BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780443|ref|YP_003064856.1| hypothetical protein
CLIBASIA_01640 [Candidatus Liberibacter asiaticus str. psy62]
(141 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780443|ref|YP_003064856.1| hypothetical protein CLIBASIA_01640 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040120|gb|ACT56916.1| hypothetical protein CLIBASIA_01640 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 141
Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT
Sbjct: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE
Sbjct: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
Query: 121 YDTGQHENWTVQLTEPAQDRR 141
YDTGQHENWTVQLTEPAQDRR
Sbjct: 121 YDTGQHENWTVQLTEPAQDRR 141
>gi|315122108|ref|YP_004062597.1| hypothetical protein CKC_01790 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495510|gb|ADR52109.1| hypothetical protein CKC_01790 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 139
Score = 217 bits (552), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 97/139 (69%), Positives = 113/139 (81%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
M+R FLIC G MI S+VS+AGFRVCNGTKNLIGVA+GYP G W T+GWW IP N+
Sbjct: 1 MIRGFLICIFLGTMIIFSSVSYAGFRVCNGTKNLIGVAIGYPLSNGHWTTQGWWHIPKNS 60
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
CET+++GAL SRYYYL+ EG+SH E W GNVQMCVG+DEF IVDIK+CY RGYLR F E
Sbjct: 61 CETIIEGALSSRYYYLHVEGISHGERWLGNVQMCVGEDEFTIVDIKDCYARGYLRASFIE 120
Query: 121 YDTGQHENWTVQLTEPAQD 139
YDTGQHE+WTVQLTE + +
Sbjct: 121 YDTGQHESWTVQLTESSLE 139
>gi|218682191|ref|ZP_03529792.1| hypothetical protein RetlC8_25245 [Rhizobium etli CIAT 894]
Length = 158
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 96/132 (72%), Gaps = 3/132 (2%)
Query: 6 LICFCFGAMI--FCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
L F A++ F ++ + A FRVCNGT+NL+GVA+GY A K GWMTEGWWQ+P TC T
Sbjct: 19 LALFALAAIMPFFIADAARADFRVCNGTQNLVGVAIGYRA-KDGWMTEGWWQVPATTCAT 77
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+++G L SRYYYLYAE + W G+VQMCV ++EF I +++CY RGY ++GF EYDT
Sbjct: 78 LIEGELQSRYYYLYAEDAARGGRWTGDVQMCVAENEFKITGVQDCYARGYQKMGFKEYDT 137
Query: 124 GQHENWTVQLTE 135
G+ +W VQL++
Sbjct: 138 GRQGSWMVQLSD 149
>gi|209550866|ref|YP_002282783.1| hypothetical protein Rleg2_3290 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536622|gb|ACI56557.1| protein of unknown function DUF1036 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 157
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
Query: 6 LICFCFGAMI--FCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
L F A + F ++ + A FRVCNGT+NL+GVA+GY A K GWMTEGWWQ+P TC
Sbjct: 18 LALFALAAFMPFFIADAARADFRVCNGTQNLVGVAIGYRA-KDGWMTEGWWQVPATTCAV 76
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+++G L SRYYYLYAE + W G+VQMCV ++EF I +++CY RGY ++GF EYDT
Sbjct: 77 LIEGELQSRYYYLYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQKMGFKEYDT 136
Query: 124 GQHENWTVQLTE 135
G+ +W VQL++
Sbjct: 137 GRQGSWMVQLSD 148
>gi|190893368|ref|YP_001979910.1| hypothetical protein RHECIAT_CH0003794 [Rhizobium etli CIAT 652]
gi|190698647|gb|ACE92732.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 161
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 95/132 (71%), Gaps = 3/132 (2%)
Query: 6 LICFCFGAMI--FCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
L F A + F ++ + A FRVCNGT+NL+GVA+GY A K GW+TEGWWQ+P TC T
Sbjct: 22 LALFALAAFMPFFIADAARADFRVCNGTQNLVGVAIGYRA-KDGWVTEGWWQVPATTCAT 80
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+++G L SRYYYLYAE + W G+VQMCV ++EF I +++CY RGY ++GF EYDT
Sbjct: 81 LIEGELQSRYYYLYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQKMGFKEYDT 140
Query: 124 GQHENWTVQLTE 135
G+ +W VQL++
Sbjct: 141 GRQGSWMVQLSD 152
>gi|86359134|ref|YP_471026.1| hypothetical protein RHE_CH03543 [Rhizobium etli CFN 42]
gi|86283236|gb|ABC92299.1| hypothetical conserved membrane protein [Rhizobium etli CFN 42]
Length = 161
Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 91/120 (75%), Gaps = 1/120 (0%)
Query: 16 FCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYY 75
F ++ + A FRVCNGT+NL+GVA+GY A K GW+TEGWWQ+P TC T+++G L SRYYY
Sbjct: 34 FIADAARADFRVCNGTQNLVGVAIGYRA-KDGWITEGWWQVPATTCATLIEGELQSRYYY 92
Query: 76 LYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
LYAE + W G+VQMCV ++EF I +++CY RGY ++GF EYDTG+ +W VQL++
Sbjct: 93 LYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQKMGFKEYDTGRQGSWMVQLSD 152
>gi|116253800|ref|YP_769638.1| hypothetical protein RL4061 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258448|emb|CAK09551.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 161
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 91/120 (75%), Gaps = 1/120 (0%)
Query: 16 FCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYY 75
F ++ + A FRVCNGT+NL+GVA+GY A K GW+TEGWWQ+P TC T+++G L SRYYY
Sbjct: 34 FIADAARADFRVCNGTQNLVGVAIGYRA-KDGWVTEGWWQVPATTCATLIEGELQSRYYY 92
Query: 76 LYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
LYAE + W G+VQMCV ++EF I +++CY RGY ++GF EYDTG+ +W VQL++
Sbjct: 93 LYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQKMGFKEYDTGRQGSWMVQLSD 152
>gi|241206280|ref|YP_002977376.1| hypothetical protein Rleg_3591 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860170|gb|ACS57837.1| protein of unknown function DUF1036 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 157
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
F ++ + A FRVCNGT+NL+GVA+GY A K GW+TEGWWQ+P TC T+++G L SRYY
Sbjct: 29 FFIADAARADFRVCNGTQNLVGVAIGYRA-KDGWVTEGWWQVPATTCATLIEGELQSRYY 87
Query: 75 YLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
YLYAE + W G+VQMCV ++EF I +++CY RGY ++GF EYDTG+ +W VQL+
Sbjct: 88 YLYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQKMGFKEYDTGRQGSWMVQLS 147
Query: 135 E 135
+
Sbjct: 148 D 148
>gi|218663145|ref|ZP_03519075.1| hypothetical protein RetlI_29289 [Rhizobium etli IE4771]
Length = 131
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
F ++ + A FRVCNGT+NL+GVA+GY A K GW+TEGWWQ+P TC T+++G L SRYY
Sbjct: 3 FFIADAARADFRVCNGTQNLVGVAIGYRA-KDGWVTEGWWQVPATTCATLIEGELQSRYY 61
Query: 75 YLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
YLYAE + W G+VQMCV ++EF I +++CY RGY ++GF EYDTG+ +W VQL+
Sbjct: 62 YLYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQKMGFKEYDTGRQGSWMVQLS 121
Query: 135 E 135
+
Sbjct: 122 D 122
>gi|15966543|ref|NP_386896.1| hypothetical protein SMc04006 [Sinorhizobium meliloti 1021]
gi|307300420|ref|ZP_07580200.1| protein of unknown function DUF1036 [Sinorhizobium meliloti BL225C]
gi|307318285|ref|ZP_07597720.1| protein of unknown function DUF1036 [Sinorhizobium meliloti AK83]
gi|15075814|emb|CAC47369.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306895967|gb|EFN26718.1| protein of unknown function DUF1036 [Sinorhizobium meliloti AK83]
gi|306904586|gb|EFN35170.1| protein of unknown function DUF1036 [Sinorhizobium meliloti BL225C]
Length = 145
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
L A + + A FRVCNGT+ L+GVA+GY A K GW+TEGWWQ+P TC T+
Sbjct: 7 LLFSLAISASFLSAGDARADFRVCNGTQTLVGVAIGYRA-KEGWVTEGWWQVPATTCATL 65
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SRYYYLYAE + W G+V MCV ++EF IV +++C+ RG+ R+GF EYDTG
Sbjct: 66 IEGELQSRYYYLYAEDAAKGGRWTGDVNMCVAENEFKIVGVQDCFARGFQRMGFKEYDTG 125
Query: 125 QHENWTVQLTE 135
+ +W VQL++
Sbjct: 126 RQGSWMVQLSD 136
>gi|222087049|ref|YP_002545584.1| hypothetical protein Arad_3784 [Agrobacterium radiobacter K84]
gi|221724497|gb|ACM27653.1| conserved hypothetical membrane protein [Agrobacterium radiobacter
K84]
Length = 181
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
A FRVCNGT+NL+GVA+GY A K GW TEGWWQ+P TC T+++G L SRYYYLYAE +
Sbjct: 61 ADFRVCNGTQNLVGVAIGYRA-KEGWTTEGWWQVPATTCATLIEGPLQSRYYYLYAEDAA 119
Query: 83 HSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
W G+V+MCV ++EF I +K+CY RG+ ++GF EYDTG+ +W VQL++
Sbjct: 120 RGGRWTGDVEMCVAENEFKIPGVKDCYARGFQKMGFKEYDTGRQASWMVQLSD 172
>gi|114704356|ref|ZP_01437264.1| hypothetical conserved membrane protein [Fulvimarina pelagi
HTCC2506]
gi|114539141|gb|EAU42261.1| hypothetical conserved membrane protein [Fulvimarina pelagi
HTCC2506]
Length = 136
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Query: 12 GAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
G F ++ + A FRVCNGT NL+GVA+GY A + GW +EGWW+IP TC+ ++ G L S
Sbjct: 5 GLAFFGADDARADFRVCNGTANLVGVAIGYRA-EAGWTSEGWWRIPAETCKPLITGQLKS 63
Query: 72 RYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTV 131
RYYYLYAE + WAG + +CV ++EF I + C RGY R+GF E+DTG+ E+W V
Sbjct: 64 RYYYLYAEDANGEARWAGEIDLCVAENEFRIAGVSECLKRGYQRMGFREFDTGEQESWMV 123
Query: 132 QLTEPAQ 138
QLTEP +
Sbjct: 124 QLTEPPR 130
>gi|150397875|ref|YP_001328342.1| hypothetical protein Smed_2677 [Sinorhizobium medicae WSM419]
gi|150029390|gb|ABR61507.1| protein of unknown function DUF1036 [Sinorhizobium medicae WSM419]
Length = 145
Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
L + + A FRVCNGT+ L+GVA+GY A K GW+TEGWWQ+P TC T+
Sbjct: 7 LLFSLAVSVPFLSAGAARADFRVCNGTQTLVGVAIGYRA-KEGWVTEGWWQVPATTCATL 65
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SRYYYLYAE + W G+V MCV ++EF IV +++C+ RG+ R+GF EYDTG
Sbjct: 66 IEGELQSRYYYLYAEDAAKGGRWTGDVNMCVAENEFKIVGVQDCFARGFQRMGFKEYDTG 125
Query: 125 QHENWTVQLTE 135
+ +W VQL++
Sbjct: 126 RQGSWMVQLSD 136
>gi|222149709|ref|YP_002550666.1| hypothetical protein Avi_3691 [Agrobacterium vitis S4]
gi|221736691|gb|ACM37654.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 204
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 91/131 (69%), Gaps = 2/131 (1%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
+ F + + + A FRVCNG+ NL+GVA+GY A +G W++EGWWQ+P +TC T+
Sbjct: 66 LFLTIVFSPIAYAAPAQ-ADFRVCNGSANLVGVAIGYRAAEG-WISEGWWQVPASTCATL 123
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SRYYYLYAE + W GNV MCV ++EF IV + +C+ RGY ++GF EYDTG
Sbjct: 124 IEGELKSRYYYLYAEDAARGGRWTGNVNMCVAENEFKIVGVGDCFKRGYQQMGFKEYDTG 183
Query: 125 QHENWTVQLTE 135
+ +W VQL++
Sbjct: 184 RQGSWMVQLSD 194
>gi|227823363|ref|YP_002827335.1| hypothetical protein NGR_c28360 [Sinorhizobium fredii NGR234]
gi|227342364|gb|ACP26582.1| hypothetical protein NGR_c28360 [Sinorhizobium fredii NGR234]
Length = 158
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
L S + A FRVCNGT+ L+GVA+GY A K GW+TEGWWQ+P TC T+
Sbjct: 20 LLYSLVVSGAFLISGEARADFRVCNGTQQLVGVAIGYRA-KEGWVTEGWWQVPATTCATL 78
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SRYYYLYAE + W G++ MCV ++EF I +++C+ RG+ R+GF EYDTG
Sbjct: 79 IEGELQSRYYYLYAEDAAKGGRWTGDINMCVAENEFKIAGVQDCFARGFQRMGFKEYDTG 138
Query: 125 QHENWTVQLTE 135
+ +W VQL++
Sbjct: 139 RQGSWMVQLSD 149
>gi|332716494|ref|YP_004443960.1| hypothetical protein AGROH133_12128 [Agrobacterium sp. H13-3]
gi|325063179|gb|ADY66869.1| hypothetical protein AGROH133_12128 [Agrobacterium sp. H13-3]
Length = 160
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+ R F F + A FRVCN T+NL+GVA+GY A + GW++EGWWQ+P +T
Sbjct: 18 LARLFSAAALFLTPFVFVEAAHADFRVCNSTQNLVGVAIGYRA-QDGWVSEGWWQVPSST 76
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C T+++G L SRYYYLYAE +H W G+V MCV ++EF I + +CY R + R+GF E
Sbjct: 77 CATLIEGELQSRYYYLYAEDAAHGGRWTGDVNMCVAENEFKIAGVDDCYARSFQRMGFKE 136
Query: 121 YDTGQHENWTVQLTE 135
YDTG+ +W VQL++
Sbjct: 137 YDTGRQGSWMVQLSD 151
>gi|90418909|ref|ZP_01226820.1| conserved hypothetical protein, possible membrane protein
[Aurantimonas manganoxydans SI85-9A1]
gi|90336989|gb|EAS50694.1| conserved hypothetical protein, possible membrane protein
[Aurantimonas manganoxydans SI85-9A1]
Length = 157
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
Query: 16 FCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYY 75
++ + A FRVCNGT++L+GVA+GY A + GW TEGWW+IP TC+ +++G L SRYYY
Sbjct: 30 LTADAARADFRVCNGTQSLVGVAIGYRA-EAGWTTEGWWRIPATTCKAIIEGPLSSRYYY 88
Query: 76 LYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
+YAE WAG V +C+ ++EF I +K+C+ RGY ++GF EYDTG+ +W VQLTE
Sbjct: 89 VYAEDSDGQGRWAGPVNLCIAENEFKIAGVKDCFKRGYQKMGFREYDTGEQASWMVQLTE 148
Query: 136 PAQD 139
++
Sbjct: 149 APRE 152
>gi|15891189|ref|NP_356861.1| hypothetical protein Atu3761 [Agrobacterium tumefaciens str. C58]
gi|15159545|gb|AAK89646.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 179
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+ R F F + A FRVCN T+NL+GVA+GY A + GW++EGWWQ+P +T
Sbjct: 37 IARLFSAAALFLTPFIIVESAHADFRVCNSTQNLVGVAIGYRA-QDGWVSEGWWQVPSST 95
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C T+++G L SRYYYLYAE +H W G+V MCV ++EF I + +C+ R + R+GF E
Sbjct: 96 CATLIEGELQSRYYYLYAEDAAHGGRWTGDVNMCVAENEFKINGVDDCFARSFQRMGFKE 155
Query: 121 YDTGQHENWTVQLTE 135
YDTG+ +W VQL++
Sbjct: 156 YDTGRQGSWMVQLSD 170
>gi|254694405|ref|ZP_05156233.1| hypothetical protein Babob3T_07052 [Brucella abortus bv. 3 str.
Tulya]
gi|261214716|ref|ZP_05928997.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260916323|gb|EEX83184.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 153
Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 12 GAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++C+T+++G L S
Sbjct: 16 GALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSSCKTLIEGPLTS 74
Query: 72 RYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTV 131
RYYYLYAE W G V MCV + EF I +++C+ RG+ R GF EYDTG+ +W V
Sbjct: 75 RYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQEYDTGEQSSWMV 134
Query: 132 QLTE 135
QLT+
Sbjct: 135 QLTD 138
>gi|306844739|ref|ZP_07477324.1| Hypothetical protein BIBO1_1420 [Brucella sp. BO1]
gi|306274911|gb|EFM56681.1| Hypothetical protein BIBO1_1420 [Brucella sp. BO1]
Length = 153
Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 12 GAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++C+T+++G L S
Sbjct: 16 GALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSSCKTLIEGPLTS 74
Query: 72 RYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTV 131
RYYYLYAE W G V MCV + EF I +++C+ RG+ R GF EYDTG+ +W V
Sbjct: 75 RYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQEYDTGEQSSWMV 134
Query: 132 QLTE 135
QLT+
Sbjct: 135 QLTD 138
>gi|254719747|ref|ZP_05181558.1| hypothetical protein Bru83_09418 [Brucella sp. 83/13]
gi|265984763|ref|ZP_06097498.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839442|ref|ZP_07472250.1| Hypothetical protein BROD_2305 [Brucella sp. NF 2653]
gi|264663355|gb|EEZ33616.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405387|gb|EFM61658.1| Hypothetical protein BROD_2305 [Brucella sp. NF 2653]
Length = 153
Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Query: 11 FGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALH 70
GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++C+T+++G L
Sbjct: 15 MGALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSSCKTLIEGPLA 73
Query: 71 SRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWT 130
SRYYYLYAE W G V MCV + EF I +++C+ RG+ R GF EYDTG+ +W
Sbjct: 74 SRYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQEYDTGEQSSWM 133
Query: 131 VQLTE 135
VQLT+
Sbjct: 134 VQLTD 138
>gi|254714604|ref|ZP_05176415.1| hypothetical protein BcetM6_14957 [Brucella ceti M644/93/1]
gi|254717502|ref|ZP_05179313.1| hypothetical protein BcetM_14086 [Brucella ceti M13/05/1]
gi|261219334|ref|ZP_05933615.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261322395|ref|ZP_05961592.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260924423|gb|EEX90991.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261295085|gb|EEX98581.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 153
Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 12 GAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++C+T+++G L S
Sbjct: 16 GALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSSCKTLIEGPLTS 74
Query: 72 RYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTV 131
RYYYLYAE W G V MCV + EF I +++C+ RG+ R GF EYDTG+ +W V
Sbjct: 75 RYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQEYDTGEQSSWMV 134
Query: 132 QLTE 135
QLT+
Sbjct: 135 QLTD 138
>gi|23502606|ref|NP_698733.1| hypothetical protein BR1749 [Brucella suis 1330]
gi|62290620|ref|YP_222413.1| hypothetical protein BruAb1_1734 [Brucella abortus bv. 1 str.
9-941]
gi|82700536|ref|YP_415110.1| hypothetical protein BAB1_1762 [Brucella melitensis biovar Abortus
2308]
gi|148559464|ref|YP_001259598.1| hypothetical protein BOV_1689 [Brucella ovis ATCC 25840]
gi|161619675|ref|YP_001593562.1| hypothetical protein BCAN_A1787 [Brucella canis ATCC 23365]
gi|163845327|ref|YP_001622982.1| hypothetical protein BSUIS_B1225 [Brucella suis ATCC 23445]
gi|189024835|ref|YP_001935603.1| hypothetical protein BAbS19_I16470 [Brucella abortus S19]
gi|225628315|ref|ZP_03786349.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225853201|ref|YP_002733434.1| hypothetical protein BMEA_A1801 [Brucella melitensis ATCC 23457]
gi|237816122|ref|ZP_04595118.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254689913|ref|ZP_05153167.1| hypothetical protein Babob68_07049 [Brucella abortus bv. 6 str.
870]
gi|254700406|ref|ZP_05162234.1| hypothetical protein Bsuib55_06059 [Brucella suis bv. 5 str. 513]
gi|254703524|ref|ZP_05165352.1| hypothetical protein Bsuib36_06294 [Brucella suis bv. 3 str. 686]
gi|254708387|ref|ZP_05170215.1| hypothetical protein BpinM_15900 [Brucella pinnipedialis
M163/99/10]
gi|254708759|ref|ZP_05170570.1| hypothetical protein BpinB_00581 [Brucella pinnipedialis B2/94]
gi|254730947|ref|ZP_05189525.1| hypothetical protein Babob42_07077 [Brucella abortus bv. 4 str.
292]
gi|256030285|ref|ZP_05443899.1| hypothetical protein BpinM2_06501 [Brucella pinnipedialis
M292/94/1]
gi|256045355|ref|ZP_05448249.1| hypothetical protein Bmelb1R_12747 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256061783|ref|ZP_05451918.1| hypothetical protein Bneo5_15678 [Brucella neotomae 5K33]
gi|256114319|ref|ZP_05455057.1| hypothetical protein Bmelb3E_15965 [Brucella melitensis bv. 3 str.
Ether]
gi|256160458|ref|ZP_05458147.1| hypothetical protein BcetM4_15749 [Brucella ceti M490/95/1]
gi|256255665|ref|ZP_05461201.1| hypothetical protein BcetB_15573 [Brucella ceti B1/94]
gi|256258167|ref|ZP_05463703.1| hypothetical protein Babob9C_12651 [Brucella abortus bv. 9 str.
