq~leSM~~ 285 (480)
+++|.++| ..+=+.|.+...+..
T Consensus 218 i~~ai~~Gi~KiNi~T~l~~a~~~ 241 (286)
T 1gvf_A 218 VRRTIELGVTKVNVATELKIAFAG 241 (286)
T ss_dssp HHHHHHTTEEEEEECHHHHHHHHH
T ss_pred HHHHHHCCEEEEEECCHHHHHHHH
T ss_conf 999997692899957289999999
No 137
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=39.80 E-value=15 Score=14.82 Aligned_cols=19 Identities=5% Similarity=0.221 Sum_probs=6.7
Q ss_pred CHHHHHHHHH-CCCCEEEEE
Q ss_conf 9999999997-399789998
Q gi|254780442|r 19 SEDVINRLHE-EGTDVFRIN 37 (480)
Q Consensus 19 ~~e~i~~l~~-aG~nv~RiN 37 (480)
+++.++.|.+ -|+|++|+-
T Consensus 40 ~~~~~~~l~~~~g~N~VR~~ 59 (293)
T 1tvn_A 40 TAETVAKAKTEFNATLIRAA 59 (293)
T ss_dssp SHHHHHHHHHHHCCSEEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEE
T ss_conf 79999999987799199960
No 138
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=39.71 E-value=15 Score=14.81 Aligned_cols=200 Identities=14% Similarity=0.030 Sum_probs=102.0
Q ss_pred CCCHHHHHHHHHHHHCCCCCEECCCCCCCCH------HHHH-HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEE
Q ss_conf 6765567789988734885325058557734------7999-99862003433555327856631178887533124752
Q gi|254780442|r 170 ALTQKDREDLHAALQTCEVDWVALSFIQSAD------DLLE-IRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVA 242 (480)
Q Consensus 170 ~ltekD~~di~~a~~~~~vD~ialSfVr~~~------di~~-~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimia 242 (480)
.+|..++..|.-.+.+.++|.|=+.|--+.. |..+ ++.+............-....++.....-.....+...
T Consensus 23 ~~s~~~k~~i~~~L~~~Gi~~IEvG~~~~~~~~~~~~d~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGA 102 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEECCSHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 98999999999999983979999679767132788888999998522110445655321144079998569988999850
Q ss_pred CCCCC----HHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHH-HHCCCCEEEECCCCCCC
Q ss_conf 22200----21587673689999999985139839980576788882889840347789999-85199689981444354
Q gi|254780442|r 243 RGDLG----VEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATA-VFEEADAIMLSAETASG 317 (480)
Q Consensus 243 RGDLg----~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvana-v~dG~D~imLs~ETa~G 317 (480)
..|+- +....++.......+++.+...++.+-....+.-++.....-+-.+.-+.+.. .-.|+|.|.|. -|.=.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~i~l~-Dt~G~ 181 (298)
T 2cw6_A 103 ASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG-DTIGV 181 (298)
T ss_dssp SCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE-ETTSC
T ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC-CCCCC
T ss_conf 32999999864439989988888899998648546788886550353454148999999999997288634668-85323
Q ss_pred CCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCH
Q ss_conf 46589999999988763010-124444443203878888789999999986104786899970883
Q gi|254780442|r 318 SYPVDAVRTMSLVASSAERD-SSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASG 382 (480)
Q Consensus 318 ~yP~~~v~~~~~i~~~~E~~-~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG 382 (480)
..|.++-+....+....... ..+ ....+.- +|.+-...|-..+++. |=-|-.|
T Consensus 182 ~~P~~v~~lv~~~~~~~~~~~i~~---------H~Hn~~G--lA~an~laAi~aGa~~-vd~ti~G 235 (298)
T 2cw6_A 182 GTPGIMKDMLSAVMQEVPLAALAV---------HCHDTYG--QALANTLMALQMGVSV-VDSSVAG 235 (298)
T ss_dssp CCHHHHHHHHHHHHHHSCGGGEEE---------EEBCTTS--CHHHHHHHHHHTTCCE-EEEBTTS
T ss_pred CCHHHHHHHHHHHHHHCCCCCEEE---------EECCCCC--HHHHHHHHHHHHCCCE-EEECCCC
T ss_conf 788999999999998489984588---------9679832--8999999999919999-9953514
No 139
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=39.71 E-value=12 Score=15.51 Aligned_cols=52 Identities=23% Similarity=0.369 Sum_probs=35.6
Q ss_pred HHCCCCCEEEEECCCHHHHHHHHHHCC----CCCEEEEECCHHHHHHHHHHCCCEEEEECCC
Q ss_conf 610478689997088379999984188----8869999299899987666539379993687
Q gi|254780442|r 367 AETLRLSAIFCYTASGATGLRAARERP----KLEIIALSPMIQTARRLALVWGIHCVVTEDA 424 (480)
Q Consensus 367 A~~l~a~aIiv~T~sG~tA~~iS~~RP----~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~ 424 (480)
..+..++.+++-|.+|.||--+|.--| ..+.+.+||--. .++.| .|+..+..
T Consensus 168 ~~~~~gDGvIVSTptGSTAY~lSaGGpIv~p~~~~i~itPIaP----~~l~~--rplVl~~~ 223 (278)
T 1z0s_A 168 VDRIRCDGFIVATQIGSTGYAFSAGGPVVEPYLECFILIPIAP----FRFGW--KPYVVSME 223 (278)
T ss_dssp EEEEEESEEEEEESGGGGTHHHHTTCCEECTTSCCEEEEEESC----CSSBC--CCEEECTT
T ss_pred EEEEECCEEEEECCCCCHHHHHHCCCCEECCCCCCEEEEECCC----CCCCC--CCEEECCC
T ss_conf 5778788899927875188885389964668887358752366----66689--88797899
No 140
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, JCSG, protein structure initiative, PSI; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=39.57 E-value=15 Score=14.79 Aligned_cols=91 Identities=14% Similarity=0.192 Sum_probs=48.2
Q ss_pred HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH
Q ss_conf 99986200343355532785663117888753312475222200215876736899999999851398399805767888
Q gi|254780442|r 204 EIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESM 283 (480)
Q Consensus 204 ~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM 283 (480)
.+.+.+.+++..++++++.. ..+.+ +.+|. -++....+ .-...+..|.+.++|+++.|-=++
T Consensus 27 ~I~~~~~~~~~~lv~~id~~-~~~~l----~~~DV--------vIDFS~p~---~~~~~l~~~~~~~~plViGTTG~~-- 88 (228)
T 1vm6_A 27 EIQKVFSEKGHELVLKVDVN-GVEEL----DSPDV--------VIDFSSPE---ALPKTVDLCKKYRAGLVLGTTALK-- 88 (228)
T ss_dssp HHHHHHHHTTCEEEEEEETT-EEEEC----SCCSE--------EEECSCGG---GHHHHHHHHHHHTCEEEECCCSCC--
T ss_pred HHHHHHHCCCCEEEEEECCC-CHHHH----CCCCE--------EEECCCCH---HHHHHHHHHHHCCCCEEEEECCCC--
T ss_conf 99999976999599997888-37672----59999--------99898830---335568999863876499806888--
Q ss_pred HHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH
Q ss_conf 82889840347789999851996899814443544658
Q gi|254780442|r 284 VTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPV 321 (480)
Q Consensus 284 ~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~ 321 (480)
..+...+..+-. --.++++.-.++|-.-.
T Consensus 89 -------~~~~~~l~~~~~--~~~i~~a~NfSlGv~ll 117 (228)
T 1vm6_A 89 -------EEHLQMLRELSK--EVPVVQAYNFSIGINVL 117 (228)
T ss_dssp -------HHHHHHHHHHTT--TSEEEECSCCCHHHHHH
T ss_pred -------HHHHHHHHHHHC--CCCEEECCCHHHHHHHH
T ss_conf -------789999999824--18876054074899999
No 141
>3crn_A Response regulator receiver domain protein, CHEY- like; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=39.56 E-value=15 Score=14.79 Aligned_cols=73 Identities=12% Similarity=0.149 Sum_probs=43.3
Q ss_pred HHHHCCCCCEEEEEC----CCHH-HHHHHHHHCCCCCEEEEECCH-HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 986104786899970----8837-999998418888699992998-9998766653937999368799999999999999
Q gi|254780442|r 365 QIAETLRLSAIFCYT----ASGA-TGLRAARERPKLEIIALSPMI-QTARRLALVWGIHCVVTEDASDSDDMVNRACRIV 438 (480)
Q Consensus 365 ~lA~~l~a~aIiv~T----~sG~-tA~~iS~~RP~~pIiaiT~~~-~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l 438 (480)
+...+-..+.|++-- .+|. ..+.+.+..|..||+.+|... .-.+.-.+-.|+.-++.++++ .++......+.+
T Consensus 41 ~~l~~~~~dlvllD~~mp~~~G~el~~~lr~~~~~~piI~lT~~~~~~~~~~a~~~Ga~~yl~KP~~-~~~L~~~i~~~L 119 (132)
T 3crn_A 41 AKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYASLENSVFSLNAGADAYIMKPVN-PRDLLEKIKEKL 119 (132)
T ss_dssp HHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCCCHHHHHHHHHTTCSEEEESSCC-HHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCC-HHHHHHHHHHHH
T ss_conf 9998579999997044899608999999998489998999976599999999998799899989799-999999999999
No 142
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=39.50 E-value=15 Score=14.78 Aligned_cols=150 Identities=17% Similarity=0.159 Sum_probs=70.4
Q ss_pred CCHHHCCCC-CEEEEECCCEEEC--------CCCC-CCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 422211336-5267406842210--------2344-54112455138808711456446785445556765567789988
Q gi|254780442|r 113 EIFASIKIG-DRLLIDDGRVKLC--------VQEK-GIGFIKCKVIAGISIADRKGISFPDTFLTTQALTQKDREDLHAA 182 (480)
Q Consensus 113 ~l~~~ik~G-d~I~idDG~i~l~--------V~~~-~~~~i~c~V~~gG~l~s~Kgvnip~~~i~l~~ltekD~~di~~a 182 (480)
.+-+.++.| +.|.+|-..+.|+ |.+. ..-.+..+.+-|..-+..-++... -.-..+|+- .+..+|.
T Consensus 87 ~i~~ai~~GftSVMiDgS~l~~eeNi~~T~~vv~~Ah~~gv~VEaElG~igg~Ed~~~~~---~~~~~~T~P-eea~~Fv 162 (305)
T 1rvg_A 87 SVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVD---EKDALLTNP-EEARIFM 162 (305)
T ss_dssp HHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC---------CCTTCCCH-HHHHHHH
T ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC---CCCCCCCCH-HHHHHHH
T ss_conf 899998749987986499888899999999999986151887665022125655555666---432456899-9999999
Q ss_pred HHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHH--
Q ss_conf 734885325058557734799999862003433555327--8566311788875331247522220021587673689--
Q gi|254780442|r 183 LQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIE--KPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGI-- 258 (480)
Q Consensus 183 ~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE--~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~-- 258 (480)
+..++|++|+||=+..- .+ |=+ -..-++-|++|-+..|-=++=-|- --+|.+.+-..
T Consensus 163 -~~TgvD~LAvaiGn~HG---------------~y-k~~~~~~l~~~~l~~i~~~~~~PLvlHG~--S~~~~~~~~~~~~ 223 (305)
T 1rvg_A 163 -ERTGADYLAVAIGTSHG---------------AY-KGKGRPFIDHARLERIARLVPAPLVLHGA--SAVPPELVERFRA 223 (305)
T ss_dssp -HHHCCSEEEECSSCCSS---------------SB-CSSSSCCCCHHHHHHHHHHCCSCEEECSC--CCCCHHHHHHHHH
T ss_pred -HHHCCCEEEEEECCCCC---------------CC-CCCCCCCCHHHHHHHHHCCCCCCEEEECC--CCCCHHHHHHHHC
T ss_conf -97588768543022457---------------66-88888662488999996167998786689--7773777777630
Q ss_pred -----------HHHHHHHHHHCCCEEE-EEHHHHHHHHH
Q ss_conf -----------9999999851398399-80576788882
Q gi|254780442|r 259 -----------QKKLIRIARQLGKPVV-IATQMLESMVT 285 (480)
Q Consensus 259 -----------Qk~ii~~~~~~~kpvi-vATq~leSM~~ 285 (480)
...-+++|.++|---| +.|.+...+..
T Consensus 224 ~~~~lHG~sG~~~e~i~~ai~~GI~KiNi~T~l~~a~~~ 262 (305)
T 1rvg_A 224 SGGEIGEAAGIHPEDIKKAISLGIAKINTDTDLRLAFTA 262 (305)
T ss_dssp TTCCCCSCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHH
T ss_conf 476557778999999999998695599978189999999
No 143
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=39.25 E-value=12 Score=15.38 Aligned_cols=26 Identities=15% Similarity=0.313 Sum_probs=18.9
Q ss_pred CCCCCEEEEECCCEEECCCCCCCCEEE
Q ss_conf 133652674068422102344541124
Q gi|254780442|r 118 IKIGDRLLIDDGRVKLCVQEKGIGFIK 144 (480)
Q Consensus 118 ik~Gd~I~idDG~i~l~V~~~~~~~i~ 144 (480)
-|+|..|.|+|+ |...|.++.++.++
T Consensus 6 Rk~gEsI~Igd~-I~I~Vl~i~g~qVr 31 (70)
T 2jpp_A 6 RKVGESINIGDD-ITITILGVSGQQVR 31 (70)
T ss_dssp EETTCEEEETTT-EEEEEEEEETTEEE
T ss_pred EECCCEEEECCC-EEEEEEEEECCEEE
T ss_conf 037998997999-89999997099899
No 144
>3fkj_A Putative phosphosugar isomerases; NP_459564.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=39.11 E-value=11 Score=15.68 Aligned_cols=16 Identities=19% Similarity=0.335 Sum_probs=6.4
Q ss_pred CCHHHHHHHHHHHHHH
Q ss_conf 9999999999999998
Q gi|254780442|r 425 SDSDDMVNRACRIVVE 440 (480)
Q Consensus 425 ~~~~~~i~~a~~~l~~ 440 (480)
+...+......+.+++
T Consensus 271 ~~~~~~~~~~~~~i~~ 286 (347)
T 3fkj_A 271 GRTRPLDDRAIRFIER 286 (347)
T ss_dssp STTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
T ss_conf 9658999999999998
No 145
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, transcription regulation, redox poise, DNA-binding, NAD, NADH; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=39.10 E-value=14 Score=14.98 Aligned_cols=21 Identities=14% Similarity=0.237 Sum_probs=9.2
Q ss_pred HHHHHHHHHHCCCCCEEEEEC
Q ss_conf 999999986104786899970
Q gi|254780442|r 359 ISSAARQIAETLRLSAIFCYT 379 (480)
Q Consensus 359 Ia~aav~lA~~l~a~aIiv~T 379 (480)
-|..+++.-...+.++|.-||
T Consensus 157 ~AQ~vad~Lv~~GIk~IlNFa 177 (215)
T 2vt3_A 157 AAQSITDRLVALGIKGILNFT 177 (215)
T ss_dssp HHHHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEECC
T ss_conf 899999999980980897768
No 146
>1wsc_A Hypothetical protein ST0229; structural genomics, function unknown protein, unknown function; 2.45A {Sulfolobus tokodaii} SCOP: d.309.1.1
Probab=38.88 E-value=15 Score=14.72 Aligned_cols=54 Identities=19% Similarity=0.182 Sum_probs=41.1
Q ss_pred EECCHHHHHHHHHHHHHHHEEEEECCC-C-CHHCC---HHHHHHHHHHHHHHHHHCCCE
Q ss_conf 327856631178887533124752222-0-02158---767368999999998513983
Q gi|254780442|r 219 KIEKPRAIEYASEIIQLSDAVMVARGD-L-GVEMA---LELIPGIQKKLIRIARQLGKP 272 (480)
Q Consensus 219 KIE~~~al~nl~eI~~~sDgimiaRGD-L-g~e~~---~e~vp~~Qk~ii~~~~~~~kp 272 (480)
+++.....+-+..|.-.-||++|.+|+ - |+-+| .|..+..|..+-..|.++|-|
T Consensus 125 ~i~~~~~~el~~~l~~G~~Glii~~g~~~~~~fLPqVa~e~~wd~e~fL~~l~~KAGl~ 183 (230)
T 1wsc_A 125 EIDVENRWELPKKIKVGEDGLIVEYGILYSGLLLPQVPMEYCWDEETFLAETCIKAGLE 183 (230)
T ss_dssp ECCCSCGGGGGGGCCTTTCEEEEEETTTEEEEECTHHHHHTTCCHHHHHHHHHHHHTSC
T ss_pred ECCCCCHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 78887855757745677656999889966487898876656989999999999966999
No 147
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=38.77 E-value=15 Score=14.71 Aligned_cols=226 Identities=15% Similarity=0.170 Sum_probs=105.7
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCC-----EE--E-C-CC
Q ss_conf 99999999739978999888889899999999999999974992799998789867886548981-----89--6-5-89
Q gi|254780442|r 20 EDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELRSRRPIGILIDLQGPKFRVGKFANSK-----VD--L-T-EG 90 (480)
Q Consensus 20 ~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkiR~g~~~~~~-----i~--l-~-~G 90 (480)
.+.|+.-.+.|.-|.=+|+. +.|..+..+ +++++.+.|+ |+.=.+|- ++ +.+-. +. . + ..
T Consensus 6 k~ll~~A~~~~yaV~AfNv~--~~e~~~avi----~AAe~~~sPv-Ilq~s~~~-~~---~~g~~~~~~~~~~~a~~~~~ 74 (307)
T 3n9r_A 6 NEILLKAHKEGYGVGAFNFV--NFEMLNAIF----EAGNEENSPL-FIQASEGA-IK---YMGIDMAVGMVKIMCERYPH 74 (307)
T ss_dssp HHHHHHHHHHTCCEEEEECS--SHHHHHHHH----HHHHHHTCCE-EEEEEHHH-HH---HHCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHCCEEEEEEEEC--CHHHHHHHH----HHHHHHCCCE-EEECCHHH-HH---HCCHHHHHHHHHHHHHHCCC
T ss_conf 99999999889379987679--999999999----9999979998-99848768-75---67989999999999975699
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCHHHCCCC-CEEEEECCCEEEC--------CCC-CCCCEEEEEECCCCEEECCCCCC
Q ss_conf 9999953245564442212664422211336-5267406842210--------234-45411245513880871145644
Q gi|254780442|r 91 QIFTLDNKDSLGSSDRVMLPHPEIFASIKIG-DRLLIDDGRVKLC--------VQE-KGIGFIKCKVIAGISIADRKGIS 160 (480)
Q Consensus 91 ~~v~l~~~~~~~~~~~i~i~y~~l~~~ik~G-d~I~idDG~i~l~--------V~~-~~~~~i~c~V~~gG~l~s~Kgvn 160 (480)
--|.+..|.. -++..+-+.++.| +.|.+|-..+.|+ |.+ ...-.+..+.+-|..-+...+.+
T Consensus 75 Vpv~lHLDH~--------~~~e~i~~ai~~GftSVMiDgS~lp~eeNi~~T~~vve~Ah~~gv~VEaElG~igg~e~~~~ 146 (307)
T 3n9r_A 75 IPVALHLDHG--------TTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNIS 146 (307)
T ss_dssp SCEEEEEEEE--------CSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC-----
T ss_pred CEEEEECCCC--------CCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC
T ss_conf 8089971787--------99999999997199868860998999999999999999982539828987412157678766
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEE
Q ss_conf 67854455567655677899887348853250585577347999998620034335553278566311788875331247
Q gi|254780442|r 161 FPDTFLTTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVM 240 (480)
Q Consensus 161 ip~~~i~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgim 240 (480)
..... ..+|+- .+..+|. ++-++|++|+||=...- .. =.|=+-..-++-|++|-+..+-=+
T Consensus 147 ~~~~~---~~~T~P-eea~~Fv-~~TgvD~LAvaiGn~HG-------------~y-k~~~~p~ld~~~l~~I~~~~~vPL 207 (307)
T 3n9r_A 147 VDEKD---AVLVNP-KEAEQFV-KESQVDYLAPAIGTSHG-------------AF-KFKGEPKLDFERLQEVKRLTNIPL 207 (307)
T ss_dssp --------CCSCCH-HHHHHHH-HHHCCSEEEECSSCCSS-------------SB-CCSSSCCCCHHHHHHHHHHHCSCE
T ss_pred CCCCC---CCCCCH-HHHHHHH-HHHCCCEECHHHCCCCC-------------CC-CCCCCCCCCHHHHHHHHHHCCCCE
T ss_conf 55532---124798-9999998-71088734221122336-------------77-788987768999999885058865
Q ss_pred EECCCCCHHCCHHHHHHHH-------------HHHHHHHHHCCCEEE-EEHHHHHHHHH
Q ss_conf 5222200215876736899-------------999999851398399-80576788882
Q gi|254780442|r 241 VARGDLGVEMALELIPGIQ-------------KKLIRIARQLGKPVV-IATQMLESMVT 285 (480)
Q Consensus 241 iaRGDLg~e~~~e~vp~~Q-------------k~ii~~~~~~~kpvi-vATq~leSM~~ 285 (480)
+--|-=| +|-+.+.... ..-+++|.++|---| +.|.+...+..
T Consensus 208 VlHG~S~--v~d~~~~~~~~~~~~~HG~sG~p~e~i~~ai~~Gi~KiNi~T~l~~a~~~ 264 (307)
T 3n9r_A 208 VLHGASA--IPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLRIAFIA 264 (307)
T ss_dssp EESSCCC--CCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHH
T ss_pred ECCCCCC--CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHH
T ss_conf 5478876--61777776401233467888999999999997794699978799999999
No 148
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=38.74 E-value=15 Score=14.70 Aligned_cols=139 Identities=12% Similarity=0.071 Sum_probs=71.1
Q ss_pred HHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCH--HCCHHHH
Q ss_conf 89988734885325058557734799999862003433555327856631178887533124752222002--1587673
Q gi|254780442|r 178 DLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGV--EMALELI 255 (480)
Q Consensus 178 di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~--e~~~e~v 255 (480)
.++...+. ++|+|.+-+- +..|+..+-+.+.+.++++--=+.-..-++.++..++..|.|++==-+-|- +--.+..
T Consensus 76 ~i~~~~~~-g~d~I~~H~E-~~~~~~~~i~~i~~~g~~~Glal~p~T~~~~~~~~l~~vd~vlvM~V~pG~~Gq~f~~~~ 153 (220)
T 2fli_A 76 YVEAFAQA-GADIMTIHTE-STRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPEC 153 (220)
T ss_dssp GHHHHHHH-TCSEEEEEGG-GCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGG
T ss_pred HHHHHHHC-CCCEEEECHH-HHCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCHHH
T ss_conf 89999865-9978995323-320889999999876986999964876403666167550879898875664665554057
Q ss_pred HHHHHHHHHHHHHCC--CEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 689999999985139--8399805767888828898403477899998519968998144435446589999999988
Q gi|254780442|r 256 PGIQKKLIRIARQLG--KPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVA 331 (480)
Q Consensus 256 p~~Qk~ii~~~~~~~--kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~ 331 (480)
..--+++-+...+.+ ..+-+-.-+ +. ..+...+.-|+|.+....---....|.++++.|+..+
T Consensus 154 ~~ki~~l~~~~~~~~~~~~I~vDGGi----------n~---~~i~~l~~~Gad~~V~GS~if~~~d~~~~i~~Lr~~l 218 (220)
T 2fli_A 154 LEKVATVAKWRDEKGLSFDIEVDGGV----------DN---KTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTAL 218 (220)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEESSC----------CT---TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCC----------CH---HHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHHH
T ss_conf 89999999999752997069984677----------88---8799999879999997858868999999999999974
No 149
>3cvj_A Putative phosphoheptose isomerase; NP_244191.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=38.16 E-value=15 Score=14.64 Aligned_cols=37 Identities=19% Similarity=0.301 Sum_probs=27.9
Q ss_pred CCCCEEEEECCCHHHHHHH-----HHHCCCCCEEEEECCHHHH
Q ss_conf 4786899970883799999-----8418888699992998999
Q gi|254780442|r 370 LRLSAIFCYTASGATGLRA-----ARERPKLEIIALSPMIQTA 407 (480)
Q Consensus 370 l~a~aIiv~T~sG~tA~~i-----S~~RP~~pIiaiT~~~~t~ 407 (480)
-.-+.+|++|.||+|+..+ +|-| .++++++|.++...
T Consensus 107 ~~~DvvI~iS~SG~t~~vi~a~~~AK~~-G~~vIaIT~~~~S~ 148 (243)
T 3cvj_A 107 TNKDVIMIISNSGRNTVPVEMAIESRNI-GAKVIAMTSMKHSQ 148 (243)
T ss_dssp CTTCEEEEECSSCCSHHHHHHHHHHHHH-TCEEEEEECHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHC-CCEEEEEECCCCCC
T ss_conf 9999999977899999999999999987-99499980887675
No 150
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infectious disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=37.58 E-value=16 Score=14.58 Aligned_cols=103 Identities=14% Similarity=0.187 Sum_probs=56.7
Q ss_pred HHHHHHH-HHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCC----CEEEE----------EECCHHHHHHHHHHHHHHH
Q ss_conf 5567789-9887348853250585577347999998620034----33555----------3278566311788875331
Q gi|254780442|r 173 QKDREDL-HAALQTCEVDWVALSFIQSADDLLEIRKIISQNK----IGLMS----------KIEKPRAIEYASEIIQLSD 237 (480)
Q Consensus 173 ekD~~di-~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~----~~Iia----------KIE~~~al~nl~eI~~~sD 237 (480)
++|.+.+ +.| +..+|..+-+.-+ +.+|-+.+.++..+.. .+|++ .......++.+...+...+
T Consensus 51 ~~Dl~~Vl~rA-~~~gV~~ii~~g~-~~~~~~~a~~La~~~~~~~~~~i~~t~GiHP~~a~e~~~~~~l~~l~~l~~~~~ 128 (325)
T 3ipw_A 51 EEDIDVVLQRA-ERNGLSHIIITSG-CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNI 128 (325)
T ss_dssp CCCHHHHHHHH-HHTTEEEEEECCC-SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTG
T ss_pred CCCHHHHHHHH-HHCCCCEEEEECC-CHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCCCHHHHHHHHHHHCC
T ss_conf 02699999999-9869998999239-999999999999867775566279997158270000343128999999987446
Q ss_pred EEEEECCCCCHHCCH-HH-HHHHHHH----HHHHH-HHCCCEEEEEH
Q ss_conf 247522220021587-67-3689999----99998-51398399805
Q gi|254780442|r 238 AVMVARGDLGVEMAL-EL-IPGIQKK----LIRIA-RQLGKPVVIAT 277 (480)
Q Consensus 238 gimiaRGDLg~e~~~-e~-vp~~Qk~----ii~~~-~~~~kpvivAT 277 (480)
.-.+|-|..|.+..- .. -...|++ .+..+ ...++|+++=+
T Consensus 129 ~~vvAIGEiGLDy~~~~~~~~e~Q~~~f~~ql~la~k~~~lPl~lH~ 175 (325)
T 3ipw_A 129 DKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHC 175 (325)
T ss_dssp GGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEE
T ss_pred CCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEC
T ss_conf 87689986531787566870999999999987889997199703141
No 151
>2qde_A Mandelate racemase/muconate lactonizing enzyme family protein; PSI-II, NYSGXRC, enolase, structural genomics, protein structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=37.49 E-value=16 Score=14.57 Aligned_cols=85 Identities=18% Similarity=0.209 Sum_probs=46.7
Q ss_pred HHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH--HHEEEEECCCCCHHCCHHHHHHHH
Q ss_conf 873488532505855773479999986200343355532785663117888753--312475222200215876736899
Q gi|254780442|r 182 ALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQL--SDAVMVARGDLGVEMALELIPGIQ 259 (480)
Q Consensus 182 a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~--sDgimiaRGDLg~e~~~e~vp~~Q 259 (480)
.++..++.|+=-.+ .++|...++++-....+. ||-=|+......+..+++. .|.+.+ |++.-=++...
T Consensus 211 ~l~~~~~~wiEeP~--~~~d~~~l~~l~~~~~ip-ia~dEs~~~~~d~~~~i~~~~~d~v~~---d~~~~GGit~~---- 280 (397)
T 2qde_A 211 ALEKYNLSKIEQPL--PAWDLDGMARLRGKVATP-IYADESAQELHDLLAIINKGAADGLMI---KTQKAGGLLKA---- 280 (397)
T ss_dssp HHGGGCCSCEECCS--CTTCHHHHHHHHTTCSSC-EEESTTCCSHHHHHHHHHHTCCSEEEE---CHHHHTSHHHH----
T ss_pred HHHHCCCCCCCCCC--CCCCHHHHHHHHHCCCCC-CCCCEEEEEHHHHHHHHHCCCCCEEEC---CCCCCCHHHHH----
T ss_conf 57761980332466--743446666654214788-506610020465999986578672421---76527829999----
Q ss_pred HHHHHHHHHCCCEEEEE
Q ss_conf 99999985139839980
Q gi|254780442|r 260 KKLIRIARQLGKPVVIA 276 (480)
Q Consensus 260 k~ii~~~~~~~kpvivA 276 (480)
++++..|.++|+++.+-
T Consensus 281 ~~i~~~A~~~gi~~~~~ 297 (397)
T 2qde_A 281 QRWLTLARLANLPVICG 297 (397)
T ss_dssp HHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHCCCCEEEC
T ss_conf 99999999869988865
No 152
>2dgd_A 223AA long hypothetical arylmalonate decarboxylase; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=37.33 E-value=16 Score=14.55 Aligned_cols=38 Identities=26% Similarity=0.270 Sum_probs=25.0
Q ss_pred HHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHH
Q ss_conf 331247522220021587673689999999985139839980576788
Q gi|254780442|r 235 LSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQMLES 282 (480)
Q Consensus 235 ~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leS 282 (480)
.+|+|++.-..|.. ++-++.++ .+.||||+.+.|.+-+
T Consensus 171 ~adav~iscT~l~t---~~~i~~lE-------~~lg~PVisSNqa~~W 208 (223)
T 2dgd_A 171 KADAVYIACTALST---YEAVQYLH-------EDLDMPVVSENAAAMW 208 (223)
T ss_dssp TSSEEEECCTTSCC---TTHHHHHH-------HHHTSCEEEHHHHHHH
T ss_pred CCCEEEEECCCCCH---HHHHHHHH-------HHHCCCEEEHHHHHHH
T ss_conf 78789994158638---88999999-------9989899978999999
No 153
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=37.30 E-value=16 Score=14.55 Aligned_cols=47 Identities=21% Similarity=0.317 Sum_probs=29.1
Q ss_pred HHHHHHHHHCCCCEEEEECC------CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 99999999739978999888------889899999999999999974992799998789
Q gi|254780442|r 20 EDVINRLHEEGTDVFRINMS------HTSHDKMCELIKKIRAVELRSRRPIGILIDLQG 72 (480)
Q Consensus 20 ~e~i~~l~~aG~nv~RiN~S------Hg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~G 72 (480)
.+.++-|-++|+|..||-.- +.+.+...+.+++.|+ .| +-+++|+-+
T Consensus 30 ~d~~~~lk~~G~N~VRi~vW~~P~~g~~~~~~~~~~~~~a~~----~G--m~v~ldlH~ 82 (334)
T 1fob_A 30 QALETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRVKA----AG--MSLYLDLHL 82 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEECSCCTTCTTCHHHHHHHHHHHHH----TT--CEEEEEECC
T ss_pred CCHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHH----CC--CEEEEECCC
T ss_conf 459999998499979985412798886799999999999998----89--989996477
No 154
>3dkp_A Probable ATP-dependent RNA helicase DDX52; DEAD, ADP, structural genomics, structural genomics consortium, SGC, rRNA, ATP-binding, hydrolase; HET: ADP; 2.10A {Homo sapiens}
Probab=36.96 E-value=16 Score=14.51 Aligned_cols=129 Identities=15% Similarity=0.199 Sum_probs=54.6
Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 88984034778999985199689981444354465899999999887630101244444432038788887899999999
Q gi|254780442|r 286 SPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQ 365 (480)
Q Consensus 286 ~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~ 365 (480)
.|.|--+++-. +++.|-| +++.+.|..||--.-..-.+..+-....+. ...-..-|......-+..-...
