HHsearch alignment for GI: 254780443 and conserved domain: COG5480

Probab=100.00  E-value=4.3e-43  Score=272.89  Aligned_cols=119  Identities=48%  Similarity=1.090  Sum_probs=114.3

Q ss_pred             CCCCCCCEEEECCCCCEEEEEEEEECCCCCEEEEEEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECC
Q ss_conf             68354722983189984899999974888578754688578870374056766747999999538871205750136507
Q gi|254780443|r   18 SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQ   97 (141)
Q Consensus        18 ~~~A~A~~~vCN~T~~~v~vAigy~~~~~~W~seGWw~i~pg~C~~vl~g~l~~r~yY~yAe~~~~~~~w~G~~~~Cv~~   97 (141)
T Consensus        28 a~sa~adfrvCN~t~~~v~vAiGyr~~-ngwvtEGWW~v~~~~Cv~~ie~~lt~ry~ylyA~d~~~~a~~~Gsi~mCv~~  106 (147)
T COG5480          28 APSAHADFRVCNYTQTLVGVAIGYRAK-NGWVTEGWWVVEASECVTLIEGELTSRYYYLYAEDAKGGARWAGSINMCVAE  106 (147)
T ss_pred             CCCCCCCEEECHHHHHHHHEEEEEECC-CCCEECCEEEECCCEEEEEECCCCEEEEEEEECCCHHCCCEECCCEEEEEEC
T ss_conf             578210026500032122114423448-8864454499559615887401000147767715511075762746478860


Q ss_pred             CCEEEECCCCHHHCCCCCCCCEEEEECCCCEEEEEEECCC
Q ss_conf             5325525310122784002828876079751789970765
Q gi|254780443|r   98 DEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPA  137 (141)
Q Consensus        98 ~~F~i~g~~dC~~RG~~~~~F~evDtg~~~~wTv~Lt~p~  137 (141)
T Consensus       107 ~rF~I~gv~Dc~arg~~a~gf~e~dt~~q~sw~v~ls~~p  146 (147)
T COG5480         107 DRFKIFGVQDCFARGFQAAGFNEYDTGEQASWMVQLSDSP  146 (147)
T ss_pred             CEEEEECCHHHHHHHHHHCCCEEECCCCCCEEEEEECCCC
T ss_conf             4568963278888887734761320477824999955889