C68]
gi|256263307|ref|ZP_05465839.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|256370156|ref|YP_003107667.1| hypothetical protein BMI_I1768 [Brucella microti CCM 4915]
gi|260167959|ref|ZP_05754770.1| hypothetical protein BruF5_06257 [Brucella sp. F5/99]
gi|260547140|ref|ZP_05822878.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260565753|ref|ZP_05836236.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260568829|ref|ZP_05839297.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260755446|ref|ZP_05867794.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758668|ref|ZP_05871016.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260884462|ref|ZP_05896076.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261222869|ref|ZP_05937150.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261315887|ref|ZP_05955084.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316251|ref|ZP_05955448.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261325786|ref|ZP_05964983.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261750902|ref|ZP_05994611.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261754155|ref|ZP_05997864.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261757399|ref|ZP_06001108.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265987314|ref|ZP_06099871.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265991779|ref|ZP_06104336.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995619|ref|ZP_06108176.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265998828|ref|ZP_06111385.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294850996|ref|ZP_06791672.1| hypothetical protein BAZG_03129 [Brucella sp. NVSL 07-0026]
gi|297249015|ref|ZP_06932723.1| hypothetical protein BAYG_03057 [Brucella abortus bv. 5 str. B3196]
gi|23348610|gb|AAN30648.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196752|gb|AAX75052.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616637|emb|CAJ11718.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|148370721|gb|ABQ60700.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|161336486|gb|ABX62791.1| protein of unknown function DUF1036 [Brucella canis ATCC 23365]
gi|163676050|gb|ABY40160.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189020407|gb|ACD73129.1| hypothetical protein BAbS19_I16470 [Brucella abortus S19]
gi|225616161|gb|EEH13209.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225641566|gb|ACO01480.1| protein of unknown function DUF1036 [Brucella melitensis ATCC
23457]
gi|237788785|gb|EEP62997.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|256000319|gb|ACU48718.1| hypothetical protein BMI_I1768 [Brucella microti CCM 4915]
gi|260095505|gb|EEW79383.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260151126|gb|EEW86221.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260154213|gb|EEW89295.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260668986|gb|EEX55926.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260675554|gb|EEX62375.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873990|gb|EEX81059.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260921453|gb|EEX88106.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261295474|gb|EEX98970.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301766|gb|EEY05263.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261304913|gb|EEY08410.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261737383|gb|EEY25379.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261740655|gb|EEY28581.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261743908|gb|EEY31834.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262553517|gb|EEZ09286.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262766903|gb|EEZ12521.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263002735|gb|EEZ15138.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093278|gb|EEZ17375.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|264659511|gb|EEZ29772.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|294821639|gb|EFG38635.1| hypothetical protein BAZG_03129 [Brucella sp. NVSL 07-0026]
gi|297174148|gb|EFH33505.1| hypothetical protein BAYG_03057 [Brucella abortus bv. 5 str. B3196]
Length = 153
Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 12 GAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++C+T+++G L S
Sbjct: 16 GALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSSCKTLIEGPLTS 74
Query: 72 RYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTV 131
RYYYLYAE W G V MCV + EF I +++C+ RG+ R GF EYDTG+ +W V
Sbjct: 75 RYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQEYDTGEQSSWMV 134
Query: 132 QLTE 135
QLT+
Sbjct: 135 QLTD 138
>gi|110635584|ref|YP_675792.1| hypothetical protein Meso_3255 [Mesorhizobium sp. BNC1]
gi|110286568|gb|ABG64627.1| protein of unknown function DUF1036 [Chelativorans sp. BNC1]
Length = 158
Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Query: 1 MLRSFLI-CFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN 59
+ RS L+ G ++ + A FRVCN T+NL+GVA+GY A + GW++EGWW I +
Sbjct: 9 LQRSILVLAAAAGCLLMGGKPASADFRVCNTTQNLVGVAIGYRA-RTGWISEGWWHIKPS 67
Query: 60 TCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFT 119
+CET++ L SRYYYLYAE + W G +QMCV EF I +C+ RG+ R GF
Sbjct: 68 SCETLIDAPLESRYYYLYAEDATRGGRWQGPIQMCVSDTEFKITGANDCFKRGFQRAGFE 127
Query: 120 EYDTGQHENWTVQLTE 135
EYDTG ENW VQLT+
Sbjct: 128 EYDTGDQENWMVQLTD 143
>gi|13473276|ref|NP_104843.1| hypothetical protein mll3821 [Mesorhizobium loti MAFF303099]
gi|14024024|dbj|BAB50629.1| mll3821 [Mesorhizobium loti MAFF303099]
Length = 184
Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 88/134 (65%), Gaps = 2/134 (1%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
FL + I ++ + A FRVCN T+NL+GV +GY A K GW+TEGWW I G++C+T+
Sbjct: 39 FLTVAVGLSAIVMASPARADFRVCNATQNLVGVGIGYRA-KAGWITEGWWHIEGSSCKTL 97
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SR+YYLYAE W G + MCV + EF I + +C RG+ R GF EYDTG
Sbjct: 98 IEGPLSSRFYYLYAEDAERGGRWDGPINMCVAEKEFKIAGVNDCVARGFQRAGFQEYDTG 157
Query: 125 QHENWTVQLT-EPA 137
+ +W VQLT EPA
Sbjct: 158 EQASWMVQLTDEPA 171
>gi|17986574|ref|NP_539208.1| hypothetical protein BMEI0291 [Brucella melitensis bv. 1 str. 16M]
gi|306841467|ref|ZP_07474167.1| Hypothetical protein BIBO2_1253 [Brucella sp. BO2]
gi|17982184|gb|AAL51472.1| hypothetical protein BMEI0291 [Brucella melitensis bv. 1 str. 16M]
gi|306288431|gb|EFM59787.1| Hypothetical protein BIBO2_1253 [Brucella sp. BO2]
gi|326409760|gb|ADZ66825.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539474|gb|ADZ87689.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 145
Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 12 GAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++C+T+++G L S
Sbjct: 8 GALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSSCKTLIEGPLTS 66
Query: 72 RYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTV 131
RYYYLYAE W G V MCV + EF I +++C+ RG+ R GF EYDTG+ +W V
Sbjct: 67 RYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQEYDTGEQSSWMV 126
Query: 132 QLTE 135
QLT+
Sbjct: 127 QLTD 130
>gi|260461475|ref|ZP_05809722.1| protein of unknown function DUF1036 [Mesorhizobium opportunistum
WSM2075]
gi|259032545|gb|EEW33809.1| protein of unknown function DUF1036 [Mesorhizobium opportunistum
WSM2075]
Length = 162
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 85/126 (67%), Gaps = 3/126 (2%)
Query: 13 AMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSR 72
AM+ S A FRVCN T+NL+GV +GY A K GW+TEGWW I G++C+T+++G L SR
Sbjct: 26 AMVMASPAR-ADFRVCNATQNLVGVGIGYRA-KAGWITEGWWHIEGSSCKTLIEGPLSSR 83
Query: 73 YYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQ 132
+YYLYAE W G + MCV + EF I + +C RG+ R GF EYDTG+ +W VQ
Sbjct: 84 FYYLYAEDAERGGRWDGPINMCVAEKEFKIAGVNDCVARGFQRAGFQEYDTGEQASWMVQ 143
Query: 133 LT-EPA 137
LT EPA
Sbjct: 144 LTDEPA 149
>gi|319781082|ref|YP_004140558.1| hypothetical protein Mesci_1348 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166970|gb|ADV10508.1| protein of unknown function DUF1036 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 162
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 84/131 (64%), Gaps = 2/131 (1%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
+ AM+ S A FRVCN T+NL+GV +GY A K GW+TEGWW I G++C+T+
Sbjct: 18 LTLAIGLSAMVVASPAR-ADFRVCNATQNLVGVGIGYRA-KAGWITEGWWHIEGSSCKTL 75
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SR+YYLYAE W G + MCV + EF I + +C RG+ R GF EYDTG
Sbjct: 76 IEGPLSSRFYYLYAEDAERGGRWDGPINMCVAEKEFKIAGVTDCVARGFQRAGFQEYDTG 135
Query: 125 QHENWTVQLTE 135
+ +W VQLT+
Sbjct: 136 EQASWMVQLTD 146
>gi|153008496|ref|YP_001369711.1| hypothetical protein Oant_1164 [Ochrobactrum anthropi ATCC 49188]
gi|151560384|gb|ABS13882.1| protein of unknown function DUF1036 [Ochrobactrum anthropi ATCC
49188]
Length = 153
Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 86/123 (69%), Gaps = 1/123 (0%)
Query: 13 AMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSR 72
A+ S + A FRVCN T+NL+GV++GY A K GW+TEGWW I G++C+T+++G L SR
Sbjct: 17 ALGMTSIEARADFRVCNATQNLVGVSIGYRA-KTGWVTEGWWHIDGSSCKTLIEGPLTSR 75
Query: 73 YYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQ 132
YYYLYAE W G V MCV + EF I +++C+ RG+ R GF EYDTG+ +W VQ
Sbjct: 76 YYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQEYDTGEQSSWMVQ 135
Query: 133 LTE 135
LT+
Sbjct: 136 LTD 138
>gi|239832837|ref|ZP_04681166.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825104|gb|EEQ96672.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 153
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
Query: 13 AMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSR 72
A+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G C+T+++G L SR
Sbjct: 17 ALGMTSIEARADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIEGAACKTLLEGPLSSR 75
Query: 73 YYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQ 132
YYYLYAE W G V MCV + EF I +++C+ RG+ R GF EYDTG+ +W VQ
Sbjct: 76 YYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQEYDTGEQSSWMVQ 135
Query: 133 LTE 135
LT+
Sbjct: 136 LTD 138
>gi|163758854|ref|ZP_02165941.1| hypothetical protein HPDFL43_15562 [Hoeflea phototrophica DFL-43]
gi|162284144|gb|EDQ34428.1| hypothetical protein HPDFL43_15562 [Hoeflea phototrophica DFL-43]
Length = 145
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 93/136 (68%), Gaps = 2/136 (1%)
Query: 4 SFLICFCFGAMIFCS-NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCE 62
+ LI G ++ S + A FRVCNGT++L+G A+GY +G W+TEGWWQIP N+C
Sbjct: 5 AVLIPMVAGILMLASVEDAKADFRVCNGTQSLVGGAIGYRTAEG-WVTEGWWQIPANSCA 63
Query: 63 TVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYD 122
T+++G L SRYYYLYAE WAG + MCV +EF IV +++C+ RG+ RVGF EYD
Sbjct: 64 TLIEGQLQSRYYYLYAEDAGGGGRWAGGINMCVADNEFRIVGVEDCFARGFQRVGFKEYD 123
Query: 123 TGQHENWTVQLTEPAQ 138
TG+ +W VQL++ +
Sbjct: 124 TGRQGSWMVQLSDAPE 139
>gi|307944481|ref|ZP_07659821.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307772230|gb|EFO31451.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 173
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 83/133 (62%), Gaps = 1/133 (0%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVV 65
+ + A++ ++ ++A R+CN T++ +GVA+GY K GW+TEGWW I N+CET+
Sbjct: 36 VTSLTWAALLLGNSTAWADLRLCNKTESKVGVAIGYKD-KAGWVTEGWWNISSNSCETLF 94
Query: 66 KGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQ 125
GAL SRYYY+YA W G MC EF I I++C RGY R GF E DTG+
Sbjct: 95 PGALVSRYYYIYAVDYDQLGEWGGRAFMCTRDKEFTIRGIEDCVARGYERTGFFEIDTGE 154
Query: 126 HENWTVQLTEPAQ 138
+WTVQLTEP Q
Sbjct: 155 QSSWTVQLTEPVQ 167
>gi|254501074|ref|ZP_05113225.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222437145|gb|EEE43824.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 147
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 6/142 (4%)
Query: 2 LRSFLICFCFGAMIFCSNVSFAG-----FRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQI 56
+R+ + FC ++ F N F+G R+CN T + +GVA+GY K W+TEGWW +
Sbjct: 1 MRTSIQTFCALSLAFFLNTIFSGNAHADLRLCNKTDSQVGVAIGYKD-KSDWITEGWWNL 59
Query: 57 PGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRV 116
N+CET+V GAL SRYYY+YA W G MC + EF I I++C RG+ R
Sbjct: 60 ASNSCETLVPGALVSRYYYIYAVDYDQFGEWGGRAFMCTREKEFTIRGIEDCVARGFERT 119
Query: 117 GFTEYDTGQHENWTVQLTEPAQ 138
GF E DTG+ +WTVQLTEP Q
Sbjct: 120 GFFEIDTGEQSSWTVQLTEPVQ 141
>gi|254473166|ref|ZP_05086564.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211957887|gb|EEA93089.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 161
Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 6 LICFCFGAMIFCSNVSF-AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
L C FG + F S A FR CN T++ + +A+GY W+TEGWW I N C+T+
Sbjct: 23 LACVAFGVLSFQQIPSAKADFRACNKTESTVNIAIGYRD-GADWITEGWWTIDKNACDTL 81
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
V G L SRYYYLYA + W G MCV Q +F I I++C RGY R GF E DTG
Sbjct: 82 VSGDLASRYYYLYAVQTDQNGEWDGKAYMCVRQKKFTIRGIEDCVARGYERTGFFEIDTG 141
Query: 125 QHENWTVQLTEPAQ 138
+ +WTVQLTEP +
Sbjct: 142 EQSSWTVQLTEPVE 155
>gi|118588390|ref|ZP_01545799.1| hypothetical protein SIAM614_23952 [Stappia aggregata IAM 12614]
gi|118439096|gb|EAV45728.1| hypothetical protein SIAM614_23952 [Stappia aggregata IAM 12614]
Length = 145
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 82/135 (60%), Gaps = 4/135 (2%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
+FL F A S+ + A R+CN T + +GVA+GY K W+TEGWW + N+CET
Sbjct: 9 AFLAVLFFSA---SSDEARADLRLCNKTDSQVGVAIGYKD-KTDWVTEGWWNLASNSCET 64
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+V GAL SRYYY+YA W G MC + EF I I++C RG+ R GF E DT
Sbjct: 65 LVPGALVSRYYYIYAVDYDQFGEWGGRAFMCTREKEFTIRGIEDCVARGFERTGFFEIDT 124
Query: 124 GQHENWTVQLTEPAQ 138
G+ +WTVQLTEP Q
Sbjct: 125 GEQSSWTVQLTEPVQ 139
>gi|328542484|ref|YP_004302593.1| integral membrane protein [polymorphum gilvum SL003B-26A1]
gi|326412231|gb|ADZ69294.1| Predicted integral membrane protein [Polymorphum gilvum
SL003B-26A1]
Length = 156
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Query: 19 NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYA 78
+ + A R+CN T++ +GVA+GY K W+TEGWW + N+CET+V GAL SRYYY+YA
Sbjct: 32 DPARADLRLCNKTESQVGVAIGYKD-KTDWVTEGWWNLSPNSCETLVPGALVSRYYYIYA 90
Query: 79 EGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
W G MC + EF I I++C RGY R GF E DTG+ NWTVQLTEP Q
Sbjct: 91 VDYDQFGEWGGRAYMCTREKEFTIRGIEDCVARGYERTGFFEIDTGEQSNWTVQLTEPVQ 150
>gi|39937252|ref|NP_949528.1| hypothetical protein RPA4192 [Rhodopseudomonas palustris CGA009]
gi|192293033|ref|YP_001993638.1| hypothetical protein Rpal_4672 [Rhodopseudomonas palustris TIE-1]
gi|39651110|emb|CAE29633.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
gi|192286782|gb|ACF03163.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
TIE-1]
Length = 194
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
+ FG ++ S + A FR+CN T + +G+A+GY V G W TEGWW + +CET
Sbjct: 19 TMTAALAFGVLLSSSVPAAADFRLCNNTSSRVGIALGYKDVDG-WTTEGWWNVSSRSCET 77
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+++GAL +RYYY+YA W+G MC EF I +NC RG+ R GF E DT
Sbjct: 78 LLRGALVARYYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDT 137
Query: 124 GQHENWTVQLTE 135
G+ WTVQLTE
Sbjct: 138 GEQRAWTVQLTE 149
>gi|163852165|ref|YP_001640208.1| hypothetical protein Mext_2746 [Methylobacterium extorquens PA1]
gi|1907335|gb|AAB66497.1| orf4; putative [Methylobacterium extorquens AM1]
gi|163663770|gb|ABY31137.1| protein of unknown function DUF1036 [Methylobacterium extorquens
PA1]
Length = 180
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVV 65
++ C GA + A R+CN T + +GV +GY +G W+TEGWW + CET++
Sbjct: 43 VLGLCLGASALLPLPASADLRLCNQTASKVGVTLGYRDAQG-WVTEGWWDLKPRNCETLL 101
Query: 66 KGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQ 125
KG+L +++YYLYA S W+G MC F I +++C RG+ R GF E DTGQ
Sbjct: 102 KGSLAAQFYYLYAVDYSRGGEWSGRAMMCTRDTAFTIRGVEDCLARGFDRNGFIEVDTGQ 161
Query: 126 HENWTVQLTEPAQ 138
NWT+QL++P Q
Sbjct: 162 QRNWTIQLSDPGQ 174
>gi|218530923|ref|YP_002421739.1| hypothetical protein Mchl_2973 [Methylobacterium chloromethanicum
CM4]
gi|240139497|ref|YP_002963972.1| hypothetical protein MexAM1_META1p2943 [Methylobacterium extorquens
AM1]
gi|254561911|ref|YP_003069006.1| hypothetical protein METDI3512 [Methylobacterium extorquens DM4]
gi|218523226|gb|ACK83811.1| protein of unknown function DUF1036 [Methylobacterium
chloromethanicum CM4]
gi|240009469|gb|ACS40695.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
gi|254269189|emb|CAX25155.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 151
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVV 65
++ C GA + A R+CN T + +GV +GY +G W+TEGWW + CET++
Sbjct: 14 VLGLCLGASALLPLPASADLRLCNQTASKVGVTLGYRDAQG-WVTEGWWDLKPRNCETLL 72
Query: 66 KGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQ 125
KG+L +++YYLYA S W+G MC F I +++C RG+ R GF E DTGQ
Sbjct: 73 KGSLAAQFYYLYAVDYSRGGEWSGRAMMCTRDTAFTIRGVEDCLARGFDRNGFIEVDTGQ 132
Query: 126 HENWTVQLTEPAQ 138
NWT+QL++P Q
Sbjct: 133 QRNWTIQLSDPGQ 145
>gi|316935706|ref|YP_004110688.1| hypothetical protein Rpdx1_4404 [Rhodopseudomonas palustris DX-1]
gi|315603420|gb|ADU45955.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
DX-1]
Length = 198
Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 76/128 (59%), Gaps = 1/128 (0%)
Query: 8 CFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG 67
GA+I + A FR+CN T + +G+A+GY V G W TEGWW + +CET+++G
Sbjct: 27 ALAIGALICGHAPAAADFRLCNNTSSRVGIALGYKDVDG-WTTEGWWNVSSRSCETLLRG 85
Query: 68 ALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHE 127
AL +RYYY+YA W+G MC EF I +NC RG+ R GF E DTG+
Sbjct: 86 ALVARYYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDTGEQR 145
Query: 128 NWTVQLTE 135
WTVQLTE
Sbjct: 146 AWTVQLTE 153
>gi|319404784|emb|CBI78385.1| hypothetical protein BARRO_130029 [Bartonella rochalimae ATCC
BAA-1498]
Length = 192
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 1 MLRSFLICFCFGAMIFCS--NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPG 58
ML+ F + F F + F S + A FRVCN T+ +G+A+GY V W+TEGWW +P
Sbjct: 1 MLKEFRVLF-FNILFFFSAFECAKADFRVCNTTQESVGIAIGYRTV-SNWVTEGWWIVPT 58
Query: 59 NTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGF 118
C+T++ G L SR+YYLY E G V MCV +F I I NC+ RG+ R F
Sbjct: 59 TECKTLIDGPLASRFYYLYFENTRKKGSGVGKVMMCVQDSQFTIEGIHNCFVRGFQRAEF 118
Query: 119 TEYDTGQHENWTVQLTE 135
E DTG NW VQLT+
Sbjct: 119 EEIDTGDQTNWMVQLTD 135
>gi|163869164|ref|YP_001610414.1| hypothetical protein Btr_2431 [Bartonella tribocorum CIP 105476]
gi|161018861|emb|CAK02419.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 175
Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 81/135 (60%), Gaps = 7/135 (5%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
L S L+ F F + A FRVCN T+ +G+A+GY GW++EGWW +P
Sbjct: 30 FLLSILLLFPFSVCVK------ADFRVCNTTQQSVGIALGYRTF-SGWVSEGWWVVPVTE 82
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C+T+++G L SR+YY YAEG +WAG+V MCV +F I + +C+ RGY + F E
Sbjct: 83 CKTLIEGPLASRFYYFYAEGAQKKGNWAGSVTMCVQDSQFTIQGVHDCFPRGYQKAEFQE 142
Query: 121 YDTGQHENWTVQLTE 135
DTG +W VQLT+
Sbjct: 143 IDTGNQTSWMVQLTD 157
>gi|319406271|emb|CBI79908.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3]
Length = 184
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Query: 1 MLRSFLICFCFGAMIFCS-NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN 59
ML+ I F +F + + A FRVCN T+ +G+A+GY V W++EGWW +P
Sbjct: 1 MLKKLRILFLNILFLFSAFEWAKADFRVCNTTQEAVGIAIGYRTV-SNWVSEGWWIVPTT 59
Query: 60 TCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFT 119
C+T++ G L SR+YYLY E G V MCV +F I I NC+ RG+ RV F
Sbjct: 60 ECKTLIDGPLESRFYYLYVENTRKKGSGIGKVMMCVQDSQFTIEGIHNCFVRGFQRVEFE 119
Query: 120 EYDTGQHENWTVQLTE 135
E DTG NW VQLT+
Sbjct: 120 EIDTGDQTNWMVQLTD 135
>gi|240851247|ref|YP_002972650.1| hypothetical protein Bgr_18570 [Bartonella grahamii as4aup]
gi|240268370|gb|ACS51958.1| hypothetical protein Bgr_18570 [Bartonella grahamii as4aup]
Length = 142
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
A FRVCN T+ +GVA+GY G W++EGWW +P C+T+++G L SR+YY YAEG
Sbjct: 13 ADFRVCNTTQQSVGVALGYRTFSG-WVSEGWWTVPVTECKTLIEGPLASRFYYFYAEGAQ 71
Query: 83 HSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
+WAG+V MCV +F I + +C+ RGY + F E DTG +W +QLT+
Sbjct: 72 KKGNWAGSVTMCVQDSQFTIQGVHDCFPRGYQKAEFKEIDTGNQTSWMIQLTD 124
>gi|319899392|ref|YP_004159489.1| hypothetical protein BARCL_1247 [Bartonella clarridgeiae 73]
gi|319403360|emb|CBI76919.1| conserved exported protein of unknown function [Bartonella
clarridgeiae 73]
Length = 200
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Query: 1 MLRSFLICFCFGAMIFCS-NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN 59
ML+ I F ++F + + A FRVCN T+ +G+A+GY V W++EGWW +P
Sbjct: 1 MLKELRILFLNVLILFSAFEYAKADFRVCNTTQESVGIAIGYRTV-SNWVSEGWWIVPTT 59
Query: 60 TCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFT 119
C+T++ G L SR+YYLY E G V MCV +F I I NC+ RG+ + F
Sbjct: 60 ECKTLIDGPLASRFYYLYVENTRKKGSGVGTVMMCVRDSQFTIEGIHNCFVRGFQKAKFE 119
Query: 120 EYDTGQHENWTVQLTE 135
E DTG NW VQLT+
Sbjct: 120 EIDTGDQTNWMVQLTD 135
>gi|49474693|ref|YP_032735.1| hypothetical protein BQ12060 [Bartonella quintana str. Toulouse]
gi|49240197|emb|CAF26665.1| hypothetical protein BQ12060 [Bartonella quintana str. Toulouse]
Length = 177
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 19 NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYA 78
N + A FRVCN T+ +GVA+GY + G W++EGWW +P C+T+++G L SR+YY YA
Sbjct: 42 NFAKADFRVCNTTQRPVGVALGYRTLSG-WVSEGWWTVPVTGCKTLIEGPLSSRFYYFYA 100
Query: 79 EGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
EG W G+V MCV +F I + +C+ RGY + F E DTG +W VQLT+
Sbjct: 101 EGAQKKGSWLGSVTMCVQDSQFTIEGVHDCFPRGYQKAEFQEIDTGNQTSWMVQLTD 157
>gi|86748549|ref|YP_485045.1| hypothetical protein RPB_1424 [Rhodopseudomonas palustris HaA2]
gi|86571577|gb|ABD06134.1| Protein of unknown function DUF1036 [Rhodopseudomonas palustris
HaA2]
Length = 197
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
Query: 13 AMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSR 72
A++ S + A FR+CN T + +G+A+GY G W TEGWW + +CET+++G L +R
Sbjct: 28 ALMLASVPAAADFRLCNNTSSRVGIALGYKDADG-WTTEGWWNVSSRSCETLLRGTLVAR 86
Query: 73 YYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQ 132
YYY+YA W+G MC EF I +NC RG+ R GF E DTG+ WTVQ
Sbjct: 87 YYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDTGEQRAWTVQ 146
Query: 133 LTEPAQ 138
LTE ++
Sbjct: 147 LTESSE 152
>gi|75675180|ref|YP_317601.1| hypothetical protein Nwi_0987 [Nitrobacter winogradskyi Nb-255]
gi|74420050|gb|ABA04249.1| Protein of unknown function DUF1036 [Nitrobacter winogradskyi
Nb-255]
Length = 194
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 10 CFGAMIFC--SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG 67
G ++ C S + A FR+CN T + +G+A+GY + G W TEGWW I + CET+++G
Sbjct: 24 ALGLVVVCLWSAPAAADFRLCNNTSSRVGIALGYKSADG-WTTEGWWNISSHACETLLRG 82
Query: 68 ALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHE 127
L +RYYY+YA H W+G MC EF I +NC RG+ R GF E DTG
Sbjct: 83 TLIARYYYIYALDYDHGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEIDTGDQR 142
Query: 128 NWTVQLTEPAQ 138
WTVQLTE +
Sbjct: 143 AWTVQLTESGE 153
>gi|49476170|ref|YP_034211.1| hypothetical protein BH15130 [Bartonella henselae str. Houston-1]
gi|49238978|emb|CAF28276.1| hypothetical protein BH15130 [Bartonella henselae str. Houston-1]
Length = 177
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
A FRVCN T+ +GVA+GY G W++EGWW +P C+T+++G L SR+YY YAEG
Sbjct: 46 ADFRVCNTTQQPVGVALGYRTFSG-WVSEGWWVVPVTECKTLIEGPLSSRFYYFYAEGAE 104
Query: 83 HSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
W G+V MCV +F I + +C+ RGY + F E DTG +W VQLT+
Sbjct: 105 KKNSWPGSVTMCVQDSQFTIQGVHDCFPRGYQKAEFKEIDTGNQTSWMVQLTD 157
>gi|300024149|ref|YP_003756760.1| hypothetical protein Hden_2643 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525970|gb|ADJ24439.1| protein of unknown function DUF1036 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 148
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 77/123 (62%), Gaps = 1/123 (0%)
Query: 18 SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLY 77
+NV+ A ++CN T + +GVA+GY K GW TEGWW I TCET++KGAL SRY Y++
Sbjct: 24 ANVAHADLKLCNITSSRVGVAIGYQD-KTGWATEGWWNIASQTCETLLKGALPSRYVYVH 82
Query: 78 AEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPA 137
A W G MC + F I +++C RGY R GF E DTG+ + WT++LT+P
Sbjct: 83 AVDYDRGGEWGGKNDMCTNEKSFAIRGVQDCEKRGYKRTGFFEVDTGEAKEWTIRLTDPG 142
Query: 138 QDR 140
Q +
Sbjct: 143 QGK 145
>gi|146338282|ref|YP_001203330.1| putative signal peptide [Bradyrhizobium sp. ORS278]
gi|146191088|emb|CAL75093.1| conserved hypothetical protein; putative signal peptide
[Bradyrhizobium sp. ORS278]
Length = 197
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Query: 16 FCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYY 75
S+ + A FR+CN T + +G+A+GY +G W TEGWW + +CET++KG L +RYYY
Sbjct: 31 LSSSPAAADFRLCNNTSSRVGIALGYKDAEG-WTTEGWWNVSSRSCETLLKGTLVARYYY 89
Query: 76 LYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
+YA W+G MC EF I NC RG+ R GF E DTG WTVQLTE
Sbjct: 90 IYALDYDRGGEWSGQAFMCSRDKEFTIKGTDNCLARGFDRTGFFEVDTGDQRAWTVQLTE 149
Query: 136 ----PAQDR 140
PAQ R
Sbjct: 150 ANEQPAQQR 158
>gi|148258076|ref|YP_001242661.1| hypothetical protein BBta_6868 [Bradyrhizobium sp. BTAi1]
gi|146410249|gb|ABQ38755.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 195
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Query: 18 SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLY 77
S + A FR+CN T + +G+A+GY +G W TEGWW + +CET++KG L +RYYY+Y
Sbjct: 33 STPAAADFRLCNNTSSRVGIALGYKDAEG-WTTEGWWNVSSRSCETLLKGTLVARYYYIY 91
Query: 78 AEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE-- 135
A W+G MC EF I +NC RG+ R GF E DTG WTVQLTE
Sbjct: 92 ALDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDTGDQRAWTVQLTEAN 151
Query: 136 --PAQDR 140
PAQ R
Sbjct: 152 EQPAQQR 158
>gi|92116778|ref|YP_576507.1| hypothetical protein Nham_1219 [Nitrobacter hamburgensis X14]
gi|91799672|gb|ABE62047.1| protein of unknown function DUF1036 [Nitrobacter hamburgensis X14]