T Consensus 51 ~ptpiQ~~ai~---~il~g~d-viv~apTGsGKT~~~~~~il~~~~~~~~~~------~~~lil~Ptr~La~q~~~~~~~ 120 (245)
T 3dkp_A 51 MPTPIQMQAIP---VMLHGRE-LLASAPTGSGKTLAFSIPILMQLKQPANKG------FRALIISPTRELASQIHRELIK 120 (245)
T ss_dssp SCCHHHHHHHH---HHHTTCC-EEEECCTTSCHHHHHHHHHHHHHCSCCSSS------CCEEEECSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHH---HHHCCCC-EEEECCCCCCHHHHHHHHHHHHHHHCCCCC------CEEEEECCCHHHHHHHHHHHEE
T ss_conf 99999999999---9977998-899879999775899889887554203788------4699858808986432012000
Q ss_pred HHHCCCCCEEEEECCCHHHHHHHHHHC-CCCCEEEEECCHHHHHHHH-----H-HCCCEEEEECCCCC
Q ss_conf 861047868999708837999998418-8886999929989998766-----6-53937999368799
Q gi|254780442|r 366 IAETLRLSAIFCYTASGATGLRAARER-PKLEIIALSPMIQTARRLA-----L-VWGIHCVVTEDASD 426 (480)
Q Consensus 366 lA~~l~a~aIiv~T~sG~tA~~iS~~R-P~~pIiaiT~~~~t~r~l~-----L-~~GV~p~~~~~~~~ 426 (480)
++...+.+...+++ .+.........+ ..+-|+..||..- .+.+. + +..+.-+.+++.+.
T Consensus 121 ~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~Ili~Tp~~l-~~ll~~~~~~~~l~~l~~lVvDEad~ 186 (245)
T 3dkp_A 121 ISEGTGFRIHMIHK-AAVAAKKFGPKSSKKFDILVTTPNRL-IYLLKQDPPGIDLASVEWLVVDESDK 186 (245)
T ss_dssp HTTTSCCCEECCCH-HHHHHTTTSTTSCCCCCEEEECHHHH-HHHHHSSSCSCCCTTCCEEEESSHHH
T ss_pred CCCCCCCCCCCCCC-CCCCCCCCHHHHCCCCCEEECCHHHH-HHHHHCCCCCCCCCCEEEEEECCHHH
T ss_conf 12234532000125-54333220011047872897085999-99996786553114515999543887
No 155
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X*
Probab=36.91 E-value=16 Score=14.50 Aligned_cols=59 Identities=12% Similarity=0.254 Sum_probs=28.6
Q ss_pred EEEEEECCHHHHHHHHHHHHHHHE-EEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCC-EEEEEHHHHHH
Q ss_conf 355532785663117888753312-475222200215876736899999999851398-39980576788
Q gi|254780442|r 215 GLMSKIEKPRAIEYASEIIQLSDA-VMVARGDLGVEMALELIPGIQKKLIRIARQLGK-PVVIATQMLES 282 (480)
Q Consensus 215 ~IiaKIE~~~al~nl~eI~~~sDg-imiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~k-pvivATq~leS 282 (480)
++-..++...-+.+-+..+...+- |-|.+..=..++ -..++.|++.|. |++--|+..+|
T Consensus 319 ~i~v~v~~asef~~~~~~~~~~~lvI~iSQSGeT~dt---------i~Al~~ak~~G~~~ti~itn~~~S 379 (608)
T 2bpl_A 319 GIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADT---------LAGLRLSKELGYLGSLAICNVPGS 379 (608)
T ss_dssp CCCEEEEEHHHHTTSCCCCCTTEEEEEEESSSCCHHH---------HHHHHHHHHTTCSEEEEEESSTTC
T ss_pred CCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHH---------HHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 9974998561010137778998589997178995789---------999999997299828999537898
No 156
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid, csgid, Mg-bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} PDB: 3ieb_A*
Probab=36.73 E-value=16 Score=14.48 Aligned_cols=26 Identities=8% Similarity=-0.147 Sum_probs=11.7
Q ss_pred HHHHHCCCCEEEECCCCCCCCCHHHH
Q ss_conf 99985199689981444354465899
Q gi|254780442|r 298 ATAVFEEADAIMLSAETASGSYPVDA 323 (480)
Q Consensus 298 anav~dG~D~imLs~ETa~G~yP~~~ 323 (480)
..++..|+|.+....-=.-.+.|.++
T Consensus 181 ~~~~~~GaD~iVvGraI~~a~dp~~a 206 (218)
T 3jr2_A 181 YLFEGIKTKTFIAGRALAGAEGQQTA 206 (218)
T ss_dssp GGGTTSCEEEEEESGGGSHHHHHHHH
T ss_pred HHHHHCCCCEEEECHHHCCCCCHHHH
T ss_conf 99998499999988366079999999
No 157
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isomerase; structural genomics, PSI, MCSG, protein structure initiative; 1.80A {Escherichia coli K12}
Probab=36.65 E-value=16 Score=14.60 Aligned_cols=53 Identities=15% Similarity=0.175 Sum_probs=23.3
Q ss_pred CCCCCEEEEECCHHHHHHHHHHCCCEEEEECCCCCHH--HHH-------HHHHHHHHHCCCCCCCCE
Q ss_conf 8888699992998999876665393799936879999--999-------999999998888778877
Q gi|254780442|r 392 RPKLEIIALSPMIQTARRLALVWGIHCVVTEDASDSD--DMV-------NRACRIVVEQGFGKPGDR 449 (480)
Q Consensus 392 RP~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~~~~~--~~i-------~~a~~~l~~~g~i~~GD~ 449 (480)
.....+++++..... ....+...++.+.....| ..+ -.|..++..+|+ ++...
T Consensus 303 ~~~~~vi~i~~~~~~----~~~~~~~~~~~~~~~~~e~~~~l~~vip~QllAy~~A~~~Gi-dPD~P 364 (384)
T 3c3j_A 303 NQAMRVIAIAAESSD----IVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGN-TPDTP 364 (384)
T ss_dssp TCSSEEEEEESSCCH----HHHTSSEEECCCCSCCCHHHHHHHHHHHHHHHHHHHHHHTTC-CTTCC
T ss_pred CCCCEEEEEECCCCC----CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCC
T ss_conf 489879999258841----003678489807988523888999999999999999998699-99999
No 158
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isomerase; NP_344614.1, structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=36.51 E-value=15 Score=14.75 Aligned_cols=10 Identities=10% Similarity=-0.173 Sum_probs=6.2
Q ss_pred HHHHHHHCCC
Q ss_conf 9999998888
Q gi|254780442|r 434 ACRIVVEQGF 443 (480)
Q Consensus 434 a~~~l~~~g~ 443 (480)
|..++..+|+
T Consensus 355 Ay~~A~~~G~ 364 (389)
T 3i0z_A 355 ALLTSLKVEN 364 (389)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHCCC
T ss_conf 9999998699
No 159
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile 630}
Probab=36.49 E-value=16 Score=14.46 Aligned_cols=16 Identities=6% Similarity=0.154 Sum_probs=8.3
Q ss_pred CHHHHHHHHHHCCCEE
Q ss_conf 9899987666539379
Q gi|254780442|r 403 MIQTARRLALVWGIHC 418 (480)
Q Consensus 403 ~~~t~r~l~L~~GV~p 418 (480)
-...+-++++.+|+.|
T Consensus 318 ~Qllay~~A~~~G~dp 333 (352)
T 3g68_A 318 IQLICGEIPTLRGVDP 333 (352)
T ss_dssp HHHHHHHSGGGGTCCT
T ss_pred HHHHHHHHHHHCCCCC
T ss_conf 9999999999819998
No 160
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=36.45 E-value=16 Score=14.45 Aligned_cols=13 Identities=8% Similarity=0.245 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 5567789988734
Q gi|254780442|r 173 QKDREDLHAALQT 185 (480)
Q Consensus 173 ekD~~di~~a~~~ 185 (480)
||++.+|+--+++
T Consensus 18 EkpI~eLe~kI~e 30 (327)
T 2f9i_A 18 EKPLFEIRNKIES 30 (327)
T ss_dssp GHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHH
T ss_conf 2579999999999
No 161
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=36.42 E-value=16 Score=14.45 Aligned_cols=75 Identities=12% Similarity=0.142 Sum_probs=45.6
Q ss_pred HHHHHCCCCCEEEEECC----CH-HHHHHHHHHCCCCCEEEEECCHH-HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 99861047868999708----83-79999984188886999929989-99876665393799936879999999999999
Q gi|254780442|r 364 RQIAETLRLSAIFCYTA----SG-ATGLRAARERPKLEIIALSPMIQ-TARRLALVWGIHCVVTEDASDSDDMVNRACRI 437 (480)
Q Consensus 364 v~lA~~l~a~aIiv~T~----sG-~tA~~iS~~RP~~pIiaiT~~~~-t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~ 437 (480)
.++...-..+.|++--. +| ...+.+-...|..||+.+|.+.. -.+.-.+-.|+.-++.+++.+.+...+.....
T Consensus 44 l~~l~~~~~dlvi~D~~mP~~dG~~~~~~ir~~~~~~piI~lt~~~~~~~~~~a~~~Ga~~~l~KP~~~~~~L~~~i~~~ 123 (130)
T 3eod_A 44 LELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFAC 123 (130)
T ss_dssp HHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEESCC---CHHHHHHHHH
T ss_pred HHHHHCCCCCEEHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 99985289887457421799989999999996098998999989999999999998699889979999799999999998
Q ss_pred H
Q ss_conf 9
Q gi|254780442|r 438 V 438 (480)
Q Consensus 438 l 438 (480)
+
T Consensus 124 L 124 (130)
T 3eod_A 124 L 124 (130)
T ss_dssp H
T ss_pred H
T ss_conf 5
No 162
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase, PHI, structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=36.29 E-value=17 Score=14.44 Aligned_cols=33 Identities=21% Similarity=0.157 Sum_probs=22.1
Q ss_pred CEEEEECCCHHHHHHH-----HHHCCCCCEEEEECCHHH
Q ss_conf 6899970883799999-----841888869999299899
Q gi|254780442|r 373 SAIFCYTASGATGLRA-----ARERPKLEIIALSPMIQT 406 (480)
Q Consensus 373 ~aIiv~T~sG~tA~~i-----S~~RP~~pIiaiT~~~~t 406 (480)
+.++++|.||+|...+ ++.| .+|++++|.+...
T Consensus 84 Dv~i~iS~sG~t~~~i~~~~~ak~~-g~~vI~IT~~~~~ 121 (180)
T 1jeo_A 84 DLLILISGSGRTESVLTVAKKAKNI-NNNIIAIVCECGN 121 (180)
T ss_dssp CEEEEEESSSCCHHHHHHHHHHHTT-CSCEEEEESSCCG
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHC-CCCEEEEECCCCC
T ss_conf 9899975999808999999999975-9979999699997
No 163
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=36.27 E-value=17 Score=14.43 Aligned_cols=58 Identities=17% Similarity=0.278 Sum_probs=36.9
Q ss_pred ECCCCEEEEECC--CCCCCC---CCCCCCCCCCH--HHCCCCCEEEEE--CCCEEECCCCCCCCEEE
Q ss_conf 658999999532--455644---42212664422--211336526740--68422102344541124
Q gi|254780442|r 87 LTEGQIFTLDNK--DSLGSS---DRVMLPHPEIF--ASIKIGDRLLID--DGRVKLCVQEKGIGFIK 144 (480)
Q Consensus 87 l~~G~~v~l~~~--~~~~~~---~~i~i~y~~l~--~~ik~Gd~I~id--DG~i~l~V~~~~~~~i~ 144 (480)
++.|++.+|+.. +.+|.. ....++-..|. ..+++|..+..+ +|...++|++++++.++
T Consensus 52 m~~Ge~~~v~l~peeAyG~~d~~lV~~vp~~~f~~~~~l~~G~~~~~~~~~g~~~~~V~~v~~~~V~ 118 (171)
T 2k8i_A 52 HEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV 118 (171)
T ss_dssp CCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEE
T ss_pred CCCCCEEEEEECHHHCCCCCCHHHEEECCHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCEEE
T ss_conf 7699506999774890788898995540265436666767860999845899378999997189999
No 164
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=35.72 E-value=12 Score=15.49 Aligned_cols=58 Identities=12% Similarity=0.103 Sum_probs=35.3
Q ss_pred EEEECCHHHHHHHHHHHHHHHEEEEECCCCC---HHCCHHHHHHHHHHHHHHHHHCCCEEE-EEHHHHH
Q ss_conf 5532785663117888753312475222200---215876736899999999851398399-8057678
Q gi|254780442|r 217 MSKIEKPRAIEYASEIIQLSDAVMVARGDLG---VEMALELIPGIQKKLIRIARQLGKPVV-IATQMLE 281 (480)
Q Consensus 217 iaKIE~~~al~nl~eI~~~sDgimiaRGDLg---~e~~~e~vp~~Qk~ii~~~~~~~kpvi-vATq~le 281 (480)
+..|.| |++.||+++ .| +.+|+|- .--+.-|--.....+...|...|+||. ...+|-.
T Consensus 183 ~~gi~t--g~~~ld~~~---~G--~~~g~l~vi~a~pg~GKT~~~~~~a~~~~~~~g~~Vl~~SlEm~~ 244 (454)
T 2r6a_A 183 ITGIPT--GFTELDRMT---SG--FQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSA 244 (454)
T ss_dssp CCSBCC--SCHHHHHHH---SS--BCTTCEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCH
T ss_pred CCCCCC--CCHHHHHHH---CC--CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH
T ss_conf 646777--927899884---58--888877999956776532999989975766259807998078999
No 165
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=35.66 E-value=16 Score=14.46 Aligned_cols=24 Identities=29% Similarity=0.481 Sum_probs=14.6
Q ss_pred CHHHCCCCCEEEEECCCEEECCCC
Q ss_conf 222113365267406842210234
Q gi|254780442|r 114 IFASIKIGDRLLIDDGRVKLCVQE 137 (480)
Q Consensus 114 l~~~ik~Gd~I~idDG~i~l~V~~ 137 (480)
-.+.+++||.|.+.+..+..+|++
T Consensus 30 k~~~ik~GD~I~F~n~~l~~~V~~ 53 (109)
T 2z0t_A 30 KRRQIKPGDIIIFEGGKLKVKVKG 53 (109)
T ss_dssp TGGGCCTTCEEEEGGGTEEEEEEE
T ss_pred HHHHCCCCCEEEEECCEEEEEEEE
T ss_conf 687289999999968908999989
No 166
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii}
Probab=35.62 E-value=17 Score=14.36 Aligned_cols=54 Identities=13% Similarity=0.245 Sum_probs=34.3
Q ss_pred CCHHHHHHHHHCCCCEEEEECCCC-------CH-HHHHHHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf 799999999973997899988888-------98-999999999999999749927999987898
Q gi|254780442|r 18 FSEDVINRLHEEGTDVFRINMSHT-------SH-DKMCELIKKIRAVELRSRRPIGILIDLQGP 73 (480)
Q Consensus 18 ~~~e~i~~l~~aG~nv~RiN~SHg-------~~-e~~~~~i~~ir~~~~~~~~~i~Il~Dl~Gp 73 (480)
-+++.++.|.++|.|.+||-+++. +. +...+.++.+=..+.+.| +-+++|+-+.
T Consensus 53 ~t~~~i~~ik~~GfN~VRiPv~w~~~~~~~~~~~~~~l~~l~~vV~~a~~~G--l~VIlD~H~~ 114 (353)
T 3l55_A 53 TTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAG--LYAIVNVHHD 114 (353)
T ss_dssp CCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHT--CEEEEECCTT
T ss_pred CCHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEECCC
T ss_conf 6699999999869986995365998279999719899999999999999779--9899973567
No 167
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis}
Probab=35.47 E-value=17 Score=14.35 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=27.2
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 899998519968998144435446589999999988763
Q gi|254780442|r 296 DVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASSA 334 (480)
Q Consensus 296 Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~ 334 (480)
++..+..-|+|+|-+.+.-.....|.++++.+.+...+.
T Consensus 177 ni~~~~~~Ga~gvav~s~I~~~~dp~~~~~~~~~~l~e~ 215 (221)
T 1yad_A 177 RLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKEM 215 (221)
T ss_dssp GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 999999809988998499977999999999999999999
No 168
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=35.30 E-value=17 Score=14.33 Aligned_cols=201 Identities=14% Similarity=0.076 Sum_probs=105.4
Q ss_pred CCCCHHHHHHHHHHHHCCCCCEECC-CCCCCCHHHHHHHHHHHCC-CCEEEE-EECCHHHHHHHHHHHHH-H-H--EEEE
Q ss_conf 5676556778998873488532505-8557734799999862003-433555-32785663117888753-3-1--2475
Q gi|254780442|r 169 QALTQKDREDLHAALQTCEVDWVAL-SFIQSADDLLEIRKIISQN-KIGLMS-KIEKPRAIEYASEIIQL-S-D--AVMV 241 (480)
Q Consensus 169 ~~ltekD~~di~~a~~~~~vD~ial-SfVr~~~di~~~r~~l~~~-~~~Iia-KIE~~~al~nl~eI~~~-s-D--gimi 241 (480)
..++..|+..+--++...++|.|-+ ||+.+..|....+...... ...... +.-.........+-... . + .+.+
T Consensus 22 ~~~s~~~k~~i~~~L~~aGv~~IEvg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (293)
T 3ewb_X 22 VNFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFL 101 (293)
T ss_dssp -CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCCSSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE
T ss_conf 99899999999999998396999996687886778899999865121310120003536479999998755997799997
Q ss_pred ECCCCC----HHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHH-CCCCEEEECCCCCC
Q ss_conf 222200----2158767368999999998513983998057678888288984034778999985-19968998144435
Q gi|254780442|r 242 ARGDLG----VEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVF-EEADAIMLSAETAS 316 (480)
Q Consensus 242 aRGDLg----~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~-dG~D~imLs~ETa~ 316 (480)
+..+.. .-...++.....+..+..+...+..+.... ....+.+..++.+.+..+. .|+|.|.|. -|+=
T Consensus 102 ~~s~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~d~i~l~-DT~G 174 (293)
T 3ewb_X 102 ATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSP------EDATRSDRAFLIEAVQTAIDAGATVINIP-DTVG 174 (293)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEE------ETGGGSCHHHHHHHHHHHHHTTCCEEEEE-CSSS
T ss_pred EECHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEC------CCCCCCCHHHHHHHHHHHHHCCCCEEEEC-CCCC
T ss_conf 3079988887516599999999999988750776799811------33667634568999999998699799833-5223
Q ss_pred CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHH
Q ss_conf 44658999999998876301012444444320387888878999999998610478689997088379
Q gi|254780442|r 317 GSYPVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGAT 384 (480)
Q Consensus 317 G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~t 384 (480)
.-+|.++-+....+.......... . -......+. .+|.+-...|...+++ +|=-|-.|--
T Consensus 175 ~~~P~~v~~~i~~~~~~l~~~~~i---~--l~~H~Hn~~--GlA~aN~laA~~~Gv~-~iD~si~GlG 234 (293)
T 3ewb_X 175 YTNPTEFGQLFQDLRREIKQFDDI---I--FASHCHDDL--GMATANALAAIENGAR-RVEGTINGIG 234 (293)
T ss_dssp CCCHHHHHHHHHHHHHHCTTGGGS---E--EEEECBCTT--SCHHHHHHHHHHTTCC-EEEEBGGGCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCC---E--EEECCCCCH--HHHHHHHHHHHHHCCC-EEEEECCCCC
T ss_conf 358378999999999972320270---5--776168844--3699999999983988-8955124446
No 169
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, JCSG, PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=35.30 E-value=12 Score=15.41 Aligned_cols=25 Identities=0% Similarity=0.001 Sum_probs=14.4
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9988888989999999999999997
Q gi|254780442|r 35 RINMSHTSHDKMCELIKKIRAVELR 59 (480)
Q Consensus 35 RiN~SHg~~e~~~~~i~~ir~~~~~ 59 (480)
-.|+.|.|.+|..+--+.+|+..+.
T Consensus 9 ~~~~~~~tlkEI~eQp~~l~~~~~~ 33 (342)
T 1j5x_A 9 HHHHMSKTLKEITDQKNELKKFFEN 33 (342)
T ss_dssp -----CHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5888999999999799999999998
No 170
>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, allosteric, evolution; 2.90A {Lactococcus lactis} SCOP: c.94.1.1 PDB: 1z7n_E*
Probab=35.19 E-value=9.7 Score=16.16 Aligned_cols=26 Identities=15% Similarity=0.141 Sum_probs=20.4
Q ss_pred HHHHHHHHCCC-CCEEEEECCCHHHHH
Q ss_conf 99999861047-868999708837999
Q gi|254780442|r 361 SAARQIAETLR-LSAIFCYTASGATGL 386 (480)
Q Consensus 361 ~aav~lA~~l~-a~aIiv~T~sG~tA~ 386 (480)
.+++++|-.++ |++||=.|+||.|.+
T Consensus 138 ~GsvE~aP~~G~AD~IvDivsTG~TLk 164 (208)
T 1z7m_E 138 EGSVELGPVVGLADAIVDIVETGNTLS 164 (208)
T ss_dssp SSCTTHHHHTTSCSEEEEEESSSHHHH
T ss_pred CCCCCCCCCCCCEEEEEEECCCHHHHH
T ss_conf 777767678782028888617888999
No 171
>1t3o_A Carbon storage regulator; CSRA, CSRB, CSRC, mostly beta strands, RNA binding protein, beta sheet surface; NMR {Bacillus subtilis}
Probab=35.10 E-value=17 Score=14.39 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=22.9
Q ss_pred CHHHCCCCCEEEEECCCEEECCCCCCCCEEEEE
Q ss_conf 222113365267406842210234454112455
Q gi|254780442|r 114 IFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCK 146 (480)
Q Consensus 114 l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~ 146 (480)
|.-.-|+|..|.|+|+ |..+|.++.++.++-=
T Consensus 23 LVLtRK~GEsI~Igdd-I~I~Vl~i~~~~VkLG 54 (95)
T 1t3o_A 23 LVLSRKINEAIQIGAD-IEVKVIAVEGDQVKLG 54 (95)
T ss_dssp EEEECTTCCCEEETTT-EEECCCEECSSCEEEE
T ss_pred EEEECCCCCEEEECCC-EEEEEEEEECCEEEEE
T ss_conf 9995427998996999-8999999809989999
No 172
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=34.89 E-value=17 Score=14.28 Aligned_cols=199 Identities=14% Similarity=0.134 Sum_probs=107.3
Q ss_pred CCCHHHHHHHHHHHHCCCCCEECC-CCCCCCHHHHHHHHHHHCCC-CEEEEEECCHHH-HHHHHHHHHHHH--EEE--EE
Q ss_conf 676556778998873488532505-85577347999998620034-335553278566-311788875331--247--52
Q gi|254780442|r 170 ALTQKDREDLHAALQTCEVDWVAL-SFIQSADDLLEIRKIISQNK-IGLMSKIEKPRA-IEYASEIIQLSD--AVM--VA 242 (480)
Q Consensus 170 ~ltekD~~di~~a~~~~~vD~ial-SfVr~~~di~~~r~~l~~~~-~~IiaKIE~~~a-l~nl~eI~~~sD--gim--ia 242 (480)
.++..++..+--++...++|+|-+ ||+.++.|...++....... ..+.+......+ .+...+.+..+. .+. +.
T Consensus 24 ~~~~e~k~~i~~~L~~aGv~~IEvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 103 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKAVTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIG 103 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHCCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 88999999999999986979899978979989999999998631566166663012124677699997558867997257
Q ss_pred CCCC----CHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHH-CCCCEEEECCCCCCC
Q ss_conf 2220----02158767368999999998513983998057678888288984034778999985-199689981444354
Q gi|254780442|r 243 RGDL----GVEMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVF-EEADAIMLSAETASG 317 (480)
Q Consensus 243 RGDL----g~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~-dG~D~imLs~ETa~G 317 (480)
-.+. ......++.....+..+..+++.|..|-.... ...+.+..++.+++..+. -|+|.|.|. -|+=.
T Consensus 104 ~s~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~~~------~~~~~~~~~~~~~~~~~~~~G~d~I~l~-DT~G~ 176 (325)
T 3eeg_A 104 SSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE------DAGRADQAFLARMVEAVIEAGADVVNIP-DTTGY 176 (325)
T ss_dssp CSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE------TGGGSCHHHHHHHHHHHHHHTCSEEECC-BSSSC
T ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEC------CCCCCHHHHHHHHHHHHHHCCCCEEEEC-CCCCC
T ss_conf 6499999997358999999999988888751423677304------5542079999999999998599999954-66566
Q ss_pred CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHH
Q ss_conf 465899999999887630101244444432038788887899999999861047868999708837
Q gi|254780442|r 318 SYPVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGA 383 (480)
Q Consensus 318 ~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~ 383 (480)
-.|-++-+.+..+......... ..-......+. -+|.+....|...+++ +|=-|-.|-
T Consensus 177 ~~P~~v~~l~~~~~~~~~~~~~-----~~l~~H~Hn~~--Gla~aN~l~A~~aG~~-~iD~si~Gl 234 (325)
T 3eeg_A 177 MLPWQYGERIKYLMDNVSNIDK-----AILSAHCHNDL--GLATANSLAALQNGAR-QVECTINGI 234 (325)
T ss_dssp CCHHHHHHHHHHHHHHCSCGGG-----SEEEECBCCTT--SCHHHHHHHHHHHTCC-EEEEBGGGC
T ss_pred CCCCHHHHHHHHHHHHCCCCCC-----CEEEEEECCCC--CHHHHHHHHHHHCCCC-CCCCCCCCC
T ss_conf 1750678999999875169987-----33788854874--6199999999983978-105564444
No 173
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=34.27 E-value=18 Score=14.21 Aligned_cols=51 Identities=18% Similarity=0.307 Sum_probs=25.7
Q ss_pred CHHHHHHHHHCCCCEEEEECCC-------CCH--HHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 9999999997399789998888-------898--9999999999999997499279999878
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSH-------TSH--DKMCELIKKIRAVELRSRRPIGILIDLQ 71 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SH-------g~~--e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 71 (480)
+++-++.|...|.|..||-+.+ +.. +...+.++.+=+.+.+.| +.+++|+-
T Consensus 75 te~D~~~l~~~G~N~VRiPv~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~g--l~VilDlH 134 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNN--IRVWIDLH 134 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEEC
T ss_conf 8999999997699989996029993678887542379999999999999759--98999815
No 174
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=34.13 E-value=18 Score=14.20 Aligned_cols=19 Identities=16% Similarity=0.455 Sum_probs=10.9
Q ss_pred HHHHHHHHHCCCCEEEEEC
Q ss_conf 9999999973997899988
Q gi|254780442|r 20 EDVINRLHEEGTDVFRINM 38 (480)
Q Consensus 20 ~e~i~~l~~aG~nv~RiN~ 38 (480)
++.++.|-+.|+|++|+.+
T Consensus 48 ~~~l~~l~~~G~N~vRv~~ 66 (353)
T 2c0h_A 48 ESTLSDMQSHGGNSVRVWL 66 (353)
T ss_dssp HHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHCCCCEEEECC
T ss_conf 9999999985991999884
No 175
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=33.75 E-value=18 Score=14.15 Aligned_cols=82 Identities=18% Similarity=0.114 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEE----CCCHHHHHHHHHHCCCCCEEEEECCHHH-HHHHHHHCCCEEEEECCCCCH
Q ss_conf 88878999999998610478689997----0883799999841888869999299899-987666539379993687999
Q gi|254780442|r 353 ETGADVISSAARQIAETLRLSAIFCY----TASGATGLRAARERPKLEIIALSPMIQT-ARRLALVWGIHCVVTEDASDS 427 (480)
Q Consensus 353 ~~~~~aIa~aav~lA~~l~a~aIiv~----T~sG~tA~~iS~~RP~~pIiaiT~~~~t-~r~l~L~~GV~p~~~~~~~~~ 427 (480)
.+..+++. ....-..+.|++- ..+|.....--|.+|.+||+.+|..... .+...+--|+.-++.++++ .