Length = 194
Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 10 CFGAMIFC--SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG 67
G ++ C S + A FR+CN T +G+A+GY +G W TEGWW + CET+++G
Sbjct: 24 ALGILVVCLWSAPAAADFRLCNNTPGRVGIALGYKDAEG-WTTEGWWNVSSRACETLLRG 82
Query: 68 ALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHE 127
L +RYYY+YA H W+G MC EF I NC RG+ R GF E DTG
Sbjct: 83 TLIARYYYIYALDYDHGGEWSGQAFMCSRDKEFTIRGTDNCLARGFDRTGFFEIDTGDQR 142
Query: 128 NWTVQLTE 135
WTVQLTE
Sbjct: 143 AWTVQLTE 150
>gi|304393438|ref|ZP_07375366.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303294445|gb|EFL88817.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 159
Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 75/118 (63%), Gaps = 2/118 (1%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
A VCN T+NL+GV+VGY K W +EGWW+IP C V+KG+L++RY+YL+AE
Sbjct: 27 ADLSVCNTTENLVGVSVGYRD-KEMWKSEGWWRIPAGDCAAVIKGSLNARYFYLHAEDSV 85
Query: 83 HSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQDR 140
W G V MC EFNI ++NC+ RG+ R GF E DTG+ NW V+L P Q R
Sbjct: 86 TGGQWRGPVFMCTSSKEFNIEGLENCFARGHERTGFFEIDTGKQTNWQVRLN-PGQAR 142
>gi|170746577|ref|YP_001752837.1| hypothetical protein Mrad2831_0127 [Methylobacterium radiotolerans
JCM 2831]
gi|170653099|gb|ACB22154.1| protein of unknown function DUF1036 [Methylobacterium radiotolerans
JCM 2831]
Length = 160
Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 80/126 (63%), Gaps = 1/126 (0%)
Query: 11 FGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALH 70
G + ++ + A R+CN T + +G+++GY +G W+TEGWW + CET++KGAL
Sbjct: 27 LGLALLGASPARADLRLCNQTASKVGISLGYRDPQG-WVTEGWWDLAPKACETLLKGALA 85
Query: 71 SRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWT 130
+R+YY++A + W+G MC EF I I++C RGY R GF E DTG+ ++WT
Sbjct: 86 ARFYYVFAVDYTRGGEWSGRSLMCTRDSEFTIRGIEDCLARGYDRNGFFEVDTGEQKSWT 145
Query: 131 VQLTEP 136
+QLT+P
Sbjct: 146 IQLTDP 151
>gi|85716082|ref|ZP_01047058.1| hypothetical protein NB311A_10900 [Nitrobacter sp. Nb-311A]
gi|85697081|gb|EAQ34963.1| hypothetical protein NB311A_10900 [Nitrobacter sp. Nb-311A]
Length = 175
Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Query: 10 CFGAMIFC--SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG 67
G ++ C S + A FR+CN T + +G+A+GY G W TEGWW + + CET+++G
Sbjct: 4 ALGILVVCLWSAPAAADFRLCNNTSSRVGIALGYKDADG-WTTEGWWNVSSHACETLLRG 62
Query: 68 ALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHE 127
L +RYYY+YA H W+G MC EF I NC RG+ R GF E DTG
Sbjct: 63 TLIARYYYIYALDYDHGGEWSGQAFMCSRDKEFTIKGTDNCLARGFDRTGFFEIDTGDQR 122
Query: 128 NWTVQLTE 135
WTVQLTE
Sbjct: 123 AWTVQLTE 130
>gi|220925791|ref|YP_002501093.1| hypothetical protein Mnod_5963 [Methylobacterium nodulans ORS 2060]
gi|219950398|gb|ACL60790.1| protein of unknown function DUF1036 [Methylobacterium nodulans ORS
2060]
Length = 151
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
Query: 26 RVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSE 85
R+CN T + IGVA+GY GGW+TEGWW + CET++KGAL +RYYY++A
Sbjct: 35 RMCNMTGSRIGVALGYRDA-GGWVTEGWWNLSARACETLLKGALAARYYYVFAVDYDRGG 93
Query: 86 HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
W+G MC EF I +++C RGY R GF E DTG+ ++WT+QLT+P +
Sbjct: 94 EWSGRSLMCTRDREFTIRGVEDCLARGYDRNGFFEVDTGEQKSWTIQLTDPGR 146
>gi|209884227|ref|YP_002288084.1| hypothetical protein OCAR_5084 [Oligotropha carboxidovorans OM5]
gi|209872423|gb|ACI92219.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 187
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 21 SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEG 80
+ A FR+CN T + +G+A+GY +G W+TEGWW I + CET++KG L +RYYY+Y
Sbjct: 30 AHADFRLCNNTSSRVGIALGYKDAEG-WVTEGWWNISSHACETLLKGTLVARYYYIYGLD 88
Query: 81 VSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
W+G MC EF I NC RGY R GF E DTG+ +WTVQLTE +
Sbjct: 89 YDRGGEWSGQAFMCSRDKEFTIKGTDNCLARGYDRTGFYEVDTGEQRSWTVQLTEAGE 146
>gi|158422068|ref|YP_001523360.1| hypothetical protein AZC_0444 [Azorhizobium caulinodans ORS 571]
gi|158328957|dbj|BAF86442.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 194
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
+ + + A FR+CN T++ +GVA+GY + W TEGWW I N+CET+++G L +R+Y
Sbjct: 49 VVLPDPAAADFRLCNRTQSRVGVAIGYKEGEN-WATEGWWNIAANSCETLLRGDLVARFY 107
Query: 75 YLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
YLYA W+G MC EF I +++C RG+ R GF E DT + + WTVQLT
Sbjct: 108 YLYAVDYDQGGEWSGKAFMCTRDKEFTIRGVEDCLARGFDRTGFLEVDTKEQKGWTVQLT 167
Query: 135 EPAQ 138
E Q
Sbjct: 168 ESNQ 171
>gi|299132067|ref|ZP_07025262.1| protein of unknown function DUF1036 [Afipia sp. 1NLS2]
gi|298592204|gb|EFI52404.1| protein of unknown function DUF1036 [Afipia sp. 1NLS2]
Length = 191
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 18 SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLY 77
S + A FR+CN T + +G+A+GY +G W+TEGWW I + CET++KG L +RYYY+Y
Sbjct: 32 STPARADFRLCNNTSSRVGIALGYKDSEG-WVTEGWWNISSHACETLLKGTLVARYYYIY 90
Query: 78 AEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
W+G MC EF I +NC RG+ R GF E DTG+ +WTVQLTE
Sbjct: 91 GLDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFYEVDTGEQRSWTVQLTE 148
>gi|154246007|ref|YP_001416965.1| hypothetical protein Xaut_2064 [Xanthobacter autotrophicus Py2]
gi|154160092|gb|ABS67308.1| protein of unknown function DUF1036 [Xanthobacter autotrophicus
Py2]
Length = 182
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 73/118 (61%), Gaps = 5/118 (4%)
Query: 25 FRVCNGTKNLIGVAVGYPAVKGG--WMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
FR+CN T++ IG+A+GY K G W TEGWW + N+CET+++G L +R+YYLYA
Sbjct: 51 FRLCNRTQSRIGIALGY---KDGDIWTTEGWWNVSANSCETLLRGELSARFYYLYAVDYD 107
Query: 83 HSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQDR 140
WAG MC + EF I +C RG+ R GF E DT + + WTVQLTE Q +
Sbjct: 108 QGGEWAGKAYMCTREKEFTIKAADDCLARGFDRTGFFEVDTKEQKAWTVQLTESNQTK 165
>gi|90425456|ref|YP_533826.1| hypothetical protein RPC_3981 [Rhodopseudomonas palustris BisB18]
gi|90107470|gb|ABD89507.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
BisB18]
Length = 197
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
+ + + + + A FR+CN T + +G+A+GY +G W TEGWW + +CET
Sbjct: 19 ALMPAWALAVLCLSFTPAAADFRLCNNTASRVGIALGYKDAEG-WTTEGWWNVSSRSCET 77
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+++G L +R+YY+YA W+G MC EF I NC RG+ R GF E DT
Sbjct: 78 LLRGTLVARFYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTDNCLARGFDRTGFFEVDT 137
Query: 124 GQHENWTVQLTEPAQ 138
G+ WTVQLTE ++
Sbjct: 138 GEQRAWTVQLTESSE 152
>gi|23010468|ref|ZP_00051146.1| COG5480: Predicted integral membrane protein [Magnetospirillum
magnetotacticum MS-1]
Length = 158
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
Query: 13 AMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSR 72
A+ + A R+CN T + +GV +GY +G W+TEGWW + CET+++G+L ++
Sbjct: 28 ALTLLPFPALADLRLCNQTASKVGVTLGYRDAQG-WVTEGWWDLKPRNCETLLRGSLAAQ 86
Query: 73 YYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQ 132
+YY+YA + W+G MC F I +++C RG+ R GF E DTGQ NWT+Q
Sbjct: 87 FYYVYAVDYTRGGEWSGRAMMCTRDTAFTIRGVEDCLARGFDRNGFIEVDTGQQRNWTIQ 146
Query: 133 LTEPAQ 138
L++P Q
Sbjct: 147 LSDPGQ 152
>gi|91975882|ref|YP_568541.1| hypothetical protein RPD_1403 [Rhodopseudomonas palustris BisB5]
gi|91682338|gb|ABE38640.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
BisB5]
Length = 196
Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 25 FRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHS 84
FR+CN T + +G+A+GY V G W TEGWW + +CET+++G L +RYYY+YA
Sbjct: 40 FRLCNNTSSRVGIALGYKDVDG-WTTEGWWNVASRSCETLLRGTLVARYYYIYALDYDRG 98
Query: 85 EHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
W+G MC EF I +NC RG+ R GF E DTG+ WTVQLTE
Sbjct: 99 GEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDTGEQRAWTVQLTE 149
>gi|170743310|ref|YP_001771965.1| hypothetical protein M446_5206 [Methylobacterium sp. 4-46]
gi|168197584|gb|ACA19531.1| protein of unknown function DUF1036 [Methylobacterium sp. 4-46]
Length = 116
Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
Query: 27 VCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEH 86
+CN T + +GVA+GY GGW+TEGWW + G CET++KGAL +RYYY++A
Sbjct: 1 MCNMTGSRVGVALGYRDA-GGWVTEGWWNLSGKACETLLKGALAARYYYVFAVDYDRGGE 59
Query: 87 WAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
W+G MC EF I +++C RG+ R GF E DTG+ ++WT+QLT+P +
Sbjct: 60 WSGRSLMCTRDREFTIRGVEDCLARGFDRNGFFEVDTGEQKSWTIQLTDPGR 111
>gi|115526104|ref|YP_783015.1| hypothetical protein RPE_4109 [Rhodopseudomonas palustris BisA53]
gi|115520051|gb|ABJ08035.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
BisA53]
Length = 196
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Query: 19 NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYA 78
+ + A FR+CN T + +G+A+GY G W TEGWW + +CET+++G L +R+YY+YA
Sbjct: 34 SAAAADFRLCNNTSSRVGIALGYKDADG-WTTEGWWNVSSRSCETLLRGTLVARFYYIYA 92
Query: 79 EGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
W+G MC EF I NC RG+ R GF E DTG+ WTVQLTE ++
Sbjct: 93 LDYDRGGEWSGQAFMCSRDKEFTIKGTDNCLARGFDRTGFFEVDTGEQRAWTVQLTESSE 152
>gi|298293062|ref|YP_003695001.1| hypothetical protein Snov_3107 [Starkeya novella DSM 506]
gi|296929573|gb|ADH90382.1| protein of unknown function DUF1036 [Starkeya novella DSM 506]
Length = 178
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
A FR+CN + + +G+A+GY W TEGWW I N+CET+++G L +RYYY+YA
Sbjct: 44 ADFRLCNRSTSRVGIALGYKD-GNSWSTEGWWNIGANSCETLLRGDLVARYYYVYAIDYD 102
Query: 83 HSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
WAG MC + EF I I++C RGY R GF E DT + ++WTVQLTE Q
Sbjct: 103 LGGEWAGKAFMCTREKEFTIRGIEDCLARGYDRTGFFEVDTHEQKSWTVQLTEQKQ 158
>gi|188582113|ref|YP_001925558.1| hypothetical protein Mpop_2868 [Methylobacterium populi BJ001]
gi|179345611|gb|ACB81023.1| protein of unknown function DUF1036 [Methylobacterium populi BJ001]
Length = 163
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Query: 26 RVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSE 85
R+CN T + +GV +GY +G W+TEGWW + +CET+++G+L +++YY+YA +
Sbjct: 46 RLCNQTASKVGVTLGYRDAQG-WVTEGWWDLKPRSCETLLRGSLAAQFYYVYAVDYTRGG 104
Query: 86 HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
W+G MC F I +++C RG+ R GF E DTGQ NWT+QL++P Q
Sbjct: 105 EWSGRAMMCTRDTAFTIRGVEDCLARGFDRNGFIEVDTGQQRNWTIQLSDPGQ 157
>gi|296445889|ref|ZP_06887840.1| protein of unknown function DUF1036 [Methylosinus trichosporium
OB3b]
gi|296256557|gb|EFH03633.1| protein of unknown function DUF1036 [Methylosinus trichosporium
OB3b]
Length = 165
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
M + F + + + A FR+CN T N + VA+ Y +G W++EGWW + +
Sbjct: 25 MTKRFAPTVIVSFWLCATTAAEADFRMCNNTSNRVSVALAYTDGRG-WLSEGWWNLRASD 83
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
CET+++G L ++YYY+YA E W G MC EF I ++C+ RG+ R GF E
Sbjct: 84 CETLLRGPLAAQYYYIYAMDERGGE-WKGKAFMCTRDREFRIDGREDCFARGFDRTGFFE 142
Query: 121 YDTGQH-ENWTVQLTEP 136
DTG+ +NWTVQLT+P
Sbjct: 143 IDTGRDAKNWTVQLTDP 159
>gi|27382248|ref|NP_773777.1| hypothetical protein blr7137 [Bradyrhizobium japonicum USDA 110]
gi|27355419|dbj|BAC52402.1| blr7137 [Bradyrhizobium japonicum USDA 110]
Length = 199
Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 5/144 (3%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+L + + ++ + A FR+CN T + +G+A+GY +G W TEGWW I +
Sbjct: 12 LLARLVPVLAIAVLCLWTSPASADFRLCNNTSSRVGIALGYKDAEG-WTTEGWWNISSRS 70
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
CET+++G L +RYYY+YA W+G MC EF I ++C RGY R G+ E
Sbjct: 71 CETLLRGTLVARYYYIYAIDYDRGGEWSGQAFMCSRDKEFTIRGTEDCLARGYDRTGYFE 130
Query: 121 YDTGQHENWTVQLTE----PAQDR 140
DTG+ WTVQLT+ PAQ R
Sbjct: 131 VDTGEQRAWTVQLTDANEQPAQPR 154
>gi|312113396|ref|YP_004010992.1| hypothetical protein Rvan_0615 [Rhodomicrobium vannielii ATCC
17100]
gi|311218525|gb|ADP69893.1| protein of unknown function DUF1036 [Rhodomicrobium vannielii ATCC
17100]
Length = 181
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Query: 9 FCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGA 68
FC G + + A ++CN T + IGVA+GY K GW++EGWW + +C +++
Sbjct: 22 FCLGLALPAP--ANAELKLCNSTASRIGVAIGYKD-KDGWVSEGWWNVDSQSCALLIQDK 78
Query: 69 LHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHEN 128
L +R+YY+YA W G + MC EF I I NC RG+ + GF E DT + +
Sbjct: 79 LRARFYYVYAFDYDKGGEWGGAIAMCTNDVEFTIKGIDNCDGRGFKKSGFFEVDTQEQTD 138
Query: 129 WTVQLTEPAQ 138
WTV+LT+ ++
Sbjct: 139 WTVKLTDQSE 148
>gi|323136222|ref|ZP_08071304.1| protein of unknown function DUF1036 [Methylocystis sp. ATCC 49242]
gi|322398296|gb|EFY00816.1| protein of unknown function DUF1036 [Methylocystis sp. ATCC 49242]
Length = 140
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
A FR+CN T + VA+ Y K W++EGWW + CET+++G L ++YYY+YA
Sbjct: 22 ADFRLCNNTTTRVSVAIAYTDGKN-WLSEGWWNLRPTACETLLRGPLAAQYYYVYAMDER 80
Query: 83 HSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQH-ENWTVQLTEP 136
E W G MC EF I ++C+ RGY R GF E DTG+ ++WTVQLT+P
Sbjct: 81 GGE-WKGKAFMCTRDREFRIDGREDCFARGYERTGFFEIDTGRDAKSWTVQLTDP 134
>gi|319409347|emb|CBI82991.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 128
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 31 TKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGN 90
T+ +G+A+GY + W++EGWW IP C++++ G L SR+YYLYAE W G+
Sbjct: 2 TQKTVGIALGYRTLSD-WVSEGWWVIPPTVCKSLIDGPLSSRFYYLYAEDAQKKGSWVGS 60
Query: 91 VQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
+ MCV +F I + +C+ RG+ + F E DTG +W VQLT+
Sbjct: 61 ITMCVKDSKFVIEGVHDCFARGFQKATFEEIDTGNQTSWMVQLTD 105
>gi|218463506|ref|ZP_03503597.1| hypothetical protein RetlK5_30563 [Rhizobium etli Kim 5]
Length = 99
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 55 QIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYL 114
++P TC T+++G L SRYYYLYAE + W G+VQMCV ++EF I +++CY RGY
Sbjct: 10 KVPATTCATLIEGELQSRYYYLYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQ 69
Query: 115 RVGFTEYDTGQHENWTVQLTE 135
++GF EYDTG+ +W VQL++
Sbjct: 70 KMGFKEYDTGRQGSWMVQLSD 90
>gi|217979800|ref|YP_002363947.1| protein of unknown function DUF1036 [Methylocella silvestris BL2]
gi|217505176|gb|ACK52585.1| protein of unknown function DUF1036 [Methylocella silvestris BL2]
Length = 143
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 5/132 (3%)
Query: 11 FGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGG-WMTEGWWQIPGNTCETVVKGAL 69
G + + + A FR+CN T + +++ Y G W++EGWW + CET+V+G L
Sbjct: 12 LGLFLASALPASADFRLCNNTASRTSISLAY--TDGEIWVSEGWWNLKPGACETLVRGPL 69
Query: 70 HSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQH-EN 128
+ +YY+YA E W G MC EF I+ ++CY RG+ R GF E DTG+ +N
Sbjct: 70 AAEFYYVYAMDERGGE-WKGKAFMCTRDREFRILGREDCYVRGFDRTGFFEVDTGKEAKN 128
Query: 129 WTVQLTEPAQDR 140
WTVQLT+PA +
Sbjct: 129 WTVQLTDPAPQK 140
>gi|182680136|ref|YP_001834282.1| hypothetical protein Bind_3233 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636019|gb|ACB96793.1| protein of unknown function DUF1036 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 146
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
F + G ++ C + A FR+CN T + + V++ Y + W++EGWW + + CET+
Sbjct: 9 FGLLLACGLVLTCQEPARADFRLCNNTDSRVSVSLAYTDGET-WVSEGWWNLKPSGCETL 67
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
V+G L + +YY+YA E W G MC EF I ++C+ RG+ R GF E DTG
Sbjct: 68 VRGPLAAEFYYVYAMDERGGE-WKGKAFMCTRDREFRINGRQDCFVRGFDRTGFFEVDTG 126
Query: 125 QH-ENWTVQLTEPAQDR 140
+ +NWTVQLT+ + R
Sbjct: 127 KEAKNWTVQLTDTSAGR 143
>gi|121601910|ref|YP_988472.1| hypothetical protein BARBAKC583_0134 [Bartonella bacilliformis
KC583]
gi|120614087|gb|ABM44688.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 121
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 35 IGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMC 94
+GVA+GY A GW++EGWW +P C+T++ G L SR+YY++AE W G V MC
Sbjct: 1 MGVALGYRA-PSGWVSEGWWVVPTAECKTLIDGQLISRFYYMHAEDAERKNGWNGPVTMC 59
Query: 95 VGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
V F I + +C+ RG+ + F E DTG NWTVQLTE
Sbjct: 60 VKDSSFLIEGVHDCFARGFQKAYFEEIDTGNQINWTVQLTE 100
>gi|260762501|ref|ZP_05874838.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260672927|gb|EEX59748.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
Length = 100
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 GAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++C+T+++G L S
Sbjct: 16 GALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSSCKTLIEGPLTS 74
Query: 72 RYYYLYAEGVSHSEHWAGNVQMCVGQ 97
RYYYLYAE W G V MCV +
Sbjct: 75 RYYYLYAEDAQGGGRWEGKVNMCVAE 100
>gi|254698062|ref|ZP_05159890.1| hypothetical protein Babob28_10233 [Brucella abortus bv. 2 str.
86/8/59]
Length = 92
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 12 GAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++C+T+++G L S
Sbjct: 8 GALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSSCKTLIEGPLTS 66
Query: 72 RYYYLYAEGVSHSEHWAGNVQMCVGQ 97
RYYYLYAE W G V MCV +
Sbjct: 67 RYYYLYAEDAQGGGRWEGKVNMCVAE 92
>gi|126732841|ref|ZP_01748634.1| hypothetical protein SSE37_03040 [Sagittula stellata E-37]
gi|126706680|gb|EBA05753.1| hypothetical protein SSE37_03040 [Sagittula stellata E-37]
Length = 138
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Query: 1 MLRSFLICFCFG-AMIFCSNVSFAG-FRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPG 58
ML + L F G A+IF S+ A F VCN T N++ VAVG A + + T GWW +
Sbjct: 1 MLPALLRLFSAGCAVIFLSSTQAAAQFAVCNQTLNVLNVAVGRYAYEN-FTTSGWWTVGP 59
Query: 59 NTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGF 118
N C V+ L RY Y++A+ V E G MC+ F+IV ++C RGYL F
Sbjct: 60 NRCANVIDRVLDVRYVYVFAQDVFGKEIMRGATPMCIDTKRFDIVGEEDCLLRGYLEARF 119
Query: 119 TEYDTGQHENWTVQLTEPA 137
E DT + E WT+ + P+
Sbjct: 120 HEVDTFKSERWTLFIYPPS 138
>gi|259417759|ref|ZP_05741678.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259346665|gb|EEW58479.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 128
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 14 MIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRY 73
M+ C + + A F +CN T N ++GY + W++EGWW + + C V G L +RY
Sbjct: 10 MVLCGSAALADFEICNETSNEAFASIGYKDGED-WVSEGWWTLQPDECAIAVVGDLKNRY 68
Query: 74 YYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQL 133
YY+ AE S + +W G+ C D + I +NC +RGY GF E DTG +WT L
Sbjct: 69 YYVRAE--SKTGNWTGDYSFCYINDPYTIRGDENCTSRGYKTGGFFEVDTGNSLDWTQNL 126
Query: 134 TE 135
T+
Sbjct: 127 TD 128
>gi|99082721|ref|YP_614875.1| hypothetical protein TM1040_2881 [Ruegeria sp. TM1040]
gi|99039001|gb|ABF65613.1| protein of unknown function DUF1036 [Ruegeria sp. TM1040]
Length = 128
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 14 MIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRY 73
M+ C + + A F +CN T N ++GY + W++EGWW + C + G L +RY
Sbjct: 10 MVVCGSAALADFEICNETGNEAFASIGYKDGEE-WVSEGWWTLQPGECAIPIVGDLKNRY 68
Query: 74 YYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQL 133
YY+ AE S + +W G+ C D F I +NC RGY GF E DTG +WT L
Sbjct: 69 YYIRAE--SKTGNWTGDYSFCYINDVFTIRGDENCTARGYKTGGFFEVDTGNSLDWTQNL 126
Query: 134 TE 135
T+
Sbjct: 127 TD 128
>gi|13472162|ref|NP_103729.1| hypothetical protein mlr2364 [Mesorhizobium loti MAFF303099]
gi|14022907|dbj|BAB49515.1| mlr2364 [Mesorhizobium loti MAFF303099]
Length = 166
Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 14 MIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRY 73
+IF + + A F VCN T +++ +AVG V T+GWW I N C V++ L +RY
Sbjct: 43 VIFSTKSAHAEFTVCNQTLDVVNLAVGQK-VDNADQTDGWWTIGANQCVNVIREELANRY 101
Query: 74 YYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQL 133
YLYA V G+ +MCV + F+I I+ C+ RG++ F E DT + WT L
Sbjct: 102 IYLYATDVFGHAILNGSTEMCVDRRRFSIRGIEECWQRGHIAARFVEVDTLEQVRWTYFL 161
Query: 134 T 134
T
Sbjct: 162 T 162
>gi|118588939|ref|ZP_01546346.1| hypothetical protein SIAM614_12843 [Stappia aggregata IAM 12614]
gi|118438268|gb|EAV44902.1| hypothetical protein SIAM614_12843 [Stappia aggregata IAM 12614]
Length = 152
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 21 SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLY-AE 79
+ AG RVCNG+ +L+ VA+GY +G TEGWW I N C V++ L YYL+ A+
Sbjct: 38 AHAGLRVCNGSVDLVNVALGYETDEG-LRTEGWWTITANACSQVLQEPLKKARYYLHVAD 96
Query: 80 GVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
G S G++ +C+ +++F + D C+ RG + F + +T ++WTV L+
Sbjct: 97 GFGES-RLGGDITLCIREEKFVLYDGDQCWQRGLIEADFFQVETEGKQDWTVLLS 150
>gi|319778083|ref|YP_004134513.1| hypothetical protein Mesci_6363 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317171802|gb|ADV15339.1| protein of unknown function DUF1036 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 131
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
+ S+ + A F VCN T +++ +AVG V T+GWW I N C V++ L +RY
Sbjct: 9 VLSSSEARAEFTVCNQTLDVVNLAVGQK-VDNADQTDGWWTIGANQCVNVIREELTNRYI 67
Query: 75 YLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
Y+YA V G+ +MC+ + F+I I C+ RG++ F E DT + WT LT
Sbjct: 68 YIYATDVFGHAILTGSTEMCLERRRFSIRGIDECWQRGHIAAQFLEVDTLEQARWTFFLT 127
>gi|81300396|ref|YP_400604.1| integral membrane protein-like [Synechococcus elongatus PCC 7942]
gi|22002502|gb|AAM82654.1| unknown [Synechococcus elongatus PCC 7942]
gi|81169277|gb|ABB57617.1| integral membrane protein-like [Synechococcus elongatus PCC 7942]
Length = 146
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
A +CN T+ + +AVGY + W + GW+ I CETVV G L RYYY YAE
Sbjct: 34 AELVICNKTRKTVNLAVGYKEGES-WRSRGWYSISPRGCETVVGGRLKLRYYYYYAENTD 92
Query: 83 HSEHWAGNVQMCV-GQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
S W G+ C+ +EF+I+ +NC RGYL GF+E DT +++T+ LT+
Sbjct: 93 ASLLWEGDYNFCIRDPEEFSILGDQNCERRGYLTQGFSEIDTKNAKSFTLDLTD 146
>gi|56750053|ref|YP_170754.1| hypothetical protein syc0044_c [Synechococcus elongatus PCC 6301]
gi|56685012|dbj|BAD78234.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 110
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 27 VCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEH 86
+CN T+ + +AVGY + W + GW+ I CETVV G L RYYY YAE S
Sbjct: 2 ICNKTRKTVNLAVGYKEGES-WRSRGWYSISPRGCETVVGGRLKLRYYYYYAENTDASLL 60
Query: 87 WAGNVQMCV-GQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
W G+ C+ +EF+I+ +NC RGYL GF+E DT +++T+ LT+
Sbjct: 61 WEGDYNFCIRDPEEFSILGDQNCERRGYLTQGFSEIDTKNAKSFTLDLTD 110
>gi|84685786|ref|ZP_01013682.1| hypothetical protein 1099457000261_RB2654_13745 [Maritimibacter
alkaliphilus HTCC2654]
gi|84665879|gb|EAQ12353.1| hypothetical protein RB2654_13745 [Rhodobacterales bacterium
HTCC2654]
Length = 354
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 9 FCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG- 67
F F C +FA CN T ++ VA+GY W++EGWW + C TV+ G
Sbjct: 5 FLFVLFSLCPAAAFADVEFCNSTDAVVSVAIGYKG-DADWVSEGWWNVDPGDCRTVLPGN 63
Query: 68 ALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHE 127
S YYY G EH C D F IV NC +RGY R GF E
Sbjct: 64 TPKSHYYYRVESGAYAFEHE--TYMFCTSDDVFTIVGDTNCESRGYDREGFNEIAMEGRP 121
Query: 128 NWTVQLT 134
+T+ +T
Sbjct: 122 GFTIDIT 128
>gi|84685787|ref|ZP_01013683.1| hypothetical protein 1099457000261_RB2654_13750 [Maritimibacter
alkaliphilus HTCC2654]
gi|84665880|gb|EAQ12354.1| hypothetical protein RB2654_13750 [Rhodobacterales bacterium
HTCC2654]
Length = 340
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
AG CN T + VA+GY + G WM+EGWW I C+TV+ L +YY AE S
Sbjct: 4 AGLEFCNQTGSSASVAIGYKSADG-WMSEGWWNIDTGACKTVISRDLDKTHYYWRAE--S 60
Query: 83 HSEHWA-GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQDRR 141
W+ N C + F I+ ++C RGY R GF E T +T+ LT R
Sbjct: 61 RDLSWSHANFMFCTSDEVFTILGDEDCTARGYDREGFNEIKTEGFTTFTMNLTHTGDGRE 120
>gi|259415791|ref|ZP_05739711.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259347230|gb|EEW59007.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 335
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 20 VSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAE 79
V+ A +CN T + VA+GY + W++EGWWQ+P C VV G L R+YYL E
Sbjct: 21 VAQAALDLCNDTSDPQNVAIGYKSADS-WVSEGWWQVPVGECAEVVPGVLPRRFYYLRVE 79
Query: 80 GVSHSEHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQH 126
+E W + CV D+F+I +C RG+ F DTG
Sbjct: 80 ----TEGWVFTDDKLGFCVDDDDFSISGDDSCARRGFRHENFARIDTGPE 125
>gi|126724872|ref|ZP_01740715.1| hypothetical protein RB2150_13591 [Rhodobacterales bacterium
HTCC2150]
gi|126706036|gb|EBA05126.1| hypothetical protein RB2150_13591 [Rhodobacterales bacterium
HTCC2150]
Length = 285
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
AG +CN T ++ G+++GY GGW +EGWW I C T + G L+ + YY AE ++
Sbjct: 54 AGLEICNTTGDVQGISIGYKG-DGGWTSEGWWLIEPTKCATPIGGDLNQQTYYYRAE-IN 111
Query: 83 HSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQ-HENWTVQLT 134
G+ C + IV NC RGY R F +D G+ +N+T+ LT
Sbjct: 112 GGPFEGGSYYFCTDTAAYTIVGDTNCKDRGYDRESFQPFDVGEGTKNYTLTLT 164
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSH 83
G R CN TK+ V++GY + W +EGWW + C V++G L YYY AE V+
Sbjct: 176 GLRFCNETKDSQSVSIGYEGDEA-WTSEGWWVMEPGKCSMVIRGELKDTYYYR-AE-VNG 232
Query: 84 SEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHE 127
+ C E+ I+ K+C RGY R F DT + +
Sbjct: 233 GDFDGEAYYFCTTPTEYTILGDKDCKGRGYDRESFRLIDTSKAD 276
>gi|259417891|ref|ZP_05741810.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259346797|gb|EEW58611.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 137
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 19 NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYA 78
N A F CN T ++ VA+ G + + GWW + N C V+ +L SR+ Y++A
Sbjct: 19 NAGQAKFTFCNQTLDVANVAIS-AFNDGAFESSGWWVVGPNQCAEVISQSLRSRFVYVFA 77
Query: 79 EGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
+ V G MCV F I + C TRGY+ F E DT Q ++WT L A
Sbjct: 78 KDVFGRALLDGVASMCVDTGRFQIRGEEECLTRGYIDARFHEVDTQQSDSWTFFLRSAAD 137
>gi|163740872|ref|ZP_02148265.1| hypothetical protein RG210_13566 [Phaeobacter gallaeciensis 2.10]
gi|161385863|gb|EDQ10239.1| hypothetical protein RG210_13566 [Phaeobacter gallaeciensis 2.10]
Length = 364
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 21 SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEG 80
S+AG +CN T V++ Y G WM+ GWW +P TCE V+ G L +R+YY +E
Sbjct: 31 SYAGLEICNDTAVPQSVSLAY-RDDGRWMSHGWWALPPETCERVLDGPLKNRFYYFRSE- 88
Query: 81 VSHSEHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+++W + C EF I ++C RGY F + DT