T Consensus 32 ~~~~~al~-----~~~~~~~dlil~D~~mp~~~G~~l~~~ir~~~~ipiI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~-~ 105 (121)
T 1zh2_A 32 ETLQRGLL-----EAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFG-I 105 (121)
T ss_dssp SSHHHHHH-----HHHHHCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCC-H
T ss_pred CCHHHHHH-----HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCC-H
T ss_conf 88999999-----99717999999809999989799999999747990999978599999999998699999979999-9
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999998
Q gi|254780442|r 428 DDMVNRACRIVVE 440 (480)
Q Consensus 428 ~~~i~~a~~~l~~ 440 (480)
++........++.
T Consensus 106 ~~L~~~i~~~lrr 118 (121)
T 1zh2_A 106 GELQARLRVALRR 118 (121)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999887
No 176
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=33.68 E-value=18 Score=14.24 Aligned_cols=58 Identities=17% Similarity=0.233 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHH--CCCCCHHHHHHHH--HHHHCCCCEEEE
Q ss_conf 673689999999985139839980576788882--8898403477899--998519968998
Q gi|254780442|r 253 ELIPGIQKKLIRIARQLGKPVVIATQMLESMVT--SPFPTRAEVSDVA--TAVFEEADAIML 310 (480)
Q Consensus 253 e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~--~p~PTRaEv~Dva--nav~dG~D~imL 310 (480)
+.+-.+-.++-..|.+++.|||+.+|+=-+-.. +..+.+...+|++ .++.+.+|.++.
T Consensus 170 ~~~~~~~~~Lk~la~~~~v~vi~~~q~~r~~~~~~~~~~~~~~~~di~gS~~i~~~ad~vl~ 231 (296)
T 1cr0_A 170 KMIDNLMTKLKGFAKSTGVVLVVICHLKNPDKGKAHEEGRPVSITDLRGSGALRQLSDTIIA 231 (296)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECC-----------------CCC---CHHHHCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCEEEE
T ss_conf 88999999999999973882899960472214444223666402311122655714769999
No 177
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=33.66 E-value=18 Score=14.15 Aligned_cols=137 Identities=13% Similarity=0.175 Sum_probs=87.7
Q ss_pred HCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHH
Q ss_conf 34885325058557734799999862003433555327856631178887533124752222002158767368999999
Q gi|254780442|r 184 QTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLI 263 (480)
Q Consensus 184 ~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii 263 (480)
...+++.|-+.. .+.+|...++++....++.++|-|.-...+ -+..+-...|.+=|.-|.+|- .++ -+.++
T Consensus 56 ~~aG~EiVRvaV-p~~~~a~al~~I~~~~~iPlvaDiHf~~~l-a~~a~~~g~~kiRINPGNig~---~~~----~~~vv 126 (366)
T 3noy_A 56 YEAGCEIVRVAV-PHKEDVEALEEIVKKSPMPVIADIHFAPSY-AFLSMEKGVHGIRINPGNIGK---EEI----VREIV 126 (366)
T ss_dssp HHTTCCEEEEEC-CSHHHHHHHHHHHHHCSSCEEEECCSCHHH-HHHHHHTTCSEEEECHHHHSC---HHH----HHHHH
T ss_pred HHCCCCEEEECC-CCHHHHHHHHHHHHHCCCCCEECCCCCHHH-HHHHHHHHHHEECCCCCCCCC---HHH----HHHHH
T ss_conf 985999899844-999999969999971898854004335335-567766422002357433472---277----68999
Q ss_pred HHHHHCCCEEEEEHH-------HHHHHHHCCCCCH---HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 998513983998057-------6788882889840---347789999851996899814443544658999999998876
Q gi|254780442|r 264 RIARQLGKPVVIATQ-------MLESMVTSPFPTR---AEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASS 333 (480)
Q Consensus 264 ~~~~~~~kpvivATq-------~leSM~~~p~PTR---aEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~ 333 (480)
..|.++++|+-+..+ +|+..- .|.|-. +-.--+..+-.-|.+-+++|-..+. |..+|+.-+...+.
T Consensus 127 ~~ak~~~i~iRIGvN~GSL~~~~l~~~~-~~~~~amvesal~~i~~~e~~~f~~i~iS~KsS~---v~~~i~ayrlla~~ 202 (366)
T 3noy_A 127 EEAKRRGVAVRIGVNSGSLEKDLLEKYG-YPSAEALAESALRWSEKFEKWGFTNYKVSIKGSD---VLQNVRANLIFAER 202 (366)
T ss_dssp HHHHHHTCEEEEEEEGGGCCHHHHHHHS-SCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSS---HHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEECCCCCCCCHHHHHHHC-CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC---HHHHHHHHHHHHHC
T ss_conf 9999769973653565757899997624-6302346589999999998648876446788441---99999999998642
No 178
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=33.49 E-value=18 Score=14.13 Aligned_cols=51 Identities=12% Similarity=0.208 Sum_probs=30.1
Q ss_pred CHHHHHHHHHCCCCEEEEECCCC-------CH-HHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 99999999973997899988888-------98-9999999999999997499279999878
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSHT-------SH-DKMCELIKKIRAVELRSRRPIGILIDLQ 71 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SHg-------~~-e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 71 (480)
..+.++.|.+.|+|++||-+++. .. ++..+.++.+=+...+.| +-+++|+-
T Consensus 68 ~~d~~~~l~~~GfN~vRl~v~W~~iep~~g~yd~~~l~~l~~~v~~a~~~G--i~vilDlH 126 (481)
T 2osx_A 68 EADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWYAERG--YKVMLDMH 126 (481)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHHHHTT--CEEEEEEC
T ss_pred HHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEEC
T ss_conf 899999999779988985376999389999639899999999999999779--98999714
No 179
>3ez1_A Aminotransferase MOCR family; YP_604413.1, structural genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=33.44 E-value=18 Score=14.12 Aligned_cols=26 Identities=4% Similarity=0.204 Sum_probs=13.8
Q ss_pred CCCCEECCCCCCCCHHHHHHHHHHHC
Q ss_conf 88532505855773479999986200
Q gi|254780442|r 186 CEVDWVALSFIQSADDLLEIRKIISQ 211 (480)
Q Consensus 186 ~~vD~ialSfVr~~~di~~~r~~l~~ 211 (480)
.++..+.+..-.+.-|+..+.+++..
T Consensus 144 ~G~~~~~vp~~~~g~d~~~le~l~~~ 169 (423)
T 3ez1_A 144 LGFELLTVDMQSDGPDVDAVERLAGT 169 (423)
T ss_dssp HTCEEEEEEEETTEECHHHHHHHHHS
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHC
T ss_conf 69989996137999999999999727
No 180
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=33.36 E-value=17 Score=14.27 Aligned_cols=26 Identities=23% Similarity=0.394 Sum_probs=19.4
Q ss_pred CCCCCEEEEECCCEEECCCCCCCCEEE
Q ss_conf 133652674068422102344541124
Q gi|254780442|r 118 IKIGDRLLIDDGRVKLCVQEKGIGFIK 144 (480)
Q Consensus 118 ik~Gd~I~idDG~i~l~V~~~~~~~i~ 144 (480)
-|+|..|.|+| .|...|.++.++.++
T Consensus 8 Rk~gEsI~Ig~-~I~I~V~~i~g~~Vr 33 (63)
T 2bti_A 8 RRVGETLMIGD-EVTVTVLGVKGNQVR 33 (63)
T ss_dssp EETTCEEEETT-TEEEEEEEEETTEEE
T ss_pred EECCCEEEECC-CEEEEEEEEECCEEE
T ss_conf 12799899799-989999998299899
No 181
>2do3_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.5.5
Probab=33.22 E-value=17 Score=14.38 Aligned_cols=25 Identities=28% Similarity=0.436 Sum_probs=15.9
Q ss_pred CCCCCCCCCHHHCCCCCEEEEECCC
Q ss_conf 2212664422211336526740684
Q gi|254780442|r 106 RVMLPHPEIFASIKIGDRLLIDDGR 130 (480)
Q Consensus 106 ~i~i~y~~l~~~ik~Gd~I~idDG~ 130 (480)
.+-++..+|-+.+++||.+-+-.|+
T Consensus 6 ~~efp~~~LrK~F~~GDHVkVi~G~ 30 (69)
T 2do3_A 6 SGEFPAQELRKYFKMGDHVKVIAGR 30 (69)
T ss_dssp CCCCCCCCCCSSCCTTCEEEESSST
T ss_pred EEEECHHHCEEECCCCCEEEEECCE
T ss_conf 8775679905513499838990656
No 182
>1kmt_A RHO GDP-dissociation inhibitor 1; immunoglobulin fold, beta sandwich motif, isoprenyl-binding, protein binding; 1.30A {Homo sapiens} SCOP: b.1.18.8 PDB: 2jhu_A 2jhv_A 2jhw_A 1ft3_A 1ft0_A 1qvy_A 2jhz_A 2bxw_A 2jhx_A 2jhy_A 1rho_A 1fso_A 2ji0_A 2jhs_A* 2jht_A 1ajw_A 1gdf_A
Probab=32.87 E-value=16 Score=14.50 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=24.0
Q ss_pred CCEEEEEECCCCEEEEEECCCCCEEECCCCEEEEECC
Q ss_conf 9279999878986788654898189658999999532
Q gi|254780442|r 62 RPIGILIDLQGPKFRVGKFANSKVDLTEGQIFTLDNK 98 (480)
Q Consensus 62 ~~i~Il~Dl~GpkiR~g~~~~~~i~l~~G~~v~l~~~ 98 (480)
+|-.|-+|++|+ +..+++.++.+++|..+.++..
T Consensus 19 ~P~~i~ldl~~~---~~~lk~~~f~IKEGs~Y~~~i~ 52 (141)
T 1kmt_A 19 APGPLELDLTGD---LESFKKQSFVLKEGVEYRIKIS 52 (141)
T ss_dssp SSSCCEEETTSC---GGGGGGCCEEEETTCEEEEEEE
T ss_pred CCCCEEECCCCC---HHHHCCCCEEECCCCEEEEEEE
T ss_conf 998768748887---3450478779359978999999
No 183
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structure initiative; 1.80A {Bacteroides fragilis YCH46}
Probab=32.75 E-value=19 Score=14.04 Aligned_cols=73 Identities=7% Similarity=0.038 Sum_probs=44.0
Q ss_pred HHHHCCCCCEEEEE---------CCCHH-HHHHHHHHCCCCCEEEEECCHHHHHH-HHHHCCCEEEEECCCCCHHHHHHH
Q ss_conf 98610478689997---------08837-99999841888869999299899987-666539379993687999999999
Q gi|254780442|r 365 QIAETLRLSAIFCY---------TASGA-TGLRAARERPKLEIIALSPMIQTARR-LALVWGIHCVVTEDASDSDDMVNR 433 (480)
Q Consensus 365 ~lA~~l~a~aIiv~---------T~sG~-tA~~iS~~RP~~pIiaiT~~~~t~r~-l~L~~GV~p~~~~~~~~~~~~i~~ 433 (480)
++..+-..+.|++- ..+|. ..+.+.+..|.+||+.+|-....... -.+--|+.-++.++++ .++.+..
T Consensus 41 ~~l~~~~~dlillDl~mP~~~~~G~dGl~~l~~ir~~~~~ipvI~lT~~~~~~~~~~a~~~Ga~dyl~KP~~-~~~L~~~ 119 (140)
T 2qr3_A 41 TVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDFVVKPWD-NQKLLET 119 (140)
T ss_dssp HHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEEEEESCC-HHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCC-HHHHHHH
T ss_conf 999727999999916887777677519999999998689982899978999999999998699789979899-9999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780442|r 434 ACRIV 438 (480)
Q Consensus 434 a~~~l 438 (480)
..+.+
T Consensus 120 i~~al 124 (140)
T 2qr3_A 120 LLNAA 124 (140)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 184
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=32.71 E-value=19 Score=14.04 Aligned_cols=74 Identities=16% Similarity=0.258 Sum_probs=42.6
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 05855773479999986200343355532785663117888753312475222200215876736899999999851398
Q gi|254780442|r 192 ALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGK 271 (480)
Q Consensus 192 alSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~k 271 (480)
.+-|+...+-+..++....+.. ..+.+ +-+..+|-++|+ |+|.+-+-+..-..=-.||..+...+|
T Consensus 69 ~~~~i~~~~l~~~~~~~~~~~~--------~~~~~----~~~~~~~lLiiD--d~g~~~~~~~~~~~l~~ii~~r~~~~~ 134 (180)
T 3ec2_A 69 RGYFFDTKDLIFRLKHLMDEGK--------DTKFL----KTVLNSPVLVLD--DLGSERLSDWQRELISYIITYRYNNLK 134 (180)
T ss_dssp CCCEEEHHHHHHHHHHHHHHTC--------CSHHH----HHHHTCSEEEEE--TCSSSCCCHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEECCCHHHHHHHHHHCCC--------HHHHH----HHHCCCEEEEEE--CCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 3677514417888878873150--------89999----861751199998--213556999999999999999998899
Q ss_pred EEEEEHHH
Q ss_conf 39980576
Q gi|254780442|r 272 PVVIATQM 279 (480)
Q Consensus 272 pvivATq~ 279 (480)
|+|+.|+.
T Consensus 135 ~~iitSN~ 142 (180)
T 3ec2_A 135 STIITTNY 142 (180)
T ss_dssp EEEEECCC
T ss_pred EEEEECCC
T ss_conf 29997789
No 185
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=32.69 E-value=19 Score=14.03 Aligned_cols=45 Identities=18% Similarity=0.180 Sum_probs=33.7
Q ss_pred HHHHHHHHHHCCCCCEEEEECCC---------HHHHHHHHHHCCCCCEEEEECCH
Q ss_conf 99999998610478689997088---------37999998418888699992998
Q gi|254780442|r 359 ISSAARQIAETLRLSAIFCYTAS---------GATGLRAARERPKLEIIALSPMI 404 (480)
Q Consensus 359 Ia~aav~lA~~l~a~aIiv~T~s---------G~tA~~iS~~RP~~pIiaiT~~~ 404 (480)
.+.+..+.|.+.+++.||.-++. |.++..+-+ +++||++.+-|+.
T Consensus 254 ~~~~I~~~a~~~~adLlVmG~~~~~~~~~~llGs~t~~vl~-~~~~pvLiVkp~~ 307 (319)
T 3olq_A 254 PEQVIPQVCEELNAGIVVLGILGRTGLSAAFLGNTAEQLID-HIKCDLLAIKPDG 307 (319)
T ss_dssp HHHHHHHHHHHTTEEEEEEECCSCCSTHHHHHHHHHHHHHT-TCCSEEEEECCTT
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHH-CCCCCEEEECCCC
T ss_conf 89999999987599999988899756430105719999995-0999899989999
No 186
>3mmw_A Endoglucanase; TIM barrel fold, hydrolase; 1.85A {Thermotoga maritima} PDB: 3mmu_A
Probab=32.67 E-value=19 Score=14.03 Aligned_cols=52 Identities=13% Similarity=0.371 Sum_probs=28.0
Q ss_pred CHHHHHHHHHCCCCEEEEECCCC---------C-HHHHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 99999999973997899988888---------9-899999999999999974992799998789
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSHT---------S-HDKMCELIKKIRAVELRSRRPIGILIDLQG 72 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SHg---------~-~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~G 72 (480)
.++.+..|.+.|+|.+||-+++. + .++..+.++.+=+.+.+.| +.+++|+-+
T Consensus 35 t~~~~~~i~~~G~N~VRipi~w~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~g--i~vild~h~ 96 (317)
T 3mmw_A 35 KDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRG--LAVVINIHH 96 (317)
T ss_dssp CTHHHHHHHHTTCCEEEECCCCGGGBCSSTTCCBCHHHHHHHHHHHHHHHTTT--CEEEEECCC
T ss_pred HHHHHHHHHHCCCCEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEECCC
T ss_conf 29999999983999899477789836888887408899999999999999779--989997466
No 187
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltransferase; 5-methyltetrahydrofolate,methyltransferase, TIM barrel; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=32.51 E-value=19 Score=14.01 Aligned_cols=53 Identities=19% Similarity=0.243 Sum_probs=33.0
Q ss_pred HHHHHHHHCCCCEEEEECCCCC---HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEE
Q ss_conf 9999999739978999888889---899999999999999974992799998789867
Q gi|254780442|r 21 DVINRLHEEGTDVFRINMSHTS---HDKMCELIKKIRAVELRSRRPIGILIDLQGPKF 75 (480)
Q Consensus 21 e~i~~l~~aG~nv~RiN~SHg~---~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~Gpki 75 (480)
+.-+++.++|+++.=+|..+.. .|+...++..|..+.+..+. +|.+|+.=|+.
T Consensus 41 ~~A~~qv~~GA~iIDVn~G~~~v~~~ee~~rvv~~I~~i~~~~dv--PisIDT~~~~v 96 (300)
T 3k13_A 41 SIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIARV--PVMIDSSKWEV 96 (300)
T ss_dssp HHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHHTS--CEEEECSCHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC--CEEECCCCHHH
T ss_conf 999999986999898589988888899999999999985511687--64735887899
No 188
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=32.38 E-value=19 Score=14.00 Aligned_cols=101 Identities=18% Similarity=0.172 Sum_probs=55.0
Q ss_pred HHHHHHH-HHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEE--EE--------CCH---HHHHHHHHHHHHHHE
Q ss_conf 5567789-988734885325058557734799999862003433555--32--------785---663117888753312
Q gi|254780442|r 173 QKDREDL-HAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMS--KI--------EKP---RAIEYASEIIQLSDA 238 (480)
Q Consensus 173 ekD~~di-~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~Iia--KI--------E~~---~al~nl~eI~~~sDg 238 (480)
+.|.+.+ .-|.+ .||..+...-+ +.+|-..+.++.... ..|++ =| +.. .-++.+.+.......
T Consensus 26 ~~D~~~Vi~rA~~-~GV~~ii~~g~-~~~~~~~~~~la~~~-~~i~~~~GiHP~~~~~~~~~~~~~~~~~l~~l~~~~~~ 102 (301)
T 2xio_A 26 QDDLQDVIGRAVE-IGVKKFMITGG-NLQDSKDALHLAQTN-GMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKG 102 (301)
T ss_dssp CCCHHHHHHHHHH-HTEEEEEECCC-SHHHHHHHHHHHTTC-TTEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTT
T ss_pred CCCHHHHHHHHHH-CCCCEEEEECC-CHHHHHHHHHHHHHC-CCEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 0379999999998-49988999648-999999999998429-87468817484054046655677899999999743667
Q ss_pred EEEECCCCCHHCCH-H-HHHHHHHH----HHHHHHHCCCEEEEE
Q ss_conf 47522220021587-6-73689999----999985139839980
Q gi|254780442|r 239 VMVARGDLGVEMAL-E-LIPGIQKK----LIRIARQLGKPVVIA 276 (480)
Q Consensus 239 imiaRGDLg~e~~~-e-~vp~~Qk~----ii~~~~~~~kpvivA 276 (480)
=.+|=|..|++..- . .-...|++ -+..|.+++|||++=
T Consensus 103 ~~vAIGEiGLDy~~~~~~~~~~Q~~vF~~ql~lA~~~~lPvviH 146 (301)
T 2xio_A 103 KVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLH 146 (301)
T ss_dssp TEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEE
T ss_pred CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 76799875525664569989999999999999999848874798
No 189
>3bbo_W Ribosomal protein L24; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=32.38 E-value=15 Score=14.66 Aligned_cols=19 Identities=16% Similarity=0.200 Sum_probs=11.3
Q ss_pred CEEECCCCEEEEECCCCCC
Q ss_conf 1896589999995324556
Q gi|254780442|r 84 KVDLTEGQIFTLDNKDSLG 102 (480)
Q Consensus 84 ~i~l~~G~~v~l~~~~~~~ 102 (480)
+..+++||.|..-..+..|
T Consensus 66 K~~IKkGD~V~VIsGkDKG 84 (191)
T 3bbo_W 66 KRHVKVGDTVKVISGGEKG 84 (191)
T ss_dssp SCCSCCSSCEEECSSSSTT
T ss_pred EEECCCCCEEEEEECCCCC
T ss_conf 1001589999992568999
No 190
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=32.22 E-value=19 Score=13.98 Aligned_cols=75 Identities=11% Similarity=0.051 Sum_probs=44.5
Q ss_pred HHHCCCCCEEEEECC----CH-HHHHHHHHHCCCCCEEEEECCHH-HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 861047868999708----83-79999984188886999929989-9987666539379993687999999999999999
Q gi|254780442|r 366 IAETLRLSAIFCYTA----SG-ATGLRAARERPKLEIIALSPMIQ-TARRLALVWGIHCVVTEDASDSDDMVNRACRIVV 439 (480)
Q Consensus 366 lA~~l~a~aIiv~T~----sG-~tA~~iS~~RP~~pIiaiT~~~~-t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~ 439 (480)
+......+.+++--. +| ..++.+.+..|..||+.+|.... ....-.+-.|+..|+.+. .+.++.++...+.+.
T Consensus 56 ~~~~~~pDvvllDl~mp~~~G~el~~~ir~~~~~~~vivlS~~~~~~~~~~a~~~Ga~~yl~Kp-~~~~~L~~aI~~~~~ 134 (152)
T 3eul_A 56 LIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKD-STRTEIVKAVLDCAK 134 (152)
T ss_dssp HHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETT-CCHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECC-CCHHHHHHHHHHHHC
T ss_conf 9984699999981899998999999999975899859999686999999999986998999799-999999999999987
Q ss_pred HC
Q ss_conf 88
Q gi|254780442|r 440 EQ 441 (480)
Q Consensus 440 ~~ 441 (480)
.+
T Consensus 135 g~ 136 (152)
T 3eul_A 135 GR 136 (152)
T ss_dssp CC
T ss_pred CC
T ss_conf 99
No 191
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=32.20 E-value=7.7 Score=16.87 Aligned_cols=38 Identities=26% Similarity=0.323 Sum_probs=28.6
Q ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCH
Q ss_conf 9777752699941877579999999997399789998888898
Q gi|254780442|r 1 MVNLRRIKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTSH 43 (480)
Q Consensus 1 ~~~mrktKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~~ 43 (480)
|.+|+|.|+|.-+||.-+-+.++.+++.. ++|+.|-+.
T Consensus 6 m~~~~k~kiI~l~G~pGSGKsT~a~~La~-----~~~~~~is~ 43 (199)
T 2bwj_A 6 MEDLRKCKIIFIIGGPGSGKGTQCEKLVE-----KYGFTHLST 43 (199)
T ss_dssp HHHHHHSCEEEEEECTTSSHHHHHHHHHH-----HHTCEEEEH
T ss_pred HHHCCCCCEEEEECCCCCCHHHHHHHHHH-----HHCCEEEEC
T ss_conf 65654786899989999998999999999-----869906834
No 192
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=32.20 E-value=19 Score=13.98 Aligned_cols=31 Identities=16% Similarity=0.202 Sum_probs=13.7
Q ss_pred CEEEEECCCHHHHHHH-----HHHCCCCCEEEEECCH
Q ss_conf 6899970883799999-----8418888699992998
Q gi|254780442|r 373 SAIFCYTASGATGLRA-----ARERPKLEIIALSPMI 404 (480)
Q Consensus 373 ~aIiv~T~sG~tA~~i-----S~~RP~~pIiaiT~~~ 404 (480)
+.+|++|.||+|...+ ++-+ .++++++|.+.
T Consensus 91 DvvI~iS~sG~t~~~~~~~~~ak~~-g~~vI~IT~~~ 126 (200)
T 1vim_A 91 DVLVGISGSGETTSVVNISKKAKDI-GSKLVAVTGKR 126 (200)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHH-TCEEEEEESCT
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHC-CCEEEEEECCC
T ss_conf 9899857997742169999999987-99699997999
No 193
>3knz_A Putative sugar binding protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.50A {Salmonella enterica subsp}
Probab=32.14 E-value=16 Score=14.56 Aligned_cols=18 Identities=22% Similarity=0.143 Sum_probs=8.5
Q ss_pred ECCHHHHHHHHHHCCCEE
Q ss_conf 299899987666539379
Q gi|254780442|r 401 SPMIQTARRLALVWGIHC 418 (480)
Q Consensus 401 T~~~~t~r~l~L~~GV~p 418 (480)
.|-...+-++++..|+.|
T Consensus 331 ip~Qllay~lA~~~Ginp 348 (366)
T 3knz_A 331 IPLQMLCAILPPQKGINP 348 (366)
T ss_dssp HHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHHHCCCCC
T ss_conf 999999999999819999
No 194
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase; carbon dioxide fixation, cobalamin; 2.20A {Moorella thermoacetica atcc 39073} SCOP: c.1.21.2 PDB: 2e7f_A* 2ogy_A*
Probab=31.89 E-value=19 Score=13.94 Aligned_cols=53 Identities=17% Similarity=0.228 Sum_probs=32.8
Q ss_pred HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEE
Q ss_conf 9999999739978999888889899999999999999974992799998789867
Q gi|254780442|r 21 DVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELRSRRPIGILIDLQGPKF 75 (480)
Q Consensus 21 e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~Gpki 75 (480)
+.-++|+++|+++.=||......++..++...+..+.... .++|.+|+.=|+.
T Consensus 29 ~~A~~mv~~GAdiIDIg~g~~~~~e~e~~~~~i~~i~~~~--~~piSIDT~~~ev 81 (262)
T 1f6y_A 29 EWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVS--NLTLCLDSTNIKA 81 (262)
T ss_dssp HHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTC--CSEEEEECSCHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH--CCCCCCCCCCHHH
T ss_conf 9999999879998996899987688999999999999982--7995125787699
No 195
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=31.73 E-value=19 Score=13.93 Aligned_cols=51 Identities=14% Similarity=0.188 Sum_probs=31.7
Q ss_pred CHHHHHHHHHCCCCEEEEECCC---------CC-HHHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 9999999997399789998888---------89-89999999999999997499279999878
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSH---------TS-HDKMCELIKKIRAVELRSRRPIGILIDLQ 71 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SH---------g~-~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 71 (480)
+++.++.|.+.|+|++||=++. ++ .++..+.++.+=....+.+ +-+++|+.
T Consensus 33 ~~~di~~l~~~G~N~VRlP~~~~~~~~~~~~~~~~~~~~~~l~~~v~~a~~~g--l~vilD~H 93 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKG--AYAVVDPH 93 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTT--CEEEEEEC
T ss_pred CHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEECC
T ss_conf 99999999987999899631499807677788529899999999999998558--64997234
No 196
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=31.43 E-value=9.6 Score=16.19 Aligned_cols=51 Identities=18% Similarity=0.253 Sum_probs=37.4
Q ss_pred HCCCCCEEEEECCCHHHHHHHHHHCC----CCCEEEEECCHHHHHHHHHHCCCEEEEECCC
Q ss_conf 10478689997088379999984188----8869999299899987666539379993687
Q gi|254780442|r 368 ETLRLSAIFCYTASGATGLRAARERP----KLEIIALSPMIQTARRLALVWGIHCVVTEDA 424 (480)
Q Consensus 368 ~~l~a~aIiv~T~sG~tA~~iS~~RP----~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~ 424 (480)
.+..++.+++-|.+|.||--+|.--| ..+.+.+||--. ..+...|+..+..
T Consensus 144 ~~~~gDGlivsTptGSTAY~lSaGGpIv~p~~~~~~ltpI~p------~~l~~rplV~~~~ 198 (258)
T 1yt5_A 144 MWFFADGVVISTPTGSTAYSLSIGGPIIFPECEVLEISPIAP------QFFLTRSVVIPSN 198 (258)
T ss_dssp EEEEESEEEEECTGGGGTTTTTTTCCCCCTTCCEEEEEEESC------STTCCCCEEEETT
T ss_pred EEEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEECCC------CCCCCCCCCCCCC
T ss_conf 987747999806476457875079996489867279986155------4245799606897
No 197
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=31.18 E-value=20 Score=13.86 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=25.5
Q ss_pred CCCCCCCEEEE-----EC-C----CCCCCHHHHHHHHHCCCCEE
Q ss_conf 97777526999-----41-8----77579999999997399789
Q gi|254780442|r 1 MVNLRRIKIIS-----TL-G----PSSFSEDVINRLHEEGTDVF 34 (480)
Q Consensus 1 ~~~mrktKIi~-----Tl-G----Pas~~~e~i~~l~~aG~nv~ 34 (480)
|++|++.++|+ || . .+-.+.+.|++|.++|+.++
T Consensus 3 ~~~~~~~~lIftDlDGTLl~~~~~i~~~~~~ai~~L~~~Gi~v~ 46 (275)
T 1xvi_A 3 MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVI 46 (275)
T ss_dssp ---CCCCEEEEEECTTTTSCSSCCSCCTTHHHHHHHHHTTCCEE
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 87799997999968877619589679999999999997899999
No 198
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, structural genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=31.13 E-value=20 Score=13.86 Aligned_cols=97 Identities=18% Similarity=0.145 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHHHCCCCEEEEEECCHH----HHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 734799999862003433555327856----6311788875331247522220021587673689999999985139839
Q gi|254780442|r 198 SADDLLEIRKIISQNKIGLMSKIEKPR----AIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPV 273 (480)
Q Consensus 198 ~~~di~~~r~~l~~~~~~IiaKIE~~~----al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpv 273 (480)
+...+..+|.... .+++..-++... ....+..+-..++++-+....+ -...++.|++.|.+|
T Consensus 179 ~~~~l~~~~~~~p--~~~~~~l~~~~~~~~~~~~~~~~i~~~~~~v~~~~~~~------------~~~~v~~~~~~G~~V 244 (287)
T 2oog_A 179 SDESLKKIHRQNK--HVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDL------------TEQNTHHLKDLGFIV 244 (287)
T ss_dssp CHHHHHHHHHHCT--TSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBGGGC------------CHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHCC--CCCEEEEECCCCHHHHHHHHHHHHHHHHEEEECCHHHC------------CHHHHHHHHHCCCEE
T ss_conf 9999999998689--98689994454212446788888652001331224128------------999999999879999
Q ss_pred EEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 9805767888828898403477899998519968998144435446589999999
Q gi|254780442|r 274 VIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMS 328 (480)
Q Consensus 274 ivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~ 328 (480)
++-| ++ +..++..++..|+|||+ -.||..+.+++.
T Consensus 245 ~vwT------Vn-------~~~~~~~l~~~GVdgIi-------TD~P~~~~~~lk 279 (287)
T 2oog_A 245 HPYT------VN-------EKADMLRLNKYGVDGVF-------TNFADKYKEVIK 279 (287)
T ss_dssp CCBC------CC-------SHHHHHHHHHHTCSEEE-------ESCHHHHHHHHH
T ss_pred EEEC------CC-------CHHHHHHHHHCCCCEEE-------ECCHHHHHHHHH
T ss_conf 9980------89-------99999999866999999-------886999999997
No 199
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89}
Probab=31.12 E-value=20 Score=13.86 Aligned_cols=17 Identities=12% Similarity=0.403 Sum_probs=8.2
Q ss_pred EEEEEEECCCCCCCCCEEEE
Q ss_conf 99985222788886415999
Q gi|254780442|r 450 IIISAGLPLGTPGSTNMLRI 469 (480)
Q Consensus 450 VVvv~G~p~~~~G~TN~irv 469 (480)
|.++.|..++.. +.+|+
T Consensus 332 I~v~pG~~f~~~---~~iRi 348 (375)
T 3op7_A 332 VLLVPGNRFERD---GYVRL 348 (375)
T ss_dssp EECEEGGGGTCT---TEEEE
T ss_pred EEEEECCCCCCC---CEEEE
T ss_conf 999947547999---97999
No 200
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=31.12 E-value=8.7 Score=16.48 Aligned_cols=312 Identities=13% Similarity=0.168 Sum_probs=145.5
Q ss_pred CHHHHHHHHHCCCCEEEEECCC-----CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCEEECCCCEE
Q ss_conf 9999999997399789998888-----89899999999999999974992799998789867886548981896589999
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSH-----TSHDKMCELIKKIRAVELRSRRPIGILIDLQGPKFRVGKFANSKVDLTEGQIF 93 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SH-----g~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkiR~g~~~~~~i~l~~G~~v 93 (480)
+..+|+.|++.|..+.=| +|| |..++...+-.-.+.+++.++++|...-|+-|++.+.... .++.|+.+
T Consensus 42 ~lpTI~~L~~~gak~VIL-~SHlGRP~g~~~~~~SL~pva~~L~~~l~~~V~f~~d~~g~~~~~~i~-----~~~~G~Il 115 (415)
T 1qpg_A 42 ALPTIKYVLEHHPRYVVL-ASHLGQPNGERNEKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVK-----ASAPGSVI 115 (415)
T ss_dssp HHHHHHHHHTTCCSEEEE-ECCCSCCCSSCCGGGCSHHHHHHHHHHHTSCCEEESCSSSHHHHHHHH-----TCCTTEEE
T ss_pred HHHHHHHHHHCCCCEEEE-ECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHH-----HCCCCCEE
T ss_conf 999999999879988999-616889999879876839999999998789749706766647676787-----47877189
Q ss_pred EEECCCCC-CCC-------CCC---CCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEECCCCCCCC
Q ss_conf 99532455-644-------422---1266442221133652674068422102344541124551388087114564467
Q gi|254780442|r 94 TLDNKDSL-GSS-------DRV---MLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKVIAGISIADRKGISFP 162 (480)
Q Consensus 94 ~l~~~~~~-~~~-------~~i---~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvnip 162 (480)
.|-+=... +.. +.. .=+.+.|.+.+..--.+|++|..= +--..--++. |+.++
T Consensus 116 LLENvRF~~~E~~~~~~~~~~~~~~~~n~~~fak~LA~laDiyVNDAF~---~aHR~haS~~-------------g~~~~ 179 (415)
T 1qpg_A 116 LLENLRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYINDAFG---TAHRAHSSMV-------------GFDLP 179 (415)
T ss_dssp EECCGGGSHHHHTEEEETTEEEECCHHHHHHHHHHHHHTCSEEEECCGG---GTTSCCHHHH-------------CCCCS
T ss_pred EEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC---CCCCCCCCCC-------------CCCCC
T ss_conf 8420110411001564312332111342899999986424474305322---1352445223-------------44578
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCC-C--CEEE--EEECCHHHHHHHHHHHHHHH
Q ss_conf 85445556765567789988734885325058557734799999862003-4--3355--53278566311788875331
Q gi|254780442|r 163 DTFLTTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQN-K--IGLM--SKIEKPRAIEYASEIIQLSD 237 (480)
Q Consensus 163 ~~~i~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~-~--~~Ii--aKIE~~~al~nl~eI~~~sD 237 (480)
.. -.-.|-+ +.+..+.+.+... + +-|+ |||+++-.+ ++.+++.+|
T Consensus 180 ~s--~aG~lme--------------------------kEl~~L~~~l~~p~rP~~aIlGGaKisdKi~~--l~~l~~k~D 229 (415)
T 1qpg_A 180 QR--AAGFLLE--------------------------KELKYFGKALENPTRPFLAILGGAKVADKIQL--IDNLLDKVD 229 (415)
T ss_dssp CE--EECHHHH--------------------------HHHHHHHHHHSSCCSSEEEEECSSCSGGGHHH--HHHHTTTCS
T ss_pred CC--CCHHHHH--------------------------HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH--HHHHHHHCC
T ss_conf 34--0138899--------------------------99999999981889986999725735358999--998875301
Q ss_pred EEEEECC--------CCCHHCCH----HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
Q ss_conf 2475222--------20021587----67368999999998513983998057678888288984034778999985199
Q gi|254780442|r 238 AVMVARG--------DLGVEMAL----ELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEA 305 (480)
Q Consensus 238 gimiaRG--------DLg~e~~~----e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~ 305 (480)
.|++.=| ..|.+++- +..-..-+.++.+|...+..++.-+...-+-..+..+.+.++.+.. .+-++.
T Consensus 230 ~iiigG~mantflka~~g~~ig~s~~e~~~~~~~~~i~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~-~i~~~~ 308 (415)
T 1qpg_A 230 SIIIGGGMAFTFKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKE-GIPAGW 308 (415)
T ss_dssp EEEECGGGHHHHHHHHSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEEECCSEEEEESSSSSSCCCCEEETTT-CCCTTC
T ss_pred EEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCEEECCCC-CCCCCC
T ss_conf 1563528999998751246267300355656799999999997499787325679741445556722635513-578766
Q ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf 68998144435446589999999988763010124444443203878888789999999986104786899970883799
Q gi|254780442|r 306 DAIMLSAETASGSYPVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATG 385 (480)
Q Consensus 306 D~imLs~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA 385 (480)
-++= + -.++++....++..+.. ..|.-.-...+..+-...+.+++.+..+.... ++ + +.---|.|+
T Consensus 309 ~i~D------I---G~~Ti~~~~~~I~~akt-I~wNGP~GvfE~~~F~~GT~~l~~~ia~~~~~-~~--~-sivGGGdt~ 374 (415)
T 1qpg_A 309 QGLD------N---GPESRKLFAATVAKAKT-IVWNGPPGVFEFEKFAAGTKALLDEVVKSSAA-GN--T-VIIGGGDTA 374 (415)
T ss_dssp EEEE------E---CHHHHHHHHHHHTTCSE-EEEESCSSCTTSGGGCHHHHHHHHHHHHHHHH-TC--E-EEECCHHHH
T ss_pred CCCC------C---CHHHHHHHHHHHHHHCE-EEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC-CC--E-EEEECHHHH
T ss_conf 2244------3---53439999999885377-89967754645652516899999999971057-98--4-999578999
Q ss_pred HHHHHHCCCCCE
Q ss_conf 999841888869
Q gi|254780442|r 386 LRAARERPKLEI 397 (480)
Q Consensus 386 ~~iS~~RP~~pI 397 (480)
..+.++-..-.+
T Consensus 375 ~ai~~~g~~~~~ 386 (415)
T 1qpg_A 375 TVAKKYGVTDKI 386 (415)
T ss_dssp HHHHHTTCGGGS
T ss_pred HHHHHCCCCCCC
T ss_conf 999975986787
No 201
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=30.94 E-value=20 Score=13.83 Aligned_cols=35 Identities=23% Similarity=0.254 Sum_probs=14.5
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCC
Q ss_conf 64467854455567655677899887348853250585
Q gi|254780442|r 158 GISFPDTFLTTQALTQKDREDLHAALQTCEVDWVALSF 195 (480)
Q Consensus 158 gvnip~~~i~l~~ltekD~~di~~a~~~~~vD~ialSf 195 (480)
|+|.++....-+.+++.|.+.+ ++..+++.|=+++
T Consensus 30 Gvn~~~~~~~~~~~~~~~~~~l---~~~~G~N~VRl~~ 64 (306)
T 2cks_A 30 GMSTHGIQWFDHCLTDSSLDAL---AYDWKADIIRLSM 64 (306)
T ss_dssp EEECCCHHHHGGGCSHHHHHHH---HHTSCCSEEEEEE
T ss_pred EEECCCHHHCCCCCCHHHHHHH---HHHCCCCEEEEEE
T ss_conf 9836752313787889999999---9973997899941
No 202
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=30.73 E-value=20 Score=13.81 Aligned_cols=19 Identities=16% Similarity=0.410 Sum_probs=13.8
Q ss_pred HHHHHHCCCCEEEEECCCCCH
Q ss_conf 999997399789998888898
Q gi|254780442|r 23 INRLHEEGTDVFRINMSHTSH 43 (480)
Q Consensus 23 i~~l~~aG~nv~RiN~SHg~~ 43 (480)
..+|-..|-++ ||||.|.+
T Consensus 26 a~e~~~~G~~v--i~l~~G~P 44 (407)
T 2zc0_A 26 ASELQKKGVKL--ISLAAGDP 44 (407)
T ss_dssp HHHHHHSSCCC--EECCSCCC
T ss_pred HHHHHHCCCCE--EECCCCCC
T ss_conf 99999679980--88889568
No 203
>3oru_A DUF1989 family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, metal binding protein; HET: MSE; 1.11A {Ruegeria SP}
Probab=30.41 E-value=20 Score=13.77 Aligned_cols=56 Identities=20% Similarity=0.233 Sum_probs=33.2
Q ss_pred CEEECCCCEEEEECCCCCCCCCCCCCCCCC--------------CHHHCCCCCEEEEECCCEEECCCCCC
Q ss_conf 189658999999532455644422126644--------------22211336526740684221023445
Q gi|254780442|r 84 KVDLTEGQIFTLDNKDSLGSSDRVMLPHPE--------------IFASIKIGDRLLIDDGRVKLCVQEKG 139 (480)
Q Consensus 84 ~i~l~~G~~v~l~~~~~~~~~~~i~i~y~~--------------l~~~ik~Gd~I~idDG~i~l~V~~~~ 139 (480)
.+.+++||.++++.-+..-..+.+..|-.+ -.-.+++|+.++=|.|+..++|++-.
T Consensus 46 a~~v~~Gq~lrI~d~~G~QvvD~~~fna~d~~Er~s~~~T~~~~~~~~l~~G~~L~S~~~rpl~tIveDt 115 (234)
T 3oru_A 46 AIRMAQGEALMVINRDGSQIGDFWAFVEGDCGEYLSMEHLRPTLRRVSPRPGDVLVSNRRRPILTLLEDS 115 (234)
T ss_dssp EEEECTTCEEEEECSSSSCCEEEEEEETTEEEEEBCHHHHHHHHTSSSCCTTCEEEBTTSSEEEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCCEEEEEEECCCCHHHCCCHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECC
T ss_conf 9998999989999389993776644027772432566577887443145789884856998589999768
No 204
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=30.37 E-value=20 Score=13.77 Aligned_cols=294 Identities=17% Similarity=0.200 Sum_probs=134.3
Q ss_pred CHHHHHHHHHCCCCEEEEECCCCCH------HHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCEEECCCCE
Q ss_conf 9999999997399789998888898------9999999999999997499279999878986788654898189658999
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSHTSH------DKMCELIKKIRAVELRSRRPIGILIDLQGPKFRVGKFANSKVDLTEGQI 92 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SHg~~------e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkiR~g~~~~~~i~l~~G~~ 92 (480)
+..+|+.|++.|..+. | +||-.+ +.....-.-.+.+++..+.++...-|.-|+ ..++.|+.
T Consensus 40 ~lpTI~~ll~~gakvv-l-~SH~GRP~~~~~~~~~Sl~~v~~~L~~~l~~~v~~~~~~~~~-----------~~~~~g~i 106 (387)
T 1zmr_A 40 SLPTIELALKQGAKVM-V-TSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG-----------VDVAEGEL 106 (387)
T ss_dssp HHHHHHHHHHTTCEEE-E-ECCCSSCBTTBCCGGGCSHHHHHHHHHHCSSCEEEESCCTTC-----------CCCCTTCE
T ss_pred HHHHHHHHHHCCCEEE-E-ECCCCCCCCCCCCCHHCHHHHHHHHHHHHCCCCCCCCCCCCC-----------HHCCCCCE
T ss_conf 9999999997899899-9-836889999984800153889999999864654123224650-----------00587739
Q ss_pred EEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 99953245564442212664422211336526740684221023445411245513880871145644678544555676
Q gi|254780442|r 93 FTLDNKDSLGSSDRVMLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKVIAGISIADRKGISFPDTFLTTQALT 172 (480)
Q Consensus 93 v~l~~~~~~~~~~~i~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvnip~~~i~l~~lt 172 (480)
+-|-+=......+ -|.+.|.+.+...-.+|++|..= +- .|+.-++-+..
T Consensus 107 ~LLENvRf~~~E~---~n~~~f~~~LA~l~DiyVNDAF~---~a------------------HR~haS~~gi~------- 155 (387)
T 1zmr_A 107 VVLENVRFNKGEK---KDDETLSKKYAALCDVFVMDAFG---TA------------------HRAQASTHGIG------- 155 (387)
T ss_dssp EEECCGGGSTTTT---TTCHHHHHHHHHTCSEEEECCGG---GT------------------TSCCCCCCCHH-------
T ss_pred EEHHHCCCCCCCC---CCCHHHHHHHCCCCCEEECCCHH---HH------------------HCCCCHHHHHH-------
T ss_conf 8644207675543---35676776411335477414144---44------------------12450023168-------
Q ss_pred HHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCC-C--CEEE--EEECCHHHHHHHHHHHHHHHEEEEECC---
Q ss_conf 5567789988734885325058557734799999862003-4--3355--532785663117888753312475222---
Q gi|254780442|r 173 QKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQN-K--IGLM--SKIEKPRAIEYASEIIQLSDAVMVARG--- 244 (480)
Q Consensus 173 ekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~-~--~~Ii--aKIE~~~al~nl~eI~~~sDgimiaRG--- 244 (480)
++ +. .-+.+.- =.+.+..+.+.+.+. + +-|+ |||+++-.+ ++.+++.+|.|++.=|
T Consensus 156 -------~~-~~---~s~aG~l---~ekEl~~L~~~l~~p~~P~~aIlGGaKisdKi~v--l~~l~~k~D~iiigG~man 219 (387)
T 1zmr_A 156 -------KF-AD---VACAGPL---LAAELDALGKALKEPARPMVAIVGGSKVSTKLTV--LDSLSKIADQLIVGGGIAN 219 (387)
T ss_dssp -------HH-SS---EEEECHH---HHHHHHHHHHHHSSCSSSEEEEEEESCTTTTHHH--HHHHHTTCSEEEEEEHHHH
T ss_pred -------HH-HH---HHHHHHH---HHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH--HHHHHHHCEEEEECHHHHH
T ss_conf -------88-88---8889999---9999999999983889986999506728789999--9999851059998709999
Q ss_pred --------CCCHHCCHHHHHHHHHHHHHHHH-HCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf --------20021587673689999999985-139839980576788882889840347789999851996899814443
Q gi|254780442|r 245 --------DLGVEMALELIPGIQKKLIRIAR-QLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETA 315 (480)
Q Consensus 245 --------DLg~e~~~e~vp~~Qk~ii~~~~-~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa 315 (480)
++|-..--+.....++.+...|+ ..-..+.++...-+ +...+...+.++ .++ ...|-
T Consensus 220 tFL~A~G~~IG~sl~E~~~~~~~~~~~~~~~i~lp~D~~~~~~~~~----~~~~~~~~~~~i----~~~--~~i~D---- 285 (387)
T 1zmr_A 220 TFIAAQGHDVGKSLYEADLVDEAKRLLTTCNIPVPSDVRVATEFSE----TAPATLKSVNDV----KAD--EQILD---- 285 (387)
T ss_dssp HHHHHTTCCCTTCSCCGGGHHHHHHHHTTSCCCCCSEEEEESSSSS----SCCCEEEEGGGC----CTT--CEEEE----
T ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCC----CCCEEEEECCCC----CCC--CEEEE----
T ss_conf 9999759877877643025999999982799666644363022368----887178516567----999--71773----
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCC
Q ss_conf 54465899999999887630101244444432038788887899999999861047868999708837999998418888
Q gi|254780442|r 316 SGSYPVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGLRAARERPKL 395 (480)
Q Consensus 316 ~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS~~RP~~ 395 (480)
+| -++++....++.+++. ..|.-.-...+..+-...+..++.+..+ .++..|+ --|.|+..+.++--.-
T Consensus 286 IG---~~Ti~~~~~~i~~akt-i~wNGP~GvfE~~~F~~GT~~l~~ai~~----~~~~siv---GGGdt~aai~~~g~~~ 354 (387)
T 1zmr_A 286 IG---DASAQELAEILKNAKT-ILWNGPVGVFEFPNFRKGTEIVANAIAD----SEAFSIA---GGGDTLAAIDLFGIAD 354 (387)
T ss_dssp EC---HHHHHHHHHHHHHCSE-EEEESCSBCTTSGGGCHHHHHHHHHHHH----SSSEEEE---CSHHHHHHHHHHTCGG
T ss_pred CC---HHHHHHHHHHHHHHCE-EEEECCCCCCCCCCHHHHHHHHHHHHHH----CCCEEEE---CCHHHHHHHHHCCCCC
T ss_conf 23---0336778999864166-8881554444466253899999999986----8998999---6879999999829866
Q ss_pred CE
Q ss_conf 69
Q gi|254780442|r 396 EI 397 (480)
Q Consensus 396 pI 397 (480)
.+
T Consensus 355 ~~ 356 (387)
T 1zmr_A 355 KI 356 (387)
T ss_dssp GS
T ss_pred CC
T ss_conf 87
No 205
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=30.36 E-value=20 Score=13.77 Aligned_cols=22 Identities=23% Similarity=0.451 Sum_probs=15.0
Q ss_pred CHHHHHHHHHCCCCEEEEECCC
Q ss_conf 9999999997399789998888
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSH 40 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SH 40 (480)
+++.|..|.++|+|.+||-+++
T Consensus 71 t~~~i~~ik~~Gfn~vRipv~w 92 (395)
T 2jep_A 71 TPELIKKVKAAGFKSIRIPVSY 92 (395)
T ss_dssp CHHHHHHHHHTTCCEEEECCCC
T ss_pred CHHHHHHHHHCCCCEEEEECCH
T ss_conf 5999999998399869962569
No 206
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=30.16 E-value=21 Score=13.74 Aligned_cols=45 Identities=11% Similarity=0.134 Sum_probs=39.7
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf 999999997399789998888898999999999999999749927
Q gi|254780442|r 20 EDVINRLHEEGTDVFRINMSHTSHDKMCELIKKIRAVELRSRRPI 64 (480)
Q Consensus 20 ~e~i~~l~~aG~nv~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i 64 (480)
.+.++..+++|++++-+-.-|.+.++..+....++++.++.+.++
T Consensus 28 ~~~v~~~l~~Gv~~iQlR~K~~~~~~~~~~a~~l~~l~~~~~~~l 72 (540)
T 3nl6_A 28 YGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPL 72 (540)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEE
T ss_conf 999999997699999985799899999999999999999849989
No 207
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3- epimerase, D-tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=29.79 E-value=21 Score=13.70 Aligned_cols=97 Identities=16% Similarity=0.168 Sum_probs=50.3
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCEECCCCCC-CCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCC
Q ss_conf 5556765567789988734885325058557-734799999862003433555327856631178887533124752222
Q gi|254780442|r 167 TTQALTQKDREDLHAALQTCEVDWVALSFIQ-SADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGD 245 (480)
Q Consensus 167 ~l~~ltekD~~di~~a~~~~~vD~ialSfVr-~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGD 245 (480)
+..+....-.+.++.+ ++.|+|+|-++.-. +..|..++|+.+.+.+..+.+ +..... ...++.-.+-+|
T Consensus 35 ~~~~~~~~l~~~l~~a-k~~Gfd~VEl~~~~~~~~~~~~lk~~l~~~gL~v~s-~~~~~~--------~~~~~~~~~~~d 104 (290)
T 2zvr_A 35 DALAFKGDLRKGMELA-KRVGYQAVEIAVRDPSIVDWNEVKILSEELNLPICA-IGTGQA--------YLADGLSLTHPN 104 (290)
T ss_dssp ----CHHHHHHHHHHH-HHHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCEEE-EECTHH--------HHTTCCCTTCSS
T ss_pred CCCCCCCCHHHHHHHH-HHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCEEEE-EECCCC--------CCCCCCCCCCCC
T ss_conf 6433577999999999-985999999788894617899999999983990899-845621--------024777778979
Q ss_pred CCHHCCHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 0021587673689999999985139839980
Q gi|254780442|r 246 LGVEMALELIPGIQKKLIRIARQLGKPVVIA 276 (480)
Q Consensus 246 Lg~e~~~e~vp~~Qk~ii~~~~~~~kpvivA 276 (480)
=. . .++--..=++.+..|..+|-++++.
T Consensus 105 ~~--~-r~~~i~~~~~~i~~a~~lG~~~i~~ 132 (290)
T 2zvr_A 105 DE--I-RKKAIERVVKHTEVAGMFGALVIIG 132 (290)
T ss_dssp HH--H-HHHHHHHHHHHHHHHHHHTCEEEES
T ss_pred HH--H-HHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99--9-9999999999999999739937995
No 208
>1ad1_A DHPS, dihydropteroate synthetase; transferase, APO form, complex with OH-CH2-pterin-pyrophosphate; 2.20A {Staphylococcus aureus} SCOP: c.1.21.1 PDB: 1ad4_A*
Probab=29.64 E-value=21 Score=13.68 Aligned_cols=68 Identities=16% Similarity=0.284 Sum_probs=37.4
Q ss_pred CCCEEEEEC--CCCCC-------CHH----HHHHHHHCCCCEEEEE-------CCCCCHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf 752699941--87757-------999----9999997399789998-------888898999999999999999749927
Q gi|254780442|r 5 RRIKIISTL--GPSSF-------SED----VINRLHEEGTDVFRIN-------MSHTSHDKMCELIKKIRAVELRSRRPI 64 (480)
Q Consensus 5 rktKIi~Tl--GPas~-------~~e----~i~~l~~aG~nv~RiN-------~SHg~~e~~~~~i~~ir~~~~~~~~~i 64 (480)
.||||++-| -|-|. +++ ..++|++.|+++.=|- ...-+.|+-.+.+.-+-+...+.+.+
T Consensus 1 ~~t~iMGIlNvTpDSFsdgg~~~~~~~a~~~~~~~i~~GAdiIDIGaeSTrPga~~i~~eeE~~Rl~pvl~~i~~~~~~- 79 (266)
T 1ad1_A 1 TKTKIMGILNVTPDSFSDGGKFNNVESAVTRVKAMMDEGADIIDVGGVSTRPGHEMITVEEELNRVLPVVEAIVGFDVK- 79 (266)
T ss_dssp CCCEEEEEEECCGGGCSSTTTTCSHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSE-
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC-
T ss_conf 9860999982899999988768899999999999998799899979861899998669999998840245554136862-
Q ss_pred EEEEECCCCE
Q ss_conf 9999878986
Q gi|254780442|r 65 GILIDLQGPK 74 (480)
Q Consensus 65 ~Il~Dl~Gpk 74 (480)
|=+||-=|+
T Consensus 80 -iSIDT~~~e 88 (266)
T 1ad1_A 80 -ISVDTFRSE 88 (266)
T ss_dssp -EEEECSCHH
T ss_pred -EEEEECCHH
T ss_conf -446018899
No 209
>1o63_A ATP phosphoribosyltransferase; structural genomics; 2.00A {Thermotoga maritima} SCOP: c.94.1.1 PDB: 1o64_A 1usy_E* 1usy_H*
Probab=29.36 E-value=12 Score=15.40 Aligned_cols=25 Identities=20% Similarity=0.119 Sum_probs=14.8
Q ss_pred HHHHHHHHCCC-CCEEEEECCCHHHH
Q ss_conf 99999861047-86899970883799
Q gi|254780442|r 361 SAARQIAETLR-LSAIFCYTASGATG 385 (480)
Q Consensus 361 ~aav~lA~~l~-a~aIiv~T~sG~tA 385 (480)
.+|+++|-.++ |++|+=.|+||+|.
T Consensus 131 ~GavE~Ap~~G~AD~IVDivsTG~TL 156 (219)
T 1o63_A 131 KGSVELAPIAGLSDLIVDITETGRTL 156 (219)
T ss_dssp SSCTTHHHHHTSCSEEEEEESSSHHH
T ss_pred CCCCCCCCCCCCEEEEEEEECCHHHH
T ss_conf 69776788898321788883575889
No 210
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=29.14 E-value=21 Score=13.62 Aligned_cols=61 Identities=13% Similarity=0.116 Sum_probs=30.9
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCC--CCHHHHHHHHHHHCC-CCEEEEE
Q ss_conf 6446785445556765567789988734885325058557--734799999862003-4335553
Q gi|254780442|r 158 GISFPDTFLTTQALTQKDREDLHAALQTCEVDWVALSFIQ--SADDLLEIRKIISQN-KIGLMSK 219 (480)
Q Consensus 158 gvnip~~~i~l~~ltekD~~di~~a~~~~~vD~ialSfVr--~~~di~~~r~~l~~~-~~~IiaK 219 (480)
+..+|+....-|.+-+.-...+++.++ .+||-+-+-.+. ..+...++++.+.+. ...+++-
T Consensus 193 ~~~l~DLn~~n~~V~~~~~d~~~~w~~-~GvDGfRiDa~khi~~~f~~~~~~~~~~~~~~~~~gE 256 (686)
T 1qho_A 193 GFSLADLSQENGTIAQYLTDAAVQLVA-HGADGLRIDAVKHFNSGFSKSLADKLYQKKDIFLVGE 256 (686)
T ss_dssp TEEEEEBCTTSHHHHHHHHHHHHHHHH-TTCCEEEETTGGGSCHHHHHHHHHHHHHHCCCEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 565751033898999999999999987-0888255215323531457999999862378348888
No 211
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=29.09 E-value=21 Score=13.62 Aligned_cols=42 Identities=19% Similarity=0.328 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECH
Q ss_conf 9999999999988887788779998522278888641599999450
Q gi|254780442|r 429 DMVNRACRIVVEQGFGKPGDRIIISAGLPLGTPGSTNMLRIAYIGA 474 (480)
Q Consensus 429 ~~i~~a~~~l~~~g~i~~GD~VVvv~G~p~~~~G~TN~irv~~Vg~ 474 (480)
..+-.+++.+.+.|.+++||.|++++ +| +|.|=.--++++++
T Consensus 293 asi~~~L~~~~~~g~l~~Gd~vll~s---~G-~G~s~~a~llr~~~ 334 (335)
T 1u6e_A 293 ASIPLAMAELLTTGAAKPGDLALLIG---YG-AGLSYAAQVVRMPK 334 (335)
T ss_dssp GHHHHHHHHHHHHTSSCTTCEEEEEE---EE-TTTEEEEEEEECCC
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEEEE---EC-HHHEEEEEEEEECC
T ss_conf 89999999999749999969999999---92-56150888999778
No 212
>2pfs_A USP, universal stress protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.25A {Nitrosomonas europaea atcc 19718}
Probab=29.07 E-value=21 Score=13.61 Aligned_cols=45 Identities=18% Similarity=0.125 Sum_probs=32.7
Q ss_pred HHHHHHHHHHCCCCCEEEEECCC--------HHHHHHHHHHCCCCCEEEEECCH
Q ss_conf 99999998610478689997088--------37999998418888699992998
Q gi|254780442|r 359 ISSAARQIAETLRLSAIFCYTAS--------GATGLRAARERPKLEIIALSPMI 404 (480)
Q Consensus 359 Ia~aav~lA~~l~a~aIiv~T~s--------G~tA~~iS~~RP~~pIiaiT~~~ 404 (480)
.+...++.|.+.+++.||+-|+. |.++..+.+. .+||++.+=+..
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~lGS~~~~v~~~-s~~pVlvV~~~~ 149 (150)
T 2pfs_A 97 PREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHY-AKCDVLAVRLRD 149 (150)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEC----------CHHHHHHHH-CSSEEEEEEC--
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHC-CCCCEEEECCCC
T ss_conf 89999999986387679872799996526517789999853-698999983699
No 213
>3cu5_A Two component transcriptional regulator, ARAC family; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=28.87 E-value=21 Score=13.59 Aligned_cols=76 Identities=14% Similarity=0.125 Sum_probs=45.0
Q ss_pred HHHHHHCCCCCEEEEECC----CHH-HHHHHHHHCCCCCEEEEECCHHH-HHHHHHHCCCEEEEECCCCCHHHH---HHH
Q ss_conf 999861047868999708----837-99999841888869999299899-987666539379993687999999---999
Q gi|254780442|r 363 ARQIAETLRLSAIFCYTA----SGA-TGLRAARERPKLEIIALSPMIQT-ARRLALVWGIHCVVTEDASDSDDM---VNR 433 (480)
Q Consensus 363 av~lA~~l~a~aIiv~T~----sG~-tA~~iS~~RP~~pIiaiT~~~~t-~r~l~L~~GV~p~~~~~~~~~~~~---i~~ 433 (480)
|.+++.+...+.|++--. +|. .++.+-+..|.+||+.+|-.... ...-.+--|+.-++.++++ .++. ++.
T Consensus 41 al~~~~~~~pdlillDi~MP~~dG~el~~~i~~~~p~~~iI~lT~~~~~~~~~~a~~~Ga~~yl~KP~~-~~~L~~~i~~ 119 (141)
T 3cu5_A 41 AIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPID-PSEIMDALKQ 119 (141)
T ss_dssp HHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSCC-HHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCC-HHHHHHHHHH
T ss_conf 999998679998997368999999999999997587993999978799999999998699989979899-9999999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780442|r 434 ACRIVV 439 (480)
Q Consensus 434 a~~~l~ 439 (480)
+++.+.