Sbjct: 89 ---AQNWQFLDERISFCTAPGEFTIYGDRDCAIRGYDSAFFAKIDT 131
>gi|163737446|ref|ZP_02144863.1| integral membrane protein-like protein [Phaeobacter gallaeciensis
BS107]
gi|161388972|gb|EDQ13324.1| integral membrane protein-like protein [Phaeobacter gallaeciensis
BS107]
Length = 364
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 21 SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEG 80
S+AG +CN T V++ Y G WM+ GWW +P TCE V+ L +R+YY +E
Sbjct: 31 SYAGLEICNDTAVPQSVSLAY-RDDGRWMSHGWWALPPETCERVLDDPLKNRFYYFRSE- 88
Query: 81 VSHSEHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+E+W + C EF I ++C RGY F + DT
Sbjct: 89 ---AENWQFLDERISFCTAPGEFTIYGDRDCAIRGYDSAFFAKIDT 131
>gi|99081727|ref|YP_613881.1| integral membrane protein-like [Ruegeria sp. TM1040]
gi|99038007|gb|ABF64619.1| integral membrane protein-like protein [Ruegeria sp. TM1040]
Length = 357
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
A +CN T VA+G+ G W ++GWW +P +C V+ A SR+YYL E
Sbjct: 24 AALDLCNDTTAAQRVAIGFQEA-GDWTSKGWWDLPAGSCTEVLSSASTSRFYYLRVE--- 79
Query: 83 HSEHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT-GQHENWTVQLTEPAQ 138
+E WA + CV +F I C RG+ + F DT G T PA
Sbjct: 80 -TEGWAFTDDRLGFCVADTDFEIKGEDGCARRGFRQENFARIDTRGAAAPDPTAQTRPAA 138
Query: 139 D 139
D
Sbjct: 139 D 139
>gi|56695978|ref|YP_166332.1| hypothetical protein SPO1081 [Ruegeria pomeroyi DSS-3]
gi|56677715|gb|AAV94381.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 152
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 12/118 (10%)
Query: 14 MIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGG--WMTEGWWQIPGNTCETVVKGALHS 71
++ + A +CN T + VA+ Y +GG W ++GW+ + C+TV++G L +
Sbjct: 25 LLLAPGTAQAELEICNDTPVVQSVALAY---RGGEDWNSQGWYVFEPDQCQTVLEGDLSN 81
Query: 72 RYYYLYAEGVSHSEHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQH 126
RYYY+ A +E W ++ CV Q F+IV +NC RG + F E DTG
Sbjct: 82 RYYYVTA----LAEGWVFDHQDIAFCVKQGVFDIVGAENCRDRGLITNLFREVDTGPR 135
>gi|126727532|ref|ZP_01743365.1| hypothetical protein RB2150_09514 [Rhodobacterales bacterium
HTCC2150]
gi|126703122|gb|EBA02222.1| hypothetical protein RB2150_09514 [Rhodobacterales bacterium
HTCC2150]
Length = 555
Score = 64.3 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 18 SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLY 77
+N + AG +CN T ++ +++GY GGW ++GWW I C T + L+ + YY
Sbjct: 49 TNEANAGLEICNTTGDVQEISIGYKG-DGGWTSKGWWLIEPTKCATPIGDDLNQQTYYYR 107
Query: 78 AEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQ-HENWTVQLT 134
AE ++ + C IV C RGY R F +D G +++T+ LT
Sbjct: 108 AE-INGGPFEGASYYFCTDTAAHTIVGDTKCKDRGYDRESFQPFDVGSGTKDYTLTLT 164
Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSH 83
G R+CN TKN V++GY + W +EGWW + C VV+G L YYY AE V+
Sbjct: 176 GLRICNETKNSQSVSIGYEGDEA-WTSEGWWVMEPGKCSMVVRGELKDTYYY-RAE-VNG 232
Query: 84 SEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHE---NWTVQLTEPA 137
+ C + I +C RGY R F DT + + T+Q PA
Sbjct: 233 GDFDGEAYYFCTTPKAYTIYGDTDCKGRGYDRESFRLIDTSKADGVFTLTMQPYAPA 289
>gi|218515008|ref|ZP_03511848.1| hypothetical protein Retl8_15604 [Rhizobium etli 8C-3]
Length = 72
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 6 LICFCFGAMI--FCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN 59
L F A + F ++ + A FRVCNGT+NL+GVA+GY A K GW+TEGWWQ+P
Sbjct: 18 LALFALAAFMPFFIADAARADFRVCNGTQNLVGVAIGYRA-KDGWVTEGWWQVPAT 72
>gi|154250752|ref|YP_001411576.1| hypothetical protein Plav_0296 [Parvibaculum lavamentivorans DS-1]
gi|154154702|gb|ABS61919.1| protein of unknown function DUF1036 [Parvibaculum lavamentivorans
DS-1]
Length = 333
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 50/120 (41%), Gaps = 11/120 (9%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSH 83
G CN T+ L+ AVGY G M+ GW +I TC +KG L Y+ YAE +
Sbjct: 214 GLSFCNKTEELVWAAVGYLD-SGDDMSSGWIRIEPGTCRKSIKGKLSGDTYFAYAEAIDE 272
Query: 84 SEH----------WAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQL 133
+ W G C F I C +RG+ + GF DTG +V L
Sbjct: 273 TGAVARRNGEPMIWGGTENFCTKATRFEIRGRDRCASRGFDQRGFMRIDTGGAARLSVDL 332
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 1 MLRSFLIC--FCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPG 58
M +S I F + F S + A +R CN T ++ + GW ++
Sbjct: 1 MRKSLQIAAAVLFACLAF-SAPAHADYRFCNKTSYVLD-GAIAVEAGAAATSSGWLRVQP 58
Query: 59 NTCETVVKGALHSRYYYLYAEGVS----HSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYL 114
C +++G + + YY+YA + ++++GN + C+ +DEF + + C RGY
Sbjct: 59 GECGVMLEGDIVEQKYYVYARTIDAHLGSVKYFSGNERFCIVEDEFAVEGREQCAMRGYD 118
Query: 115 RVGFTEYDTGQHENWTVQLTEPAQ 138
F + T + WT +E +
Sbjct: 119 SADFLQVATKPGKEWTTTFSEASD 142
>gi|119485996|ref|ZP_01620058.1| hypothetical protein L8106_05730 [Lyngbya sp. PCC 8106]
gi|119456771|gb|EAW37899.1| hypothetical protein L8106_05730 [Lyngbya sp. PCC 8106]
Length = 147
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 12 GAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
G++ F S + A +VCN T + + A Y +G W W+ I TC+ V L +
Sbjct: 21 GSVAFHSEPAQAYMKVCNRTGSTVRAAFAY-GEQGIWRNRSWFYINDGTCQVVYHPELWN 79
Query: 72 RYYYLYAEGVSHSEHWAGNVQMCVGQDE------FNIVDIKNCYTRGYLRVGFTEYDTGQ 125
RYYY YAE +S +W G++ CV D ++ C +RG + E DT +
Sbjct: 80 RYYYFYAEALSGGYYWTGDMSFCVNSDYGKKTTVSTPINASQC-SRGQKIIRMQEVDTHK 138
Query: 126 HENWTVQL 133
+++ + L
Sbjct: 139 TKDYVMNL 146
>gi|27383213|ref|NP_774742.1| hypothetical protein blr8102 [Bradyrhizobium japonicum USDA 110]
gi|27356387|dbj|BAC53367.1| blr8102 [Bradyrhizobium japonicum USDA 110]
Length = 390
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 5 FLICFCFGAM--IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCE 62
FL+ A+ +F S +FA ++CN ++ A+G K T GW++I TC
Sbjct: 61 FLMTLPAAAVSFVFSSAPAFADLKICNRMSYVVEAAIGIDD-KAATATRGWFRIDPATCR 119
Query: 63 TVVKGALHSRYYYLYAEGV----SHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGF 118
VV+G L + L A + + GN +CV QD F I + C + G +V F
Sbjct: 120 VVVQGTLTADRILLNARALGVYGASPIPQNGNDMLCVAQDNFVIAAARQCRS-GQTQVPF 178
Query: 119 TEYDTGQHEN 128
T+ Q ++
Sbjct: 179 TQVTPTQGDD 188
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 11 FGAMIFCSNV-SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQI-PGNTCETVVKGA 68
F M+ + S +G CN T + + A+ K + GW++I PG V G
Sbjct: 257 FKTMVDATQTPSPSGLTWCNDTPHKVMAAIATDDGKS-VTSRGWYRIDPGKCLHPDVSG- 314
Query: 69 LHSRYYYLYAEGVSHSE----------HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGF 118
+ + +AE V +W G Q+C + +F V+ +C RG+ GF
Sbjct: 315 -QPKQIFSFAEAVDADNRAVKLKDKPLNWGGEKQLCTRETKFETVEQTDCGARGFAATGF 373
Query: 119 TEYD 122
D
Sbjct: 374 GAVD 377
>gi|209964806|ref|YP_002297721.1| hypothetical protein RC1_1504 [Rhodospirillum centenum SW]
gi|209958272|gb|ACI98908.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 155
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Query: 19 NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYA 78
+V+ A VCN + VA+G GW + GWW I C ++ L YYL A
Sbjct: 40 SVADARLTVCNRVSEPVKVALGVEE-GDGWRSRGWWHIAPGECRALLDTDLKLLEYYLRA 98
Query: 79 EGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
E W G+ CV +F I +C RG+ GF T + T LT+
Sbjct: 99 EPEEPGTGWGGDFPFCVDGKDFEIGGDTDCEARGHRTAGFFLLSTDGASSMTHNLTD 155
>gi|254477063|ref|ZP_05090449.1| conserved hypothetical protein [Ruegeria sp. R11]
gi|214031306|gb|EEB72141.1| conserved hypothetical protein [Ruegeria sp. R11]
Length = 349
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 25 FRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHS 84
R+CN T +V + G W++EGW + C +V+G L +R+YY +E S
Sbjct: 33 IRLCNDTSVPQSSSVAF-RRDGQWISEGWTMLLPGACAPIVEGPLTNRFYYFRSE----S 87
Query: 85 EHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
W + CVG ++F I +C RGYL F + DT
Sbjct: 88 PGWTFRDERINFCVGPEDFTIFGDHDCAVRGYLPGAFAKIDT 129
>gi|254293242|ref|YP_003059265.1| hypothetical protein Hbal_0874 [Hirschia baltica ATCC 49814]
gi|254041773|gb|ACT58568.1| conserved hypothetical protein [Hirschia baltica ATCC 49814]
Length = 353
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 12/141 (8%)
Query: 7 ICFCFGAMIFCSNVSFA-------GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN 59
+ F +F FA G+R+CN T ++ + G P + EGW ++
Sbjct: 15 VFLAFATTMFAIFSPFAQAQSNANGWRLCNETSFVLEASTGRPESAASVVVEGWTRLRPG 74
Query: 60 TCETVVKGALHSRYYYLYAEGVSH----SEHWAGNVQMCVGQD-EFNIVDIKNCYTRGYL 114
C + L +Y+ A S W G+V +CV F + + +C G
Sbjct: 75 ECRIAIPAPLREGLHYVMARSSSAHHGGQRTWGGDVPLCVDSTGSFAVENPPSCTAMGLE 134
Query: 115 RVGFTEYDTGQHENWTVQLTE 135
F NWT +LTE
Sbjct: 135 ERSFRTVKIENRNNWTTRLTE 155
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYA----- 78
G +CN T + + A+G GW + GWW + + C + +L +Y+YA
Sbjct: 229 GMTICNRTPHRMWTAIGR-RRGNGWESRGWWSLDSDACARTIDESLIPTPHYVYAEIETD 287
Query: 79 EGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGF 118
EG+ H + + C+ + +F IV + C R Y F
Sbjct: 288 EGMRHLK--VADHIFCIARSKFAIVGREGCEVRAYKEADF 325
>gi|114797989|ref|YP_759149.1| hypothetical protein HNE_0419 [Hyphomonas neptunium ATCC 15444]
gi|114738163|gb|ABI76288.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 343
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAE---G 80
GF +CN TKN I A+ + +G W + GWW+I C V+ L +++YAE G
Sbjct: 221 GFTLCNRTKNRIWSAISRRSPEG-WESRGWWRIEAGGCARVIDRPLRGSEHFVYAEMEDG 279
Query: 81 VSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFT 119
+ CVG+ +F I ++C Y FT
Sbjct: 280 AQLRTLANADEAFCVGRSKFAISGREDCEDSAYRTALFT 318
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSH 83
G+++CN T +I AVG+ G EGW ++ C + G L + +YLY G +
Sbjct: 32 GWKLCNRTSFVIEAAVGHQQ-GAGITVEGWTKLHPGACRIALPGPLKAGVHYLY--GRTS 88
Query: 84 SEH------WAGNVQMCVGQD-EFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
+ H W G ++CV F++ +C G GF D + +WT TE
Sbjct: 89 TAHLGGGREWGGRQELCVDPTGGFSLESPPDCAAMGLEAQGFRPVDITKDGSWTNLFTE 147
>gi|81299292|ref|YP_399500.1| protease [Synechococcus elongatus PCC 7942]
gi|81168173|gb|ABB56513.1| protease [Synechococcus elongatus PCC 7942]
Length = 371
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 23 AGFRVCNGTKNLIGVAVGY-PAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGV 81
AG+ VCN + + VA+ Y + +EGWW + + C+ Y++AE
Sbjct: 257 AGYEVCNQSGENLSVAIAYFDTSIDSYRSEGWWNLDQSKCQFFPNLLDSVDEVYVFAE-- 314
Query: 82 SHSEHWAGNVQMCVGQDEFNIVDI--KNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
S W+G+ C+ +D F+ D C + Y + GF + + G + WT LT P+Q
Sbjct: 315 SDQTLWSGDFPFCMQEDAFDYPDANRDRCPSPAYSK-GFLKVEVGDAKTWTTNLT-PSQ 371
>gi|90422333|ref|YP_530703.1| hypothetical protein RPC_0813 [Rhodopseudomonas palustris BisB18]
gi|90104347|gb|ABD86384.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 347
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 51/124 (41%), Gaps = 15/124 (12%)
Query: 11 FGAMIFCSNV-SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQI-PGNTCETVVKGA 68
F AMI S G CN T + I AVG K + GW++I PG V G
Sbjct: 214 FDAMIKAVEAPSSTGLTWCNDTPHKIMAAVGSDDGKA-VTSRGWYRIDPGKCLHPDVSG- 271
Query: 69 LHSRYYYLYAEGVSHSEH----------WAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGF 118
+ Y +AE V+ W G V +C +F I D +C RG+ R GF
Sbjct: 272 -QPKQLYSFAEAVNADNRAVKIKDKPLSWGGGVMLCTRDSKFEINDQHDCAARGFNRTGF 330
Query: 119 TEYD 122
T D
Sbjct: 331 TSVD 334
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 21 SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEG 80
++A ++CN ++ A+G K + GW++I C VV+G L + L+A
Sbjct: 36 AYADLKLCNRMSYVVEAAIGIDD-KASTASRGWFRIDPAQCRVVVQGTLTADRILLHARA 94
Query: 81 V----SHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
+ + G+ ++C+ D F I + C + G FTE
Sbjct: 95 LGVYGASPVPQNGSDRLCIAPDNFVIAAARQCRS-GQTAAPFTE 137
>gi|56751047|ref|YP_171748.1| protease [Synechococcus elongatus PCC 6301]
gi|56686006|dbj|BAD79228.1| protease [Synechococcus elongatus PCC 6301]
Length = 316
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 23 AGFRVCNGTKNLIGVAVGY-PAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGV 81
AG+ VCN + + VA+ Y + +EGWW + + C+ Y++AE
Sbjct: 202 AGYEVCNQSGENLSVAIAYFDTSIDSYRSEGWWNLDQSKCQFFPNLLDSVDEVYVFAE-- 259
Query: 82 SHSEHWAGNVQMCVGQDEFNIVDI--KNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
S W+G+ C+ +D F D C + Y + GF + + G + WT LT P+Q
Sbjct: 260 SDQTLWSGDFPFCMQEDAFEYPDANRDRCPSPAYSK-GFLKVEVGDAKTWTTNLT-PSQ 316
>gi|304320367|ref|YP_003854010.1| hypothetical protein PB2503_03967 [Parvularcula bermudensis
HTCC2503]
gi|303299269|gb|ADM08868.1| hypothetical protein PB2503_03967 [Parvularcula bermudensis
HTCC2503]
Length = 358
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 11/134 (8%)
Query: 2 LRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC 61
L FL+C F + + A + CN T + A+GY +T GWW++ C
Sbjct: 19 LVGFLLC-----APFLVSSAHAQYSFCNKTSYALSAAIGY-VDDEDLVTRGWWRLRSGQC 72
Query: 62 ETVVKGALHSRYYYLYAEGVS----HSEHWAGNVQMCVGQDE-FNIVDIKNCYTRGYLRV 116
+ V+ + Y++YAE + W+G +CV D F + D +C + +
Sbjct: 73 KRVLSDRVQPGRYFVYAEAIPGHRGELRTWSGETPLCVQNDSLFTLRDQNSCTSDPRRQR 132
Query: 117 GFTEYDTGQHENWT 130
F D + + T
Sbjct: 133 RFLPVDVDESTDGT 146
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Query: 18 SNVSFAGFRVCNGTKNLIGVAVGYPAVKGG-WMTEGWWQIPGNTCETVVKGALHSRYYYL 76
S S GF CN T + A P + + + GWW++ C V +G++ + +Y+
Sbjct: 222 STDSNRGFVFCNATMLPVWAAFAQPDSQSEEYTSSGWWRLESQDCAKVRRGSVENENFYV 281
Query: 77 YA--EGVSHSEHWA-GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQL 133
Y E S A G+ C+ +F C GY F + + WT Q
Sbjct: 282 YGVMEADGRSVPLAGGDTSFCISTVQFEAPGDAPCEELGYETANFRRVEATNSKAWTFQF 341
Query: 134 T 134
T
Sbjct: 342 T 342
>gi|86747805|ref|YP_484301.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
palustris HaA2]
gi|86570833|gb|ABD05390.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris HaA2]
Length = 318
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 19 NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYA 78
+ A ++CN +I A+G K T GW++I C V++GAL + L+A
Sbjct: 5 TTAHADLKICNRMSYVIEAAIGIDD-KATTATRGWFRIDPARCRVVLQGALTADRVMLHA 63
Query: 79 EGV----SHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHEN 128
+ + G +CV QD F I + C + G FTE Q E+
Sbjct: 64 RSLAVYGASPVPQNGTDPLCVAQDNFVIAAARQCRS-GQTLAAFTEIRPAQTED 116
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 28 CNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSE-- 85
CN TK I AVG K + GW++I C GA R + +AE V +
Sbjct: 203 CNDTKAKIMAAVGEDDGKT-ISSRGWYRIEPGKCLRPDLGAQPKRVFS-FAEAVDDNARP 260
Query: 86 --------HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEP 136
+W G +C +F I + +C RG GF D T++ T P
Sbjct: 261 ILLKGKPLNWGGATLLCTRDSKFEISEQGDCSARGLNATGFAPADLSGGSR-TLRFTTP 318
>gi|126739223|ref|ZP_01754917.1| hypothetical protein RSK20926_22524 [Roseobacter sp. SK209-2-6]
gi|126719840|gb|EBA16548.1| hypothetical protein RSK20926_22524 [Roseobacter sp. SK209-2-6]
Length = 342
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 21 SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEG 80
++AG +CN T ++V + +G W +EGWWQ+ C ++ R YY A+
Sbjct: 24 AWAGLEICNDTAVRQSLSVAF-QTEGEWQSEGWWQLEPQDCVAPLQDETDQRIYYYLAQ- 81
Query: 81 VSHSEHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYD 122
S W + C G F+I + ++C G+ + F + D
Sbjct: 82 ---SPGWIFAHDRIAFCTGAAAFSIRNTQDCEGLGFEKEYFAKID 123
>gi|260762500|ref|ZP_05874837.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260672926|gb|EEX59747.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
Length = 52
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 99 EFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
EF I +++C+ RG+ R GF EYDTG+ +W VQLT+
Sbjct: 1 EFRITGVQDCFARGFQRNGFQEYDTGEQSSWMVQLTD 37
>gi|115522675|ref|YP_779586.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
palustris BisA53]
gi|115516622|gb|ABJ04606.1| Peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
BisA53]
Length = 333
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 49/124 (39%), Gaps = 15/124 (12%)
Query: 11 FGAMIFCSNV-SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQI-PGNTCETVVKGA 68
F MI S G CN T + I AV K + GW+++ PG V G
Sbjct: 200 FDTMIKAVQAPSPTGLTWCNDTPHKIMAAVASDDGKT-VTSRGWYRVDPGKCLHPDVSG- 257
Query: 69 LHSRYYYLYAEGVSHSE----------HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGF 118
R Y +AE V + +W GNV +C + +F I D +C RG GF
Sbjct: 258 -QPRQIYSFAEAVDANNRALKLKDKPLNWGGNVTLCTRESKFEINDQGDCVARGLNPTGF 316
Query: 119 TEYD 122
D
Sbjct: 317 APVD 320
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 10/129 (7%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
S + G + + A ++CN ++ A+G K T GW+++ C
Sbjct: 9 SLAVLLALG----ITTPAHADLKLCNRMSYVVEAAIGIDD-KASTATRGWFRLDPAQCRV 63
Query: 64 VVKGALHSRYYYLYAEGV----SHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFT 119
V +G L + L+A + + G ++C+ D F I + C G + FT
Sbjct: 64 VAQGTLSADRLLLHARALGVYGASPVPQDGTDRLCIAPDNFVIAAARQCRG-GQTQAPFT 122
Query: 120 EYDTGQHEN 128
E E+
Sbjct: 123 EIKPSPTED 131
>gi|146337892|ref|YP_001202940.1| hypothetical protein BRADO0777 [Bradyrhizobium sp. ORS278]
gi|146190698|emb|CAL74702.1| conserved hypothetical protein; Putative peptidoglycan-binding
domain-containing protein [Bradyrhizobium sp. ORS278]
Length = 355
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
A ++CN ++ A+G K T GW+++ TC V++G + + L+A +S
Sbjct: 45 ADLKLCNRMSYVVEAAIGIDE-KAATATRGWFRLDPATCRVVLQGTMTADRILLHARALS 103
Query: 83 ----HSEHWAGNVQMCV-GQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTV 131
GN Q+CV D F I + C T G FT+ + ++ T+
Sbjct: 104 LYGASPMAENGNDQLCVAASDNFVIAAARQCRT-GQTPAAFTQVTPTKTDDGTL 156
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 21 SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC-ETVVKGALHSRYYYLYAE 79
S G CN T + + AVG + ++ GW++I C + G + Y +AE
Sbjct: 233 SPVGLTWCNDTPHKVMAAVGTDDGRT-VVSRGWYRIDAGKCLHPDITG--QPKKVYSFAE 289
Query: 80 GVSHSE----------HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYD 122
V +W G VQ+C +++F + +C +RG+ GFT D
Sbjct: 290 AVDDDNRTIKLKNKPLNWGGLVQLCTRENKFETTEQGDCPSRGFTATGFTAVD 342
>gi|148258515|ref|YP_001243100.1| hypothetical protein BBta_7330 [Bradyrhizobium sp. BTAi1]
gi|146410688|gb|ABQ39194.1| hypothetical protein BBta_7330 [Bradyrhizobium sp. BTAi1]
Length = 372
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 3 RSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCE 62
R L ++ + + A ++CN ++ A+G K T GW+++ TC
Sbjct: 42 RVALALAVILPLLTFTTPARADLKLCNRMSYVVEAAIGIDE-KAATATRGWFRLDPATCR 100
Query: 63 TVVKGALHSRYYYLYAEGVS---HSEHWA-GNVQMCVG-QDEFNIVDIKNCYTRGYLRVG 117
V++GA+ + L+A +S S A GN Q+CV D F I + C G
Sbjct: 101 VVLQGAMTAERILLHARALSLYGASPIAANGNDQLCVATTDNFVIAAARQCRA-GQTPAA 159
Query: 118 FTEYDTGQHEN--WTVQLTEPAQ 138
FT+ + ++ T L E A+
Sbjct: 160 FTQVTPTKSDDGSLTAYLAESAE 182
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 11 FGAMI-FCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGW--MTEGWWQIPGNTC-ETVVK 66
F M+ S G CN T + + AV A G ++ GW++I C +
Sbjct: 239 FATMVDAVQTPSPTGLTWCNDTPHKVMAAV---ATDDGRTVVSRGWYRIDAGKCLHPDIT 295
Query: 67 GALHSRYYYLYAEGVSHSE----------HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRV 116
G + Y +AE V +W G VQ+C +++F + +C +RG+
Sbjct: 296 G--QPKKVYSFAEAVDDENRTIKLKNKPLNWGGLVQLCTRENKFETTEQGDCPSRGFTAT 353
Query: 117 GFTEYD 122
GFT D
Sbjct: 354 GFTAVD 359
>gi|254465438|ref|ZP_05078849.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206686346|gb|EDZ46828.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 334
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Query: 19 NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYA 78
+ + AG +CN T L +AV G W+T+GW + C + R++Y A
Sbjct: 19 SAASAGTSICNDTGALHQLAV-TARTDGSWITQGWQALAPGDCVDPLPEGYEGRFFYFRA 77
Query: 79 EGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
E H + +++ C F +C RGY F ++ T+ L+ +Q
Sbjct: 78 ESPGH-QFRDDSIRFCTKAGPFRAGGSGDCDARGYREQAFARARI-STDSQTIALSSRSQ 135
>gi|316932096|ref|YP_004107078.1| hypothetical protein Rpdx1_0708 [Rhodopseudomonas palustris DX-1]
gi|315599810|gb|ADU42345.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
DX-1]
Length = 339
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 11 FGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALH 70
F + ++ + A ++CN ++ A+G + G T GW +I C V++GAL+
Sbjct: 19 FVTTLALTSAAHADLKLCNRMSYVVEAAIGVDS-SGATATRGWLRIDPAQCRVVLQGALN 77
Query: 71 SRYYYLYAE-----GVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQ 125
+ L A G S G ++CV +D F I + C L FTE
Sbjct: 78 ADKIMLNARVLPLYGASPLPQ-NGTDRLCVAEDNFVIAAARQCRGSQTL-AAFTEIKPTD 135
Query: 126 HEN 128
E+
Sbjct: 136 TED 138
Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 41/112 (36%), Gaps = 12/112 (10%)
Query: 21 SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEG 80
S G CN T+ I AV K + GW+ I C+ G R + +AE
Sbjct: 218 SGGGLTWCNDTRYKIMAAVAEDDGKT-ITSRGWYGIAPGQCQRPDLGTQPKRVFS-FAEA 275
Query: 81 VSHSE----------HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYD 122
V S +W G +C +F I + +C RG GF D
Sbjct: 276 VDGSGRPVSIKGRALNWGGGTLLCTRDSKFEIGEQGDCAGRGLTATGFAAVD 327
>gi|91974555|ref|YP_567214.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
palustris BisB5]
gi|91681011|gb|ABE37313.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris BisB5]
Length = 384
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 6/120 (5%)
Query: 13 AMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSR 72
A + + + A ++CN +I A+G K T GW +I C V++GAL +
Sbjct: 65 ASLAGNTAAHADLKLCNRMSYVIETAIGI-DDKATTATRGWLRIDPAQCRVVLQGALSAD 123
Query: 73 YYYLYAEGV----SHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHEN 128
L+A + + G ++C+ + F I + C + G FTE Q ++
Sbjct: 124 RVMLHARALAVYGASPIPQNGTDRLCITPENFVIAAARQCRS-GQTLAPFTEIKPTQQDD 182
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 13/123 (10%)
Query: 11 FGAMIFC-SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGAL 69
F MI + S G CN T++ I A+ K + GW++I C AL
Sbjct: 251 FDTMIKAVESPSATGLTWCNDTRSRIMAAIAEDDGKT-ITSRGWYRIEPGKCLRPDLSAL 309
Query: 70 HSRYYYLYAEGVS----------HSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFT 119
R + +AE V +W G +C + +F I + +C RG GF
Sbjct: 310 PKRVFS-FAEAVDGNARPITLKDKPLNWGGATLLCTRESKFEISEQGDCSARGLNATGFA 368
Query: 120 EYD 122
D
Sbjct: 369 PVD 371
>gi|192289062|ref|YP_001989667.1| hypothetical protein Rpal_0632 [Rhodopseudomonas palustris TIE-1]
gi|192282811|gb|ACE99191.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 339
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
+ ++ + A ++CN ++ A+G + G + GW +I C VV+GAL++
Sbjct: 23 LSLTSAAHADLKLCNRMSYVVETAIGVDS-NGTTASRGWLRIDPAQCRVVVQGALNADRI 81
Query: 75 YLYAE-----GVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHEN 128
L A GVS G ++C+ +D F I + C G FTE E+
Sbjct: 82 MLNARALPVYGVSPLPQ-NGTDRLCIAEDNFVIAAARQCRG-GQTLAAFTEIKPTDTED 138
Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 49/126 (38%), Gaps = 14/126 (11%)
Query: 21 SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEG 80
S +G CN TK I AV K + GW+ + C GA R + +AE
Sbjct: 218 SGSGLTWCNDTKYKIMAAVAEDDGKT-ITSRGWYGVAPGQCLRPDLGAQPKRVFS-FAEA 275
Query: 81 VSHSE----------HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWT 130
V S +W G +C +F + + +C RG GF D + T
Sbjct: 276 VDSSGRPVTIKGRALNWGGGTTLCTRDSKFELGEQGDCAARGLAATGFAAIDLSSGK--T 333
Query: 131 VQLTEP 136
++L+ P
Sbjct: 334 LRLSAP 339
>gi|39933705|ref|NP_945981.1| hypothetical protein RPA0628 [Rhodopseudomonas palustris CGA009]
gi|39647551|emb|CAE26072.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 373
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
+ ++ + A ++CN ++ A+G + G + GW +I C VV+GAL++
Sbjct: 57 LSLTSAAHADLKLCNRMSYVVETAIGVDS-NGTTASRGWLRIDPAQCRVVVQGALNADRI 115
Query: 75 YLYAE-----GVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHEN 128
L A GVS G ++C+ +D F I + C G FTE E+
Sbjct: 116 MLNARALPVYGVSPLPQ-NGTDRLCIAEDNFVIAAARQCRG-GQTLAAFTEIKPTDTED 172
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 52/137 (37%), Gaps = 15/137 (10%)
Query: 11 FGAMIFC-SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGAL 69
F MI S +G CN TK I AV K + GW+ + C GA
Sbjct: 241 FDVMIKAVQQPSGSGLTWCNDTKYKIMAAVAEDDGKT-ITSRGWYGVAPGQCLRPDLGAQ 299
Query: 70 HSRYYYLYAEGVSHSE----------HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFT 119
R + +AE V S +W G +C +F + + +C RG GF
Sbjct: 300 PKRVFS-FAEAVDSSGRPVTIKGRALNWGGGTTLCTRDSKFELGEQGDCAARGLAATGFA 358
Query: 120 EYDTGQHENWTVQLTEP 136
D + T++L+ P
Sbjct: 359 AIDLSSGK--TLRLSAP 373
>gi|114569007|ref|YP_755687.1| peptidoglycan binding domain-containing protein [Maricaulis maris
MCS10]
gi|114339469|gb|ABI64749.1| peptidoglycan-binding domain 1 [Maricaulis maris MCS10]
Length = 331
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 27 VCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGA---------LHSRYYYLY 77
+CN T ++ A G+P V+GG EGW ++ C TV +++ Y
Sbjct: 28 LCNETSYIVEAAAGWP-VEGGVAIEGWTRLRPGDCATVASDVDLDGDQPIFFYAKSSIAY 86
Query: 78 AEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEP 136
GV W G + +CV + +F +V C + G F + G+ TV L EP
Sbjct: 87 LGGV---REWRGTIPLCVDEADFEVVANTRCSSLGMASRDFFIRE-GEDRERTV-LVEP 140
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVS 82
+G +CN I VA+G+ V W + GWW+I C V+ L + + YAE ++
Sbjct: 211 SGLTMCNEADGDIAVAIGH-QVGSIWQSRGWWRIHAGECARVLATRLATDNAFYYAERIN 269
Query: 83 HSEHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
G C F +C RGY F ++TEP++
Sbjct: 270 TGTRRGLTEGRESFCTAPARFVAEGRGDCPDRGYTAANFR------------RITEPSE 316
>gi|83859291|ref|ZP_00952812.1| hypothetical protein OA2633_12840 [Oceanicaulis alexandrii
HTCC2633]
gi|83852738|gb|EAP90591.1| hypothetical protein OA2633_12840 [Oceanicaulis alexandrii
HTCC2633]
Length = 325
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSH 83
G +VCN +GVAV A G+ T GWW+I C + L S Y+YA+ +
Sbjct: 204 GLQVCNDANLPMGVAVAR-AAGDGYETRGWWRIAPGGCAQTLSAQLTSNETYVYAQLIDA 262
Query: 84 S--EHWAGNVQ-MCVGQDEFNIVDIKNCYTRGY 113
AG + C+ F C G+
Sbjct: 263 DALRPLAGGTEAFCITPARFTSQTRSECTNSGF 295
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
ML LI F A+ F S + AG +VCN T ++ A + G EGW +I
Sbjct: 1 MLNRILIA-AFIALGF-SGAAQAG-QVCNETSFMVEAAKAW-RTPTGLAVEGWARIAPGG 56
Query: 61 CETVVKGALHSRYYYLYAEG----VSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRV 116
C + G S YLYA + W G++ +CV + +F + +C T G
Sbjct: 57 CAEI--GPSTSSDQYLYARTTRAYLGGVREWRGSLDICVDETDFAFEGVADCETLGLETR 114
Query: 117 GFTEYDTGQHEN 128
F + + ++
Sbjct: 115 KFRQLTDAERDH 126
>gi|73669693|ref|YP_305708.1| hypothetical protein Mbar_A2201 [Methanosarcina barkeri str.