T Consensus 120 ~l~~~~ 125 (141)
T 3cu5_A 120 SIQTVL 125 (141)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999
No 214
>1wst_A MSAT, multiple substrate aminotransferase; alpha and beta; HET: PLP; 1.95A {Thermococcus profundus} SCOP: c.67.1.1 PDB: 1x0m_A
Probab=28.73 E-value=22 Score=13.57 Aligned_cols=30 Identities=17% Similarity=0.313 Sum_probs=18.1
Q ss_pred HHHHHHCCCCCCCCEEEEEEEECCCCC-CCCCEEEEEE
Q ss_conf 999998888778877999852227888-8641599999
Q gi|254780442|r 435 CRIVVEQGFGKPGDRIIISAGLPLGTP-GSTNMLRIAY 471 (480)
Q Consensus 435 ~~~l~~~g~i~~GD~VVvv~G~p~~~~-G~TN~irv~~ 471 (480)
.+.+.++| |.++-|..++.. +..|.+|+..
T Consensus 359 ~~~l~~~g-------V~v~PG~~f~~~~~~~~~iRls~ 389 (417)
T 1wst_A 359 MERAVAKG-------VAYVPGEAFFVHRDKKNTMRLNF 389 (417)
T ss_dssp HHHHHHTT-------EECEEGGGGSTTCCCCSEEEEEC
T ss_pred HHHHHHCC-------EEEEECHHHCCCCCCCCEEEEEE
T ss_conf 99999789-------89993366378999899799995
No 215
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphate, external aldimine, chloroplast, plastid; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=28.62 E-value=22 Score=13.56 Aligned_cols=21 Identities=14% Similarity=0.449 Sum_probs=12.1
Q ss_pred EEEEEEECCCCCCCCCEEEEEE
Q ss_conf 9998522278888641599999
Q gi|254780442|r 450 IIISAGLPLGTPGSTNMLRIAY 471 (480)
Q Consensus 450 VVvv~G~p~~~~G~TN~irv~~ 471 (480)
|+++-|..++.. ..+.+|+-.
T Consensus 387 V~v~PG~~F~~~-~~~~iRis~ 407 (432)
T 3ei9_A 387 VVTTPGSGFGPG-GEGFVRVSA 407 (432)
T ss_dssp EECEEGGGGCGG-GTTEEEEEC
T ss_pred EEEEECHHCCCC-CCCEEEEEE
T ss_conf 999814220899-989799997
No 216
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=28.54 E-value=22 Score=13.55 Aligned_cols=46 Identities=15% Similarity=0.180 Sum_probs=30.8
Q ss_pred CCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf 853250585577347999998620034335553278566311788875
Q gi|254780442|r 187 EVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQ 234 (480)
Q Consensus 187 ~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~ 234 (480)
+..|+ |+-==++++|.++.+ ++...+=+=|.+|+..|+++.+.|-+
T Consensus 146 ~~p~~-LAGGl~~~NV~~~~~-~~p~gvDvsSgvE~~~G~KD~~ki~~ 191 (203)
T 1v5x_A 146 GRRVI-LAGGIAPENLEEVLA-LRPYALDLASGVEEAPGVKSAEKLRA 191 (203)
T ss_dssp TSCEE-ECSSCCSTTHHHHHH-HCCSEEEESGGGEEETTEECHHHHHH
T ss_pred HCCEE-EECCCCHHHHHHHHH-CCCCEEEECCCEECCCCCCCHHHHHH
T ss_conf 18789-988889799999996-69988997684177899649999999
No 217
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, protein structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=28.28 E-value=22 Score=13.52 Aligned_cols=56 Identities=20% Similarity=0.165 Sum_probs=38.3
Q ss_pred HHCCCCCEEEEECCCHHHH----HHHHHHCCCCCEEEEECCHHHHHHHHHHCCCEEEEECC
Q ss_conf 6104786899970883799----99984188886999929989998766653937999368
Q gi|254780442|r 367 AETLRLSAIFCYTASGATG----LRAARERPKLEIIALSPMIQTARRLALVWGIHCVVTED 423 (480)
Q Consensus 367 A~~l~a~aIiv~T~sG~tA----~~iS~~RP~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~ 423 (480)
|.--+|+++++.|.+-.+. ..+.+..|..+|++-+.+......|.-. |+..+..+.
T Consensus 67 a~i~~a~~vi~~~~~d~~n~~~~~~~r~l~p~~~iiar~~~~~~~~~l~~~-G~~~vi~~~ 126 (140)
T 3fwz_A 67 AHLECAKWLILTIPNGYEAGEIVASARAKNPDIEIIARAHYDDEVAYITER-GANQVVMGE 126 (140)
T ss_dssp TTGGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEESSHHHHHHHHHT-TCSEEEEHH
T ss_pred HCHHHHCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHC-CCCEEECHH
T ss_conf 274451899998798899999999999978998499998799999999977-989999889
No 218
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=28.21 E-value=22 Score=13.51 Aligned_cols=70 Identities=19% Similarity=0.195 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHC--CCCCEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHH
Q ss_conf 99999999861047868999708837999998418--888699992998999876665393799936879999999
Q gi|254780442|r 358 VISSAARQIAETLRLSAIFCYTASGATGLRAARER--PKLEIIALSPMIQTARRLALVWGIHCVVTEDASDSDDMV 431 (480)
Q Consensus 358 aIa~aav~lA~~l~a~aIiv~T~sG~tA~~iS~~R--P~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~~~~~~~i 431 (480)
+++..|++++.+...+-|.++-. |.+++.++++- +...|+...++..-++.|.-.+|...+.+ ++.++.+
T Consensus 7 Si~s~a~~~~~~~~~kkilvIGa-G~~~~~~a~~L~~~~~~v~v~nRt~~ka~~la~~~~~~~~~~---~~l~~~l 78 (144)
T 3oj0_A 7 SIPSIVYDIVRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLI---NDIDSLI 78 (144)
T ss_dssp SHHHHHHHHHHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEEC---SCHHHHH
T ss_pred EHHHHHHHHHHHCCCCEEEEECC-HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCHHHH---HHHHHHH
T ss_conf 39999999998639999999997-899999999998569846898199999999987505220224---2089999
No 219
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3lb0_A* 3l2i_A* 3nnt_A* 3m7w_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=28.08 E-value=22 Score=13.50 Aligned_cols=32 Identities=19% Similarity=0.290 Sum_probs=14.9
Q ss_pred HHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHH
Q ss_conf 9999998513983998057678888288984034778
Q gi|254780442|r 260 KKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSD 296 (480)
Q Consensus 260 k~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~D 296 (480)
+..+..+++.|..+|++-+-. +..|+..|+..
T Consensus 149 ~~l~~~a~~~~~~vI~S~HdF-----~~tP~~~el~~ 180 (276)
T 3o1n_A 149 KATVGYAHQHNVAVIMSNHDF-----HKTPAAEEIVQ 180 (276)
T ss_dssp HHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECCC-----CCCCCHHHHHH
T ss_conf 999998752596799986148-----89989999999
No 220
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=27.99 E-value=22 Score=13.48 Aligned_cols=169 Identities=15% Similarity=0.142 Sum_probs=93.0
Q ss_pred HHHHHHHHHCC-CEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHH-CCCCEEEEC-------C----CCCCCCCHHHHHHH
Q ss_conf 99999985139-83998057678888288984034778999985-199689981-------4----44354465899999
Q gi|254780442|r 260 KKLIRIARQLG-KPVVIATQMLESMVTSPFPTRAEVSDVATAVF-EEADAIMLS-------A----ETASGSYPVDAVRT 326 (480)
Q Consensus 260 k~ii~~~~~~~-kpvivATq~leSM~~~p~PTRaEv~Dvanav~-dG~D~imLs-------~----ETa~G~yP~~~v~~ 326 (480)
+.|-.....+. +|+|. ..| --.+..|..+++-.+. .|+|++-|. + ..+.|..|..+-+.
T Consensus 623 ~~i~~~k~~~p~~~~Ia-si~-------~~~~~ed~~~la~~~e~~gaD~iElNiScPn~~~~r~~g~~~g~~p~~~~~i 694 (1025)
T 1gte_A 623 QSVTELKADFPDNIVIA-SIM-------CSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694 (1025)
T ss_dssp HHHHHHHHHCTTSEEEE-EEC-------CCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEE-EEC-------CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999875178882697-707-------9999999999999987549998999799999988432231014699999999
Q ss_pred HHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC--------------------------
Q ss_conf 999887630101244444432038788887899999999861047868999708--------------------------
Q gi|254780442|r 327 MSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTA-------------------------- 380 (480)
Q Consensus 327 ~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~-------------------------- 380 (480)
++.+-+.+ +-. ..-+..|..+....+| +.|.+.+|++|+++..
T Consensus 695 ~~~Vr~~~-~iP------v~vKLsP~~tdi~~ia----~aa~~~Gadgv~~iNT~~~~~~id~d~~~~~~~~~~~~~~~G 763 (1025)
T 1gte_A 695 CRWVRQAV-QIP------FFAKLTPNVTDIVSIA----RAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYG 763 (1025)
T ss_dssp HHHHHHHC-SSC------EEEEECSCSSCHHHHH----HHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCE
T ss_pred HHHHHHCC-CCC------EEEECCCCCHHHHHHH----HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99997578-997------8998288816299999----999984998999967777545534333445444555666624
Q ss_pred --CH--------HHHHHHHHHCCCCCEEEEE--CCHHHHHHHHHHCCCEEEEE------CCCCCHHHHHHHHHHHHHHCC
Q ss_conf --83--------7999998418888699992--99899987666539379993------687999999999999999888
Q gi|254780442|r 381 --SG--------ATGLRAARERPKLEIIALS--PMIQTARRLALVWGIHCVVT------EDASDSDDMVNRACRIVVEQG 442 (480)
Q Consensus 381 --sG--------~tA~~iS~~RP~~pIiaiT--~~~~t~r~l~L~~GV~p~~~------~~~~~~~~~i~~a~~~l~~~g 442 (480)
|| +....+++.-|..||++.. .+.+-+-++- .-|-..+.+ ..+.-.+++.+.-.+++.++|
T Consensus 764 GlSG~aikp~aLr~V~~l~~~~~~ipIig~GGI~s~~Da~e~i-~aGAs~VQv~Ta~~~~G~~ii~~i~~gL~~~m~~~g 842 (1025)
T 1gte_A 764 GVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFL-HSGASVLQVCSAVQNQDFTVIQDYCTGLKALLYLKS 842 (1025)
T ss_dssp EEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHH-HTTCSEEEESHHHHTSCTTHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH-HCCCCHHEECHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 1016888899999999999867999799988979999999999-859887501168674096999999999999998739
Q ss_pred CCCCCC
Q ss_conf 877887
Q gi|254780442|r 443 FGKPGD 448 (480)
Q Consensus 443 ~i~~GD 448 (480)
+=.-.|
T Consensus 843 ~~~i~~ 848 (1025)
T 1gte_A 843 IEELQG 848 (1025)
T ss_dssp CGGGTT
T ss_pred CCCHHH
T ss_conf 967898
No 221
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=27.96 E-value=22 Score=13.48 Aligned_cols=67 Identities=10% Similarity=0.063 Sum_probs=33.1
Q ss_pred HHHHCCCCCEEEEEC----CCH-HHHHHHHHHCCCCCEEEEECCH-HHHHHHHHHCCCEEEEECCCCCHHHHHH
Q ss_conf 986104786899970----883-7999998418888699992998-9998766653937999368799999999
Q gi|254780442|r 365 QIAETLRLSAIFCYT----ASG-ATGLRAARERPKLEIIALSPMI-QTARRLALVWGIHCVVTEDASDSDDMVN 432 (480)
Q Consensus 365 ~lA~~l~a~aIiv~T----~sG-~tA~~iS~~RP~~pIiaiT~~~-~t~r~l~L~~GV~p~~~~~~~~~~~~i~ 432 (480)
++......+.|++-= .+| ...+.+.+..|.+||+.+|... .....-.+-.|+..++.++.+ .++.++
T Consensus 45 ~~~~~~~pDlvllDi~mP~~~G~e~~~~ir~~~~~~~iivlt~~~~~~~~~~al~~Ga~~yl~Kp~~-~~~L~~ 117 (153)
T 3cz5_A 45 RLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSSD-PAELVQ 117 (153)
T ss_dssp HHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEETTSC-TTHHHH
T ss_pred HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCEEEECCCC-HHHHHH
T ss_conf 9975469968999645799878999999998589996899981489999999998699838968999-999999
No 222
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=27.95 E-value=22 Score=13.48 Aligned_cols=28 Identities=7% Similarity=0.172 Sum_probs=12.7
Q ss_pred ECCCCEEEEEECCCCCEEECCCCEEEEE
Q ss_conf 8789867886548981896589999995
Q gi|254780442|r 69 DLQGPKFRVGKFANSKVDLTEGQIFTLD 96 (480)
Q Consensus 69 Dl~GpkiR~g~~~~~~i~l~~G~~v~l~ 96 (480)
+.....+....+.+..-.++.-+.+.|+
T Consensus 39 ~~~~~~~~~~~l~~~~~~~~~~~~I~~v 66 (375)
T 2zj3_A 39 NFDDYTVNLGGLKDHIKEIQRCRRLILI 66 (375)
T ss_dssp ETTTTEECCGGGTTTHHHHHHCSEEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCEEEEE
T ss_conf 6443521135356679987259979999
No 223
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=27.82 E-value=22 Score=13.46 Aligned_cols=41 Identities=20% Similarity=0.149 Sum_probs=32.8
Q ss_pred HHHHHHHHHHCCCCCEEEEECC---------CHHHHHHHHHHCCCCCEEEE
Q ss_conf 9999999861047868999708---------83799999841888869999
Q gi|254780442|r 359 ISSAARQIAETLRLSAIFCYTA---------SGATGLRAARERPKLEIIAL 400 (480)
Q Consensus 359 Ia~aav~lA~~l~a~aIiv~T~---------sG~tA~~iS~~RP~~pIiai 400 (480)
.+.+.++.|++.+++.||+-++ .|.++..+.+.- +||++.+
T Consensus 87 ~~~~I~~~a~~~~~dliV~G~~~~s~~~~~~~Gs~~~~vl~~~-~~pVlvV 136 (137)
T 2z08_A 87 PAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEA-PCPVLLV 136 (137)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHC-SSCEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCC-CCCEEEE
T ss_conf 4898998766356888999458998765550373999999706-9989995
No 224
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=27.65 E-value=23 Score=13.44 Aligned_cols=65 Identities=15% Similarity=0.179 Sum_probs=41.8
Q ss_pred EEEECCCHHHHHHHHH--------HCCCCCEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 9997088379999984--------18888699992998999876665393799936879999999999999998888
Q gi|254780442|r 375 IFCYTASGATGLRAAR--------ERPKLEIIALSPMIQTARRLALVWGIHCVVTEDASDSDDMVNRACRIVVEQGF 443 (480)
Q Consensus 375 Iiv~T~sG~tA~~iS~--------~RP~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~~~g~ 443 (480)
.|+|| |.++++...+ ..+.++++++ .+.|++.+.= .|..+..+...-+.+.+++...++++.+|.
T Consensus 213 ~VvFt-Sps~v~~f~~~l~~~~~~~~~~~~i~aI--G~~Ta~~l~~-~G~~~~iva~~pt~e~Ll~aI~~~~~~~~~ 285 (286)
T 1jr2_A 213 SITFF-SPSGLTYSLKHIQELSGDNIDQIKFAAI--GPTTARALAA-QGLPVSCTAESPTPQALATGIRKALQPHGC 285 (286)
T ss_dssp EEEES-SHHHHHHHHHHHHHHHGGGGGGSEEEES--SHHHHHHHHH-TTCCCSEECSSSSHHHHHHHHHHHTC----
T ss_pred EEEEC-CHHHHHHHHHHHHHHHHCCCCCCEEEEE--CHHHHHHHHH-CCCCCEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 99993-9899999999998730324368189998--9999999998-699737997978979999999999875699
No 225
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=27.50 E-value=15 Score=14.67 Aligned_cols=16 Identities=19% Similarity=0.306 Sum_probs=6.0
Q ss_pred HHHHHHHHHEEEEECC
Q ss_conf 7888753312475222
Q gi|254780442|r 229 ASEIIQLSDAVMVARG 244 (480)
Q Consensus 229 l~eI~~~sDgimiaRG 244 (480)
+++|+.--+|++-||+
T Consensus 210 i~~l~~rl~gvl~Ar~ 225 (299)
T 1h3d_A 210 IDKLLTRIQGVIQARE 225 (299)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999996644
No 226
>1vpz_A Carbon storage regulator homolog; NP_249596.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=27.25 E-value=23 Score=13.39 Aligned_cols=29 Identities=17% Similarity=0.350 Sum_probs=20.4
Q ss_pred HHHCCCCCEEEEECCCEEECCCCCCCCEEE
Q ss_conf 221133652674068422102344541124
Q gi|254780442|r 115 FASIKIGDRLLIDDGRVKLCVQEKGIGFIK 144 (480)
Q Consensus 115 ~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~ 144 (480)
.-.-|+|..|.|+| .|.+.|.++.++.++
T Consensus 15 VLtRk~GEsI~Igd-dI~I~Vl~i~g~qVr 43 (73)
T 1vpz_A 15 ILTRRVGETLMVGD-DVTVTVLGVKGNQVR 43 (73)
T ss_dssp EEEEETTCEEEETT-TEEEEEEEEETTEEE
T ss_pred EEEEECCCEEEECC-CEEEEEEEEECCEEE
T ss_conf 99631799899799-989999997099899
No 227
>1zq7_A Hypothetical protein MM0484; X-RAY, NESG, MAR9, Q8PZK8, structural genomics, PSI, protein structure initiative; 2.11A {Methanosarcina mazei} SCOP: d.309.1.1
Probab=27.16 E-value=23 Score=13.38 Aligned_cols=47 Identities=15% Similarity=0.062 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHEEEEECCCCC-H---HCCHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 117888753312475222200-2---1587673689999999985139839
Q gi|254780442|r 227 EYASEIIQLSDAVMVARGDLG-V---EMALELIPGIQKKLIRIARQLGKPV 273 (480)
Q Consensus 227 ~nl~eI~~~sDgimiaRGDLg-~---e~~~e~vp~~Qk~ii~~~~~~~kpv 273 (480)
+++++|.-.-||++|..|+-. + ++..|..+..+..+-..|.++|-|-
T Consensus 118 ~~~~~l~~g~~Glii~~g~~~g~fLP~V~~e~~w~~~~fL~~l~~KAGlp~ 168 (207)
T 1zq7_A 118 ELPDKVEIGKHGLIVKQGYCQGLLLPQVAPENDMDSIDFLSHTCMKAGLSP 168 (207)
T ss_dssp THHHHCCTTTCEEEEEETTEEEEECTTHHHHTTCCHHHHHHHHHHHTTBCG
T ss_pred HCHHHEEEECCEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 666761862246999858854688987452259999999999999669996
No 228
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=26.96 E-value=23 Score=13.36 Aligned_cols=142 Identities=13% Similarity=0.091 Sum_probs=82.6
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCC-CCH--HHHHHHHHHHHHHHHCCHHHHHH------HHHHCCCCCCCHHHHHHHHHH
Q ss_conf 778999985199689981444354-465--89999999988763010124444------443203878888789999999
Q gi|254780442|r 294 VSDVATAVFEEADAIMLSAETASG-SYP--VDAVRTMSLVASSAERDSSWLEM------RSLRRIEPNETGADVISSAAR 364 (480)
Q Consensus 294 v~Dvanav~dG~D~imLs~ETa~G-~yP--~~~v~~~~~i~~~~E~~~~~~~~------~~~~~~~~~~~~~~aIa~aav 364 (480)
..|+..++.-|+||+=+.- .++ ..| .+.++.+.+++.+++.+-.-.-. ....+.. .+...+.+++++
T Consensus 131 ~~~ve~a~rlGaDavk~lv--~i~~~dp~~~~~le~~a~~v~e~~~~glp~mvEp~~~~~~~g~~~-~d~~~e~v~~a~- 206 (307)
T 3fok_A 131 GYNVSSMVDRGVDFAKTLV--RINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVV-NDLSTDAVIQSV- 206 (307)
T ss_dssp SCCHHHHHHHTCCEEEEEE--EECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEE-ECCSHHHHHHHH-
T ss_pred CCCHHHHHHCCCCEEEEEE--EECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC-CCCCHHHHHHHH-
T ss_conf 3479999972899799998--747999436999999999999999759966998765125888656-778889999999-
Q ss_pred HHHHCCCCCEEEE---ECCCHHHHHHHHHHCCCCCEEEE----E-CCHHHHHHHH--HH-CCCEEEEEC------CCCCH
Q ss_conf 9861047868999---70883799999841888869999----2-9989998766--65-393799936------87999
Q gi|254780442|r 365 QIAETLRLSAIFC---YTASGATGLRAARERPKLEIIAL----S-PMIQTARRLA--LV-WGIHCVVTE------DASDS 427 (480)
Q Consensus 365 ~lA~~l~a~aIiv---~T~sG~tA~~iS~~RP~~pIiai----T-~~~~t~r~l~--L~-~GV~p~~~~------~~~~~ 427 (480)
.+|..|+++.+-+ .-..+.+.+.+... .+|++.. + ..+.++.++. |- .|+.-+.+- ...|.
T Consensus 207 riAaeLGadivkt~lk~p~~~~~~~V~~a~--~~Pvli~GG~~~~d~e~~l~~~~~Al~~~Ga~G~~~GRnv~~~~~~d~ 284 (307)
T 3fok_A 207 AIAAGLGNDSSYTWMKLPVVEEMERVMEST--TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDV 284 (307)
T ss_dssp HHHHTCSSCCSSEEEEEECCTTHHHHGGGC--SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCH
T ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHC--CCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCH
T ss_conf 999985767010357789853699999716--987899669988999999999999997079808988712366898999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999999988
Q gi|254780442|r 428 DDMVNRACRIVVEQ 441 (480)
Q Consensus 428 ~~~i~~a~~~l~~~ 441 (480)
..+++.+...+-+.
T Consensus 285 ~~~v~~~~~ivH~~ 298 (307)
T 3fok_A 285 AAAVDTAARLVHTD 298 (307)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHCCC
T ss_conf 99999999985605
No 229
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver domain, target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=26.42 E-value=24 Score=13.29 Aligned_cols=57 Identities=16% Similarity=0.141 Sum_probs=30.7
Q ss_pred CHH-HHHHHHHHCCCCCEEEEECCHHH-HHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 837-99999841888869999299899-98766653937999368799999999999999
Q gi|254780442|r 381 SGA-TGLRAARERPKLEIIALSPMIQT-ARRLALVWGIHCVVTEDASDSDDMVNRACRIV 438 (480)
Q Consensus 381 sG~-tA~~iS~~RP~~pIiaiT~~~~t-~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l 438 (480)
+|. ..+.+-...|..||+.+|-.... ...-.+--|+.-++.+++ +.++........+
T Consensus 63 ~G~~l~~~~~~~~~~~pvI~lT~~~~~~~~~~a~~~Ga~dyl~KP~-~~~~L~~~i~~~l 121 (143)
T 3jte_A 63 SGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKPV-TAQDLSIAINNAI 121 (143)
T ss_dssp CHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEESSC-CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHHHH
T ss_conf 8899999999878999699998889999999999869989982899-9999999999999
No 230
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=26.27 E-value=24 Score=13.27 Aligned_cols=114 Identities=21% Similarity=0.227 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCC--CCEEE-EEECCHHHHHHHHHHHHHHHEEEEECCCCCH
Q ss_conf 65567789988734885325058557734799999862003--43355-5327856631178887533124752222002
Q gi|254780442|r 172 TQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQN--KIGLM-SKIEKPRAIEYASEIIQLSDAVMVARGDLGV 248 (480)
Q Consensus 172 tekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~--~~~Ii-aKIE~~~al~nl~eI~~~sDgimiaRGDLg~ 248 (480)
+..|-..+--++.+++++.+-+.+- ++.-.+.++++..+. ++.|= -.+-+.+-++..- -..+|.+ |
T Consensus 17 ~~~~a~~~a~al~~~Gi~~iEitl~-tp~a~~~i~~l~~~~~~~~~vGaGTV~~~~~~~~a~--~aGA~Fi-v------- 85 (212)
T 2v82_A 17 TPDEALAHVGAVIDAGFDAVEIPLN-SPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALA--RMGCQLI-V------- 85 (212)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEETT-STTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHH--HTTCCEE-E-------
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECC-CCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH--HCCCCEE-E-------
T ss_conf 9999999999999869998999579-934999999999966875078530222478899998--5489789-8-------
Q ss_pred HCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHH
Q ss_conf 1587673689999999985139839980576788882889840347789999851996899814443544658999
Q gi|254780442|r 249 EMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAV 324 (480)
Q Consensus 249 e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v 324 (480)
-|..-..+++.|+++|.|.|.... -.+++..|...|+|.+=+ ||.+.+
T Consensus 86 ------sP~~~~~v~~~a~~~~i~~iPGv~--------------TpsEi~~A~~~G~~~vK~--------FPa~~~ 133 (212)
T 2v82_A 86 ------TPNIHSEVIRRAVGYGMTVCPGCA--------------TATEAFTALEAGAQALKI--------FPSSAF 133 (212)
T ss_dssp ------CSSCCHHHHHHHHHTTCEEECEEC--------------SHHHHHHHHHTTCSEEEE--------TTHHHH
T ss_pred ------CCCCCHHHHHHHHHCCCCCCCCCC--------------CHHHHHHHHHCCCCEEEE--------CCCCCC
T ss_conf ------998998999999975876338848--------------769999999829885863--------253435
No 231
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum str} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=26.15 E-value=21 Score=13.63 Aligned_cols=19 Identities=21% Similarity=0.226 Sum_probs=11.2
Q ss_pred HHHHHHHHHHCCCEEEEEC
Q ss_conf 8999876665393799936
Q gi|254780442|r 404 IQTARRLALVWGIHCVVTE 422 (480)
Q Consensus 404 ~~t~r~l~L~~GV~p~~~~ 422 (480)
..++-++.+.+|+.|.-.+
T Consensus 274 qlls~~lA~~~GiDP~~~~ 292 (302)
T 1tzb_A 274 GIASVKLAEIRGVNPLATP 292 (302)
T ss_dssp HHHHHHHHHHHTCCSSCCH
T ss_pred HHHHHHHHHHCCCCCCCCC
T ss_conf 9999999998599988786
No 232
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=26.10 E-value=24 Score=13.25 Aligned_cols=15 Identities=27% Similarity=0.337 Sum_probs=6.6
Q ss_pred HHHHHHHHCCCEEEE
Q ss_conf 999998513983998
Q gi|254780442|r 261 KLIRIARQLGKPVVI 275 (480)
Q Consensus 261 ~ii~~~~~~~kpviv 275 (480)
++++.|..+|+|+.+
T Consensus 262 ~i~~~a~~~gi~~~~ 276 (324)
T 1jpd_X 262 ALATEARAQGFSLML 276 (324)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCEEEE
T ss_conf 999999987991997
No 233
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, cytoplasm, histidine, magnesium; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=26.08 E-value=18 Score=14.15 Aligned_cols=14 Identities=7% Similarity=0.071 Sum_probs=6.1
Q ss_pred HHHHCCCCCEEEEE
Q ss_conf 98610478689997
Q gi|254780442|r 365 QIAETLRLSAIFCY 378 (480)
Q Consensus 365 ~lA~~l~a~aIiv~ 378 (480)
+--..++|+.|+++
T Consensus 269 ~~L~~~GA~~Ilv~ 282 (289)
T 2vd3_A 269 NRLKAVGARDILVV 282 (289)
T ss_dssp HHHHTTTCEEEEEE
T ss_pred HHHHHCCCCEEEEE
T ss_conf 99998499858997
No 234
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=26.06 E-value=24 Score=13.25 Aligned_cols=56 Identities=14% Similarity=0.072 Sum_probs=34.5
Q ss_pred CCCEEEEE-ECCCCCEEEC-CCCEEEEECCCCCCCCCCCCCCCCCC-HHHCCCCCEEEE
Q ss_conf 89867886-5489818965-89999995324556444221266442-221133652674
Q gi|254780442|r 71 QGPKFRVG-KFANSKVDLT-EGQIFTLDNKDSLGSSDRVMLPHPEI-FASIKIGDRLLI 126 (480)
Q Consensus 71 ~GpkiR~g-~~~~~~i~l~-~G~~v~l~~~~~~~~~~~i~i~y~~l-~~~ik~Gd~I~i 126 (480)
++.++|+| ....+.+.-. .|-.+.|...+..++...+.|.|.+. +...+.|..+.+
T Consensus 7 ~~~~vRvgG~V~~gSi~~~~~~~~~~F~itD~~~~~~~i~V~Y~G~~PdlF~eg~~VVv 65 (94)
T 2kct_A 7 KLHTVRLFGTVAADGLTMLDGAPGVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGVEVII 65 (94)
T ss_dssp TTCCEEEEEEECSTTCEECTTSSEEEEEEECSSCTTCEEEEEEESCCCTTCCTTCEEEE
T ss_pred CCCEEEEEEEEECCCEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHCCCEEEE
T ss_conf 78779980599689399889996889999976688669999988879658738997999
No 235
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=25.99 E-value=24 Score=13.24 Aligned_cols=14 Identities=14% Similarity=0.439 Sum_probs=5.8
Q ss_pred HHHHHHHCCCEEEE
Q ss_conf 99998513983998
Q gi|254780442|r 262 LIRIARQLGKPVVI 275 (480)
Q Consensus 262 ii~~~~~~~kpviv 275 (480)
.+....+.+.|.|+
T Consensus 153 ~~~~l~~~~~~~i~ 166 (284)
T 2hx1_A 153 TVNLLRKRTIPAIV 166 (284)
T ss_dssp HHHHHHHCCCCEEE
T ss_pred HHHHHHHHCCCEEE
T ss_conf 99998750543798
No 236
>1ltk_A Phosphoglycerate kinase; PGK, glycolysis, glycerol, open conformation, ADP complex, selenomethionine, transferase; HET: AMP; 3.00A {Plasmodium falciparum} SCOP: c.86.1.1
Probab=25.91 E-value=12 Score=15.36 Aligned_cols=314 Identities=13% Similarity=0.151 Sum_probs=145.3
Q ss_pred CHHHHHHHHHCCCCEEEEECCC-----CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEE--EECCCCCEEECCCC
Q ss_conf 9999999997399789998888-----8989999999999999997499279999878986788--65489818965899
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSH-----TSHDKMCELIKKIRAVELRSRRPIGILIDLQGPKFRV--GKFANSKVDLTEGQ 91 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SH-----g~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~GpkiR~--g~~~~~~i~l~~G~ 91 (480)
+..+|+.|++.|.+-.=| +|| |..++...+-.-.+.+++.++++|...-|.-|++.+. ..++++.|.|-++=
T Consensus 52 ~lpTI~~L~~~ga~kvil-~SHlGRP~g~~~~~~SL~pva~~L~~~L~~~V~fv~d~~g~~~~~~i~~l~~g~I~LLENv 130 (425)
T 1ltk_A 52 TLPTINHLKKEGASKIIL-ISHCGRPDGLRNEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENL 130 (425)
T ss_dssp THHHHHHHHTTCCSEEEE-ECCCSCCTTSCCGGGCSHHHHHHHHHHHTSCCEECSCSSSHHHHHHHHSSCTTEEEECCCG
T ss_pred HHHHHHHHHHCCCCEEEE-EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCE
T ss_conf 999999999879982999-8188899998899845699999999987877611366667267777532798878986011
Q ss_pred EEEEECCCCCCC----CCCC---CCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEECCCCCCCCCC
Q ss_conf 999953245564----4422---126644222113365267406842210234454112455138808711456446785
Q gi|254780442|r 92 IFTLDNKDSLGS----SDRV---MLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKVIAGISIADRKGISFPDT 164 (480)
Q Consensus 92 ~v~l~~~~~~~~----~~~i---~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvnip~~ 164 (480)
+|...+...+ .... .-+.+.|.+.+...-.+|++|..=. --..--++ -|+ |..
T Consensus 131 --RF~~eE~~n~~~~~~~~~~~~~~~~~~f~k~LA~laDvyVNDAF~~---aHR~haS~-------------~gi--~~~ 190 (425)
T 1ltk_A 131 --RFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGT---AHRAHSSM-------------VGV--KLN 190 (425)
T ss_dssp --GGSHHHHSEEECTTCCEEECCHHHHHHHHHHHHTSCSEEEEECTTS---CSSCCHHH-------------HCC--CCS
T ss_pred --EECCHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCEEEECCCCC---CCCCCCCE-------------ECC--CCC
T ss_conf --1020000256420010110112337999999864167876145543---45566532-------------210--001
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHC-CC--CEEE--EEECCHHHHHHHHHHHHHHHEE
Q ss_conf 44555676556778998873488532505855773479999986200-34--3355--5327856631178887533124
Q gi|254780442|r 165 FLTTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQ-NK--IGLM--SKIEKPRAIEYASEIIQLSDAV 239 (480)
Q Consensus 165 ~i~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~-~~--~~Ii--aKIE~~~al~nl~eI~~~sDgi 239 (480)
.-..-.|-+ +.+..+.+.+.. .+ +-|+ |||+++-.+ ++..++.+|.+
T Consensus 191 ~~~aG~L~e--------------------------kEi~~L~k~l~~~~~P~vaIlGGaKvsdKi~~--i~~l~~k~D~i 242 (425)
T 1ltk_A 191 VKASGFLMK--------------------------KELEYFSKALENPQRPLLAILGGAKVSDKIQL--IKNLLDKVDRM 242 (425)
T ss_dssp EEEECHHHH--------------------------HHHHHHHHHHTSCCSSEEEEEECSCSGGGHHH--HHHHHTTCSEE
T ss_pred CCCCHHHHH--------------------------HHHHHHHHHHHCCCCCCEEEEECCCCCHHHHH--HHHHHHHCCEE
T ss_conf 354304699--------------------------99999999984878884699837741207999--99888624728
Q ss_pred EEECC--------CCCHHCC----HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH-HCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 75222--------2002158----767368999999998513983998057678888-2889840347789999851996
Q gi|254780442|r 240 MVARG--------DLGVEMA----LELIPGIQKKLIRIARQLGKPVVIATQMLESMV-TSPFPTRAEVSDVATAVFEEAD 306 (480)
Q Consensus 240 miaRG--------DLg~e~~----~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~-~~p~PTRaEv~Dvanav~dG~D 306 (480)
++.=| -.|.+++ -++.-..-+.++.++.+.+++++.-....-+=. ++...++ ++.+.. .+-++
T Consensus 243 iigG~~antfL~a~~g~~ig~s~~e~~~~~~a~~i~~~ak~~~~~i~lP~d~~~~~~~~~~~~~~-~~~~~~-~i~~~-- 318 (425)
T 1ltk_A 243 IIGGGMAYTFKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTK-FVTDEE-GIPDN-- 318 (425)
T ss_dssp EEESSHHHHHHHHHHCCCCTTSCCCTTGGGTHHHHHHHHHHTTCEEECCSEEEEESSSSSSSCEE-EEETTT-CCCTT--
T ss_pred EECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC-EECCCC-CCCCC--
T ss_conf 96427999999970388668533246677999999999986299534567637620456777830-761455-77653--
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf 89981444354465899999999887630101244444432038788887899999999861047868999708837999
Q gi|254780442|r 307 AIMLSAETASGSYPVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASGATGL 386 (480)
Q Consensus 307 ~imLs~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG~tA~ 386 (480)
...|- +| -++++...+++..+.. ..|.-.-...+..+-...+.+++.+..+.+. -++-.|+ --|.|+.
T Consensus 319 ~~ilD----IG---~~Ti~~~~~~I~~a~t-I~wNGP~GvfE~~~F~~GT~~i~~~i~~~t~-~~a~siv---GGGdT~a 386 (425)
T 1ltk_A 319 WMGLD----AG---PKSIENYKDVILTSKT-VIWNGPQGVFEMPNFAKGSIECLNLVVEVTK-KGAITIV---GGGDTAS 386 (425)
T ss_dssp CEEEE----EC---HHHHHHHHHHHHTCSE-EEEESCSSCTTSGGGCHHHHHHHHHHHHHHH-TTCEEEE---CCSTTHH
T ss_pred CEEEE----CC---HHHHHHHHHHHCCCCE-EEEECCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCEEEE---ECHHHHH
T ss_conf 33441----36---2778999998562888-9997986654576054899999999998841-7997999---4879999
Q ss_pred HHHHHCCCCCE
Q ss_conf 99841888869
Q gi|254780442|r 387 RAARERPKLEI 397 (480)
Q Consensus 387 ~iS~~RP~~pI 397 (480)
.+.++-..-.+
T Consensus 387 ai~~~g~~~~~ 397 (425)
T 1ltk_A 387 LVEQQNKKNEI 397 (425)
T ss_dssp HHHHHTCGGGS
T ss_pred HHHHCCCCCCC
T ss_conf 99974985698
No 237
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protein structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=25.76 E-value=16 Score=14.62 Aligned_cols=19 Identities=11% Similarity=0.076 Sum_probs=9.6
Q ss_pred HHHHHHHHCCCCCEEEEEC
Q ss_conf 9999986104786899970
Q gi|254780442|r 361 SAARQIAETLRLSAIFCYT 379 (480)
Q Consensus 361 ~aav~lA~~l~a~aIiv~T 379 (480)
...+.--..++|..|+++-
T Consensus 280 ~~~i~~Lk~~GA~~Ilv~p 298 (304)
T 1nh8_A 280 NGIMDELAAIGAKAILASD 298 (304)
T ss_dssp HHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHCCCCEEEEEE
T ss_conf 9999999985998599951
No 238
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 1g6c_A* 1g4e_A* 1g69_A* 1g4s_A* 1g4p_A* 1g67_A*
Probab=25.68 E-value=24 Score=13.20 Aligned_cols=56 Identities=11% Similarity=0.212 Sum_probs=34.6
Q ss_pred EEEEECCCCC---CCHHHHHHHHHCCCCEEEEECC---CCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 6999418775---7999999999739978999888---889899999999999999974992
Q gi|254780442|r 8 KIISTLGPSS---FSEDVINRLHEEGTDVFRINMS---HTSHDKMCELIKKIRAVELRSRRP 63 (480)
Q Consensus 8 KIi~TlGPas---~~~e~i~~l~~aG~nv~RiN~S---Hg~~e~~~~~i~~ir~~~~~~~~~ 63 (480)
++..-.+|.. +..+.+++.+++|++++.+-.= ..+.++..+..+.++++.+..+.+
T Consensus 19 ~~Y~I~~~~~~~~~~~~~v~~al~~Gv~~vqlR~K~~~~~~~~~~~~la~~l~~~~~~~~~~ 80 (227)
T 2tps_A 19 SVYFIMGSNNTKADPVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVP 80 (227)
T ss_dssp TEEEEECGGGCSSCHHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCE
T ss_conf 89999895323568899999999889989998679988688999999999999999982997
No 239
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=25.66 E-value=24 Score=13.19 Aligned_cols=71 Identities=17% Similarity=0.169 Sum_probs=39.5
Q ss_pred HCCCCCEEEEEC----CCHHHHHHHHHHCCCCCEEEEECCHHHH-HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 104786899970----8837999998418888699992998999-87666539379993687999999999999999
Q gi|254780442|r 368 ETLRLSAIFCYT----ASGATGLRAARERPKLEIIALSPMIQTA-RRLALVWGIHCVVTEDASDSDDMVNRACRIVV 439 (480)
Q Consensus 368 ~~l~a~aIiv~T----~sG~tA~~iS~~RP~~pIiaiT~~~~t~-r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~ 439 (480)
.+-.-+.|+.-- .+|.....--+..+..||+.+|...... +.-.+-.|+..++.+++ +.++........++
T Consensus 42 ~~~~~dliilD~~mp~~dG~~~l~~~~~~~~~pvi~lt~~~~~~~~~~a~~~Ga~d~l~KP~-~~~~L~~~i~~~lr 117 (120)
T 2a9o_A 42 EAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDSEFDKVIGLELGADDYVTKPF-SNRELQARVKALLR 117 (120)
T ss_dssp HHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSC-CHHHHHHHHHHHHH
T ss_pred HHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHHHHH
T ss_conf 85799899982999998999999998865998199997989999999999879989998989-99999999999997
No 240
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor}
Probab=25.51 E-value=24 Score=13.18 Aligned_cols=71 Identities=17% Similarity=0.153 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHEEEEEC---CCCCHHCCHHHHHHHHHHHHHHHHHC-CCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 311788875331247522---22002158767368999999998513-98399805767888828898403477899998
Q gi|254780442|r 226 IEYASEIIQLSDAVMVAR---GDLGVEMALELIPGIQKKLIRIARQL-GKPVVIATQMLESMVTSPFPTRAEVSDVATAV 301 (480)
Q Consensus 226 l~nl~eI~~~sDgimiaR---GDLg~e~~~e~vp~~Qk~ii~~~~~~-~kpvivATq~leSM~~~p~PTRaEv~Dvanav 301 (480)
-+.+..|.+.++|.+-.= |=-|...++. .--+..+++.+++ .+|+.+-. -.-|+ .|+..++
T Consensus 163 ~~Ri~~i~~~a~gfiY~vs~~GvTG~~~~~~---~~~~~~i~~ik~~t~~Pv~vGF---------GI~~~---e~v~~~~ 227 (271)
T 3nav_A 163 DETLRAVAQLGKGYTYLLSRAGVTGAETKAN---MPVHALLERLQQFDAPPALLGF---------GISEP---AQVKQAI 227 (271)
T ss_dssp HHHHHHHHHHCCSCEEECCCC--------CC---HHHHHHHHHHHHTTCCCEEECS---------SCCSH---HHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCCCC---CHHHHHHHHHHHCCCCCEEEEE---------EECCH---HHHHHHH
T ss_conf 8899999861887389850555678776665---0289999987533689728983---------01889---9999998
Q ss_pred HCCCCEEEEC
Q ss_conf 5199689981
Q gi|254780442|r 302 FEEADAIMLS 311 (480)
Q Consensus 302 ~dG~D~imLs 311 (480)
..|+||+...
T Consensus 228 ~~~ADGvVVG 237 (271)
T 3nav_A 228 EAGAAGAISG 237 (271)
T ss_dssp HTTCSEEEES
T ss_pred HCCCCEEEEC
T ss_conf 7389999988
No 241
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol- phosphate, lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=25.50 E-value=24 Score=13.17 Aligned_cols=71 Identities=18% Similarity=0.255 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHEEEEE---CCCCCHHCCHHHHHHHHHHHHHHHHHC-CCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 31178887533124752---222002158767368999999998513-98399805767888828898403477899998
Q gi|254780442|r 226 IEYASEIIQLSDAVMVA---RGDLGVEMALELIPGIQKKLIRIARQL-GKPVVIATQMLESMVTSPFPTRAEVSDVATAV 301 (480)
Q Consensus 226 l~nl~eI~~~sDgimia---RGDLg~e~~~e~vp~~Qk~ii~~~~~~-~kpvivATq~leSM~~~p~PTRaEv~Dvanav 301 (480)
-+.+.+|.+.+.|.+-. .|==|.+.+ ++.-.+..+++.+++ .+|+.+-. -.-|+. |+....
T Consensus 156 ~~ri~~i~~~a~gfIY~vs~~GvTG~~~~---~~~~~~~~i~~ir~~t~~Pi~vGF---------GI~~~e---~v~~~~ 220 (262)
T 1rd5_A 156 EDRMKEITKASEGFVYLVSVNGVTGPRAN---VNPRVESLIQEVKKVTNKPVAVGF---------GISKPE---HVKQIA 220 (262)
T ss_dssp HHHHHHHHHHCCSCEEEECSSCCBCTTSC---BCTHHHHHHHHHHHHCSSCEEEES---------CCCSHH---HHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCCCC---CCCHHHHHHHHHHHCCCCCEEEEE---------CCCCHH---HHHHHH
T ss_conf 87888763269862786303464221221---210278899987513688779992---------789999---999998
Q ss_pred HCCCCEEEEC
Q ss_conf 5199689981
Q gi|254780442|r 302 FEEADAIMLS 311 (480)
Q Consensus 302 ~dG~D~imLs 311 (480)
..|+||+...
T Consensus 221 ~~gADGvVVG 230 (262)
T 1rd5_A 221 QWGADGVIIG 230 (262)
T ss_dssp HTTCSEEEEC
T ss_pred HCCCCEEEEC
T ss_conf 5499999988
No 242
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=25.33 E-value=24 Score=13.22 Aligned_cols=36 Identities=14% Similarity=0.304 Sum_probs=28.4
Q ss_pred EEEEEC-CCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHH
Q ss_conf 699941-87757999999999739978999888889899999
Q gi|254780442|r 8 KIISTL-GPSSFSEDVINRLHEEGTDVFRINMSHTSHDKMCE 48 (480)
Q Consensus 8 KIi~Tl-GPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~~~~ 48 (480)
+|+.|| |||.+-..++.+++-. ++||.|-+.-..-.
T Consensus 16 ~i~IaIDGPagsGKsT~Ak~LAk-----~lg~~~ldTG~lYR 52 (236)
T 1q3t_A 16 TIQIAIDGPASSGKSTVAKIIAK-----DFGFTYLDTGAMYR 52 (236)
T ss_dssp CCEEEEECSSCSSHHHHHHHHHH-----HHCCEEEEHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHH-----HHCCCEECHHHHHH
T ss_conf 73899889997788999999999-----93995888369999
No 243
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A, structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii OT3}
Probab=25.27 E-value=25 Score=13.14 Aligned_cols=43 Identities=21% Similarity=0.226 Sum_probs=32.7
Q ss_pred HHHHHHHHHHCCCCCEEEEECC---------CHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 9999999861047868999708---------8379999984188886999929
Q gi|254780442|r 359 ISSAARQIAETLRLSAIFCYTA---------SGATGLRAARERPKLEIIALSP 402 (480)
Q Consensus 359 Ia~aav~lA~~l~a~aIiv~T~---------sG~tA~~iS~~RP~~pIiaiT~ 402 (480)
.+.+.++.|.+.+++.||+-++ -|.++..+.+.- +||++.+-+
T Consensus 105 ~~~~I~~~a~~~~~DliVmG~~g~~~~~~~l~GS~~~~vl~~~-~~pVLvV~~ 156 (170)
T 2dum_A 105 PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKT-KKPVLIIKE 156 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHC-SSCEEEECC
T ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCCCCCEECCHHHHHHHHC-CCCEEEECC
T ss_conf 7885201202565678998058999664450375999999709-999999768
No 244
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4S cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=25.25 E-value=25 Score=13.14 Aligned_cols=67 Identities=10% Similarity=-0.001 Sum_probs=34.2
Q ss_pred HHHHHC-CCCCEEEEECCHHHHHHHH----HHCCCEEEEE--CCCCCHHHHHHH---HHHHHHHCCCCCC-CCEEEEE
Q ss_conf 998418-8886999929989998766----6539379993--687999999999---9999998888778-8779998
Q gi|254780442|r 387 RAARER-PKLEIIALSPMIQTARRLA----LVWGIHCVVT--EDASDSDDMVNR---ACRIVVEQGFGKP-GDRIIIS 453 (480)
Q Consensus 387 ~iS~~R-P~~pIiaiT~~~~t~r~l~----L~~GV~p~~~--~~~~~~~~~i~~---a~~~l~~~g~i~~-GD~VVvv 453 (480)
.+..-+ |...-+.+|++....|++- ...|+..-.. .+..+.++.+.. .++.+.+.|++.. ++.+.+|
T Consensus 349 ~i~~g~~~~~~g~~ls~~d~~r~~ii~~L~~~~~ld~~~~~~~fg~~~~~~f~~~~~~L~~l~~~GLv~~~~~~i~lT 426 (457)
T 1olt_A 349 QVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYSPIEQQWDLLFADYFAEDLKLLAPLAKDGLVDVDEKGIQVT 426 (457)
T ss_dssp HHHHHSCCEEEEEECCHHHHHHHHHHHHHHHHSEEEHHHHHHHTTCCHHHHTHHHHHHHHHHHHTTSEEECSSEEEEC
T ss_pred HHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEEEC
T ss_conf 998479952403468988999999999899838928799999979788898799999999999789899989999999
No 245
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=25.06 E-value=25 Score=13.12 Aligned_cols=15 Identities=7% Similarity=0.073 Sum_probs=6.5
Q ss_pred HHHHHHHHCCCCEEE
Q ss_conf 789999851996899
Q gi|254780442|r 295 SDVATAVFEEADAIM 309 (480)
Q Consensus 295 ~Dvanav~dG~D~im 309 (480)
+||.-|-.-|.++++
T Consensus 244 tDI~gA~~aG~~sil 258 (306)
T 2oyc_A 244 TDILFGHRCGMTTVL 258 (306)
T ss_dssp THHHHHHHHTCEEEE
T ss_pred HHHHHHHHCCCCEEE
T ss_conf 789999987995999
No 246
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=24.86 E-value=25 Score=13.09 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=25.2
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 775269994187757999999999739978999888889
Q gi|254780442|r 4 LRRIKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTS 42 (480)
Q Consensus 4 mrktKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~ 42 (480)
..+.|||+-+||+..-+.+|.+.+..--.-+.+--+|.|
T Consensus 17 ~~~gkiivi~GpsGsGK~Tl~~~L~~~~~~~~~~v~~tT 55 (207)
T 1znw_A 17 AAVGRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATT 55 (207)
T ss_dssp --CCCEEEEECSTTSSHHHHHHHHHHHSTTCEECCCEES
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 779808999898988999999999966899717764437
No 247
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=24.74 E-value=25 Score=13.08 Aligned_cols=22 Identities=18% Similarity=0.227 Sum_probs=9.3
Q ss_pred HHHHHHHCC-CCEEEEEECCCCE
Q ss_conf 999999749-9279999878986
Q gi|254780442|r 53 IRAVELRSR-RPIGILIDLQGPK 74 (480)
Q Consensus 53 ir~~~~~~~-~~i~Il~Dl~Gpk 74 (480)
||++.++.+ .|.=-++|+.+.+
T Consensus 513 vr~~R~~~~i~p~yk~VDtcAgE 535 (1073)
T 1a9x_A 513 IRKLRDQYDLHPVYKRVDTCAAE 535 (1073)
T ss_dssp HHHHHHHTTCCCEEEECCSBTTS
T ss_pred HHHHHHHCCCCCEEEECCCCCCC
T ss_conf 99999974997158851443443
No 248
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=24.55 E-value=25 Score=13.05 Aligned_cols=41 Identities=17% Similarity=0.278 Sum_probs=29.8
Q ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHC-CCCEEEEECCCCC
Q ss_conf 7777526999418775799999999973-9978999888889
Q gi|254780442|r 2 VNLRRIKIISTLGPSSFSEDVINRLHEE-GTDVFRINMSHTS 42 (480)
Q Consensus 2 ~~mrktKIi~TlGPas~~~e~i~~l~~a-G~nv~RiN~SHg~ 42 (480)
|+-+|-+||+=+|||..-..+|.+.+.. --+.|+.--+|+|
T Consensus 1 m~~~~g~iivi~GpsGsGK~tl~~~L~~~~~~~~~~~v~~TT 42 (207)
T 2j41_A 1 MDNEKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTT 42 (207)
T ss_dssp ---CCCCEEEEECSTTSCHHHHHHHHHHCTTCCEECCCCEEC
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEC
T ss_conf 989887299999999999999999998459745135478867
No 249
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cancer cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=24.33 E-value=26 Score=13.02 Aligned_cols=117 Identities=18% Similarity=0.091 Sum_probs=55.5
Q ss_pred HHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 99998513983998057678888288984034778999985199689981444354465899999999887630101244
Q gi|254780442|r 262 LIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTMSLVASSAERDSSWL 341 (480)
Q Consensus 262 ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~ 341 (480)
+-..|+.+|-|+++- |-.+..+.+- ...-..|++-+. +|....++.....+..++.- ++
T Consensus 69 lA~~a~~~G~~~~i~------~p~~~~~~k~-----~~~~~~Ga~v~~------~~~~~~~~~~~~~~~~~~~~---~~- 127 (318)
T 2rkb_A 69 AAYAARKLGIPATIV------LPESTSLQVV-----QRLQGEGAEVQL------TGKVWDEANLRAQELAKRDG---WE- 127 (318)
T ss_dssp HHHHHHHHTCCEEEE------ECTTCCHHHH-----HHHHHTTCEEEE------CCSSHHHHHHHHHHHHHSTT---EE-
T ss_pred HHHHHHHCCCCEEEC------CCCCCCHHHH-----HHHHHCCCEEEE------CCCCHHHHHHHHHHHHHHCC---CE-
T ss_conf 999999839823512------6765626678-----888605967853------38756777789999998539---88-
Q ss_pred HHHHHHCCCCCCCH--HHHHHHHHHHHHHCCC--CCEEEEECCCHHHHH-----HHHHHCCCCCEEEEECCHH
Q ss_conf 44443203878888--7899999999861047--868999708837999-----9984188886999929989
Q gi|254780442|r 342 EMRSLRRIEPNETG--ADVISSAARQIAETLR--LSAIFCYTASGATGL-----RAARERPKLEIIALSPMIQ 405 (480)
Q Consensus 342 ~~~~~~~~~~~~~~--~~aIa~aav~lA~~l~--a~aIiv~T~sG~tA~-----~iS~~RP~~pIiaiT~~~~ 405 (480)
...+..+. ...-...+.++...++ .+.+++..-+|.+.. ......|.++|+++.+...
T Consensus 128 ------~~~~~~~~~~~~G~~t~~~Ei~~ql~~~~d~~v~~~ggGg~~~g~~~~~~~~~~~~~~ii~ve~~~~ 194 (318)
T 2rkb_A 128 ------NVPPFDHPLIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHGA 194 (318)
T ss_dssp ------ECCSSCSHHHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETTB
T ss_pred ------EECCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf ------5225688788842455525899983887626987067886077888999985599856984135677
No 250
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein structure initiative; 2.30A {Brucella melitensis 16M}
Probab=24.32 E-value=26 Score=13.02 Aligned_cols=196 Identities=16% Similarity=0.150 Sum_probs=102.2
Q ss_pred CCCHHHHHHHHHHHHCCCCCEECC-CCCCCCH-----HHHHHH-HHHHCCCCEEEEEECCHHHHHHHHHHHHHHH--EEE
Q ss_conf 676556778998873488532505-8557734-----799999-8620034335553278566311788875331--247
Q gi|254780442|r 170 ALTQKDREDLHAALQTCEVDWVAL-SFIQSAD-----DLLEIR-KIISQNKIGLMSKIEKPRAIEYASEIIQLSD--AVM 240 (480)
Q Consensus 170 ~ltekD~~di~~a~~~~~vD~ial-SfVr~~~-----di~~~r-~~l~~~~~~IiaKIE~~~al~nl~eI~~~sD--gim 240 (480)
.+|..|+..+--.+.+.++|+|=+ ||+++.. +..... .......+...+..-+..+++-.. ....+ .++
T Consensus 22 ~~~~~~k~~i~~~L~~aGv~~IEvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 99 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLVPNMKGYEAAA--AAHADEIAVF 99 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEECSSHHHHHHHH--HTTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHC--CCCCCEEEEE
T ss_conf 98999999999999981999899816647743688888999875147765641756313431023210--2588789998
Q ss_pred EECCCCCH----HCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCH---HHHHHHHHHH-HCCCCEEEECC
Q ss_conf 52222002----1587673689999999985139839980576788882889840---3477899998-51996899814
Q gi|254780442|r 241 VARGDLGV----EMALELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTR---AEVSDVATAV-FEEADAIMLSA 312 (480)
Q Consensus 241 iaRGDLg~----e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTR---aEv~Dvanav-~dG~D~imLs~ 312 (480)
+.-.|... ....++........+..++..+..+-...+.. ...+..++ .+..+.++.. ..|+|.|.|.
T Consensus 100 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~I~l~- 175 (295)
T 1ydn_A 100 ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCV---VECPYDGPVTPQAVASVTEQLFSLGCHEVSLG- 175 (295)
T ss_dssp EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECS---SEETTTEECCHHHHHHHHHHHHHHTCSEEEEE-
T ss_pred EECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEE---ECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC-
T ss_conf 74267999999715578777776666665530352477665555---22553310335566655554422696499713-
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCH
Q ss_conf 4435446589999999988763010124444443203878888789999999986104786899970883
Q gi|254780442|r 313 ETASGSYPVDAVRTMSLVASSAERDSSWLEMRSLRRIEPNETGADVISSAARQIAETLRLSAIFCYTASG 382 (480)
Q Consensus 313 ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv~T~sG 382 (480)
-|.-+..|.++-.....+....... .. ......+.- +|.+....|-..+++. |=-|-.|
T Consensus 176 Dt~G~~~P~~v~~~i~~~~~~~~~~-~l-------~~H~Hnn~G--lA~aN~l~A~~aGa~~-iD~ti~G 234 (295)
T 1ydn_A 176 DTIGRGTPDTVAAMLDAVLAIAPAH-SL-------AGHYHDTGG--RALDNIRVSLEKGLRV-FDASVGG 234 (295)
T ss_dssp ETTSCCCHHHHHHHHHHHHTTSCGG-GE-------EEEEBCTTS--CHHHHHHHHHHHTCCE-EEEBTTC
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCC-CE-------EEEECCCCH--HHHHHHHHHHHHCCCE-EEECCCC
T ss_conf 5355658788788998875057764-22-------577669803--8999999999809999-9962556
No 251
>1doa_B RHO GDI 1, protein (GDP-dissociation inhibitor 1); GTP-binding protein, CDC42, X-RAY, cell cycle; HET: GDP GER; 2.60A {Bos taurus} SCOP: b.1.18.8 PDB: 1hh4_D* 1cc0_E*
Probab=24.28 E-value=26 Score=13.02 Aligned_cols=26 Identities=27% Similarity=0.535 Sum_probs=11.5
Q ss_pred EECCCCEEEEEECCCCCEEECCCCEEEEE
Q ss_conf 98789867886548981896589999995
Q gi|254780442|r 68 IDLQGPKFRVGKFANSKVDLTEGQIFTLD 96 (480)
Q Consensus 68 ~Dl~GpkiR~g~~~~~~i~l~~G~~v~l~ 96 (480)
+||+|+ +..+++.++.|++|..+++.
T Consensus 103 ldl~~~---l~~lk~~~FtIKEGs~Y~ik 128 (219)
T 1doa_B 103 LDLTGD---LESFKKQSFVLKEGVEYRIK 128 (219)
T ss_dssp EECSSC---CGGGGGCCEEEETTCEEEEE
T ss_pred ECCCCC---CCCCCCCCEEECCCCEEEEE
T ss_conf 538874---10104786782589679999
No 252
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrolase, cellulose degradation; 1.60A {Clostridium cellulolyticum H10} SCOP: c.1.8.3
Probab=24.25 E-value=26 Score=13.01 Aligned_cols=52 Identities=12% Similarity=0.327 Sum_probs=31.1
Q ss_pred CHHHHHHHHHCCCCEEEEECCCCC---------HHHHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 999999999739978999888889---------899999999999999974992799998789
Q gi|254780442|r 19 SEDVINRLHEEGTDVFRINMSHTS---------HDKMCELIKKIRAVELRSRRPIGILIDLQG 72 (480)
Q Consensus 19 ~~e~i~~l~~aG~nv~RiN~SHg~---------~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~G 72 (480)
+++.|+.|.++|.|.+||=+++.. .+...+.++.+=..+.+.| +-+++|+-.
T Consensus 63 t~~~i~~ik~~Gfn~vRiPv~w~~~~~~~~~~id~~~l~~v~~vV~~a~~~G--l~vIldlH~ 123 (380)
T 1edg_A 63 TKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNK--MYVILNTHH 123 (380)
T ss_dssp CHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTT--CEEEEECCS
T ss_pred CHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEECCC
T ss_conf 4999999998699869965603540678888409899999999999999889--989996377
No 253
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas, ligand, substrate; 1.60A {Thermoanaerobacteriumthermosulfurigenes} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=24.23 E-value=26 Score=13.01 Aligned_cols=31 Identities=29% Similarity=0.380 Sum_probs=20.9
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 9988888989999999999999997499279999878
Q gi|254780442|r 35 RINMSHTSHDKMCELIKKIRAVELRSRRPIGILIDLQ 71 (480)
Q Consensus 35 RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 71 (480)
++|=..|+.++.+++++..++ +-+.|++|.-
T Consensus 108 ~vd~~~Gt~~dfk~LV~~aH~------~GI~VilD~V 138 (683)
T 3bmv_A 108 RTNPYFGSFTDFQNLINTAHA------HNIKVIIDFA 138 (683)
T ss_dssp EECTTTCCHHHHHHHHHHHHH------TTCEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHH------CCCEEEEEEC
T ss_conf 747145999999999999998------8998999989
No 254
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ...