Fusaro]
gi|72396855|gb|AAZ71128.1| hypothetical protein Mbar_A2201 [Methanosarcina barkeri str.
Fusaro]
Length = 111
Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 45 KGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVD 104
G W+ +GWW+I + + + G+ ++ Y+Y YAEG ++ W G+ V Q F D
Sbjct: 29 SGDWLVKGWWEIKPRSSQRI--GSTNNSYFYYYAEGNGYT--WGGDSISYVEQQAFGHCD 84
Query: 105 IKNCYTRGYLRVGFTEYDTGQHENWTVQL 133
T G RVG E + ++ +TV L
Sbjct: 85 NS---TLG-RRVGMREDNCNNYDTYTVSL 109
>gi|312878924|ref|ZP_07738724.1| protein of unknown function DUF1036 [Aminomonas paucivorans DSM
12260]
gi|310782215|gb|EFQ22613.1| protein of unknown function DUF1036 [Aminomonas paucivorans DSM
12260]
Length = 142
Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 25 FRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHS 84
++ N + + VAV Y + W+TEGWW T+ +RY Y+YAEG +
Sbjct: 28 IQISNRSGQTLSVAVHYLNPQKQWVTEGWWVFEPGELSTLKGIETTNRYLYVYAEGTDDA 87
>gi|229035188|ref|ZP_04189125.1| hypothetical protein bcere0028_52070 [Bacillus cereus AH1271]
gi|228728136|gb|EEL79175.1| hypothetical protein bcere0028_52070 [Bacillus cereus AH1271]
Length = 243
Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25 FRVCNGTKNLIGVAVGYPAVK---GGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGV 81
R N T + +A+ Y K W +GWWQIP N T + ++++ ++ +A
Sbjct: 3 LRFKNNTNLNLEIAIAYYDEKCTGSKWRKQGWWQIPSNGEITALSENVNNKKFFYFARST 62
Query: 82 SHSEHWAGNVQMCVGQDEF 100
+++ W G++ + + F
Sbjct: 63 NNAYIWNGDMTTYLPNEVF 81
>gi|312878925|ref|ZP_07738725.1| protein of unknown function DUF1036 [Aminomonas paucivorans DSM
12260]
gi|310782216|gb|EFQ22614.1| protein of unknown function DUF1036 [Aminomonas paucivorans DSM
12260]
Length = 169
Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 25 FRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHS 84
+V N + + VAV Y + W+TEGWW T+ +RY Y+YAEG +
Sbjct: 28 IQVSNRSGQTLSVAVHYLNPQKQWVTEGWWVFEPGELSTLKGIETTNRYLYVYAEGTDDA 87
>gi|316933374|ref|YP_004108356.1| hypothetical protein Rpdx1_2014 [Rhodopseudomonas palustris DX-1]
gi|315601088|gb|ADU43623.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
DX-1]
Length = 145
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 1 MLRSFLICFCFGAMIFCSNV-SFAGFRVCNGTKNLIGVAVGYP-AVKGGWMTEGWWQIPG 58
M+ L+ G + N S +CN T L+ + +P VK WM GW+QI
Sbjct: 8 MVAGILLSLGAGTAVHAQNTDSTFNLTICNKTSTLVRMMFFHPEGVKDMWMLSGWYQIKP 67
Query: 59 NTCETVVKGALHSRYYYLYAE 79
++C T + L Y+Y +A+
Sbjct: 68 SSCSTFEQ--LPRGYFYWFAK 86
>gi|300868070|ref|ZP_07112707.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300333908|emb|CBN57885.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 146
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 2 LRSFLICFCFGAMIFCSNVSFA-----GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQI 56
LR+ + G + F S+V FA VCN + VA+ Y + G + ++GW Q+
Sbjct: 3 LRNLAMAVGLGMVGFISSVVFATPANASMTVCNRAGSKAFVAISYYS-DGNFWSKGWLQL 61
Query: 57 PGNTCETVVKGALHSRYYYLYAE---GVSHSEHWAGNVQMCV----GQDEFNIVDIKN-- 107
+C T + G + + +YAE G+ S G+V+ CV Q + I + N
Sbjct: 62 NPGSCGTAIAGRVSNAEIGVYAETFTGIVES----GDVRRCVVWVQVQPSWTIRNADNPA 117
Query: 108 -CYTRGYLRVGFTEYDTGQHENWTVQL 133
C +G GF T ++T ++
Sbjct: 118 RCKGKGREMKGFRVIKTNDSPDYTYEV 144
>gi|160896247|ref|YP_001561829.1| AMP-dependent synthetase/ligase [Delftia acidovorans SPH-1]
gi|160361831|gb|ABX33444.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 499
Score = 37.4 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 39 VGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
VG +G + G+W++PG T ET+V G LH+
Sbjct: 341 VGEVVARGDLLMSGYWRLPGKTAETLVNGWLHT 373
>gi|304316255|ref|YP_003851400.1| XRE family transcriptional regulator [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777757|gb|ADL68316.1| transcriptional regulator, XRE family [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 271
Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
++ +NV F V N TK+ V Y V G + IPG C VK S Y
Sbjct: 165 VYNNNVKTTTFSVINSTKS----EVDYKVVPAGDSYKVDLSIPGQKCWVSVKVDGASTYQ 220
Query: 75 YLYAEGVSHSEHWAGNVQMCVG 96
YL G++ + N+++ +G
Sbjct: 221 YLMTSGMTKTFDVKNNIEILMG 242
>gi|317401171|gb|EFV81818.1| long-chain-fatty-acid-CoA ligase [Achromobacter xylosoxidans C54]
Length = 501
Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 38 AVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
A+G V+G + G+W++P T ET+V G LH+
Sbjct: 345 AIGEVVVRGDLVMSGYWRLPEKTAETIVDGWLHT 378
>gi|172055050|ref|YP_001806377.1| hypothetical protein cce_4965 [Cyanothece sp. ATCC 51142]
gi|171701331|gb|ACB54311.1| hypothetical protein cce_4965 [Cyanothece sp. ATCC 51142]
Length = 177
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 27 VCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEH 86
V N T + V V Y GW TEGW ++P + V A +RY YAE ++
Sbjct: 75 VRNNTNEPLWVVVHYLG-DYGWTTEGWIEVPSRSVVPV--AATENRYILFYAEN-DQGKY 130
Query: 87 WAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
W G++ V+I NC R + EY T
Sbjct: 131 WGGDIP----------VEICNCAMRPNSASPYGEYYT 157
>gi|254473831|ref|ZP_05087226.1| peptidase M19, renal dipeptidase [Pseudovibrio sp. JE062]
gi|211957217|gb|EEA92422.1| peptidase M19, renal dipeptidase [Pseudovibrio sp. JE062]
Length = 406
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 12/105 (11%)
Query: 20 VSFAGFR-VCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYA 78
VS G + CN +NL V A K G + G+W C+ KG S Y +
Sbjct: 277 VSHTGVKGACNTPRNLTDDQVRAVAAKNGLIGIGFWAAA--ACDISPKGVAKSIAYAVSI 334
Query: 79 EGVSH---SEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
G+ H + G+V EF +V T+ L +GF+E
Sbjct: 335 AGIDHVALGSDFDGSVTTAFDASEFAVV------TQELLNLGFSE 373
>gi|326382947|ref|ZP_08204637.1| fatty acid-CoA ligase FadD13_1 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198537|gb|EGD55721.1| fatty acid-CoA ligase FadD13_1 [Gordonia neofelifaecis NRRL
B-59395]
Length = 510
Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 40 GYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
G V+G +T G+WQ P T ET+V G LH+
Sbjct: 354 GELVVRGANITAGYWQRPDATAETIVDGWLHT 385
>gi|332283749|ref|YP_004415660.1| fatty acid CoA ligase [Pusillimonas sp. T7-7]
gi|330427702|gb|AEC19036.1| fatty acid CoA ligase [Pusillimonas sp. T7-7]
Length = 516
Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 25 FRVCNGTKNLIGVAV-GYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
RV + N + V V G +G +T+G+W+ P T ET+V G LH+
Sbjct: 339 LRVVDADMNDVPVGVCGEVIARGPAVTQGYWRNPQATAETIVDGWLHT 386
>gi|114777950|ref|ZP_01452864.1| hypothetical protein SPV1_05994 [Mariprofundus ferrooxydans PV-1]
gi|114551737|gb|EAU54289.1| hypothetical protein SPV1_05994 [Mariprofundus ferrooxydans PV-1]
Length = 415
Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 57 PGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRV 116
PG + + + AL + Y+YL + HW +++ + +F + ++K+ TRG R
Sbjct: 51 PGRSISYIAELALMTPYHYLVT--LESESHWTHVLRIDMNSPDFLVREVKDPNTRGIFRS 108
Query: 117 GFTEYDTGQHE 127
Y G+H+
Sbjct: 109 LNEVYPIGRHK 119
>gi|311103731|ref|YP_003976584.1| AMP-binding protein [Achromobacter xylosoxidans A8]
gi|310758420|gb|ADP13869.1| AMP-binding enzyme family protein 1 [Achromobacter xylosoxidans A8]
Length = 505
Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 39 VGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
+G V+G + G+W++P T ETV+ G LH+
Sbjct: 350 IGEVVVQGDLVMSGYWRLPEKTAETVLDGWLHT 382
>gi|260589537|ref|ZP_05855450.1| putative metallo-beta-lactamase domain protein [Blautia hansenii
DSM 20583]
gi|260540105|gb|EEX20674.1| putative metallo-beta-lactamase domain protein [Blautia hansenii
DSM 20583]
Length = 704
Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 13/44 (29%)
Query: 47 GWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGN 90
GWM GW ++ N +YYLY +GV S+ W GN
Sbjct: 644 GWMVTGWQKVGDN-------------WYYLYDDGVMASDTWVGN 674
Searching..................................................done
Results from round 2
>gi|254780443|ref|YP_003064856.1| hypothetical protein CLIBASIA_01640 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040120|gb|ACT56916.1| hypothetical protein CLIBASIA_01640 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 141
Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats.
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT
Sbjct: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE
Sbjct: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
Query: 121 YDTGQHENWTVQLTEPAQDRR 141
YDTGQHENWTVQLTEPAQDRR
Sbjct: 121 YDTGQHENWTVQLTEPAQDRR 141
>gi|39937252|ref|NP_949528.1| hypothetical protein RPA4192 [Rhodopseudomonas palustris CGA009]
gi|192293033|ref|YP_001993638.1| hypothetical protein Rpal_4672 [Rhodopseudomonas palustris TIE-1]
gi|39651110|emb|CAE29633.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
gi|192286782|gb|ACF03163.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
TIE-1]
Length = 194
Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats.
Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
+ FG ++ S + A FR+CN T + +G+A+GY V G W TEGWW + +CET
Sbjct: 19 TMTAALAFGVLLSSSVPAAADFRLCNNTSSRVGIALGYKDVDG-WTTEGWWNVSSRSCET 77
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+++GAL +RYYY+YA W+G MC EF I +NC RG+ R GF E DT
Sbjct: 78 LLRGALVARYYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDT 137
Query: 124 GQHENWTVQLTEPAQD 139
G+ WTVQLTE +
Sbjct: 138 GEQRAWTVQLTESNEQ 153
>gi|315122108|ref|YP_004062597.1| hypothetical protein CKC_01790 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495510|gb|ADR52109.1| hypothetical protein CKC_01790 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 139
Score = 206 bits (524), Expect = 9e-52, Method: Composition-based stats.
Identities = 97/137 (70%), Positives = 112/137 (81%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
M+R FLIC G MI S+VS+AGFRVCNGTKNLIGVA+GYP G W T+GWW IP N+
Sbjct: 1 MIRGFLICIFLGTMIIFSSVSYAGFRVCNGTKNLIGVAIGYPLSNGHWTTQGWWHIPKNS 60
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
CET+++GAL SRYYYL+ EG+SH E W GNVQMCVG+DEF IVDIK+CY RGYLR F E
Sbjct: 61 CETIIEGALSSRYYYLHVEGISHGERWLGNVQMCVGEDEFTIVDIKDCYARGYLRASFIE 120
Query: 121 YDTGQHENWTVQLTEPA 137
YDTGQHE+WTVQLTE +
Sbjct: 121 YDTGQHESWTVQLTESS 137
>gi|75675180|ref|YP_317601.1| hypothetical protein Nwi_0987 [Nitrobacter winogradskyi Nb-255]
gi|74420050|gb|ABA04249.1| Protein of unknown function DUF1036 [Nitrobacter winogradskyi
Nb-255]
Length = 194
Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats.
Identities = 58/137 (42%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Query: 2 LRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC 61
+ FL + S + A FR+CN T + +G+A+GY + G W TEGWW I + C
Sbjct: 18 IAGFLPALGLVVVCLWSAPAAADFRLCNNTSSRVGIALGYKSADG-WTTEGWWNISSHAC 76
Query: 62 ETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEY 121
ET+++G L +RYYY+YA H W+G MC EF I +NC RG+ R GF E
Sbjct: 77 ETLLRGTLIARYYYIYALDYDHGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEI 136
Query: 122 DTGQHENWTVQLTEPAQ 138
DTG WTVQLTE +
Sbjct: 137 DTGDQRAWTVQLTESGE 153
>gi|86748549|ref|YP_485045.1| hypothetical protein RPB_1424 [Rhodopseudomonas palustris HaA2]
gi|86571577|gb|ABD06134.1| Protein of unknown function DUF1036 [Rhodopseudomonas palustris
HaA2]
Length = 197
Score = 204 bits (518), Expect = 5e-51, Method: Composition-based stats.
Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 1/136 (0%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
+ A++ S + A FR+CN T + +G+A+GY G W TEGWW + +CET
Sbjct: 19 ALTAALAVCALMLASVPAAADFRLCNNTSSRVGIALGYKDADG-WTTEGWWNVSSRSCET 77
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+++G L +RYYY+YA W+G MC EF I +NC RG+ R GF E DT
Sbjct: 78 LLRGTLVARYYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDT 137
Query: 124 GQHENWTVQLTEPAQD 139
G+ WTVQLTE ++
Sbjct: 138 GEQRAWTVQLTESSEQ 153
>gi|209884227|ref|YP_002288084.1| hypothetical protein OCAR_5084 [Oligotropha carboxidovorans OM5]
gi|209872423|gb|ACI92219.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 187
Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats.
Identities = 56/132 (42%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
Query: 8 CFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG 67
A+ + A FR+CN T + +G+A+GY +G W+TEGWW I + CET++KG
Sbjct: 17 LLAVPALCAFPAPAHADFRLCNNTSSRVGIALGYKDAEG-WVTEGWWNISSHACETLLKG 75
Query: 68 ALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHE 127
L +RYYY+Y W+G MC EF I NC RGY R GF E DTG+
Sbjct: 76 TLVARYYYIYGLDYDRGGEWSGQAFMCSRDKEFTIKGTDNCLARGYDRTGFYEVDTGEQR 135
Query: 128 NWTVQLTEPAQD 139
+WTVQLTE +
Sbjct: 136 SWTVQLTEAGEQ 147
>gi|90425456|ref|YP_533826.1| hypothetical protein RPC_3981 [Rhodopseudomonas palustris BisB18]
gi|90107470|gb|ABD89507.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
BisB18]
Length = 197
Score = 203 bits (516), Expect = 7e-51, Method: Composition-based stats.
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
+ + + + + A FR+CN T + +G+A+GY +G W TEGWW + +CET
Sbjct: 19 ALMPAWALAVLCLSFTPAAADFRLCNNTASRVGIALGYKDAEG-WTTEGWWNVSSRSCET 77
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+++G L +R+YY+YA W+G MC EF I NC RG+ R GF E DT
Sbjct: 78 LLRGTLVARFYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTDNCLARGFDRTGFFEVDT 137
Query: 124 GQHENWTVQLTEPAQD 139
G+ WTVQLTE ++
Sbjct: 138 GEQRAWTVQLTESSEQ 153
>gi|146338282|ref|YP_001203330.1| putative signal peptide [Bradyrhizobium sp. ORS278]
gi|146191088|emb|CAL75093.1| conserved hypothetical protein; putative signal peptide
[Bradyrhizobium sp. ORS278]
Length = 197
Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats.
Identities = 59/130 (45%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
S+ + A FR+CN T + +G+A+GY +G W TEGWW + +CET++KG L +RYY
Sbjct: 30 CLSSSPAAADFRLCNNTSSRVGIALGYKDAEG-WTTEGWWNVSSRSCETLLKGTLVARYY 88
Query: 75 YLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
Y+YA W+G MC EF I NC RG+ R GF E DTG WTVQLT
Sbjct: 89 YIYALDYDRGGEWSGQAFMCSRDKEFTIKGTDNCLARGFDRTGFFEVDTGDQRAWTVQLT 148
Query: 135 E----PAQDR 140
E PAQ R
Sbjct: 149 EANEQPAQQR 158
>gi|92116778|ref|YP_576507.1| hypothetical protein Nham_1219 [Nitrobacter hamburgensis X14]
gi|91799672|gb|ABE62047.1| protein of unknown function DUF1036 [Nitrobacter hamburgensis X14]
Length = 194
Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats.
Identities = 56/135 (41%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
L + S + A FR+CN T +G+A+GY +G W TEGWW + CET
Sbjct: 20 GLLPALGILVVCLWSAPAAADFRLCNNTPGRVGIALGYKDAEG-WTTEGWWNVSSRACET 78
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+++G L +RYYY+YA H W+G MC EF I NC RG+ R GF E DT
Sbjct: 79 LLRGTLIARYYYIYALDYDHGGEWSGQAFMCSRDKEFTIRGTDNCLARGFDRTGFFEIDT 138
Query: 124 GQHENWTVQLTEPAQ 138
G WTVQLTE +
Sbjct: 139 GDQRAWTVQLTESGE 153
>gi|15891189|ref|NP_356861.1| hypothetical protein Atu3761 [Agrobacterium tumefaciens str. C58]
gi|15159545|gb|AAK89646.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 179
Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats.
Identities = 64/137 (46%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+ R F F + A FRVCN T+NL+GVA+GY A G W++EGWWQ+P +T
Sbjct: 37 IARLFSAAALFLTPFIIVESAHADFRVCNSTQNLVGVAIGYRAQDG-WVSEGWWQVPSST 95
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C T+++G L SRYYYLYAE +H W G+V MCV ++EF I + +C+ R + R+GF E
Sbjct: 96 CATLIEGELQSRYYYLYAEDAAHGGRWTGDVNMCVAENEFKINGVDDCFARSFQRMGFKE 155
Query: 121 YDTGQHENWTVQLTEPA 137
YDTG+ +W VQL++
Sbjct: 156 YDTGRQGSWMVQLSDTP 172
>gi|85716082|ref|ZP_01047058.1| hypothetical protein NB311A_10900 [Nitrobacter sp. Nb-311A]
gi|85697081|gb|EAQ34963.1| hypothetical protein NB311A_10900 [Nitrobacter sp. Nb-311A]
Length = 175
Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/134 (41%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
L + S + A FR+CN T + +G+A+GY G W TEGWW + + CET+
Sbjct: 1 MLPALGILVVCLWSAPAAADFRLCNNTSSRVGIALGYKDADG-WTTEGWWNVSSHACETL 59
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L +RYYY+YA H W+G MC EF I NC RG+ R GF E DTG
Sbjct: 60 LRGTLIARYYYIYALDYDHGGEWSGQAFMCSRDKEFTIKGTDNCLARGFDRTGFFEIDTG 119
Query: 125 QHENWTVQLTEPAQ 138
WTVQLTE +
Sbjct: 120 DQRAWTVQLTESGE 133
>gi|254719747|ref|ZP_05181558.1| hypothetical protein Bru83_09418 [Brucella sp. 83/13]
gi|265984763|ref|ZP_06097498.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839442|ref|ZP_07472250.1| Hypothetical protein BROD_2305 [Brucella sp. NF 2653]
gi|264663355|gb|EEZ33616.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405387|gb|EFM61658.1| Hypothetical protein BROD_2305 [Brucella sp. NF 2653]
Length = 153
Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats.
Identities = 66/135 (48%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+ + GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++
Sbjct: 5 LSLALFAGVLMGALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSS 63
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C+T+++G L SRYYYLYAE W G V MCV + EF I +++C+ RG+ R GF E
Sbjct: 64 CKTLIEGPLASRYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQE 123
Query: 121 YDTGQHENWTVQLTE 135
YDTG+ +W VQLT+
Sbjct: 124 YDTGEQSSWMVQLTD 138
>gi|328542484|ref|YP_004302593.1| integral membrane protein [polymorphum gilvum SL003B-26A1]
gi|326412231|gb|ADZ69294.1| Predicted integral membrane protein [Polymorphum gilvum
SL003B-26A1]
Length = 156
Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats.
Identities = 61/124 (49%), Positives = 77/124 (62%), Gaps = 1/124 (0%)
Query: 16 FCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYY 75
+ + A R+CN T++ +GVA+GY K W+TEGWW + N+CET+V GAL SRYYY
Sbjct: 29 VFVDPARADLRLCNKTESQVGVAIGYKD-KTDWVTEGWWNLSPNSCETLVPGALVSRYYY 87
Query: 76 LYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
+YA W G MC + EF I I++C RGY R GF E DTG+ NWTVQLTE
Sbjct: 88 IYAVDYDQFGEWGGRAYMCTREKEFTIRGIEDCVARGYERTGFFEIDTGEQSNWTVQLTE 147
Query: 136 PAQD 139
P Q
Sbjct: 148 PVQQ 151
>gi|254714604|ref|ZP_05176415.1| hypothetical protein BcetM6_14957 [Brucella ceti M644/93/1]
gi|254717502|ref|ZP_05179313.1| hypothetical protein BcetM_14086 [Brucella ceti M13/05/1]
gi|261219334|ref|ZP_05933615.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261322395|ref|ZP_05961592.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260924423|gb|EEX90991.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261295085|gb|EEX98581.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 153
Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats.
Identities = 66/135 (48%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+ + GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++
Sbjct: 5 LSLALFAGVLTGALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSS 63
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C+T+++G L SRYYYLYAE W G V MCV + EF I +++C+ RG+ R GF E
Sbjct: 64 CKTLIEGPLTSRYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQE 123
Query: 121 YDTGQHENWTVQLTE 135
YDTG+ +W VQLT+
Sbjct: 124 YDTGEQSSWMVQLTD 138
>gi|222149709|ref|YP_002550666.1| hypothetical protein Avi_3691 [Agrobacterium vitis S4]
gi|221736691|gb|ACM37654.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 204
Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats.
Identities = 64/138 (46%), Positives = 93/138 (67%), Gaps = 2/138 (1%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
+ F + + + + A FRVCNG+ NL+GVA+GY A +G W++EGWWQ+P +TC T
Sbjct: 65 GLFLTIVFSPIAYAA-PAQADFRVCNGSANLVGVAIGYRAAEG-WISEGWWQVPASTCAT 122
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+++G L SRYYYLYAE + W GNV MCV ++EF IV + +C+ RGY ++GF EYDT
Sbjct: 123 LIEGELKSRYYYLYAEDAARGGRWTGNVNMCVAENEFKIVGVGDCFKRGYQQMGFKEYDT 182
Query: 124 GQHENWTVQLTEPAQDRR 141
G+ +W VQL++ +
Sbjct: 183 GRQGSWMVQLSDTPGTQE 200
>gi|254694405|ref|ZP_05156233.1| hypothetical protein Babob3T_07052 [Brucella abortus bv. 3 str.
Tulya]
gi|261214716|ref|ZP_05928997.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260916323|gb|EEX83184.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 153
Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats.
Identities = 66/135 (48%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+ + GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++
Sbjct: 5 LSLALFASVLTGALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSS 63
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C+T+++G L SRYYYLYAE W G V MCV + EF I +++C+ RG+ R GF E
Sbjct: 64 CKTLIEGPLTSRYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQE 123
Query: 121 YDTGQHENWTVQLTE 135
YDTG+ +W VQLT+
Sbjct: 124 YDTGEQSSWMVQLTD 138
>gi|307944481|ref|ZP_07659821.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307772230|gb|EFO31451.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 173
Score = 200 bits (508), Expect = 7e-50, Method: Composition-based stats.
Identities = 62/134 (46%), Positives = 83/134 (61%), Gaps = 1/134 (0%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVV 65
+ + A++ ++ ++A R+CN T++ +GVA+GY K GW+TEGWW I N+CET+
Sbjct: 36 VTSLTWAALLLGNSTAWADLRLCNKTESKVGVAIGYKD-KAGWVTEGWWNISSNSCETLF 94
Query: 66 KGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQ 125
GAL SRYYY+YA W G MC EF I I++C RGY R GF E DTG+
Sbjct: 95 PGALVSRYYYIYAVDYDQLGEWGGRAFMCTRDKEFTIRGIEDCVARGYERTGFFEIDTGE 154
Query: 126 HENWTVQLTEPAQD 139
+WTVQLTEP Q
Sbjct: 155 QSSWTVQLTEPVQQ 168
>gi|23502606|ref|NP_698733.1| hypothetical protein BR1749 [Brucella suis 1330]
gi|62290620|ref|YP_222413.1| hypothetical protein BruAb1_1734 [Brucella abortus bv. 1 str.
9-941]
gi|82700536|ref|YP_415110.1| hypothetical protein BAB1_1762 [Brucella melitensis biovar Abortus
2308]
gi|148559464|ref|YP_001259598.1| hypothetical protein BOV_1689 [Brucella ovis ATCC 25840]
gi|161619675|ref|YP_001593562.1| hypothetical protein BCAN_A1787 [Brucella canis ATCC 23365]
gi|163845327|ref|YP_001622982.1| hypothetical protein BSUIS_B1225 [Brucella suis ATCC 23445]
gi|189024835|ref|YP_001935603.1| hypothetical protein BAbS19_I16470 [Brucella abortus S19]
gi|225628315|ref|ZP_03786349.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225853201|ref|YP_002733434.1| hypothetical protein BMEA_A1801 [Brucella melitensis ATCC 23457]
gi|237816122|ref|ZP_04595118.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254689913|ref|ZP_05153167.1| hypothetical protein Babob68_07049 [Brucella abortus bv. 6 str.
870]
gi|254700406|ref|ZP_05162234.1| hypothetical protein Bsuib55_06059 [Brucella suis bv. 5 str. 513]
gi|254703524|ref|ZP_05165352.1| hypothetical protein Bsuib36_06294 [Brucella suis bv. 3 str. 686]
gi|254708387|ref|ZP_05170215.1| hypothetical protein BpinM_15900 [Brucella pinnipedialis
M163/99/10]
gi|254708759|ref|ZP_05170570.1| hypothetical protein BpinB_00581 [Brucella pinnipedialis B2/94]
gi|254730947|ref|ZP_05189525.1| hypothetical protein Babob42_07077 [Brucella abortus bv. 4 str.
292]
gi|256030285|ref|ZP_05443899.1| hypothetical protein BpinM2_06501 [Brucella pinnipedialis
M292/94/1]
gi|256045355|ref|ZP_05448249.1| hypothetical protein Bmelb1R_12747 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256061783|ref|ZP_05451918.1| hypothetical protein Bneo5_15678 [Brucella neotomae 5K33]
gi|256114319|ref|ZP_05455057.1| hypothetical protein Bmelb3E_15965 [Brucella melitensis bv. 3 str.
Ether]
gi|256160458|ref|ZP_05458147.1| hypothetical protein BcetM4_15749 [Brucella ceti M490/95/1]
gi|256255665|ref|ZP_05461201.1| hypothetical protein BcetB_15573 [Brucella ceti B1/94]
gi|256258167|ref|ZP_05463703.1| hypothetical protein Babob9C_12651 [Brucella abortus bv. 9 str.
C68]
gi|256263307|ref|ZP_05465839.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|256370156|ref|YP_003107667.1| hypothetical protein BMI_I1768 [Brucella microti CCM 4915]
gi|260167959|ref|ZP_05754770.1| hypothetical protein BruF5_06257 [Brucella sp. F5/99]
gi|260547140|ref|ZP_05822878.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260565753|ref|ZP_05836236.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260568829|ref|ZP_05839297.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260755446|ref|ZP_05867794.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260758668|ref|ZP_05871016.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260884462|ref|ZP_05896076.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261222869|ref|ZP_05937150.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261315887|ref|ZP_05955084.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316251|ref|ZP_05955448.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261325786|ref|ZP_05964983.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261750902|ref|ZP_05994611.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261754155|ref|ZP_05997864.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261757399|ref|ZP_06001108.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265987314|ref|ZP_06099871.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265991779|ref|ZP_06104336.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995619|ref|ZP_06108176.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265998828|ref|ZP_06111385.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294850996|ref|ZP_06791672.1| hypothetical protein BAZG_03129 [Brucella sp. NVSL 07-0026]
gi|297249015|ref|ZP_06932723.1| hypothetical protein BAYG_03057 [Brucella abortus bv. 5 str. B3196]
gi|23348610|gb|AAN30648.1| conserved hypothetical protein [Brucella suis 1330]
gi|62196752|gb|AAX75052.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616637|emb|CAJ11718.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|148370721|gb|ABQ60700.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|161336486|gb|ABX62791.1| protein of unknown function DUF1036 [Brucella canis ATCC 23365]
gi|163676050|gb|ABY40160.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189020407|gb|ACD73129.1| hypothetical protein BAbS19_I16470 [Brucella abortus S19]
gi|225616161|gb|EEH13209.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225641566|gb|ACO01480.1| protein of unknown function DUF1036 [Brucella melitensis ATCC
23457]
gi|237788785|gb|EEP62997.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|256000319|gb|ACU48718.1| hypothetical protein BMI_I1768 [Brucella microti CCM 4915]
gi|260095505|gb|EEW79383.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260151126|gb|EEW86221.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260154213|gb|EEW89295.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260668986|gb|EEX55926.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260675554|gb|EEX62375.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873990|gb|EEX81059.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260921453|gb|EEX88106.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261295474|gb|EEX98970.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301766|gb|EEY05263.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261304913|gb|EEY08410.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261737383|gb|EEY25379.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261740655|gb|EEY28581.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261743908|gb|EEY31834.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262553517|gb|EEZ09286.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262766903|gb|EEZ12521.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263002735|gb|EEZ15138.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093278|gb|EEZ17375.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|264659511|gb|EEZ29772.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|294821639|gb|EFG38635.1| hypothetical protein BAZG_03129 [Brucella sp. NVSL 07-0026]
gi|297174148|gb|EFH33505.1| hypothetical protein BAYG_03057 [Brucella abortus bv. 5 str. B3196]
Length = 153
Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats.
Identities = 66/135 (48%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+ + GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++
Sbjct: 5 LSLALFAGVLTGALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSS 63
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C+T+++G L SRYYYLYAE W G V MCV + EF I +++C+ RG+ R GF E
Sbjct: 64 CKTLIEGPLTSRYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQE 123
Query: 121 YDTGQHENWTVQLTE 135
YDTG+ +W VQLT+
Sbjct: 124 YDTGEQSSWMVQLTD 138
>gi|332716494|ref|YP_004443960.1| hypothetical protein AGROH133_12128 [Agrobacterium sp. H13-3]
gi|325063179|gb|ADY66869.1| hypothetical protein AGROH133_12128 [Agrobacterium sp. H13-3]
Length = 160
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 65/137 (47%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+ R F F + A FRVCN T+NL+GVA+GY A G W++EGWWQ+P +T
Sbjct: 18 LARLFSAAALFLTPFVFVEAAHADFRVCNSTQNLVGVAIGYRAQDG-WVSEGWWQVPSST 76
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C T+++G L SRYYYLYAE +H W G+V MCV ++EF I + +CY R + R+GF E
Sbjct: 77 CATLIEGELQSRYYYLYAEDAAHGGRWTGDVNMCVAENEFKIAGVDDCYARSFQRMGFKE 136
Query: 121 YDTGQHENWTVQLTEPA 137
YDTG+ +W VQL++
Sbjct: 137 YDTGRQGSWMVQLSDTP 153
>gi|163852165|ref|YP_001640208.1| hypothetical protein Mext_2746 [Methylobacterium extorquens PA1]
gi|1907335|gb|AAB66497.1| orf4; putative [Methylobacterium extorquens AM1]
gi|163663770|gb|ABY31137.1| protein of unknown function DUF1036 [Methylobacterium extorquens
PA1]
Length = 180
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 55/134 (41%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVV 65
++ C GA + A R+CN T + +GV +GY +G W+TEGWW + CET++
Sbjct: 43 VLGLCLGASALLPLPASADLRLCNQTASKVGVTLGYRDAQG-WVTEGWWDLKPRNCETLL 101
Query: 66 KGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQ 125
KG+L +++YYLYA S W+G MC F I +++C RG+ R GF E DTGQ
Sbjct: 102 KGSLAAQFYYLYAVDYSRGGEWSGRAMMCTRDTAFTIRGVEDCLARGFDRNGFIEVDTGQ 161
Query: 126 HENWTVQLTEPAQD 139
NWT+QL++P Q
Sbjct: 162 QRNWTIQLSDPGQP 175
>gi|306844739|ref|ZP_07477324.1| Hypothetical protein BIBO1_1420 [Brucella sp. BO1]
gi|306274911|gb|EFM56681.1| Hypothetical protein BIBO1_1420 [Brucella sp. BO1]
Length = 153
Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats.
Identities = 66/135 (48%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+ + GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++
Sbjct: 5 LSLALFAGVLTGALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSS 63
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C+T+++G L SRYYYLYAE W G V MCV + EF I +++C+ RG+ R GF E
Sbjct: 64 CKTLIEGPLTSRYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQE 123
Query: 121 YDTGQHENWTVQLTE 135
YDTG+ +W VQLT+
Sbjct: 124 YDTGEQSSWMVQLTD 138
>gi|218530923|ref|YP_002421739.1| hypothetical protein Mchl_2973 [Methylobacterium chloromethanicum
CM4]
gi|240139497|ref|YP_002963972.1| hypothetical protein MexAM1_META1p2943 [Methylobacterium extorquens
AM1]
gi|254561911|ref|YP_003069006.1| hypothetical protein METDI3512 [Methylobacterium extorquens DM4]
gi|218523226|gb|ACK83811.1| protein of unknown function DUF1036 [Methylobacterium
chloromethanicum CM4]
gi|240009469|gb|ACS40695.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
gi|254269189|emb|CAX25155.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 151
Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats.
Identities = 55/134 (41%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVV 65
++ C GA + A R+CN T + +GV +GY +G W+TEGWW + CET++
Sbjct: 14 VLGLCLGASALLPLPASADLRLCNQTASKVGVTLGYRDAQG-WVTEGWWDLKPRNCETLL 72
Query: 66 KGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQ 125
KG+L +++YYLYA S W+G MC F I +++C RG+ R GF E DTGQ
Sbjct: 73 KGSLAAQFYYLYAVDYSRGGEWSGRAMMCTRDTAFTIRGVEDCLARGFDRNGFIEVDTGQ 132
Query: 126 HENWTVQLTEPAQD 139
NWT+QL++P Q
Sbjct: 133 QRNWTIQLSDPGQP 146
>gi|316935706|ref|YP_004110688.1| hypothetical protein Rpdx1_4404 [Rhodopseudomonas palustris DX-1]
gi|315603420|gb|ADU45955.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
DX-1]
Length = 198
Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats.
Identities = 58/132 (43%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Query: 8 CFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG 67
GA+I + A FR+CN T + +G+A+GY V G W TEGWW + +CET+++G
Sbjct: 27 ALAIGALICGHAPAAADFRLCNNTSSRVGIALGYKDVDG-WTTEGWWNVSSRSCETLLRG 85
Query: 68 ALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHE 127
AL +RYYY+YA W+G MC EF I +NC RG+ R GF E DTG+
Sbjct: 86 ALVARYYYIYALDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDTGEQR 145
Query: 128 NWTVQLTEPAQD 139
WTVQLTE +
Sbjct: 146 AWTVQLTESNEQ 157
>gi|218682191|ref|ZP_03529792.1| hypothetical protein RetlC8_25245 [Rhizobium etli CIAT 894]
Length = 158
Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats.
Identities = 69/141 (48%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
++R L F ++ + A FRVCNGT+NL+GVA+GY A G WMTEGWWQ+P T
Sbjct: 16 LVRLALFALAAIMPFFIADAARADFRVCNGTQNLVGVAIGYRAKDG-WMTEGWWQVPATT 74
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C T+++G L SRYYYLYAE + W G+VQMCV ++EF I +++CY RGY ++GF E
Sbjct: 75 CATLIEGELQSRYYYLYAEDAARGGRWTGDVQMCVAENEFKITGVQDCYARGYQKMGFKE 134
Query: 121 YDTGQHENWTVQLTEPAQDRR 141
YDTG+ +W VQL++ +
Sbjct: 135 YDTGRQGSWMVQLSDTPGTQE 155
>gi|190893368|ref|YP_001979910.1| hypothetical protein RHECIAT_CH0003794 [Rhizobium etli CIAT 652]
gi|190698647|gb|ACE92732.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 161
Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 68/141 (48%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
++R L F ++ + A FRVCNGT+NL+GVA+GY A G W+TEGWWQ+P T
Sbjct: 19 LVRLALFALAAFMPFFIADAARADFRVCNGTQNLVGVAIGYRAKDG-WVTEGWWQVPATT 77
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C T+++G L SRYYYLYAE + W G+VQMCV ++EF I +++CY RGY ++GF E
Sbjct: 78 CATLIEGELQSRYYYLYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQKMGFKE 137
Query: 121 YDTGQHENWTVQLTEPAQDRR 141
YDTG+ +W VQL++ +
Sbjct: 138 YDTGRQGSWMVQLSDTPGTQE 158
>gi|158422068|ref|YP_001523360.1| hypothetical protein AZC_0444 [Azorhizobium caulinodans ORS 571]
gi|158328957|dbj|BAF86442.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 194
Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 54/124 (43%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
+ + + A FR+CN T++ +GVA+GY + W TEGWW I N+CET+++G L +R+Y
Sbjct: 49 VVLPDPAAADFRLCNRTQSRVGVAIGYKEGEN-WATEGWWNIAANSCETLLRGDLVARFY 107
Query: 75 YLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
YLYA W+G MC EF I +++C RG+ R GF E DT + + WTVQLT
Sbjct: 108 YLYAVDYDQGGEWSGKAFMCTRDKEFTIRGVEDCLARGFDRTGFLEVDTKEQKGWTVQLT 167
Query: 135 EPAQ 138
E Q
Sbjct: 168 ESNQ 171
>gi|319899392|ref|YP_004159489.1| hypothetical protein BARCL_1247 [Bartonella clarridgeiae 73]
gi|319403360|emb|CBI76919.1| conserved exported protein of unknown function [Bartonella
clarridgeiae 73]
Length = 200
Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats.
Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Query: 1 MLRSFLICFCFGAMIFCS-NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN 59
ML+ I F ++F + + A FRVCN T+ +G+A+GY V W++EGWW +P
Sbjct: 1 MLKELRILFLNVLILFSAFEYAKADFRVCNTTQESVGIAIGYRTVSN-WVSEGWWIVPTT 59
Query: 60 TCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFT 119
C+T++ G L SR+YYLY E G V MCV +F I I NC+ RG+ + F
Sbjct: 60 ECKTLIDGPLASRFYYLYVENTRKKGSGVGTVMMCVRDSQFTIEGIHNCFVRGFQKAKFE 119
Query: 120 EYDTGQHENWTVQLTE 135
E DTG NW VQLT+
Sbjct: 120 EIDTGDQTNWMVQLTD 135
>gi|170746577|ref|YP_001752837.1| hypothetical protein Mrad2831_0127 [Methylobacterium radiotolerans
JCM 2831]
gi|170653099|gb|ACB22154.1| protein of unknown function DUF1036 [Methylobacterium radiotolerans
JCM 2831]
Length = 160
Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats.
Identities = 52/130 (40%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 10 CFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGAL 69
G + ++ + A R+CN T + +G+++GY +G W+TEGWW + CET++KGAL
Sbjct: 26 VLGLALLGASPARADLRLCNQTASKVGISLGYRDPQG-WVTEGWWDLAPKACETLLKGAL 84
Query: 70 HSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENW 129
+R+YY++A + W+G MC EF I I++C RGY R GF E DTG+ ++W
Sbjct: 85 AARFYYVFAVDYTRGGEWSGRSLMCTRDSEFTIRGIEDCLARGYDRNGFFEVDTGEQKSW 144
Query: 130 TVQLTEPAQD 139
T+QLT+P +
Sbjct: 145 TIQLTDPNRA 154
>gi|227823363|ref|YP_002827335.1| hypothetical protein NGR_c28360 [Sinorhizobium fredii NGR234]
gi|227342364|gb|ACP26582.1| hypothetical protein NGR_c28360 [Sinorhizobium fredii NGR234]
Length = 158
Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats.
Identities = 63/137 (45%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
L S + A FRVCNGT+ L+GVA+GY A +G W+TEGWWQ+P TC T+
Sbjct: 20 LLYSLVVSGAFLISGEARADFRVCNGTQQLVGVAIGYRAKEG-WVTEGWWQVPATTCATL 78
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SRYYYLYAE + W G++ MCV ++EF I +++C+ RG+ R+GF EYDTG
Sbjct: 79 IEGELQSRYYYLYAEDAAKGGRWTGDINMCVAENEFKIAGVQDCFARGFQRMGFKEYDTG 138
Query: 125 QHENWTVQLTEPAQDRR 141
+ +W VQL++ +
Sbjct: 139 RQGSWMVQLSDTPGTQE 155
>gi|110635584|ref|YP_675792.1| hypothetical protein Meso_3255 [Mesorhizobium sp. BNC1]
gi|110286568|gb|ABG64627.1| protein of unknown function DUF1036 [Chelativorans sp. BNC1]
Length = 158
Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats.
Identities = 63/131 (48%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
++ G ++ + A FRVCN T+NL+GVA+GY A + GW++EGWW I ++CET+
Sbjct: 14 LVLAAAAGCLLMGGKPASADFRVCNTTQNLVGVAIGYRA-RTGWISEGWWHIKPSSCETL 72
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
+ L SRYYYLYAE + W G +QMCV EF I +C+ RG+ R GF EYDTG
Sbjct: 73 IDAPLESRYYYLYAEDATRGGRWQGPIQMCVSDTEFKITGANDCFKRGFQRAGFEEYDTG 132
Query: 125 QHENWTVQLTE 135
ENW VQLT+
Sbjct: 133 DQENWMVQLTD 143
>gi|319781082|ref|YP_004140558.1| hypothetical protein Mesci_1348 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166970|gb|ADV10508.1| protein of unknown function DUF1036 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 162
Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats.
Identities = 63/136 (46%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Query: 2 LRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC 61
+ + AM+ S + A FRVCN T+NL+GV +GY A K GW+TEGWW I G++C
Sbjct: 15 MPLLTLAIGLSAMVVAS-PARADFRVCNATQNLVGVGIGYRA-KAGWITEGWWHIEGSSC 72
Query: 62 ETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEY 121
+T+++G L SR+YYLYAE W G + MCV + EF I + +C RG+ R GF EY
Sbjct: 73 KTLIEGPLSSRFYYLYAEDAERGGRWDGPINMCVAEKEFKIAGVTDCVARGFQRAGFQEY 132
Query: 122 DTGQHENWTVQLTEPA 137
DTG+ +W VQLT+ +
Sbjct: 133 DTGEQASWMVQLTDES 148
>gi|260461475|ref|ZP_05809722.1| protein of unknown function DUF1036 [Mesorhizobium opportunistum
WSM2075]
gi|259032545|gb|EEW33809.1| protein of unknown function DUF1036 [Mesorhizobium opportunistum
WSM2075]
Length = 162
Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats.
Identities = 63/134 (47%), Positives = 86/134 (64%), Gaps = 2/134 (1%)
Query: 2 LRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC 61
+ + AM+ S + A FRVCN T+NL+GV +GY A K GW+TEGWW I G++C
Sbjct: 15 MPLLTLTVGMSAMVMAS-PARADFRVCNATQNLVGVGIGYRA-KAGWITEGWWHIEGSSC 72
Query: 62 ETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEY 121
+T+++G L SR+YYLYAE W G + MCV + EF I + +C RG+ R GF EY
Sbjct: 73 KTLIEGPLSSRFYYLYAEDAERGGRWDGPINMCVAEKEFKIAGVNDCVARGFQRAGFQEY 132
Query: 122 DTGQHENWTVQLTE 135
DTG+ +W VQLT+
Sbjct: 133 DTGEQASWMVQLTD 146
>gi|150397875|ref|YP_001328342.1| hypothetical protein Smed_2677 [Sinorhizobium medicae WSM419]
gi|150029390|gb|ABR61507.1| protein of unknown function DUF1036 [Sinorhizobium medicae WSM419]
Length = 145
Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats.
Identities = 64/137 (46%), Positives = 90/137 (65%), Gaps = 1/137 (0%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
L + + A FRVCNGT+ L+GVA+GY A +G W+TEGWWQ+P TC T+
Sbjct: 7 LLFSLAVSVPFLSAGAARADFRVCNGTQTLVGVAIGYRAKEG-WVTEGWWQVPATTCATL 65
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SRYYYLYAE + W G+V MCV ++EF IV +++C+ RG+ R+GF EYDTG
Sbjct: 66 IEGELQSRYYYLYAEDAAKGGRWTGDVNMCVAENEFKIVGVQDCFARGFQRMGFKEYDTG 125
Query: 125 QHENWTVQLTEPAQDRR 141
+ +W VQL++ +
Sbjct: 126 RQGSWMVQLSDTPGTQE 142
>gi|148258076|ref|YP_001242661.1| hypothetical protein BBta_6868 [Bradyrhizobium sp. BTAi1]
gi|146410249|gb|ABQ38755.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 195
Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats.
Identities = 59/127 (46%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Query: 18 SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLY 77
S + A FR+CN T + +G+A+GY +G W TEGWW + +CET++KG L +RYYY+Y
Sbjct: 33 STPAAADFRLCNNTSSRVGIALGYKDAEG-WTTEGWWNVSSRSCETLLKGTLVARYYYIY 91
Query: 78 AEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE-- 135
A W+G MC EF I +NC RG+ R GF E DTG WTVQLTE
Sbjct: 92 ALDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDTGDQRAWTVQLTEAN 151
Query: 136 --PAQDR 140
PAQ R
Sbjct: 152 EQPAQQR 158
>gi|13473276|ref|NP_104843.1| hypothetical protein mll3821 [Mesorhizobium loti MAFF303099]
gi|14024024|dbj|BAB50629.1| mll3821 [Mesorhizobium loti MAFF303099]
Length = 184
Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats.
Identities = 63/131 (48%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
FL + I ++ + A FRVCN T+NL+GV +GY A K GW+TEGWW I G++C+T+
Sbjct: 39 FLTVAVGLSAIVMASPARADFRVCNATQNLVGVGIGYRA-KAGWITEGWWHIEGSSCKTL 97
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SR+YYLYAE W G + MCV + EF I + +C RG+ R GF EYDTG
Sbjct: 98 IEGPLSSRFYYLYAEDAERGGRWDGPINMCVAEKEFKIAGVNDCVARGFQRAGFQEYDTG 157
Query: 125 QHENWTVQLTE 135
+ +W VQLT+
Sbjct: 158 EQASWMVQLTD 168
>gi|115526104|ref|YP_783015.1| hypothetical protein RPE_4109 [Rhodopseudomonas palustris BisA53]
gi|115520051|gb|ABJ08035.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
BisA53]
Length = 196
Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats.
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 19 NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYA 78
+ + A FR+CN T + +G+A+GY G W TEGWW + +CET+++G L +R+YY+YA
Sbjct: 34 SAAAADFRLCNNTSSRVGIALGYKDADG-WTTEGWWNVSSRSCETLLRGTLVARFYYIYA 92
Query: 79 EGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
W+G MC EF I NC RG+ R GF E DTG+ WTVQLTE ++
Sbjct: 93 LDYDRGGEWSGQAFMCSRDKEFTIKGTDNCLARGFDRTGFFEVDTGEQRAWTVQLTESSE 152
Query: 139 D 139
Sbjct: 153 Q 153
>gi|15966543|ref|NP_386896.1| hypothetical protein SMc04006 [Sinorhizobium meliloti 1021]
gi|307300420|ref|ZP_07580200.1| protein of unknown function DUF1036 [Sinorhizobium meliloti BL225C]
gi|307318285|ref|ZP_07597720.1| protein of unknown function DUF1036 [Sinorhizobium meliloti AK83]
gi|15075814|emb|CAC47369.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306895967|gb|EFN26718.1| protein of unknown function DUF1036 [Sinorhizobium meliloti AK83]
gi|306904586|gb|EFN35170.1| protein of unknown function DUF1036 [Sinorhizobium meliloti BL225C]
Length = 145
Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats.
Identities = 65/137 (47%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
L A + + A FRVCNGT+ L+GVA+GY A +G W+TEGWWQ+P TC T+
Sbjct: 7 LLFSLAISASFLSAGDARADFRVCNGTQTLVGVAIGYRAKEG-WVTEGWWQVPATTCATL 65
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SRYYYLYAE + W G+V MCV ++EF IV +++C+ RG+ R+GF EYDTG
Sbjct: 66 IEGELQSRYYYLYAEDAAKGGRWTGDVNMCVAENEFKIVGVQDCFARGFQRMGFKEYDTG 125
Query: 125 QHENWTVQLTEPAQDRR 141
+ +W VQL++ +
Sbjct: 126 RQGSWMVQLSDTPGTQE 142
>gi|209550866|ref|YP_002282783.1| hypothetical protein Rleg2_3290 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536622|gb|ACI56557.1| protein of unknown function DUF1036 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 157
Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats.
Identities = 68/141 (48%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
++R L F ++ + A FRVCNGT+NL+GVA+GY A G WMTEGWWQ+P T
Sbjct: 15 LVRLALFALAAFMPFFIADAARADFRVCNGTQNLVGVAIGYRAKDG-WMTEGWWQVPATT 73
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C +++G L SRYYYLYAE + W G+VQMCV ++EF I +++CY RGY ++GF E
Sbjct: 74 CAVLIEGELQSRYYYLYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQKMGFKE 133
Query: 121 YDTGQHENWTVQLTEPAQDRR 141
YDTG+ +W VQL++ +
Sbjct: 134 YDTGRQGSWMVQLSDTPGTQE 154
>gi|319406271|emb|CBI79908.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3]
Length = 184
Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats.
Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Query: 1 MLRSFLICFCFGAMIFCS-NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN 59
ML+ I F +F + + A FRVCN T+ +G+A+GY V W++EGWW +P
Sbjct: 1 MLKKLRILFLNILFLFSAFEWAKADFRVCNTTQEAVGIAIGYRTVSN-WVSEGWWIVPTT 59
Query: 60 TCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFT 119
C+T++ G L SR+YYLY E G V MCV +F I I NC+ RG+ RV F
Sbjct: 60 ECKTLIDGPLESRFYYLYVENTRKKGSGIGKVMMCVQDSQFTIEGIHNCFVRGFQRVEFE 119
Query: 120 EYDTGQHENWTVQLTE 135
E DTG NW VQLT+
Sbjct: 120 EIDTGDQTNWMVQLTD 135
>gi|118588390|ref|ZP_01545799.1| hypothetical protein SIAM614_23952 [Stappia aggregata IAM 12614]
gi|118439096|gb|EAV45728.1| hypothetical protein SIAM614_23952 [Stappia aggregata IAM 12614]
Length = 145
Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats.
Identities = 61/136 (44%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
+F S+ + A R+CN T + +GVA+GY K W+TEGWW + N+CET
Sbjct: 6 AFAAFLAVLFFSASSDEARADLRLCNKTDSQVGVAIGYKD-KTDWVTEGWWNLASNSCET 64
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+V GAL SRYYY+YA W G MC + EF I I++C RG+ R GF E DT
Sbjct: 65 LVPGALVSRYYYIYAVDYDQFGEWGGRAFMCTREKEFTIRGIEDCVARGFERTGFFEIDT 124
Query: 124 GQHENWTVQLTEPAQD 139
G+ +WTVQLTEP Q
Sbjct: 125 GEQSSWTVQLTEPVQQ 140
>gi|319404784|emb|CBI78385.1| hypothetical protein BARRO_130029 [Bartonella rochalimae ATCC
BAA-1498]
Length = 192
Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats.
Identities = 59/136 (43%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
Query: 1 MLRSFLICFCFGAMIFCS-NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN 59
ML+ F + F F + + A FRVCN T+ +G+A+GY V W+TEGWW +P
Sbjct: 1 MLKEFRVLFFNILFFFSAFECAKADFRVCNTTQESVGIAIGYRTVSN-WVTEGWWIVPTT 59
Query: 60 TCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFT 119
C+T++ G L SR+YYLY E G V MCV +F I I NC+ RG+ R F
Sbjct: 60 ECKTLIDGPLASRFYYLYFENTRKKGSGVGKVMMCVQDSQFTIEGIHNCFVRGFQRAEFE 119
Query: 120 EYDTGQHENWTVQLTE 135
E DTG NW VQLT+
Sbjct: 120 EIDTGDQTNWMVQLTD 135
>gi|17986574|ref|NP_539208.1| hypothetical protein BMEI0291 [Brucella melitensis bv. 1 str. 16M]
gi|306841467|ref|ZP_07474167.1| Hypothetical protein BIBO2_1253 [Brucella sp. BO2]
gi|17982184|gb|AAL51472.1| hypothetical protein BMEI0291 [Brucella melitensis bv. 1 str. 16M]
gi|306288431|gb|EFM59787.1| Hypothetical protein BIBO2_1253 [Brucella sp. BO2]
gi|326409760|gb|ADZ66825.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539474|gb|ADZ87689.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 145
Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats.
Identities = 66/131 (50%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++C+T+
Sbjct: 1 MFAGVLTGALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSSCKTL 59
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SRYYYLYAE W G V MCV + EF I +++C+ RG+ R GF EYDTG
Sbjct: 60 IEGPLTSRYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQEYDTG 119
Query: 125 QHENWTVQLTE 135
+ +W VQLT+
Sbjct: 120 EQSSWMVQLTD 130
>gi|254501074|ref|ZP_05113225.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222437145|gb|EEE43824.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 147
Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats.
Identities = 64/143 (44%), Positives = 85/143 (59%), Gaps = 6/143 (4%)
Query: 2 LRSFLICFCFGAMIFCSNV-----SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQI 56
+R+ + FC ++ F N + A R+CN T + +GVA+GY K W+TEGWW +
Sbjct: 1 MRTSIQTFCALSLAFFLNTIFSGNAHADLRLCNKTDSQVGVAIGYKD-KSDWITEGWWNL 59
Query: 57 PGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRV 116
N+CET+V GAL SRYYY+YA W G MC + EF I I++C RG+ R
Sbjct: 60 ASNSCETLVPGALVSRYYYIYAVDYDQFGEWGGRAFMCTREKEFTIRGIEDCVARGFERT 119
Query: 117 GFTEYDTGQHENWTVQLTEPAQD 139
GF E DTG+ +WTVQLTEP Q
Sbjct: 120 GFFEIDTGEQSSWTVQLTEPVQQ 142
>gi|153008496|ref|YP_001369711.1| hypothetical protein Oant_1164 [Ochrobactrum anthropi ATCC 49188]
gi|151560384|gb|ABS13882.1| protein of unknown function DUF1036 [Ochrobactrum anthropi ATCC
49188]
Length = 153
Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats.