Probab=24.21 E-value=19 Score=13.98 Aligned_cols=74 Identities=14% Similarity=0.164 Sum_probs=34.5
Q ss_pred CCEEECCCCEEEEECCCCCCCCC-CCCCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEECCCCCCC
Q ss_conf 81896589999995324556444-22126644222113365267406842210234454112455138808711456446
Q gi|254780442|r 83 SKVDLTEGQIFTLDNKDSLGSSD-RVMLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKVIAGISIADRKGISF 161 (480)
Q Consensus 83 ~~i~l~~G~~v~l~~~~~~~~~~-~i~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvni 161 (480)
..+.+++||.|....++..|..- .+.++ ....+++++.=.+ ...+ +.. -..++|.
T Consensus 39 R~~~IkkGD~V~Vi~Gk~KGk~GkV~~V~--------~k~~rV~Vegvn~----~k~~----------~k~--~~~pIh~ 94 (120)
T 1vq8_T 39 RNVRVNAGDTVEVLRGDFAGEEGEVINVD--------LDKAVIHVEDVTL----EKTD----------GEE--VPRPLDT 94 (120)
T ss_dssp SEEECCTTCEEEECSSTTTTCEEEEEEEE--------TTTTEEEETTCEE----ECSS----------SCE--EECCBCG
T ss_pred CCCCEECCCEEEEEECCCCCCCCEEEEEE--------CCCCEEEEECCEE----EECC----------CCE--EECCCCH
T ss_conf 53315079999995667699753299998--------6799999948289----9558----------977--8643464
Q ss_pred CCCCCCCCCCCHHHHHHHH
Q ss_conf 7854455567655677899
Q gi|254780442|r 162 PDTFLTTQALTQKDREDLH 180 (480)
Q Consensus 162 p~~~i~l~~ltekD~~di~ 180 (480)
.+..+--|.+.+.+...+.
T Consensus 95 SNV~i~~~~~~~~~R~~~l 113 (120)
T 1vq8_T 95 SNVRVTDLDLEDEKREARL 113 (120)
T ss_dssp GGEEEEECCCCCHHHHHHH
T ss_pred HHEEEEECCCCCCHHHHHH
T ss_conf 8889984767870476676
No 255
>2v3j_A Essential for mitotic growth 1; EMG1, rRNA processing, nuclear protein, ribonucleoprotein, ribosome biogenesis; 2.00A {Saccharomyces cerevisiae} SCOP: c.116.1.6 PDB: 2v3k_A*
Probab=23.78 E-value=22 Score=13.54 Aligned_cols=25 Identities=24% Similarity=0.325 Sum_probs=23.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 4443544658999999998876301
Q gi|254780442|r 312 AETASGSYPVDAVRTMSLVASSAER 336 (480)
Q Consensus 312 ~ETa~G~yP~~~v~~~~~i~~~~E~ 336 (480)
.|-++|+||..+..+.++||...|.
T Consensus 223 e~ISISdYpLSa~~v~sri~~~~E~ 247 (258)
T 2v3j_A 223 EKVGLSNYPLSASVACSKFCHGAED 247 (258)
T ss_dssp CEEBSCSSCCCHHHHHHHHHHHHHH
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 5899728854199999999999999
No 256
>1du6_A PBX1, homeobox protein PBX1; homeodomain, gene regulation; NMR {Mus musculus} SCOP: a.4.1.1
Probab=23.44 E-value=27 Score=12.90 Aligned_cols=26 Identities=23% Similarity=0.562 Sum_probs=18.7
Q ss_pred EHHHHHHHH----HCCCCCHHHHHHHHHHH
Q ss_conf 057678888----28898403477899998
Q gi|254780442|r 276 ATQMLESMV----TSPFPTRAEVSDVATAV 301 (480)
Q Consensus 276 ATq~leSM~----~~p~PTRaEv~Dvanav 301 (480)
+.++|+..- .||.||.+|-..+|...
T Consensus 14 ~~~iL~~wf~~~~~nPyP~~~~k~~La~~~ 43 (64)
T 1du6_A 14 ATEILNEYFYSHLSNPYPSEEAKEELAKKC 43 (64)
T ss_dssp HHHHHHHHHHHTTTSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 999999999981679996999999999998
No 257
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=23.40 E-value=27 Score=12.90 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=24.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 7899988888989999999999999997499279999878
Q gi|254780442|r 32 DVFRINMSHTSHDKMCELIKKIRAVELRSRRPIGILIDLQ 71 (480)
Q Consensus 32 nv~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~Dl~ 71 (480)
|-+.++-+.|+.++.+++++..++ +-+.|++|+-
T Consensus 58 d~~~id~~~Gt~~e~~~lv~~~H~------~Gi~VilD~V 91 (441)
T 1lwj_A 58 DFYSFKAEYGSEREFKEMIEAFHD------SGIKVVLDLP 91 (441)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHH------TTCEEEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH------CCCEEEEECC
T ss_conf 678757134999999999999998------7998999505
No 258
>3f6c_A Positive transcription regulator EVGA; structural genomics, , PSI-2, protein structure initiative; 1.45A {Escherichia coli k-12}
Probab=23.38 E-value=27 Score=12.90 Aligned_cols=51 Identities=12% Similarity=0.076 Sum_probs=23.9
Q ss_pred CH-HHHHHHHHHCCCCCEEEEECCHHH-HHHHHHHCCCEEEEECCCCCHHHHHH
Q ss_conf 83-799999841888869999299899-98766653937999368799999999
Q gi|254780442|r 381 SG-ATGLRAARERPKLEIIALSPMIQT-ARRLALVWGIHCVVTEDASDSDDMVN 432 (480)
Q Consensus 381 sG-~tA~~iS~~RP~~pIiaiT~~~~t-~r~l~L~~GV~p~~~~~~~~~~~~i~ 432 (480)
+| ...+.+-+..|..||+.+|.+... ...-.+-.|+..++.+... .++..+
T Consensus 60 ~G~e~~~~lr~~~~~~~iivlS~~~~~~~~~~a~~~Ga~~yl~Kp~~-~~~L~~ 112 (134)
T 3f6c_A 60 NGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEG-MNNIIA 112 (134)
T ss_dssp CHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEEGGGC-THHHHH
T ss_pred CHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCC-HHHHHH
T ss_conf 89999999995299983899967899999999998799899979899-999999
No 259
>3if2_A Aminotransferase; YP_265399.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=23.37 E-value=27 Score=12.90 Aligned_cols=30 Identities=10% Similarity=0.134 Sum_probs=16.4
Q ss_pred HHHHHCCCCCCCCEEEEEEEECCCC-------CCCCCEEEEEEE
Q ss_conf 9999888877887799985222788-------886415999994
Q gi|254780442|r 436 RIVVEQGFGKPGDRIIISAGLPLGT-------PGSTNMLRIAYI 472 (480)
Q Consensus 436 ~~l~~~g~i~~GD~VVvv~G~p~~~-------~G~TN~irv~~V 472 (480)
+.+.++| |.++.|..++. ....+.+|+-..
T Consensus 384 ~~l~~~g-------V~v~pg~~F~~~~~~~~~~~~~~~vRis~~ 420 (444)
T 3if2_A 384 ERLKAKG-------TLIVPSEYFFPGVDVSDYQHAHECIRMSIA 420 (444)
T ss_dssp HHHHHTT-------EECEEGGGSCTTCCCTTCSGGGSEEEEESS
T ss_pred HHHHHCC-------EEEEECHHCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 9999789-------299844220677544455677997999967
No 260
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=23.32 E-value=27 Score=12.89 Aligned_cols=66 Identities=12% Similarity=0.110 Sum_probs=42.9
Q ss_pred HHHHCCCCCEEEEEC----CCHH-HHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHH
Q ss_conf 986104786899970----8837-9999984188886999929989998766653937999368799999999
Q gi|254780442|r 365 QIAETLRLSAIFCYT----ASGA-TGLRAARERPKLEIIALSPMIQTARRLALVWGIHCVVTEDASDSDDMVN 432 (480)
Q Consensus 365 ~lA~~l~a~aIiv~T----~sG~-tA~~iS~~RP~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~~~~~~~i~ 432 (480)
+....-..++|++-- .+|. .++.+-+.+|..||+.+|.......+ ..-+|+..++.++++. ++..+
T Consensus 39 ~~~~~~~~dlvilD~~mP~~~G~e~~~~ir~~~~~~pii~lt~~~~~~~~-~~~~Ga~~~l~KP~~~-~~L~~ 109 (116)
T 3a10_A 39 KKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYSHYRSD-MSSWAADEYVVKSFNF-DELKE 109 (116)
T ss_dssp HHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCGGGGGC-GGGGGSSEEEECCSST-HHHHH
T ss_pred HHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHH-HHHCCCCEEEECCCCH-HHHHH
T ss_conf 99984799989983688999999999999843998979999897899999-9826998899898999-99999
No 261
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=23.29 E-value=27 Score=12.88 Aligned_cols=47 Identities=15% Similarity=0.083 Sum_probs=36.6
Q ss_pred HHHHHHHHHHCCCCCEEEEECCC---------HHHHHHHHHHCCCCCEEEEECCHHH
Q ss_conf 99999998610478689997088---------3799999841888869999299899
Q gi|254780442|r 359 ISSAARQIAETLRLSAIFCYTAS---------GATGLRAARERPKLEIIALSPMIQT 406 (480)
Q Consensus 359 Ia~aav~lA~~l~a~aIiv~T~s---------G~tA~~iS~~RP~~pIiaiT~~~~t 406 (480)
.+.+..+.+.+.+++.||.-+++ |.++..+-+ +.+||++.+-|+..+
T Consensus 225 ~~~~I~~~a~~~~adLlVmGa~~~~~~~~~llGs~t~~il~-~~~~pVLvv~p~~~~ 280 (290)
T 3mt0_A 225 ADVLIPRTAQKLDAVVTVIGTVARTGLSGALIGNTAEVVLD-TLESDVLVLKPDDII 280 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCSSCCGGGCCSCHHHHHHHT-TCSSEEEEECCHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHH-HCCCCEEEECCCCCC
T ss_conf 88999999986799999984799866563505709999985-189999998989988
No 262
>3c2q_A Uncharacterized conserved protein; putative LOR/SDH, structural genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis S2}
Probab=23.15 E-value=27 Score=12.87 Aligned_cols=18 Identities=17% Similarity=0.246 Sum_probs=9.8
Q ss_pred HHHHHHHCCCEEEEEHHH
Q ss_conf 999985139839980576
Q gi|254780442|r 262 LIRIARQLGKPVVIATQM 279 (480)
Q Consensus 262 ii~~~~~~~kpvivATq~ 279 (480)
|++.|-+.+.|...|.-+
T Consensus 230 imy~cVk~~VPfVLAGSI 247 (345)
T 3c2q_A 230 IMYQCIKNNIPYVLAGSI 247 (345)
T ss_dssp HHHHHHHTTCCEEEECCT
T ss_pred HHHHHHHCCCCEEEEEEC
T ss_conf 699998679988987103
No 263
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porphyria, structural genomics, riken structural genomics/proteomics initiative; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=23.11 E-value=27 Score=12.86 Aligned_cols=68 Identities=10% Similarity=0.159 Sum_probs=47.0
Q ss_pred CCCCCEEEEECCCHHHHHHHHH-----------HCCCCCEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 0478689997088379999984-----------18888699992998999876665393799936879999999999999
Q gi|254780442|r 369 TLRLSAIFCYTASGATGLRAAR-----------ERPKLEIIALSPMIQTARRLALVWGIHCVVTEDASDSDDMVNRACRI 437 (480)
Q Consensus 369 ~l~a~aIiv~T~sG~tA~~iS~-----------~RP~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~ 437 (480)
.-..+ +|+|| |+.+++.+.. +..+++++++ -+.|++.+. -+|+.+...+...+.+.+++...++
T Consensus 181 ~~~~D-~V~ft-S~s~v~~f~~~~~~~~~l~~~l~~~~~v~aI--Gp~Ta~al~-~~G~~~~~~~~~~~~~~lv~al~~~ 255 (261)
T 1wcw_A 181 RGEVD-ALAFV-AAIQVEFLFEGAKDPKALREALNTRVKALAV--GRVTADALR-EWGVKPFYVDETERLGSLLQGFKRA 255 (261)
T ss_dssp HTCCS-EEEEC-SHHHHHHHHHHCSCHHHHHHHHHHTSEEEEE--SHHHHHHHH-HTTCCCSEEECSCCHHHHHHHHHHH
T ss_pred CCCCE-EEEEC-CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE--CHHHHHHHH-HCCCCCEEECCCCCHHHHHHHHHHH
T ss_conf 47811-99957-9999999999865420457874279789998--999999999-8699857975999989999999999
Q ss_pred HHHC
Q ss_conf 9988
Q gi|254780442|r 438 VVEQ 441 (480)
Q Consensus 438 l~~~ 441 (480)
++++
T Consensus 256 l~~~ 259 (261)
T 1wcw_A 256 LQKE 259 (261)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 8764
No 264
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.48A {Mesorhizobium loti MAFF303099}
Probab=22.95 E-value=27 Score=12.84 Aligned_cols=13 Identities=8% Similarity=0.008 Sum_probs=5.1
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 6631178887533
Q gi|254780442|r 224 RAIEYASEIIQLS 236 (480)
Q Consensus 224 ~al~nl~eI~~~s 236 (480)
+.++.+..+-++.
T Consensus 175 ~di~~v~~ir~~~ 187 (389)
T 2oz8_A 175 RDLRRLELLKTCV 187 (389)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHH
T ss_conf 8999999999874
No 265
>3di4_A Uncharacterized protein DUF1989; YP_165628.1, protein of unknown function (DUF1989), structural genomics; 1.60A {Silicibacter pomeroyi dss-3}
Probab=22.86 E-value=27 Score=12.83 Aligned_cols=55 Identities=15% Similarity=0.218 Sum_probs=30.9
Q ss_pred CEEECCCCEEEEECCCCCCCCCCCCCCCCCC-------------HHHCCCCCEEEEECCCE--EECCCCC
Q ss_conf 1896589999995324556444221266442-------------22113365267406842--2102344
Q gi|254780442|r 84 KVDLTEGQIFTLDNKDSLGSSDRVMLPHPEI-------------FASIKIGDRLLIDDGRV--KLCVQEK 138 (480)
Q Consensus 84 ~i~l~~G~~v~l~~~~~~~~~~~i~i~y~~l-------------~~~ik~Gd~I~idDG~i--~l~V~~~ 138 (480)
.+++++||.++++.-+..-.......|-.++ -..+++|+.++-+.|.+ .++|++-
T Consensus 60 a~~Vk~Gq~lRI~d~~G~QvvD~~~~na~d~~Er~~~~~Tra~~~~~l~~G~~L~S~~~~~rPl~tIv~D 129 (286)
T 3di4_A 60 CFEVKAGQFFRISSVEGPQVGDLNLHNLHDLTERFFSGKTRALHGTHVTTGERLWSNLPYLRPMATIIED 129 (286)
T ss_dssp EEEECTTCEEEEEECSSCCCEEEEEEETTEEEEEBCHHHHHHHHCSBCCTTCEEEBCTTTCCEEEEEEEE
T ss_pred EEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHCCHHHCCCCCCCCCEEEECCCCCCEEEEEEEC
T ss_conf 8998999889999789993575577415553135442010533551037888778678777366899832
No 266
>2c95_A Adenylate kinase 1; AP4A, nucleotide kinase, transferase, ATP-binding; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=22.84 E-value=17 Score=14.37 Aligned_cols=38 Identities=16% Similarity=0.223 Sum_probs=27.9
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHH
Q ss_conf 7775269994187757999999999739978999888889899
Q gi|254780442|r 3 NLRRIKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTSHDK 45 (480)
Q Consensus 3 ~mrktKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~ 45 (480)
.|+|.+||.-+||.-+-+.++.+++.. +++|.|-+..+
T Consensus 5 ~~kk~~iI~i~G~pGSGKsT~a~~La~-----~~g~~~is~g~ 42 (196)
T 2c95_A 5 KLKKTNIIFVVGGPGSGKGTQCEKIVQ-----KYGYTHLSTGD 42 (196)
T ss_dssp HHTTSCEEEEEECTTSSHHHHHHHHHH-----HHCCEEEEHHH
T ss_pred HCCCCCEEEEECCCCCCHHHHHHHHHH-----HHCCCEECCCH
T ss_conf 357786899989999987999999999-----87995472218
No 267
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar binding protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=22.60 E-value=28 Score=12.79 Aligned_cols=51 Identities=29% Similarity=0.382 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEECCCHHH--HHH-----HH---HHCCCCCEEEEECCHHH
Q ss_conf 789999999986104-78689997088379--999-----98---41888869999299899
Q gi|254780442|r 356 ADVISSAARQIAETL-RLSAIFCYTASGAT--GLR-----AA---RERPKLEIIALSPMIQT 406 (480)
Q Consensus 356 ~~aIa~aav~lA~~l-~a~aIiv~T~sG~t--A~~-----iS---~~RP~~pIiaiT~~~~t 406 (480)
.+.|..+|-.+++.+ +-..|+++-.-|.. |.. .. +.||..|.++++.+..+
T Consensus 24 ~~~i~~aa~~i~~~~~~~~kI~~~GnGgSa~~A~h~a~~l~~~~~~~r~~l~ai~l~~~~~~ 85 (196)
T 2yva_A 24 PDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVV 85 (196)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHTCSSSCCCCCCEEESSCCHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHH
T ss_conf 99999999999999987998999988672889999999986610025667048972677032
No 268
>2iut_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA ATG; 2.25A {Pseudomonas aeruginosa} PDB: 2iuu_A*
Probab=22.31 E-value=28 Score=12.75 Aligned_cols=60 Identities=20% Similarity=0.400 Sum_probs=38.6
Q ss_pred CCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEHHH-----HHHHHHCCCCCHHH--HHHHHH--HHHCC
Q ss_conf 220021587673689999999985139839980576-----78888288984034--778999--98519
Q gi|254780442|r 244 GDLGVEMALELIPGIQKKLIRIARQLGKPVVIATQM-----LESMVTSPFPTRAE--VSDVAT--AVFEE 304 (480)
Q Consensus 244 GDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivATq~-----leSM~~~p~PTRaE--v~Dvan--av~dG 304 (480)
.||-+..+-+ +-..=.+|-++++.+|--.|+|||= +.+++....|+|-= |++-.+ .|+|.
T Consensus 353 AdLm~~~~~e-ve~~i~rlAq~gRA~GIHLIlATQRPs~dvItg~IKaN~p~RIaf~v~s~~dSr~ILd~ 421 (574)
T 2iut_A 353 ADMMMIVGKK-VEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQ 421 (574)
T ss_dssp TTHHHHTCHH-HHHHHHHHHHHCTTTTEEEEEEESCCCTTTSCHHHHHTCCEEEEECCSCHHHHHHHHSS
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCEEEEEECCHHHHCCCCCC
T ss_conf 9998764688-99999999999997498899840677656104669862775389986874330311377
No 269
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalanine catabolism; HET: PLP; 2.30A {Homo sapiens}
Probab=22.28 E-value=28 Score=12.75 Aligned_cols=19 Identities=11% Similarity=0.158 Sum_probs=9.7
Q ss_pred EEEEEEECCCCCCCCCEEEEEE
Q ss_conf 9998522278888641599999
Q gi|254780442|r 450 IIISAGLPLGTPGSTNMLRIAY 471 (480)
Q Consensus 450 VVvv~G~p~~~~G~TN~irv~~ 471 (480)
|.++-|..++. .+.+|+-.
T Consensus 385 V~v~PG~~F~~---~~~iRis~ 403 (427)
T 3dyd_A 385 VHCLPATCFEY---PNFIRVVI 403 (427)
T ss_dssp EECEEGGGGTC---TTEEEEES
T ss_pred EEEEECCCCCC---CCEEEEEE
T ss_conf 99992643589---89799998
No 270
>1zgz_A Torcad operon transcriptional regulatory protein TORR; two-component system, gene regulation, transcription factor, TMAO respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=22.28 E-value=28 Score=12.75 Aligned_cols=74 Identities=23% Similarity=0.260 Sum_probs=46.6
Q ss_pred HHHHCCCCCEEEEECC----CHHHHHHHHHHCCCCCEEEEECCH-HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 9861047868999708----837999998418888699992998-99987666539379993687999999999999999
Q gi|254780442|r 365 QIAETLRLSAIFCYTA----SGATGLRAARERPKLEIIALSPMI-QTARRLALVWGIHCVVTEDASDSDDMVNRACRIVV 439 (480)
Q Consensus 365 ~lA~~l~a~aIiv~T~----sG~tA~~iS~~RP~~pIiaiT~~~-~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~ 439 (480)
+...+-..+.|++--. +|.....--|..+..||+.+|... ...+.-.+-.|+..++.+++ +.++........++
T Consensus 40 ~~l~~~~~dliilD~~mP~~dG~e~~~~~r~~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~-~~~~L~~~i~~~l~ 118 (122)
T 1zgz_A 40 EIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPL-ELRELVVRVKNLLW 118 (122)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHHTCSEEEESSC-CHHHHHHHHHHHHH
T ss_pred HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHHHHH
T ss_conf 99973999899997898997728999999847999399998369999999999869989997989-99999999999998
No 271
>3kta_B Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xew_Y 1xex_B*
Probab=22.12 E-value=28 Score=12.72 Aligned_cols=36 Identities=6% Similarity=-0.017 Sum_probs=28.0
Q ss_pred HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCEE
Q ss_conf 799999841888869999299899987666539379
Q gi|254780442|r 383 ATGLRAARERPKLEIIALSPMIQTARRLALVWGIHC 418 (480)
Q Consensus 383 ~tA~~iS~~RP~~pIiaiT~~~~t~r~l~L~~GV~p 418 (480)
+.+.++..+.-...+|.+|+++.++..-.-+|||+.
T Consensus 106 ~~~~~l~~~s~~~Q~i~iTh~~~~~~~ad~~~~Vt~ 141 (173)
T 3kta_B 106 RVADLIKESSKESQFIVITLRDVMMANADKIIGVSM 141 (173)
T ss_dssp HHHHHHHHHTTTSEEEEECSCHHHHTTCSEEEEEEE
T ss_pred HHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEEE
T ss_conf 999999985789889999888999983860999999
No 272
>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.20A {Thermus thermophilus} SCOP: c.94.1.1
Probab=21.99 E-value=28 Score=12.71 Aligned_cols=24 Identities=21% Similarity=0.160 Sum_probs=14.9
Q ss_pred HHHHHHHCCC-CCEEEEECCCHHHH
Q ss_conf 9999861047-86899970883799
Q gi|254780442|r 362 AARQIAETLR-LSAIFCYTASGATG 385 (480)
Q Consensus 362 aav~lA~~l~-a~aIiv~T~sG~tA 385 (480)
+++++|-.++ |++||=.|+||+|-
T Consensus 137 GsvE~ap~~g~AD~IvDiv~TG~TL 161 (206)
T 1ve4_A 137 GNIELAAVTGLADAVVDVVQTGATL 161 (206)
T ss_dssp SCTHHHHHTTSSSEEEEEESSSHHH
T ss_pred CCCCCCCCCCCCEEEEEEECCHHHH
T ss_conf 8603546788510899984689999
No 273
>2j01_Y 50S ribosomal protein L24; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} SCOP: b.34.5.1 PDB: 1vsp_S 2hgj_X 2hgq_X 2hgu_X 1vsa_S 2j03_Y 2jl6_Y 2jl8_Y 2v47_Y 2v49_Y 2wdi_Y 2wdj_Y 2wdl_Y 2wdn_Y 2wh2_Y 2wh4_Y 2wrj_Y 2wrl_Y 2wro_Y 2wrr_Y ...
Probab=21.98 E-value=21 Score=13.66 Aligned_cols=74 Identities=9% Similarity=0.044 Sum_probs=32.2
Q ss_pred CEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEECCCCCCCCC
Q ss_conf 18965899999953245564442212664422211336526740684221023445411245513880871145644678
Q gi|254780442|r 84 KVDLTEGQIFTLDNKDSLGSSDRVMLPHPEIFASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKVIAGISIADRKGISFPD 163 (480)
Q Consensus 84 ~i~l~~G~~v~l~~~~~~~~~~~i~i~y~~l~~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvnip~ 163 (480)
++.+++||.|..-.....|..-.| .+.+...++++++.=.+.-+-...+ -.-.+||.+....++|+.+
T Consensus 4 K~kikkGD~V~VisGkdKGK~G~V-------l~V~~~~~~ViVeGvN~~kkh~K~~-----~~~~~Ggii~~E~PIh~SN 71 (110)
T 2j01_Y 4 KMHVKKGDTVLVASGKYKGRVGKV-------KEVLPKKYAVIVEGVNIVKKAVRVS-----PKYPQGGFIEKEAPLHASK 71 (110)
T ss_dssp CCCSCCSSCEECCSSTTSSCCBSC-------CCCCCTTCBCCTTSCCCCCCCCCSC-----CCSSCCCSSCCCCCCBGGG
T ss_pred CCEEECCCEEEEEECCCCCCEEEE-------EEEECCCCEEEEECCEEEEECCCCC-----CCCCCCCEEEEECCEEHHH
T ss_conf 348757999999168889971789-------9998989999997837565302677-----7788986899983672676
Q ss_pred CCCCCC
Q ss_conf 544555
Q gi|254780442|r 164 TFLTTQ 169 (480)
Q Consensus 164 ~~i~l~ 169 (480)
..+--|
T Consensus 72 V~lvd~ 77 (110)
T 2j01_Y 72 VRPICP 77 (110)
T ss_dssp CEECSS
T ss_pred EEEEEC
T ss_conf 789828
No 274
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp}
Probab=21.95 E-value=28 Score=12.70 Aligned_cols=135 Identities=11% Similarity=0.152 Sum_probs=71.4
Q ss_pred HHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCH---
Q ss_conf 8998873488532505855773479999986200343--35553278566311788875331247522220021587---
Q gi|254780442|r 178 DLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKI--GLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMAL--- 252 (480)
Q Consensus 178 di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~--~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~--- 252 (480)
.++..++. ++|.|.. .+.+..++.++-+.+.+.++ ++--.-+| .++.+...+...|.|++ ++++-|.
T Consensus 101 ~i~~~~~~-g~d~I~~-H~E~~~~~~~~i~~ik~~g~k~Glalnp~T--~i~~l~~~l~~iD~Vlv----M~V~PGf~GQ 172 (246)
T 3inp_A 101 LIESFAKA-GATSIVF-HPEASEHIDRSLQLIKSFGIQAGLALNPAT--GIDCLKYVESNIDRVLI----MSVNPGFGGQ 172 (246)
T ss_dssp HHHHHHHH-TCSEEEE-CGGGCSCHHHHHHHHHTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEE----ECSCTTC--C
T ss_pred HHHHHHHC-CCCEEEE-ECCCCCCHHHHHHHHHHCCCEEEEEECCCC--CHHHHHHHHHHHCEEEE----EECCCCCCCC
T ss_conf 99999867-9979998-420210899999999981981799963777--89999887640003567----4216988761
Q ss_pred HHHHHHH---HHHHHHHHHCCCEE--EEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH
Q ss_conf 6736899---99999985139839--980576788882889840347789999851996899814443544658999999
Q gi|254780442|r 253 ELIPGIQ---KKLIRIARQLGKPV--VIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVRTM 327 (480)
Q Consensus 253 e~vp~~Q---k~ii~~~~~~~kpv--ivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~~~ 327 (480)
...|..- +++-+...+.+..+ -|-.-+=+ ..+.....-|+|.+.+..=--....|.++++.+
T Consensus 173 ~f~~~~l~kI~~l~~~~~~~~~~~~I~VDGGIn~-------------~ti~~l~~aGad~~V~GSaiF~~~d~~~~i~~l 239 (246)
T 3inp_A 173 KFIPAMLDKAKEISKWISSTDRDILLEIDGGVNP-------------YNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKM 239 (246)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCT-------------TTHHHHHTTTCCEEEESHHHHTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH-------------HHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHH
T ss_conf 1457799999999988752477715999798799-------------999999987999999786886899999999999
Q ss_pred HHHHHH
Q ss_conf 998876
Q gi|254780442|r 328 SLVASS 333 (480)
Q Consensus 328 ~~i~~~ 333 (480)
++...+
T Consensus 240 r~~l~k 245 (246)
T 3inp_A 240 RDELNK 245 (246)
T ss_dssp HHHHHT
T ss_pred HHHHHC
T ss_conf 999864
No 275
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=21.77 E-value=29 Score=12.68 Aligned_cols=17 Identities=18% Similarity=0.153 Sum_probs=8.4
Q ss_pred HHHHHHHHCCCCEEEEC
Q ss_conf 78999985199689981
Q gi|254780442|r 295 SDVATAVFEEADAIMLS 311 (480)
Q Consensus 295 ~Dvanav~dG~D~imLs 311 (480)
..+..|+.-|++++++-
T Consensus 91 ~~~~~a~~~Ga~gyl~K 107 (154)
T 2qsj_A 91 ELIRAALEAGADGFIPK 107 (154)
T ss_dssp HHHHHHHHTTCCBBCCT
T ss_pred HHHHHHHHCCCCEEEEC
T ss_conf 99999998599889979
No 276
>2wwb_L 60S ribosomal protein L26-A; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Triticum aestivum} PDB: 2wwa_L 2ww9_L 1s1i_U
Probab=21.66 E-value=25 Score=13.16 Aligned_cols=19 Identities=5% Similarity=0.073 Sum_probs=13.6
Q ss_pred CEEECCCCEEEEECCCCCC
Q ss_conf 1896589999995324556
Q gi|254780442|r 84 KVDLTEGQIFTLDNKDSLG 102 (480)
Q Consensus 84 ~i~l~~G~~v~l~~~~~~~ 102 (480)
.+.+++||+|.+..++..|
T Consensus 47 s~~IrkGD~V~Vi~G~~KG 65 (127)
T 2wwb_L 47 ALPIRRDDEVLVVRGSKKG 65 (127)
T ss_dssp EEECCTTSEEEECSSSSTT
T ss_pred CCEEECCCEEEEEECCCCC
T ss_conf 1106079999997743489
No 277
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata}
Probab=21.65 E-value=29 Score=12.66 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=31.6
Q ss_pred HHHHHHHHHHCCCCCEEEEECC---------CHHHHHHHHHHCCCCCEEEE
Q ss_conf 9999999861047868999708---------83799999841888869999
Q gi|254780442|r 359 ISSAARQIAETLRLSAIFCYTA---------SGATGLRAARERPKLEIIAL 400 (480)
Q Consensus 359 Ia~aav~lA~~l~a~aIiv~T~---------sG~tA~~iS~~RP~~pIiai 400 (480)
++.+.++.|++.+++.||+-++ -|.++..+.+. -+||++.+
T Consensus 98 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~GS~~~~l~~~-~~~PVlvV 147 (147)
T 3hgm_A 98 PSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGS-AHCPVLVV 147 (147)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHH-CSSCEEEC
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHC-CCCCEEEC
T ss_conf 899887752035888899717999865456227599999972-89999959
No 278
>3hba_A Putative phosphosugar isomerase; YP_563707.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=21.65 E-value=29 Score=12.66 Aligned_cols=45 Identities=16% Similarity=0.223 Sum_probs=16.5
Q ss_pred ECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEE
Q ss_conf 50585577347999998620034335553278566311788875331247
Q gi|254780442|r 191 VALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVM 240 (480)
Q Consensus 191 ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgim 240 (480)
|++|---+..++.++-+..++.+..+++=..++++ .+.+.+|..+
T Consensus 95 I~iSqSG~T~eti~al~~ak~~g~~~i~iT~~~~S-----~La~~~d~~i 139 (334)
T 3hba_A 95 IVISQSGRSPDILAQARMAKNAGAFCVALVNDETA-----PIKDIVDVVI 139 (334)
T ss_dssp EEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTS-----GGGGTSSEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCC-----HHHHHHCCCC
T ss_conf 99806999779999999998779838987279998-----7777641364
No 279
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=21.56 E-value=29 Score=12.65 Aligned_cols=69 Identities=16% Similarity=0.119 Sum_probs=42.3
Q ss_pred HHHHHCCCCCEEEEECC----CH-HHHHHHHHHCCCCCEEEEECC-HHHHHHHHHHCCCEEEEECCCCCHHHHHHH
Q ss_conf 99861047868999708----83-799999841888869999299-899987666539379993687999999999
Q gi|254780442|r 364 RQIAETLRLSAIFCYTA----SG-ATGLRAARERPKLEIIALSPM-IQTARRLALVWGIHCVVTEDASDSDDMVNR 433 (480)
Q Consensus 364 v~lA~~l~a~aIiv~T~----sG-~tA~~iS~~RP~~pIiaiT~~-~~t~r~l~L~~GV~p~~~~~~~~~~~~i~~ 433 (480)
.++..+...+.|++--. +| ...+.+-+..|..||+.+|-. ......-.+--|+.-++.+++ +.++..+.