Identities = 65/139 (46%), Positives = 89/139 (64%), Gaps = 5/139 (3%)
Query: 1 MLRSFLICFCFGAMI----FCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQI 56
M + G ++ S + A FRVCN T+NL+GV++GY A K GW+TEGWW I
Sbjct: 1 MRLPLSLVLFAGVLMTALGMTSIEARADFRVCNATQNLVGVSIGYRA-KTGWVTEGWWHI 59
Query: 57 PGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRV 116
G++C+T+++G L SRYYYLYAE W G V MCV + EF I +++C+ RG+ R
Sbjct: 60 DGSSCKTLIEGPLTSRYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRN 119
Query: 117 GFTEYDTGQHENWTVQLTE 135
GF EYDTG+ +W VQLT+
Sbjct: 120 GFQEYDTGEQSSWMVQLTD 138
>gi|116253800|ref|YP_769638.1| hypothetical protein RL4061 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258448|emb|CAK09551.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 161
Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats.
Identities = 66/127 (51%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
F ++ + A FRVCNGT+NL+GVA+GY A G W+TEGWWQ+P TC T+++G L SRYY
Sbjct: 33 FFIADAARADFRVCNGTQNLVGVAIGYRAKDG-WVTEGWWQVPATTCATLIEGELQSRYY 91
Query: 75 YLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
YLYAE + W G+VQMCV ++EF I +++CY RGY ++GF EYDTG+ +W VQL+
Sbjct: 92 YLYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQKMGFKEYDTGRQGSWMVQLS 151
Query: 135 EPAQDRR 141
+ +
Sbjct: 152 DTPGTQE 158
>gi|239832837|ref|ZP_04681166.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825104|gb|EEQ96672.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 153
Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats.
Identities = 65/131 (49%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
A+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G C+T+
Sbjct: 9 LFAGVLITALGMTSIEARADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIEGAACKTL 67
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SRYYYLYAE W G V MCV + EF I +++C+ RG+ R GF EYDTG
Sbjct: 68 LEGPLSSRYYYLYAEDAQGGGRWEGKVNMCVAEKEFRITGVQDCFARGFQRNGFQEYDTG 127
Query: 125 QHENWTVQLTE 135
+ +W VQLT+
Sbjct: 128 EQSSWMVQLTD 138
>gi|299132067|ref|ZP_07025262.1| protein of unknown function DUF1036 [Afipia sp. 1NLS2]
gi|298592204|gb|EFI52404.1| protein of unknown function DUF1036 [Afipia sp. 1NLS2]
Length = 191
Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats.
Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Query: 17 CSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYL 76
S + A FR+CN T + +G+A+GY +G W+TEGWW I + CET++KG L +RYYY+
Sbjct: 31 SSTPARADFRLCNNTSSRVGIALGYKDSEG-WVTEGWWNISSHACETLLKGTLVARYYYI 89
Query: 77 YAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEP 136
Y W+G MC EF I +NC RG+ R GF E DTG+ +WTVQLTE
Sbjct: 90 YGLDYDRGGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFYEVDTGEQRSWTVQLTET 149
Query: 137 AQD 139
+
Sbjct: 150 TEQ 152
>gi|86359134|ref|YP_471026.1| hypothetical protein RHE_CH03543 [Rhizobium etli CFN 42]
gi|86283236|gb|ABC92299.1| hypothetical conserved membrane protein [Rhizobium etli CFN 42]
Length = 161
Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats.
Identities = 66/127 (51%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
F ++ + A FRVCNGT+NL+GVA+GY A G W+TEGWWQ+P TC T+++G L SRYY
Sbjct: 33 FFIADAARADFRVCNGTQNLVGVAIGYRAKDG-WITEGWWQVPATTCATLIEGELQSRYY 91
Query: 75 YLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
YLYAE + W G+VQMCV ++EF I +++CY RGY ++GF EYDTG+ +W VQL+
Sbjct: 92 YLYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQKMGFKEYDTGRQGSWMVQLS 151
Query: 135 EPAQDRR 141
+ +
Sbjct: 152 DTPGTQE 158
>gi|241206280|ref|YP_002977376.1| hypothetical protein Rleg_3591 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860170|gb|ACS57837.1| protein of unknown function DUF1036 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 157
Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats.
Identities = 66/127 (51%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
F ++ + A FRVCNGT+NL+GVA+GY A G W+TEGWWQ+P TC T+++G L SRYY
Sbjct: 29 FFIADAARADFRVCNGTQNLVGVAIGYRAKDG-WVTEGWWQVPATTCATLIEGELQSRYY 87
Query: 75 YLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
YLYAE + W G+VQMCV ++EF I +++CY RGY ++GF EYDTG+ +W VQL+
Sbjct: 88 YLYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQKMGFKEYDTGRQGSWMVQLS 147
Query: 135 EPAQDRR 141
+ +
Sbjct: 148 DTPGTQE 154
>gi|49474693|ref|YP_032735.1| hypothetical protein BQ12060 [Bartonella quintana str. Toulouse]
gi|49240197|emb|CAF26665.1| hypothetical protein BQ12060 [Bartonella quintana str. Toulouse]
Length = 177
Score = 194 bits (492), Expect = 5e-48, Method: Composition-based stats.
Identities = 56/138 (40%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Query: 1 MLRSFLICFCFGAMIF-CSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN 59
R + ++F N + A FRVCN T+ +GVA+GY + G W++EGWW +P
Sbjct: 23 FQRGLGVFLVSVLLLFPLVNFAKADFRVCNTTQRPVGVALGYRTLSG-WVSEGWWTVPVT 81
Query: 60 TCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFT 119
C+T+++G L SR+YY YAEG W G+V MCV +F I + +C+ RGY + F
Sbjct: 82 GCKTLIEGPLSSRFYYFYAEGAQKKGSWLGSVTMCVQDSQFTIEGVHDCFPRGYQKAEFQ 141
Query: 120 EYDTGQHENWTVQLTEPA 137
E DTG +W VQLT+ +
Sbjct: 142 EIDTGNQTSWMVQLTDTS 159
>gi|90418909|ref|ZP_01226820.1| conserved hypothetical protein, possible membrane protein
[Aurantimonas manganoxydans SI85-9A1]
gi|90336989|gb|EAS50694.1| conserved hypothetical protein, possible membrane protein
[Aurantimonas manganoxydans SI85-9A1]
Length = 157
Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats.
Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
+ ++ + A FRVCNGT++L+GVA+GY A + GW TEGWW+IP TC+ +
Sbjct: 19 MAAGLFLVSAPLTADAARADFRVCNGTQSLVGVAIGYRA-EAGWTTEGWWRIPATTCKAI 77
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
++G L SRYYY+YAE WAG V +C+ ++EF I +K+C+ RGY ++GF EYDTG
Sbjct: 78 IEGPLSSRYYYVYAEDSDGQGRWAGPVNLCIAENEFKIAGVKDCFKRGYQKMGFREYDTG 137
Query: 125 QHENWTVQLTEPAQD 139
+ +W VQLTE ++
Sbjct: 138 EQASWMVQLTEAPRE 152
>gi|298293062|ref|YP_003695001.1| hypothetical protein Snov_3107 [Starkeya novella DSM 506]
gi|296929573|gb|ADH90382.1| protein of unknown function DUF1036 [Starkeya novella DSM 506]
Length = 178
Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats.
Identities = 55/121 (45%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 18 SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLY 77
+ A FR+CN + + +G+A+GY W TEGWW I N+CET+++G L +RYYY+Y
Sbjct: 39 PEPAAADFRLCNRSTSRVGIALGYKDG-NSWSTEGWWNIGANSCETLLRGDLVARYYYVY 97
Query: 78 AEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPA 137
A WAG MC + EF I I++C RGY R GF E DT + ++WTVQLTE
Sbjct: 98 AIDYDLGGEWAGKAFMCTREKEFTIRGIEDCLARGYDRTGFFEVDTHEQKSWTVQLTEQK 157
Query: 138 Q 138
Q
Sbjct: 158 Q 158
>gi|163869164|ref|YP_001610414.1| hypothetical protein Btr_2431 [Bartonella tribocorum CIP 105476]
gi|161018861|emb|CAK02419.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 175
Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats.
Identities = 58/137 (42%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
L S L+ F F + A FRVCN T+ +G+A+GY G W++EGWW +P
Sbjct: 30 FLLSILLLFPFSVCV------KADFRVCNTTQQSVGIALGYRTFSG-WVSEGWWVVPVTE 82
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C+T+++G L SR+YY YAEG +WAG+V MCV +F I + +C+ RGY + F E
Sbjct: 83 CKTLIEGPLASRFYYFYAEGAQKKGNWAGSVTMCVQDSQFTIQGVHDCFPRGYQKAEFQE 142
Query: 121 YDTGQHENWTVQLTEPA 137
DTG +W VQLT+ +
Sbjct: 143 IDTGNQTSWMVQLTDDS 159
>gi|218663145|ref|ZP_03519075.1| hypothetical protein RetlI_29289 [Rhizobium etli IE4771]
Length = 131
Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats.
Identities = 66/127 (51%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
F ++ + A FRVCNGT+NL+GVA+GY A G W+TEGWWQ+P TC T+++G L SRYY
Sbjct: 3 FFIADAARADFRVCNGTQNLVGVAIGYRAKDG-WVTEGWWQVPATTCATLIEGELQSRYY 61
Query: 75 YLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
YLYAE + W G+VQMCV ++EF I +++CY RGY ++GF EYDTG+ +W VQL+
Sbjct: 62 YLYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQKMGFKEYDTGRQGSWMVQLS 121
Query: 135 EPAQDRR 141
+ +
Sbjct: 122 DTPGTQE 128
>gi|23010468|ref|ZP_00051146.1| COG5480: Predicted integral membrane protein [Magnetospirillum
magnetotacticum MS-1]
Length = 158
Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 76/128 (59%), Gaps = 1/128 (0%)
Query: 12 GAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHS 71
A+ + A R+CN T + +GV +GY +G W+TEGWW + CET+++G+L +
Sbjct: 27 AALTLLPFPALADLRLCNQTASKVGVTLGYRDAQG-WVTEGWWDLKPRNCETLLRGSLAA 85
Query: 72 RYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTV 131
++YY+YA + W+G MC F I +++C RG+ R GF E DTGQ NWT+
Sbjct: 86 QFYYVYAVDYTRGGEWSGRAMMCTRDTAFTIRGVEDCLARGFDRNGFIEVDTGQQRNWTI 145
Query: 132 QLTEPAQD 139
QL++P Q
Sbjct: 146 QLSDPGQP 153
>gi|240851247|ref|YP_002972650.1| hypothetical protein Bgr_18570 [Bartonella grahamii as4aup]
gi|240268370|gb|ACS51958.1| hypothetical protein Bgr_18570 [Bartonella grahamii as4aup]
Length = 142
Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats.
Identities = 55/131 (41%), Positives = 81/131 (61%), Gaps = 5/131 (3%)
Query: 7 ICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVK 66
+ F ++F + A FRVCN T+ +GVA+GY G W++EGWW +P C+T+++
Sbjct: 1 MLLLFPLVVF----AKADFRVCNTTQQSVGVALGYRTFSG-WVSEGWWTVPVTECKTLIE 55
Query: 67 GALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQH 126
G L SR+YY YAEG +WAG+V MCV +F I + +C+ RGY + F E DTG
Sbjct: 56 GPLASRFYYFYAEGAQKKGNWAGSVTMCVQDSQFTIQGVHDCFPRGYQKAEFKEIDTGNQ 115
Query: 127 ENWTVQLTEPA 137
+W +QLT+ +
Sbjct: 116 TSWMIQLTDES 126
>gi|222087049|ref|YP_002545584.1| hypothetical protein Arad_3784 [Agrobacterium radiobacter K84]
gi|221724497|gb|ACM27653.1| conserved hypothetical membrane protein [Agrobacterium radiobacter
K84]
Length = 181
Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats.
Identities = 64/120 (53%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
Query: 22 FAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGV 81
A FRVCNGT+NL+GVA+GY A +G W TEGWWQ+P TC T+++G L SRYYYLYAE
Sbjct: 60 HADFRVCNGTQNLVGVAIGYRAKEG-WTTEGWWQVPATTCATLIEGPLQSRYYYLYAEDA 118
Query: 82 SHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQDRR 141
+ W G+V+MCV ++EF I +K+CY RG+ ++GF EYDTG+ +W VQL++ +
Sbjct: 119 ARGGRWTGDVEMCVAENEFKIPGVKDCYARGFQKMGFKEYDTGRQASWMVQLSDTPGSQE 178
>gi|254473166|ref|ZP_05086564.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211957887|gb|EEA93089.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 161
Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats.
Identities = 63/135 (46%), Positives = 80/135 (59%), Gaps = 2/135 (1%)
Query: 6 LICFCFGAMIFCSNV-SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
L C FG + F + A FR CN T++ + +A+GY W+TEGWW I N C+T+
Sbjct: 23 LACVAFGVLSFQQIPSAKADFRACNKTESTVNIAIGYRDG-ADWITEGWWTIDKNACDTL 81
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
V G L SRYYYLYA + W G MCV Q +F I I++C RGY R GF E DTG
Sbjct: 82 VSGDLASRYYYLYAVQTDQNGEWDGKAYMCVRQKKFTIRGIEDCVARGYERTGFFEIDTG 141
Query: 125 QHENWTVQLTEPAQD 139
+ +WTVQLTEP +
Sbjct: 142 EQSSWTVQLTEPVEQ 156
>gi|300024149|ref|YP_003756760.1| hypothetical protein Hden_2643 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525970|gb|ADJ24439.1| protein of unknown function DUF1036 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 148
Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 56/124 (45%), Positives = 77/124 (62%), Gaps = 1/124 (0%)
Query: 17 CSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYL 76
+NV+ A ++CN T + +GVA+GY K GW TEGWW I TCET++KGAL SRY Y+
Sbjct: 23 SANVAHADLKLCNITSSRVGVAIGYQD-KTGWATEGWWNIASQTCETLLKGALPSRYVYV 81
Query: 77 YAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEP 136
+A W G MC + F I +++C RGY R GF E DTG+ + WT++LT+P
Sbjct: 82 HAVDYDRGGEWGGKNDMCTNEKSFAIRGVQDCEKRGYKRTGFFEVDTGEAKEWTIRLTDP 141
Query: 137 AQDR 140
Q +
Sbjct: 142 GQGK 145
>gi|49476170|ref|YP_034211.1| hypothetical protein BH15130 [Bartonella henselae str. Houston-1]
gi|49238978|emb|CAF28276.1| hypothetical protein BH15130 [Bartonella henselae str. Houston-1]
Length = 177
Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 53/121 (43%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Query: 17 CSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYL 76
+ + A FRVCN T+ +GVA+GY G W++EGWW +P C+T+++G L SR+YY
Sbjct: 40 FAGFAKADFRVCNTTQQPVGVALGYRTFSG-WVSEGWWVVPVTECKTLIEGPLSSRFYYF 98
Query: 77 YAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEP 136
YAEG W G+V MCV +F I + +C+ RGY + F E DTG +W VQLT+
Sbjct: 99 YAEGAEKKNSWPGSVTMCVQDSQFTIQGVHDCFPRGYQKAEFKEIDTGNQTSWMVQLTDE 158
Query: 137 A 137
+
Sbjct: 159 S 159
>gi|91975882|ref|YP_568541.1| hypothetical protein RPD_1403 [Rhodopseudomonas palustris BisB5]
gi|91682338|gb|ABE38640.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
BisB5]
Length = 196
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSH 83
FR+CN T + +G+A+GY V G W TEGWW + +CET+++G L +RYYY+YA
Sbjct: 39 DFRLCNNTSSRVGIALGYKDVDG-WTTEGWWNVASRSCETLLRGTLVARYYYIYALDYDR 97
Query: 84 SEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQD 139
W+G MC EF I +NC RG+ R GF E DTG+ WTVQLTE +
Sbjct: 98 GGEWSGQAFMCSRDKEFTIKGTENCLARGFDRTGFFEVDTGEQRAWTVQLTESNEQ 153
>gi|114704356|ref|ZP_01437264.1| hypothetical conserved membrane protein [Fulvimarina pelagi
HTCC2506]
gi|114539141|gb|EAU42261.1| hypothetical conserved membrane protein [Fulvimarina pelagi
HTCC2506]
Length = 136
Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats.
Identities = 66/129 (51%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Query: 10 CFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGAL 69
G F ++ + A FRVCNGT NL+GVA+GY A + GW +EGWW+IP TC+ ++ G L
Sbjct: 3 LAGLAFFGADDARADFRVCNGTANLVGVAIGYRA-EAGWTSEGWWRIPAETCKPLITGQL 61
Query: 70 HSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENW 129
SRYYYLYAE + WAG + +CV ++EF I + C RGY R+GF E+DTG+ E+W
Sbjct: 62 KSRYYYLYAEDANGEARWAGEIDLCVAENEFRIAGVSECLKRGYQRMGFREFDTGEQESW 121
Query: 130 TVQLTEPAQ 138
VQLTEP +
Sbjct: 122 MVQLTEPPR 130
>gi|163758854|ref|ZP_02165941.1| hypothetical protein HPDFL43_15562 [Hoeflea phototrophica DFL-43]
gi|162284144|gb|EDQ34428.1| hypothetical protein HPDFL43_15562 [Hoeflea phototrophica DFL-43]
Length = 145
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 67/139 (48%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
Query: 4 SFLICFCFGAMIFCS-NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCE 62
+ LI G ++ S + A FRVCNGT++L+G A+GY +G W+TEGWWQIP N+C
Sbjct: 5 AVLIPMVAGILMLASVEDAKADFRVCNGTQSLVGGAIGYRTAEG-WVTEGWWQIPANSCA 63
Query: 63 TVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYD 122
T+++G L SRYYYLYAE WAG + MCV +EF IV +++C+ RG+ RVGF EYD
Sbjct: 64 TLIEGQLQSRYYYLYAEDAGGGGRWAGGINMCVADNEFRIVGVEDCFARGFQRVGFKEYD 123
Query: 123 TGQHENWTVQLTEPAQDRR 141
TG+ +W VQL++ + +
Sbjct: 124 TGRQGSWMVQLSDAPEAQE 142
>gi|312113396|ref|YP_004010992.1| hypothetical protein Rvan_0615 [Rhodomicrobium vannielii ATCC
17100]
gi|311218525|gb|ADP69893.1| protein of unknown function DUF1036 [Rhodomicrobium vannielii ATCC
17100]
Length = 181
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+ R+ + F + + A ++CN T + IGVA+GY G W++EGWW + +
Sbjct: 12 LARAIALAGVFCLGLALPAPANAELKLCNSTASRIGVAIGYKDKDG-WVSEGWWNVDSQS 70
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C +++ L +R+YY+YA W G + MC EF I I NC RG+ + GF E
Sbjct: 71 CALLIQDKLRARFYYVYAFDYDKGGEWGGAIAMCTNDVEFTIKGIDNCDGRGFKKSGFFE 130
Query: 121 YDTGQHENWTVQLTEPAQ 138
DT + +WTV+LT+ ++
Sbjct: 131 VDTQEQTDWTVKLTDQSE 148
>gi|154246007|ref|YP_001416965.1| hypothetical protein Xaut_2064 [Xanthobacter autotrophicus Py2]
gi|154160092|gb|ABS67308.1| protein of unknown function DUF1036 [Xanthobacter autotrophicus
Py2]
Length = 182
Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats.
Identities = 53/117 (45%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSH 83
FR+CN T++ IG+A+GY W TEGWW + N+CET+++G L +R+YYLYA
Sbjct: 50 EFRLCNRTQSRIGIALGYKDGD-IWTTEGWWNVSANSCETLLRGELSARFYYLYAVDYDQ 108
Query: 84 SEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQDR 140
WAG MC + EF I +C RG+ R GF E DT + + WTVQLTE Q +
Sbjct: 109 GGEWAGKAYMCTREKEFTIKAADDCLARGFDRTGFFEVDTKEQKAWTVQLTESNQTK 165
>gi|182680136|ref|YP_001834282.1| hypothetical protein Bind_3233 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636019|gb|ACB96793.1| protein of unknown function DUF1036 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 146
Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats.
Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
F + G ++ C + A FR+CN T + + V++ Y + W++EGWW + + CET+
Sbjct: 9 FGLLLACGLVLTCQEPARADFRLCNNTDSRVSVSLAYTDGET-WVSEGWWNLKPSGCETL 67
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
V+G L + +YY+YA W G MC EF I ++C+ RG+ R GF E DTG
Sbjct: 68 VRGPLAAEFYYVYAMD-ERGGEWKGKAFMCTRDREFRINGRQDCFVRGFDRTGFFEVDTG 126
Query: 125 -QHENWTVQLTEPAQDR 140
+ +NWTVQLT+ + R
Sbjct: 127 KEAKNWTVQLTDTSAGR 143
>gi|217979800|ref|YP_002363947.1| protein of unknown function DUF1036 [Methylocella silvestris BL2]
gi|217505176|gb|ACK52585.1| protein of unknown function DUF1036 [Methylocella silvestris BL2]
Length = 143
Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats.
Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
Query: 7 ICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVK 66
G + + + A FR+CN T + +++ Y + W++EGWW + CET+V+
Sbjct: 8 ATIGLGLFLASALPASADFRLCNNTASRTSISLAYTDGE-IWVSEGWWNLKPGACETLVR 66
Query: 67 GALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG-Q 125
G L + +YY+YA W G MC EF I+ ++CY RG+ R GF E DTG +
Sbjct: 67 GPLAAEFYYVYAMD-ERGGEWKGKAFMCTRDREFRILGREDCYVRGFDRTGFFEVDTGKE 125
Query: 126 HENWTVQLTEPAQDR 140
+NWTVQLT+PA +
Sbjct: 126 AKNWTVQLTDPAPQK 140
>gi|296445889|ref|ZP_06887840.1| protein of unknown function DUF1036 [Methylosinus trichosporium
OB3b]
gi|296256557|gb|EFH03633.1| protein of unknown function DUF1036 [Methylosinus trichosporium
OB3b]
Length = 165
Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats.
Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
M + F + + + A FR+CN T N + VA+ Y +G W++EGWW + +
Sbjct: 25 MTKRFAPTVIVSFWLCATTAAEADFRMCNNTSNRVSVALAYTDGRG-WLSEGWWNLRASD 83
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
CET+++G L ++YYY+YA W G MC EF I ++C+ RG+ R GF E
Sbjct: 84 CETLLRGPLAAQYYYIYAMD-ERGGEWKGKAFMCTRDREFRIDGREDCFARGFDRTGFFE 142
Query: 121 YDTG-QHENWTVQLTEP 136
DTG +NWTVQLT+P
Sbjct: 143 IDTGRDAKNWTVQLTDP 159
>gi|27382248|ref|NP_773777.1| hypothetical protein blr7137 [Bradyrhizobium japonicum USDA 110]
gi|27355419|dbj|BAC52402.1| blr7137 [Bradyrhizobium japonicum USDA 110]
Length = 199
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+L + + ++ + A FR+CN T + +G+A+GY +G W TEGWW I +
Sbjct: 12 LLARLVPVLAIAVLCLWTSPASADFRLCNNTSSRVGIALGYKDAEG-WTTEGWWNISSRS 70
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
CET+++G L +RYYY+YA W+G MC EF I ++C RGY R G+ E
Sbjct: 71 CETLLRGTLVARYYYIYAIDYDRGGEWSGQAFMCSRDKEFTIRGTEDCLARGYDRTGYFE 130
Query: 121 YDTGQHENWTVQLTEPAQD 139
DTG+ WTVQLT+ +
Sbjct: 131 VDTGEQRAWTVQLTDANEQ 149
>gi|170743310|ref|YP_001771965.1| hypothetical protein M446_5206 [Methylobacterium sp. 4-46]
gi|168197584|gb|ACA19531.1| protein of unknown function DUF1036 [Methylobacterium sp. 4-46]
Length = 116
Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats.
Identities = 52/113 (46%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
Query: 27 VCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEH 86
+CN T + +GVA+GY GGW+TEGWW + G CET++KGAL +RYYY++A
Sbjct: 1 MCNMTGSRVGVALGYRDA-GGWVTEGWWNLSGKACETLLKGALAARYYYVFAVDYDRGGE 59
Query: 87 WAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQD 139
W+G MC EF I +++C RG+ R GF E DTG+ ++WT+QLT+P +
Sbjct: 60 WSGRSLMCTRDREFTIRGVEDCLARGFDRNGFFEVDTGEQKSWTIQLTDPGRP 112
>gi|220925791|ref|YP_002501093.1| hypothetical protein Mnod_5963 [Methylobacterium nodulans ORS 2060]
gi|219950398|gb|ACL60790.1| protein of unknown function DUF1036 [Methylobacterium nodulans ORS
2060]
Length = 151
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 54/114 (47%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Query: 26 RVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSE 85
R+CN T + IGVA+GY GGW+TEGWW + CET++KGAL +RYYY++A
Sbjct: 35 RMCNMTGSRIGVALGYRDA-GGWVTEGWWNLSARACETLLKGALAARYYYVFAVDYDRGG 93
Query: 86 HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQD 139
W+G MC EF I +++C RGY R GF E DTG+ ++WT+QLT+P +
Sbjct: 94 EWSGRSLMCTRDREFTIRGVEDCLARGYDRNGFFEVDTGEQKSWTIQLTDPGRP 147
>gi|188582113|ref|YP_001925558.1| hypothetical protein Mpop_2868 [Methylobacterium populi BJ001]
gi|179345611|gb|ACB81023.1| protein of unknown function DUF1036 [Methylobacterium populi BJ001]
Length = 163
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 48/114 (42%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Query: 26 RVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSE 85
R+CN T + +GV +GY +G W+TEGWW + +CET+++G+L +++YY+YA +
Sbjct: 46 RLCNQTASKVGVTLGYRDAQG-WVTEGWWDLKPRSCETLLRGSLAAQFYYVYAVDYTRGG 104
Query: 86 HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQD 139
W+G MC F I +++C RG+ R GF E DTGQ NWT+QL++P Q
Sbjct: 105 EWSGRAMMCTRDTAFTIRGVEDCLARGFDRNGFIEVDTGQQRNWTIQLSDPGQP 158
>gi|304393438|ref|ZP_07375366.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303294445|gb|EFL88817.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 159
Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 58/119 (48%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
Query: 22 FAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGV 81
A VCN T+NL+GV+VGY K W +EGWW+IP C V+KG+L++RY+YL+AE
Sbjct: 26 RADLSVCNTTENLVGVSVGYRD-KEMWKSEGWWRIPAGDCAAVIKGSLNARYFYLHAEDS 84
Query: 82 SHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQDR 140
W G V MC EFNI ++NC+ RG+ R GF E DTG+ NW V+L P Q R
Sbjct: 85 VTGGQWRGPVFMCTSSKEFNIEGLENCFARGHERTGFFEIDTGKQTNWQVRL-NPGQAR 142
>gi|319409347|emb|CBI82991.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 128
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 31 TKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGN 90
T+ +G+A+GY + W++EGWW IP C++++ G L SR+YYLYAE W G+
Sbjct: 2 TQKTVGIALGYRTL-SDWVSEGWWVIPPTVCKSLIDGPLSSRFYYLYAEDAQKKGSWVGS 60
Query: 91 VQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
+ MCV +F I + +C+ RG+ + F E DTG +W VQLT+
Sbjct: 61 ITMCVKDSKFVIEGVHDCFARGFQKATFEEIDTGNQTSWMVQLTD 105
>gi|99082721|ref|YP_614875.1| hypothetical protein TM1040_2881 [Ruegeria sp. TM1040]
gi|99039001|gb|ABF65613.1| protein of unknown function DUF1036 [Ruegeria sp. TM1040]
Length = 128
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 7 ICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVK 66
M+ C + + A F +CN T N ++GY + W++EGWW + C +
Sbjct: 3 PLLVSALMVVCGSAALADFEICNETGNEAFASIGYKDGE-EWVSEGWWTLQPGECAIPIV 61
Query: 67 GALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQH 126
G L +RYYY+ AE S + +W G+ C D F I +NC RGY GF E DTG
Sbjct: 62 GDLKNRYYYIRAE--SKTGNWTGDYSFCYINDVFTIRGDENCTARGYKTGGFFEVDTGNS 119
Query: 127 ENWTVQLTE 135
+WT LT+
Sbjct: 120 LDWTQNLTD 128
>gi|323136222|ref|ZP_08071304.1| protein of unknown function DUF1036 [Methylocystis sp. ATCC 49242]
gi|322398296|gb|EFY00816.1| protein of unknown function DUF1036 [Methylocystis sp. ATCC 49242]
Length = 140
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 50/119 (42%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 22 FAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGV 81
A FR+CN T + VA+ Y K W++EGWW + CET+++G L ++YYY+YA
Sbjct: 21 RADFRLCNNTTTRVSVAIAYTDGKN-WLSEGWWNLRPTACETLLRGPLAAQYYYVYAMD- 78
Query: 82 SHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG-QHENWTVQLTEPAQD 139
W G MC EF I ++C+ RGY R GF E DTG ++WTVQLT+P
Sbjct: 79 ERGGEWKGKAFMCTRDREFRIDGREDCFARGYERTGFFEIDTGRDAKSWTVQLTDPNAA 137
>gi|259417759|ref|ZP_05741678.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259346665|gb|EEW58479.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 128
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
M+ C + + A F +CN T N ++GY + W++EGWW + + C
Sbjct: 1 MRPLIVSALMVLCGSAALADFEICNETSNEAFASIGYKDGED-WVSEGWWTLQPDECAIA 59
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
V G L +RYYY+ AE S + +W G+ C D + I +NC +RGY GF E DTG
Sbjct: 60 VVGDLKNRYYYVRAE--SKTGNWTGDYSFCYINDPYTIRGDENCTSRGYKTGGFFEVDTG 117
Query: 125 QHENWTVQLTE 135
+WT LT+
Sbjct: 118 NSLDWTQNLTD 128
>gi|121601910|ref|YP_988472.1| hypothetical protein BARBAKC583_0134 [Bartonella bacilliformis
KC583]
gi|120614087|gb|ABM44688.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 121
Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats.