T Consensus 40 l~~~~~~~~dlii~D~~mP~~~G~e~~~~ir~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~~yl~KP~-~~~~L~~~ 114 (120)
T 1tmy_A 40 VEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPF-QPSRVVEA 114 (120)
T ss_dssp HHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSC-CHHHHHHH
T ss_pred HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCC-CHHHHHHH
T ss_conf 9999836999999963689997999999999758799789997428999999999869989997989-99999999
No 280
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=21.50 E-value=12 Score=15.40 Aligned_cols=121 Identities=12% Similarity=0.042 Sum_probs=69.5
Q ss_pred HHCCCCCEEEEECCCEEECCCCCCCCEEEEEE--CC-----------CCEEECCCCCCCCCCC-CCCCCCCHHHHHHHHH
Q ss_conf 21133652674068422102344541124551--38-----------8087114564467854-4555676556778998
Q gi|254780442|r 116 ASIKIGDRLLIDDGRVKLCVQEKGIGFIKCKV--IA-----------GISIADRKGISFPDTF-LTTQALTQKDREDLHA 181 (480)
Q Consensus 116 ~~ik~Gd~I~idDG~i~l~V~~~~~~~i~c~V--~~-----------gG~l~s~Kgvnip~~~-i~l~~ltekD~~di~~ 181 (480)
-..++||.+++=-|.... +...++.-+.+.- .. +|.=+=-.-+-.|... -.+|.+|+.|++.+.-
T Consensus 104 v~a~PGdvi~vP~G~~H~-F~N~gdet~~llfv~~~~~~~pd~~~~d~g~~~~f~~vg~p~~~~~~~P~~t~~~~~~~~~ 182 (239)
T 2xlg_A 104 IQSEPKQLIYSPNHYMHG-FVNPTDKTLPIVFVWMRNEVAPDFPYHDGGMREYFQAVGPRITDLNNLPELTNAQRAAFAS 182 (239)
T ss_dssp EECCTTEEEEECTTEEEE-EECCSSSCEEEEEEEEECSSCTTCSCTTCSHHHHHHHHSCBCSCTTSCCCCC-----CTTT
T ss_pred EECCCCCEEEECCCCCEE-EECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 863998689958996055-6818997377999982477687755475027788886187433457899888789999874
Q ss_pred HHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHC
Q ss_conf 873488532505855773479999986200343355532785663117888753312475222200215
Q gi|254780442|r 182 ALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEM 250 (480)
Q Consensus 182 a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~ 250 (480)
.+-+.+++--..+|=|- .- ++.+-..=++|-++-.++..+-+++++- .|||-.+.+
T Consensus 183 ~ap~ygin~~~~~~e~~----~~----~~~kl~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 238 (239)
T 2xlg_A 183 EAPKYGINQSSYFMEYV----NT----ISDKLPAQIAKLKNDKDLERMVEVIEAF-----NRGDKSVTC 238 (239)
T ss_dssp TGGGGTEEECSSTTSSE----EE----EESSCCHHHHTCCCHHHHHHHHHHHHHH-----HHTCTTSEE
T ss_pred HCCCCCCCCCCEEEEEE----CC----CCCCCCHHHHHHHCCCCHHHHHHHHHHH-----HCCCCCEEC
T ss_conf 36401513573455563----05----3555867898641667479999999987-----157860656
No 281
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=21.34 E-value=29 Score=12.61 Aligned_cols=112 Identities=14% Similarity=0.125 Sum_probs=57.2
Q ss_pred CCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEE-CCCCC---HHCCHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 734799999862003433555327856631178887533124752-22200---21587673689999999985139839
Q gi|254780442|r 198 SADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVA-RGDLG---VEMALELIPGIQKKLIRIARQLGKPV 273 (480)
Q Consensus 198 ~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimia-RGDLg---~e~~~e~vp~~Qk~ii~~~~~~~kpv 273 (480)
+-+||..+|+..+ ..-++--|.+.+...-.- -...|||++. .|.-. ..-+++-+|.+++.+-.++-.-.-||
T Consensus 331 tw~dI~~l~~~~~--~pii~KGv~~~edA~~a~--~~Gv~~i~vsnhGGRqlD~~~~ti~~L~ei~~~l~~~~v~~~i~V 406 (511)
T 1kbi_A 331 TWKDIEELKKKTK--LPIVIKGVQRTEDVIKAA--EIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEV 406 (511)
T ss_dssp CHHHHHHHHHHCS--SCEEEEEECSHHHHHHHH--HTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEE
T ss_pred CHHHHHHHHHHCC--CCHHHHHCCCHHHHHHHH--HCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 8999999986157--510254212598899998--169971897166542145666548779999999887630798259
Q ss_pred EEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCC--CCHHHHHH
Q ss_conf 98057678888288984034778999985199689981444354--46589999
Q gi|254780442|r 274 VIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASG--SYPVDAVR 325 (480)
Q Consensus 274 ivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G--~yP~~~v~ 325 (480)
|+..-+=.- +||+-|+-=|||+++++.---.| .|..+.|+
T Consensus 407 iadGGIR~G------------~DV~KALALGAdaVgiGRp~L~ala~~G~eGV~ 448 (511)
T 1kbi_A 407 FVDGGVRRG------------TDVLKALCLGAKGVGLGRPFLYANSCYGRNGVE 448 (511)
T ss_dssp EEESSCCSH------------HHHHHHHHHTCSEEEECHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCH------------HHHHHHHHCCCCEEEECHHHHHHHHHCCHHHHH
T ss_conf 986898878------------999999984999776769999999854599999
No 282
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=21.32 E-value=29 Score=12.61 Aligned_cols=37 Identities=11% Similarity=0.151 Sum_probs=29.0
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHH
Q ss_conf 775269994187757999999999739978999888889899
Q gi|254780442|r 4 LRRIKIISTLGPSSFSEDVINRLHEEGTDVFRINMSHTSHDK 45 (480)
Q Consensus 4 mrktKIi~TlGPas~~~e~i~~l~~aG~nv~RiN~SHg~~e~ 45 (480)
|++.|.|.-+||.-+-+.++.+++.. ++++.|-+..+
T Consensus 1 m~~~k~Ivl~G~PGSGK~T~a~~Lae-----~~g~~~is~gd 37 (186)
T 3cm0_A 1 MDVGQAVIFLGPPGAGKGTQASRLAQ-----ELGFKKLSTGD 37 (186)
T ss_dssp --CEEEEEEECCTTSCHHHHHHHHHH-----HHTCEEECHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHH-----HHCCEEECHHH
T ss_conf 99888899988999987999999999-----86990763899
No 283
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=21.31 E-value=29 Score=12.61 Aligned_cols=79 Identities=11% Similarity=0.075 Sum_probs=40.5
Q ss_pred HHHHHHHHCCCCCEECCCCC------CCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHC
Q ss_conf 78998873488532505855------773479999986200343355532785663117888753312475222200215
Q gi|254780442|r 177 EDLHAALQTCEVDWVALSFI------QSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEM 250 (480)
Q Consensus 177 ~di~~a~~~~~vD~ialSfV------r~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~ 250 (480)
+.++.+.+ .|+|.|-+.+. .....+.++|+.+.+.++.+.+ +. ..++..+.+-
T Consensus 40 e~l~~aae-~GfdgVEl~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~-i~-------------------~~~~~~~~~~ 98 (296)
T 2g0w_A 40 KRVKVAAE-NGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTE-VE-------------------YITQWGTAED 98 (296)
T ss_dssp HHHHHHHH-TTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEE-EE-------------------CBCCCSSTTT
T ss_pred HHHHHHHH-HCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE-EE-------------------CCCCCCCCHH
T ss_conf 99999999-697999974532300044689999999999971997999-86-------------------5545578707
Q ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 87673689999999985139839980
Q gi|254780442|r 251 ALELIPGIQKKLIRIARQLGKPVVIA 276 (480)
Q Consensus 251 ~~e~vp~~Qk~ii~~~~~~~kpvivA 276 (480)
..++....-++.+..|..+|.+.++.
T Consensus 99 ~~~~~~~~~~~~i~~a~~lg~~~v~~ 124 (296)
T 2g0w_A 99 RTAEQQKKEQTTFHMARLFGVKHINC 124 (296)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 89999999999999999719998964
No 284
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics, protein structure initiative; 2.89A {Clostridium difficile 630}
Probab=21.29 E-value=29 Score=12.61 Aligned_cols=73 Identities=14% Similarity=0.044 Sum_probs=36.9
Q ss_pred HHCCCCCEEEEE----CCCHHHHHHHHHHCCCCCEEEEECC-HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 610478689997----0883799999841888869999299-8999876665393799936879999999999999998
Q gi|254780442|r 367 AETLRLSAIFCY----TASGATGLRAARERPKLEIIALSPM-IQTARRLALVWGIHCVVTEDASDSDDMVNRACRIVVE 440 (480)
Q Consensus 367 A~~l~a~aIiv~----T~sG~tA~~iS~~RP~~pIiaiT~~-~~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~~ 440 (480)
...-..++|++- ..+|.....--+-+|.+||+.+|.. ....+.-.+--|+.-++.++++ .++........++.
T Consensus 44 l~~~~~dlillD~~mP~~dG~el~~~~~~~~~~piI~lt~~~~~~~~~~al~~Ga~dyl~KP~~-~~~L~~~i~~~lrR 121 (136)
T 2qzj_A 44 IFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYINEDQSILNALNSGGDDYLIKPLN-LEILYAKVKAILRR 121 (136)
T ss_dssp HHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCCHHHHHHHHHTTCCEEEESSCC-HHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCEEEECCCC-HHHHHHHHHHHHHH
T ss_conf 8627999999779998998607999998369998999996289999999998699889989899-99999999999997
No 285
>2poc_A D-fructose-6-, isomerase domain of glutamine-fructose-6- phosphate transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans SC5314} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=20.97 E-value=30 Score=12.56 Aligned_cols=47 Identities=6% Similarity=-0.050 Sum_probs=19.2
Q ss_pred EECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEE
Q ss_conf 2505855773479999986200343355532785663117888753312475
Q gi|254780442|r 190 WVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMV 241 (480)
Q Consensus 190 ~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimi 241 (480)
.|++|---+..++.++-+...+.+..+++=-.+..+ .+.+.+|..+.
T Consensus 101 vI~iSqSG~T~etv~a~~~ak~~ga~~i~itn~~~S-----~l~~~~d~~i~ 147 (367)
T 2poc_A 101 CVFVSQSGETADSILALQYCLERGALTVGIVNSVGS-----SMSRQTHCGVH 147 (367)
T ss_dssp EEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTS-----HHHHHSSEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCC-----HHHHCCCCEEE
T ss_conf 999749989789999999999759969999678885-----66633674366
No 286
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus HB27} PDB: 3bk1_A*
Probab=20.87 E-value=30 Score=12.55 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=18.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 899988888989999999999999997499279999
Q gi|254780442|r 33 VFRINMSHTSHDKMCELIKKIRAVELRSRRPIGILI 68 (480)
Q Consensus 33 v~RiN~SHg~~e~~~~~i~~ir~~~~~~~~~i~Il~ 68 (480)
+-=+=.||+ |++|.-.+.++-..-...+..++|++
T Consensus 75 i~ai~lTHa-H~DH~Galp~Ll~~~~~~~~~~PIY~ 109 (562)
T 3bk2_A 75 IKAWVLTHG-HEDHIGGLPFLLPMIFGKESPVPIYG 109 (562)
T ss_dssp EEEEECCCC-CHHHHTTHHHHHHHHHCSCCCSEEEE
T ss_pred CEEEEECCC-CHHHHCCHHHHHHHHCCCCCCCCEEC
T ss_conf 259997998-55653772878875214568858887
No 287
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.75 E-value=30 Score=12.53 Aligned_cols=52 Identities=15% Similarity=0.178 Sum_probs=28.1
Q ss_pred HHHHHHHHHCCCCEEEEEC---CCCCHH------HHHHHHHHHHHHHHHCCCCEEEEEECCCCEE
Q ss_conf 9999999973997899988---888989------9999999999999974992799998789867
Q gi|254780442|r 20 EDVINRLHEEGTDVFRINM---SHTSHD------KMCELIKKIRAVELRSRRPIGILIDLQGPKF 75 (480)
Q Consensus 20 ~e~i~~l~~aG~nv~RiN~---SHg~~e------~~~~~i~~ir~~~~~~~~~i~Il~Dl~Gpki 75 (480)
++.|++|-++|+|..|.=. +|...+ ....+-..++ ++.+.|-.| ++-+||-+
T Consensus 40 ~~~l~~~K~~G~N~Vrtyv~Wn~HeP~~g~~df~g~~dl~~fl~-la~e~GL~V---ilr~gpyi 100 (612)
T 3d3a_A 40 EHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCR-LAQENGMYV---IVRPGPYV 100 (612)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHH-HHHHTTCEE---EEECCSCC
T ss_pred HHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCCCCCCHHHHHH-HHHHCCCEE---EEECCCCC
T ss_conf 99999999729989996063521388788157544015999999-999859999---99558745
No 288
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), structural genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=20.67 E-value=30 Score=12.52 Aligned_cols=46 Identities=15% Similarity=0.214 Sum_probs=33.1
Q ss_pred HHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHH
Q ss_conf 9999999851398399805767888828898403477899998519968998144435446589999
Q gi|254780442|r 259 QKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLSAETASGSYPVDAVR 325 (480)
Q Consensus 259 Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs~ETa~G~yP~~~v~ 325 (480)
-..+++.+++.|++|++-| ++. . +.++.+..|+|||+ -.||...++
T Consensus 187 ~~~~v~~~~~~G~~v~~wT------VN~-----~---e~~~~~~~GVdgIi-------TD~P~l~~~ 232 (234)
T 1o1z_A 187 AVEVLRSFRKKGIVIFVWT------LND-----P---EIYRKIRREIDGVI-------TDEVELFVK 232 (234)
T ss_dssp HHHHHHHHHHTTCEEEEES------CCC-----H---HHHHHHGGGCSEEE-------ESCHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEC------CCH-----H---HHHHHHHCCCCEEE-------ECCHHHHHH
T ss_conf 7999999998799899988------986-----9---99999975999999-------774999986
No 289
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=20.63 E-value=30 Score=12.51 Aligned_cols=54 Identities=13% Similarity=0.169 Sum_probs=33.6
Q ss_pred HCCCCCEEEEECCCHHHH----HHHHHHCCCCCEEEEECCHHHHHHHHHHCCCEEEEEC
Q ss_conf 104786899970883799----9998418888699992998999876665393799936
Q gi|254780442|r 368 ETLRLSAIFCYTASGATG----LRAARERPKLEIIALSPMIQTARRLALVWGIHCVVTE 422 (480)
Q Consensus 368 ~~l~a~aIiv~T~sG~tA----~~iS~~RP~~pIiaiT~~~~t~r~l~L~~GV~p~~~~ 422 (480)
.--+|+++++.|.+-... ..+-.+-|.++|++-+.++.....|... |+.-+..+
T Consensus 68 ~i~~a~~vi~~t~~d~~n~~~~l~~r~~~~~~~iia~~~~~~~~~~l~~~-G~d~vi~p 125 (153)
T 1id1_A 68 GIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMV-HPDIILSP 125 (153)
T ss_dssp TTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHHTT-CCSEEECH
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHC-CCCEEECH
T ss_conf 98833899998698799999999999978998399998898999999977-98999988
No 290
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=20.63 E-value=30 Score=12.51 Aligned_cols=49 Identities=10% Similarity=0.137 Sum_probs=31.4
Q ss_pred HHCCCCCEEEEECC-HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 41888869999299-899987666539379993687999999999999999
Q gi|254780442|r 390 RERPKLEIIALSPM-IQTARRLALVWGIHCVVTEDASDSDDMVNRACRIVV 439 (480)
Q Consensus 390 ~~RP~~pIiaiT~~-~~t~r~l~L~~GV~p~~~~~~~~~~~~i~~a~~~l~ 439 (480)
+..+.+||+++|-+ ....+...+--|..-++.+++ +.++..+....++.
T Consensus 197 ~~~~~~pii~lta~~~~~~~~~~~~~G~~~~l~KP~-~~~~L~~~l~~~l~ 246 (254)
T 2ayx_A 197 QLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPV-TLDVIKQTLTLYAE 246 (254)
T ss_dssp HHHCCSCEEEEESSTTSHHHHHHHHCCCEEEEESSC-CHHHHHHHHHHHHH
T ss_pred HHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHHHHH
T ss_conf 629999799998999999999999869989997989-99999999999999
No 291
>1ds6_B RHO GDP-dissociation inhibitor 2; beta sandwhich, protein-protein complex, G-domain, immunoglobulin fold, walker fold, GTP-binding protein; HET: GDP; 2.35A {Homo sapiens} SCOP: b.1.18.8 PDB: 1fst_A
Probab=20.45 E-value=19 Score=13.92 Aligned_cols=13 Identities=23% Similarity=0.496 Sum_probs=5.9
Q ss_pred CEEECCCCEEEEE
Q ss_conf 1896589999995
Q gi|254780442|r 84 KVDLTEGQIFTLD 96 (480)
Q Consensus 84 ~i~l~~G~~v~l~ 96 (480)
++.+++|..+.+.
T Consensus 77 ~f~IKEGs~Y~~~ 89 (180)
T 1ds6_B 77 TIVLKEGSEYRVK 89 (180)
T ss_dssp EEEEETTCEEEEE
T ss_pred CEEECCCCEEEEE
T ss_conf 8894699879999
No 292
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=20.31 E-value=31 Score=12.47 Aligned_cols=123 Identities=15% Similarity=0.158 Sum_probs=59.1
Q ss_pred HHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH--HHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 985199689981444354465899999999887630101244444--432038788887899999999861047868999
Q gi|254780442|r 300 AVFEEADAIMLSAETASGSYPVDAVRTMSLVASSAERDSSWLEMR--SLRRIEPNETGADVISSAARQIAETLRLSAIFC 377 (480)
Q Consensus 300 av~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~E~~~~~~~~~--~~~~~~~~~~~~~aIa~aav~lA~~l~a~aIiv 377 (480)
++++|-| ++..+.|..||--.=.+-.+.++.............. ..--.-|.......+..-...++...+.+...+
T Consensus 56 ~il~g~d-vi~~A~TGsGKTlayllP~l~~i~~~~~~~~~~~~~~~~~alIl~PTreL~~qv~~~~~~~~~~~~~~~~~~ 134 (253)
T 1wrb_A 56 AILEHRD-IMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVV 134 (253)
T ss_dssp HHHTTCC-EEEECCTTSSHHHHHHHHHHHHHHTTCC------CCBCCSEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEE
T ss_pred HHHCCCC-EEEECCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 9977998-899825999973166179999987312112345667884799975777775302455442125788469999
Q ss_pred ECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH----CCCEEEEECCCC
Q ss_conf 708837999998418888699992998999876665----393799936879
Q gi|254780442|r 378 YTASGATGLRAARERPKLEIIALSPMIQTARRLALV----WGIHCVVTEDAS 425 (480)
Q Consensus 378 ~T~sG~tA~~iS~~RP~~pIiaiT~~~~t~r~l~L~----~GV~p~~~~~~~ 425 (480)
...+.... .....+..+.|+.-||. +..+.+.-. +.+.-+.+++.+
T Consensus 135 ~g~~~~~~-~~~~~~~~~~ilV~TP~-~l~~~~~~~~~~l~~l~~lVlDEaD 184 (253)
T 1wrb_A 135 YGGADTHS-QIREVQMGCHLLVATPG-RLVDFIEKNKISLEFCKYIVLDEAD 184 (253)
T ss_dssp CSSSCSHH-HHHHHSSCCSEEEECHH-HHHHHHHTTSBCCTTCCEEEEETHH
T ss_pred ECCCCHHH-HHHHHCCCCEEEEECHH-HHHHHHHCCCEECCCCEEEEEEHHH
T ss_conf 57977599-99986269719997809-9888883692745632499866577
No 293
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=20.20 E-value=31 Score=12.45 Aligned_cols=46 Identities=22% Similarity=0.486 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHH----HHHHHHHCCCEEEEEH
Q ss_conf 311788875331247522220021587673689999----9999851398399805
Q gi|254780442|r 226 IEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKK----LIRIARQLGKPVVIAT 277 (480)
Q Consensus 226 l~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~----ii~~~~~~~kpvivAT 277 (480)
++.+.+.++ ++-.+|=|..|.+...+ .|++ .+..|.++++||++=+
T Consensus 81 ~~~l~~~l~--~~~~vaIGEiGLD~~~~----~Q~~vf~~ql~lA~e~~~Pv~iH~ 130 (261)
T 3guw_A 81 YEFVLGYLE--EGEWVAFGEIGLELVTD----EEIEVLKSQLELAKRMDVPCIIHT 130 (261)
T ss_dssp THHHHHHHT--TSCCSCEEEEECSSCCH----HHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHC--CCCEEEEECCCCCCCCH----HHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 999999852--59868993453787755----689999999999985477679984
No 294
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=20.15 E-value=31 Score=12.44 Aligned_cols=81 Identities=15% Similarity=0.154 Sum_probs=49.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEC-----CCHH-HHHHHHHHC--CCCCEEEEECCHHHHHHHHHHCCCEEEEECC
Q ss_conf 8888789999999986104786899970-----8837-999998418--8886999929989998766653937999368
Q gi|254780442|r 352 NETGADVISSAARQIAETLRLSAIFCYT-----ASGA-TGLRAARER--PKLEIIALSPMIQTARRLALVWGIHCVVTED 423 (480)
Q Consensus 352 ~~~~~~aIa~aav~lA~~l~a~aIiv~T-----~sG~-tA~~iS~~R--P~~pIiaiT~~~~t~r~l~L~~GV~p~~~~~ 423 (480)
..+..+++. ...+...+.|++-- .+|. .++.+-+.. ...||+.+|......+...+-.|+.-++.++
T Consensus 35 a~~~~~al~-----~l~~~~pdliilD~~lp~~~~G~~l~~~ir~~~~~~~iPii~lt~~~~~~~~~a~~~Ga~dyl~KP 109 (127)
T 2gkg_A 35 TTDGKGSVE-----QIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVIIGNPDGFAQHRKLKAHADEYVAKP 109 (127)
T ss_dssp ECCHHHHHH-----HHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEEECGGGHHHHHHSTTCCSEEEESS
T ss_pred ECCHHHHHH-----HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEECC
T ss_conf 899999999-----998479999999757776888999999998388889983899968985999999986998999898
Q ss_pred CCCHHHHHHHHHHHH
Q ss_conf 799999999999999
Q gi|254780442|r 424 ASDSDDMVNRACRIV 438 (480)
Q Consensus 424 ~~~~~~~i~~a~~~l 438 (480)
+ +.++........+
T Consensus 110 ~-~~~~L~~~i~~~L 123 (127)
T 2gkg_A 110 V-DADQLVERAGALI 123 (127)
T ss_dssp C-CHHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHH
T ss_conf 9-9999999999987
No 295
>3cpe_A Terminase, DNA packaging protein GP17; large terminase, alternative initiation, ATP-binding, DNA- binding, hydrolase, nuclease; HET: DNA; 2.80A {Bacteriophage T4} PDB: 3ezk_A*
Probab=20.03 E-value=27 Score=12.90 Aligned_cols=14 Identities=14% Similarity=0.290 Sum_probs=6.7
Q ss_pred CCEEECCCCEEEEE
Q ss_conf 81896589999995
Q gi|254780442|r 83 SKVDLTEGQIFTLD 96 (480)
Q Consensus 83 ~~i~l~~G~~v~l~ 96 (480)
..+++..|..+...
T Consensus 249 ~~i~~~Ngs~i~~~ 262 (592)
T 3cpe_A 249 GSIELDNGSSIGAY 262 (592)
T ss_dssp SEEEETTSCEEEEE
T ss_pred CEEEECCCCEEEEE
T ss_conf 12674587258750
No 296
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=20.00 E-value=31 Score=12.42 Aligned_cols=147 Identities=12% Similarity=0.132 Sum_probs=74.1
Q ss_pred EEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCC---EEECCCCCCCCEEEEEECCCCEEECCCCCCC
Q ss_conf 8965899999953245564442212664422211336526740684---2210234454112455138808711456446
Q gi|254780442|r 85 VDLTEGQIFTLDNKDSLGSSDRVMLPHPEIFASIKIGDRLLIDDGR---VKLCVQEKGIGFIKCKVIAGISIADRKGISF 161 (480)
Q Consensus 85 i~l~~G~~v~l~~~~~~~~~~~i~i~y~~l~~~ik~Gd~I~idDG~---i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvni 161 (480)
-++.+|+.+.|+.++.. ++ .+.. -+++||.|.+-||. ...++.+++++.+.+++.. .+.....-..
T Consensus 13 ~~l~~~~~i~L~~~~~h----Hl----~kVL-R~k~Gd~i~v~dg~G~~~~a~I~~i~k~~~~~~~~~--~~~~~~~~~~ 81 (268)
T 1vhk_A 13 QQIEEAPTFSITGEEVH----HI----VNVM-RMNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIE--WTNENRELPI 81 (268)
T ss_dssp HHHHSSSSEEEESHHHH----HH----HTTT-CCCTTCEEEEECTTSCEEEEEEEEECSSEEEEEEEE--ECCCCCCCSS
T ss_pred HHCCCCCEEEECHHHHH----HH----HHCC-CCCCCCEEEEEECCCCEEEEEEEEEECCCEEEEEEE--ECCCCCCCCC
T ss_conf 67156997996889988----99----9707-889999999992899889999999506743344432--0024668974
Q ss_pred CCCCC--CCCCCCHHHHHHHHHHHHCCCCCEECCCCCC-C----C-----HHHHHHHHHH----HCCCCEEEEEECCHHH
Q ss_conf 78544--5556765567789988734885325058557-7----3-----4799999862----0034335553278566
Q gi|254780442|r 162 PDTFL--TTQALTQKDREDLHAALQTCEVDWVALSFIQ-S----A-----DDLLEIRKII----SQNKIGLMSKIEKPRA 225 (480)
Q Consensus 162 p~~~i--~l~~ltekD~~di~~a~~~~~vD~ialSfVr-~----~-----~di~~~r~~l----~~~~~~IiaKIE~~~a 225 (480)
...+ .+|.. ++-...++-+.+ +||+-|..=+.. + . .-....++++ .+.+-..+.+|+.+..
T Consensus 82 -~i~L~~~l~k~-~~~e~ii~katE-LGV~~I~p~~sers~~~~~~~~~~~k~eR~~~ii~eA~eQsgr~~lP~I~~~~~ 158 (268)
T 1vhk_A 82 -KVYIASGLPKG-DKLEWIIQKGTE-LGAHAFIPFQAARSVVKLDDKKAKKKRERWTKIAKEAAEQSYRNEVPRVMDVHS 158 (268)
T ss_dssp -EEEEEEECCST-THHHHHHHHHHH-TTCCEEEEECCTTCCCC---------HHHHHHHHHHHHHHTTCSSCCEECCCBC
T ss_pred -CEEEEEEEECC-CHHHHHHHHHHH-HCCCEEEEEHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf -25799842167-528889988783-272567810103012212220556409999999999999719998767974369
Q ss_pred HHHHHHHHHHHHEEEEECCC
Q ss_conf 31178887533124752222
Q gi|254780442|r 226 IEYASEIIQLSDAVMVARGD 245 (480)
Q Consensus 226 l~nl~eI~~~sDgimiaRGD 245 (480)
++++-+-....+...++-..
T Consensus 159 l~~~l~~~~~~~~~~~~~~~ 178 (268)
T 1vhk_A 159 FQQLLQRMQDFDKCVVAYEE 178 (268)
T ss_dssp HHHHHHHGGGSSEEEEECC-
T ss_pred HHHHHHHCCCCCCEEEECCC
T ss_conf 99999728667948997420
Done!