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 35 IGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMC 94
+GVA+GY A G W++EGWW +P C+T++ G L SR+YY++AE W G V MC
Sbjct: 1 MGVALGYRAPSG-WVSEGWWVVPTAECKTLIDGQLISRFYYMHAEDAERKNGWNGPVTMC 59
Query: 95 VGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPA 137
V F I + +C+ RG+ + F E DTG NWTVQLTE +
Sbjct: 60 VKDSSFLIEGVHDCFARGFQKAYFEEIDTGNQINWTVQLTESS 102
>gi|84685787|ref|ZP_01013683.1| hypothetical protein 1099457000261_RB2654_13750 [Maritimibacter
alkaliphilus HTCC2654]
gi|84665880|gb|EAQ12354.1| hypothetical protein RB2654_13750 [Rhodobacterales bacterium
HTCC2654]
Length = 340
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 21 SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEG 80
+ AG CN T + VA+GY + G WM+EGWW I C+TV+ L +YY AE
Sbjct: 2 AQAGLEFCNQTGSSASVAIGYKSADG-WMSEGWWNIDTGACKTVISRDLDKTHYYWRAE- 59
Query: 81 VSHSEHWA-GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQD 139
S W+ N C + F I+ ++C RGY R GF E T +T+ LT
Sbjct: 60 -SRDLSWSHANFMFCTSDEVFTILGDEDCTARGYDREGFNEIKTEGFTTFTMNLTHTGDG 118
Query: 140 RR 141
R
Sbjct: 119 RE 120
>gi|126732841|ref|ZP_01748634.1| hypothetical protein SSE37_03040 [Sagittula stellata E-37]
gi|126706680|gb|EBA05753.1| hypothetical protein SSE37_03040 [Sagittula stellata E-37]
Length = 138
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 1 MLRSFLICFCFGAMI--FCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPG 58
ML + L F G + S + A F VCN T N++ VAVG A + + T GWW +
Sbjct: 1 MLPALLRLFSAGCAVIFLSSTQAAAQFAVCNQTLNVLNVAVGRYAYEN-FTTSGWWTVGP 59
Query: 59 NTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGF 118
N C V+ L RY Y++A+ V E G MC+ F+IV ++C RGYL F
Sbjct: 60 NRCANVIDRVLDVRYVYVFAQDVFGKEIMRGATPMCIDTKRFDIVGEEDCLLRGYLEARF 119
Query: 119 TEYDTGQHENWTVQLTEPA 137
E DT + E WT+ + P+
Sbjct: 120 HEVDTFKSERWTLFIYPPS 138
>gi|13472162|ref|NP_103729.1| hypothetical protein mlr2364 [Mesorhizobium loti MAFF303099]
gi|14022907|dbj|BAB49515.1| mlr2364 [Mesorhizobium loti MAFF303099]
Length = 166
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 4 SFLICFCFGAM-IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCE 62
+F F + IF + + A F VCN T +++ +AVG V T+GWW I N C
Sbjct: 32 AFSALFSAALLVIFSTKSAHAEFTVCNQTLDVVNLAVGQK-VDNADQTDGWWTIGANQCV 90
Query: 63 TVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYD 122
V++ L +RY YLYA V G+ +MCV + F+I I+ C+ RG++ F E D
Sbjct: 91 NVIREELANRYIYLYATDVFGHAILNGSTEMCVDRRRFSIRGIEECWQRGHIAARFVEVD 150
Query: 123 TGQHENWTVQLT 134
T + WT LT
Sbjct: 151 TLEQVRWTYFLT 162
>gi|209964806|ref|YP_002297721.1| hypothetical protein RC1_1504 [Rhodospirillum centenum SW]
gi|209958272|gb|ACI98908.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 155
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 1/132 (0%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
A + +V+ A VCN + VA+G G W + GWW I C
Sbjct: 25 GLTAAVAAMASLVWVSVADARLTVCNRVSEPVKVALGVEEGDG-WRSRGWWHIAPGECRA 83
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
++ L YYL AE W G+ CV +F I +C RG+ GF T
Sbjct: 84 LLDTDLKLLEYYLRAEPEEPGTGWGGDFPFCVDGKDFEIGGDTDCEARGHRTAGFFLLST 143
Query: 124 GQHENWTVQLTE 135
+ T LT+
Sbjct: 144 DGASSMTHNLTD 155
>gi|126724872|ref|ZP_01740715.1| hypothetical protein RB2150_13591 [Rhodobacterales bacterium
HTCC2150]
gi|126706036|gb|EBA05126.1| hypothetical protein RB2150_13591 [Rhodobacterales bacterium
HTCC2150]
Length = 285
Score = 147 bits (370), Expect = 7e-34, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 5 FLICFCFGAMIFCSNV-SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
+F S + AG +CN T ++ G+++GY GGW +EGWW I C T
Sbjct: 35 LTSAIVASFFVFQSTTEANAGLEICNTTGDVQGISIGYK-GDGGWTSEGWWLIEPTKCAT 93
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+ G L+ + YY AE ++ G+ C + IV NC RGY R F +D
Sbjct: 94 PIGGDLNQQTYYYRAE-INGGPFEGGSYYFCTDTAAYTIVGDTNCKDRGYDRESFQPFDV 152
Query: 124 GQ-HENWTVQLTEP 136
G+ +N+T+ LT
Sbjct: 153 GEGTKNYTLTLTSA 166
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 8 CFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG 67
+ S G R CN TK+ V++GY W +EGWW + C V++G
Sbjct: 160 TLTLTSANTTSAAKDEGLRFCNETKDSQSVSIGY-EGDEAWTSEGWWVMEPGKCSMVIRG 218
Query: 68 ALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHE 127
L YYY AE V+ + C E+ I+ K+C RGY R F DT +
Sbjct: 219 ELKDTYYY-RAE-VNGGDFDGEAYYFCTTPTEYTILGDKDCKGRGYDRESFRLIDTSKA- 275
Query: 128 NWTVQLT 134
+ LT
Sbjct: 276 DGVFTLT 282
>gi|319778083|ref|YP_004134513.1| hypothetical protein Mesci_6363 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317171802|gb|ADV15339.1| protein of unknown function DUF1036 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 131
Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 10 CFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGAL 69
+ S+ + A F VCN T +++ +AVG V T+GWW I N C V++ L
Sbjct: 4 AALLAVLSSSEARAEFTVCNQTLDVVNLAVGQK-VDNADQTDGWWTIGANQCVNVIREEL 62
Query: 70 HSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENW 129
+RY Y+YA V G+ +MC+ + F+I I C+ RG++ F E DT + W
Sbjct: 63 TNRYIYIYATDVFGHAILTGSTEMCLERRRFSIRGIDECWQRGHIAAQFLEVDTLEQARW 122
Query: 130 TVQLT 134
T LT
Sbjct: 123 TFFLT 127
>gi|126727532|ref|ZP_01743365.1| hypothetical protein RB2150_09514 [Rhodobacterales bacterium
HTCC2150]
gi|126703122|gb|EBA02222.1| hypothetical protein RB2150_09514 [Rhodobacterales bacterium
HTCC2150]
Length = 555
Score = 144 bits (363), Expect = 4e-33, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 5 FLICFCFGAMIF-CSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
+ +F +N + AG +CN T ++ +++GY GGW ++GWW I C T
Sbjct: 35 LTLAIVASFFVFQSTNEANAGLEICNTTGDVQEISIGYK-GDGGWTSKGWWLIEPTKCAT 93
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
+ L+ + YY AE ++ + C IV C RGY R F +D
Sbjct: 94 PIGDDLNQQTYYYRAE-INGGPFEGASYYFCTDTAAHTIVGDTKCKDRGYDRESFQPFDV 152
Query: 124 G-QHENWTVQLTEP 136
G +++T+ LT
Sbjct: 153 GSGTKDYTLTLTSA 166
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Query: 8 CFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG 67
+ S G R+CN TKN V++GY W +EGWW + C VV+G
Sbjct: 160 TLTLTSANTTSVAKDEGLRICNETKNSQSVSIGY-EGDEAWTSEGWWVMEPGKCSMVVRG 218
Query: 68 ALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHE 127
L YYY AE V+ + C + I +C RGY R F DT +
Sbjct: 219 ELKDTYYY-RAE-VNGGDFDGEAYYFCTTPKAYTIYGDTDCKGRGYDRESFRLIDTSKA- 275
Query: 128 NWTVQLT 134
+ LT
Sbjct: 276 DGVFTLT 282
>gi|84685786|ref|ZP_01013682.1| hypothetical protein 1099457000261_RB2654_13745 [Maritimibacter
alkaliphilus HTCC2654]
gi|84665879|gb|EAQ12353.1| hypothetical protein RB2654_13745 [Rhodobacterales bacterium
HTCC2654]
Length = 354
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 9 FCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG- 67
F F C +FA CN T ++ VA+GY W++EGWW + C TV+ G
Sbjct: 5 FLFVLFSLCPAAAFADVEFCNSTDAVVSVAIGYK-GDADWVSEGWWNVDPGDCRTVLPGN 63
Query: 68 ALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHE 127
S YYY G EH C D F IV NC +RGY R GF E
Sbjct: 64 TPKSHYYYRVESGAYAFEHET--YMFCTSDDVFTIVGDTNCESRGYDREGFNEIAMEGRP 121
Query: 128 NWTVQLT 134
+T+ +T
Sbjct: 122 GFTIDIT 128
>gi|259417891|ref|ZP_05741810.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259346797|gb|EEW58611.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 137
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
M S L N A F CN T ++ VA+ G + + GWW + N
Sbjct: 1 MKLSVLSGVVAAFTTLVPNAGQAKFTFCNQTLDVANVAIS-AFNDGAFESSGWWVVGPNQ 59
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
C V+ +L SR+ Y++A+ V G MCV F I + C TRGY+ F E
Sbjct: 60 CAEVISQSLRSRFVYVFAKDVFGRALLDGVASMCVDTGRFQIRGEEECLTRGYIDARFHE 119
Query: 121 YDTGQHENWTVQLTEPAQ 138
DT Q ++WT L A
Sbjct: 120 VDTQQSDSWTFFLRSAAD 137
>gi|119485996|ref|ZP_01620058.1| hypothetical protein L8106_05730 [Lyngbya sp. PCC 8106]
gi|119456771|gb|EAW37899.1| hypothetical protein L8106_05730 [Lyngbya sp. PCC 8106]
Length = 147
Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
+ G++ F S + A +VCN T + + A Y +G W W+ I TC+ V
Sbjct: 14 IAVLSLVGSVAFHSEPAQAYMKVCNRTGSTVRAAFAY-GEQGIWRNRSWFYINDGTCQVV 72
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDE------FNIVDIKNCYTRGYLRVGF 118
L +RYYY YAE +S +W G++ CV D ++ C +RG +
Sbjct: 73 YHPELWNRYYYFYAEALSGGYYWTGDMSFCVNSDYGKKTTVSTPINASQC-SRGQKIIRM 131
Query: 119 TEYDTGQHENWTVQL 133
E DT + +++ + L
Sbjct: 132 QEVDTHKTKDYVMNL 146
>gi|163740872|ref|ZP_02148265.1| hypothetical protein RG210_13566 [Phaeobacter gallaeciensis 2.10]
gi|161385863|gb|EDQ10239.1| hypothetical protein RG210_13566 [Phaeobacter gallaeciensis 2.10]
Length = 364
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 12/134 (8%)
Query: 1 MLRSFLICFCFGAMIFCSN----------VSFAGFRVCNGTKNLIGVAVGYPAVKGGWMT 50
M ++ F + S+AG +CN T V++ Y G WM+
Sbjct: 1 MRARLILAFLLAPLGLAPPVQGEAAGPDGPSYAGLEICNDTAVPQSVSLAYRD-DGRWMS 59
Query: 51 EGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYT 110
GWW +P TCE V+ G L +R+YY +E + + C EF I ++C
Sbjct: 60 HGWWALPPETCERVLDGPLKNRFYYFRSEAQNWQ-FLDERISFCTAPGEFTIYGDRDCAI 118
Query: 111 RGYLRVGFTEYDTG 124
RGY F + DT
Sbjct: 119 RGYDSAFFAKIDTD 132
>gi|81300396|ref|YP_400604.1| integral membrane protein-like [Synechococcus elongatus PCC 7942]
gi|22002502|gb|AAM82654.1| unknown [Synechococcus elongatus PCC 7942]
gi|81169277|gb|ABB57617.1| integral membrane protein-like [Synechococcus elongatus PCC 7942]
Length = 146
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 8 CFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG 67
+ + + A +CN T+ + +AVGY + W + GW+ I CETVV G
Sbjct: 19 TVAWLGFSSFAEPASAELVICNKTRKTVNLAVGYKEGE-SWRSRGWYSISPRGCETVVGG 77
Query: 68 ALHSRYYYLYAEGVSHSEHWAGNVQMCVGQ-DEFNIVDIKNCYTRGYLRVGFTEYDTGQH 126
L RYYY YAE S W G+ C+ +EF+I+ +NC RGYL GF+E DT
Sbjct: 78 RLKLRYYYYYAENTDASLLWEGDYNFCIRDPEEFSILGDQNCERRGYLTQGFSEIDTKNA 137
Query: 127 ENWTVQLTE 135
+++T+ LT+
Sbjct: 138 KSFTLDLTD 146
>gi|260762501|ref|ZP_05874838.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260672927|gb|EEX59748.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
Length = 100
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+ + GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++
Sbjct: 5 LSLALFAGVLTGALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSS 63
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQ 97
C+T+++G L SRYYYLYAE W G V MCV +
Sbjct: 64 CKTLIEGPLTSRYYYLYAEDAQGGGRWEGKVNMCVAE 100
>gi|118588939|ref|ZP_01546346.1| hypothetical protein SIAM614_12843 [Stappia aggregata IAM 12614]
gi|118438268|gb|EAV44902.1| hypothetical protein SIAM614_12843 [Stappia aggregata IAM 12614]
Length = 152
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 19 NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYA 78
+ + AG RVCNG+ +L+ VA+GY +G TEGWW I N C V++ L YYL+
Sbjct: 36 SSAHAGLRVCNGSVDLVNVALGYETDEGL-RTEGWWTITANACSQVLQEPLKKARYYLHV 94
Query: 79 EGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
G++ +C+ +++F + D C+ RG + F + +T ++WTV L+
Sbjct: 95 ADGFGESRLGGDITLCIREEKFVLYDGDQCWQRGLIEADFFQVETEGKQDWTVLLS 150
>gi|218463506|ref|ZP_03503597.1| hypothetical protein RetlK5_30563 [Rhizobium etli Kim 5]
Length = 99
Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 56 IPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLR 115
+P TC T+++G L SRYYYLYAE + W G+VQMCV ++EF I +++CY RGY +
Sbjct: 11 VPATTCATLIEGELQSRYYYLYAEDAARGGRWTGDVQMCVAENEFKISGVQDCYARGYQK 70
Query: 116 VGFTEYDTGQHENWTVQLTEPAQDRR 141
+GF EYDTG+ +W VQL++ +
Sbjct: 71 MGFKEYDTGRQGSWMVQLSDTPGTQE 96
>gi|163737446|ref|ZP_02144863.1| integral membrane protein-like protein [Phaeobacter gallaeciensis
BS107]
gi|161388972|gb|EDQ13324.1| integral membrane protein-like protein [Phaeobacter gallaeciensis
BS107]
Length = 364
Score = 134 bits (337), Expect = 4e-30, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 20 VSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAE 79
S+AG +CN T V++ Y G WM+ GWW +P TCE V+ L +R+YY +E
Sbjct: 30 PSYAGLEICNDTAVPQSVSLAYRD-DGRWMSHGWWALPPETCERVLDDPLKNRFYYFRSE 88
Query: 80 GVSHSEHW---AGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG 124
E+W + C EF I ++C RGY F + DT
Sbjct: 89 A----ENWQFLDERISFCTAPGEFTIYGDRDCAIRGYDSAFFAKIDTD 132
>gi|56695978|ref|YP_166332.1| hypothetical protein SPO1081 [Ruegeria pomeroyi DSS-3]
gi|56677715|gb|AAV94381.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 152
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCET 63
++ + A +CN T + VA+ Y + W ++GW+ + C+T
Sbjct: 15 RMTRAIAILCLLLAPGTAQAELEICNDTPVVQSVALAYRGGED-WNSQGWYVFEPDQCQT 73
Query: 64 VVKGALHSRYYYLYAEGVSHSEHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
V++G L +RYYY+ A E W ++ CV Q F+IV +NC RG + F E
Sbjct: 74 VLEGDLSNRYYYVTALA----EGWVFDHQDIAFCVKQGVFDIVGAENCRDRGLITNLFRE 129
Query: 121 YDTGQHEN 128
DTG
Sbjct: 130 VDTGPRAT 137
>gi|254698062|ref|ZP_05159890.1| hypothetical protein Babob28_10233 [Brucella abortus bv. 2 str.
86/8/59]
Length = 92
Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETV 64
GA+ S + A FRVCN T+NL+GVA+GY A K GW+TEGWW I G++C+T+
Sbjct: 1 MFAGVLTGALGMTSIEAHADFRVCNATQNLVGVAIGYRA-KTGWVTEGWWHIDGSSCKTL 59
Query: 65 VKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQ 97
++G L SRYYYLYAE W G V MCV +
Sbjct: 60 IEGPLTSRYYYLYAEDAQGGGRWEGKVNMCVAE 92
>gi|259415791|ref|ZP_05739711.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259347230|gb|EEW59007.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 335
Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 18 SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLY 77
V+ A +CN T + VA+GY + W++EGWWQ+P C VV G L R+YYL
Sbjct: 19 PFVAQAALDLCNDTSDPQNVAIGYKSAD-SWVSEGWWQVPVGECAEVVPGVLPRRFYYLR 77
Query: 78 AEGVSHSEHW---AGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTG-QHENWTVQL 133
E +E W + CV D+F+I +C RG+ F DTG + +++ L
Sbjct: 78 VE----TEGWVFTDDKLGFCVDDDDFSISGDDSCARRGFRHENFARIDTGPETPDYSHSL 133
Query: 134 T---EPAQDRR 141
+ +PA R
Sbjct: 134 SLNLKPADPDR 144
>gi|56750053|ref|YP_170754.1| hypothetical protein syc0044_c [Synechococcus elongatus PCC 6301]
gi|56685012|dbj|BAD78234.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 110
Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 27 VCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEH 86
+CN T+ + +AVGY + W + GW+ I CETVV G L RYYY YAE S
Sbjct: 2 ICNKTRKTVNLAVGYKEGE-SWRSRGWYSISPRGCETVVGGRLKLRYYYYYAENTDASLL 60
Query: 87 WAGNVQMCVGQ-DEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
W G+ C+ +EF+I+ +NC RGYL GF+E DT +++T+ LT+
Sbjct: 61 WEGDYNFCIRDPEEFSILGDQNCERRGYLTQGFSEIDTKNAKSFTLDLTD 110
>gi|154250752|ref|YP_001411576.1| hypothetical protein Plav_0296 [Parvibaculum lavamentivorans DS-1]
gi|154154702|gb|ABS61919.1| protein of unknown function DUF1036 [Parvibaculum lavamentivorans
DS-1]
Length = 333
Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 50/120 (41%), Gaps = 11/120 (9%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSH 83
G CN T+ L+ AVGY G M+ GW +I TC +KG L Y+ YAE +
Sbjct: 214 GLSFCNKTEELVWAAVGYLDS-GDDMSSGWIRIEPGTCRKSIKGKLSGDTYFAYAEAIDE 272
Query: 84 SE----------HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQL 133
+ W G C F I C +RG+ + GF DTG +V L
Sbjct: 273 TGAVARRNGEPMIWGGTENFCTKATRFEIRGRDRCASRGFDQRGFMRIDTGGAARLSVDL 332
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Query: 1 MLRSFLIC--FCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPG 58
M +S I F + F S + A +R CN T ++ + GW ++
Sbjct: 1 MRKSLQIAAAVLFACLAF-SAPAHADYRFCNKTSYVLD-GAIAVEAGAAATSSGWLRVQP 58
Query: 59 NTCETVVKGALHSRYYYLYAEGVSHSEH----WAGNVQMCVGQDEFNIVDIKNCYTRGYL 114
C +++G + + YY+YA + ++GN + C+ +DEF + + C RGY
Sbjct: 59 GECGVMLEGDIVEQKYYVYARTIDAHLGSVKYFSGNERFCIVEDEFAVEGREQCAMRGYD 118
Query: 115 RVGFTEYDTGQHENWTVQLTEPAQ 138
F + T + WT +E +
Sbjct: 119 SADFLQVATKPGKEWTTTFSEASD 142
>gi|254477063|ref|ZP_05090449.1| conserved hypothetical protein [Ruegeria sp. R11]
gi|214031306|gb|EEB72141.1| conserved hypothetical protein [Ruegeria sp. R11]
Length = 349
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 4 SFLICFCFGAMIFCSNVSFAG--FRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC 61
+F I ++ + A R+CN T +V + G W++EGW + C
Sbjct: 10 AFAILLAALGWGGATSAAPAAERIRLCNDTSVPQSSSVAFRR-DGQWISEGWTMLLPGAC 68
Query: 62 ETVVKGALHSRYYYLYAEGVSHSEHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVGF 118
+V+G L +R+YY +E S W + CVG ++F I +C RGYL F
Sbjct: 69 APIVEGPLTNRFYYFRSE----SPGWTFRDERINFCVGPEDFTIFGDHDCAVRGYLPGAF 124
Query: 119 TEYDT 123
+ DT
Sbjct: 125 AKIDT 129
>gi|254293242|ref|YP_003059265.1| hypothetical protein Hbal_0874 [Hirschia baltica ATCC 49814]
gi|254041773|gb|ACT58568.1| conserved hypothetical protein [Hirschia baltica ATCC 49814]
Length = 353
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 12/142 (8%)
Query: 7 ICFCFGAMIFCSNVSFA-------GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN 59
+ F +F FA G+R+CN T ++ + G P + EGW ++
Sbjct: 15 VFLAFATTMFAIFSPFAQAQSNANGWRLCNETSFVLEASTGRPESAASVVVEGWTRLRPG 74
Query: 60 TCETVVKGALHSRYYYLYAEGVS----HSEHWAGNVQMCVGQD-EFNIVDIKNCYTRGYL 114
C + L +Y+ A S W G+V +CV F + + +C G
Sbjct: 75 ECRIAIPAPLREGLHYVMARSSSAHHGGQRTWGGDVPLCVDSTGSFAVENPPSCTAMGLE 134
Query: 115 RVGFTEYDTGQHENWTVQLTEP 136
F NWT +LTE
Sbjct: 135 ERSFRTVKIENRNNWTTRLTET 156
Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAE---G 80
G +CN T + + A+G G W + GWW + + C + +L +Y+YAE
Sbjct: 229 GMTICNRTPHRMWTAIGRRRGNG-WESRGWWSLDSDACARTIDESLIPTPHYVYAEIETD 287
Query: 81 VSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGF 118
+ C+ + +F IV + C R Y F
Sbjct: 288 EGMRHLKVADHIFCIARSKFAIVGREGCEVRAYKEADF 325
>gi|304320367|ref|YP_003854010.1| hypothetical protein PB2503_03967 [Parvularcula bermudensis
HTCC2503]
gi|303299269|gb|ADM08868.1| hypothetical protein PB2503_03967 [Parvularcula bermudensis
HTCC2503]
Length = 358
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 11/134 (8%)
Query: 2 LRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC 61
L FL+C F + + A + CN T + A+GY + +T GWW++ C
Sbjct: 19 LVGFLLCAP-----FLVSSAHAQYSFCNKTSYALSAAIGYVDDEDL-VTRGWWRLRSGQC 72
Query: 62 ETVVKGALHSRYYYLYAEGVSHSEH----WAGNVQMCVGQDE-FNIVDIKNCYTRGYLRV 116
+ V+ + Y++YAE + W+G +CV D F + D +C + +
Sbjct: 73 KRVLSDRVQPGRYFVYAEAIPGHRGELRTWSGETPLCVQNDSLFTLRDQNSCTSDPRRQR 132
Query: 117 GFTEYDTGQHENWT 130
F D + + T
Sbjct: 133 RFLPVDVDESTDGT 146
Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 4/122 (3%)
Query: 18 SNVSFAGFRVCNGTKNLIGVAVGYPAVKGG-WMTEGWWQIPGNTCETVVKGALHSRYYYL 76
S S GF CN T + A P + + + GWW++ C V +G++ + +Y+
Sbjct: 222 STDSNRGFVFCNATMLPVWAAFAQPDSQSEEYTSSGWWRLESQDCAKVRRGSVENENFYV 281
Query: 77 YAEGVSHS---EHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQL 133
Y + G+ C+ +F C GY F + + WT Q
Sbjct: 282 YGVMEADGRSVPLAGGDTSFCISTVQFEAPGDAPCEELGYETANFRRVEATNSKAWTFQF 341
Query: 134 TE 135
T
Sbjct: 342 TP 343
>gi|99081727|ref|YP_613881.1| integral membrane protein-like [Ruegeria sp. TM1040]
gi|99038007|gb|ABF64619.1| integral membrane protein-like protein [Ruegeria sp. TM1040]
Length = 357
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 18 SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLY 77
+ A +CN T VA+G+ G W ++GWW +P +C V+ A SR+YYL
Sbjct: 19 PSAGQAALDLCNDTTAAQRVAIGFQEA-GDWTSKGWWDLPAGSCTEVLSSASTSRFYYLR 77
Query: 78 AEGVSHSEHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT-GQHENWTVQL 133
E +E WA + CV +F I C RG+ + F DT G
Sbjct: 78 VE----TEGWAFTDDRLGFCVADTDFEIKGEDGCARRGFRQENFARIDTRGAAAPDPTAQ 133
Query: 134 TEPAQD 139
T PA D
Sbjct: 134 TRPAAD 139
>gi|56751047|ref|YP_171748.1| protease [Synechococcus elongatus PCC 6301]
gi|56686006|dbj|BAD79228.1| protease [Synechococcus elongatus PCC 6301]
Length = 316
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVK-GGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGV 81
AG+ VCN + + VA+ Y + +EGWW + + C+ Y++AE
Sbjct: 202 AGYEVCNQSGENLSVAIAYFDTSIDSYRSEGWWNLDQSKCQFFPNLLDSVDEVYVFAE-- 259
Query: 82 SHSEHWAGNVQMCVGQDEFNIVDI--KNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
S W+G+ C+ +D F D C + Y + GF + + G + WT LT P+Q
Sbjct: 260 SDQTLWSGDFPFCMQEDAFEYPDANRDRCPSPAYSK-GFLKVEVGDAKTWTTNLT-PSQ 316
>gi|81299292|ref|YP_399500.1| protease [Synechococcus elongatus PCC 7942]
gi|81168173|gb|ABB56513.1| protease [Synechococcus elongatus PCC 7942]
Length = 371
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 23 AGFRVCNGTKNLIGVAVGYPAVK-GGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGV 81
AG+ VCN + + VA+ Y + +EGWW + + C+ Y++AE
Sbjct: 257 AGYEVCNQSGENLSVAIAYFDTSIDSYRSEGWWNLDQSKCQFFPNLLDSVDEVYVFAE-- 314
Query: 82 SHSEHWAGNVQMCVGQDEFNIVDI--KNCYTRGYLRVGFTEYDTGQHENWTVQLTEPAQ 138
S W+G+ C+ +D F+ D C + Y + GF + + G + WT LT P+Q
Sbjct: 315 SDQTLWSGDFPFCMQEDAFDYPDANRDRCPSPAYSK-GFLKVEVGDAKTWTTNLT-PSQ 371
>gi|90422333|ref|YP_530703.1| hypothetical protein RPC_0813 [Rhodopseudomonas palustris BisB18]
gi|90104347|gb|ABD86384.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 347
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 55/139 (39%), Gaps = 16/139 (11%)
Query: 10 CFGAMIFCSN-VSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC-ETVVKG 67
F AMI S G CN T + I AVG K + GW++I C V G
Sbjct: 213 LFDAMIKAVEAPSSTGLTWCNDTPHKIMAAVGSDDGKA-VTSRGWYRIDPGKCLHPDVSG 271
Query: 68 ALHSRYYYLYAEGVSHSEH----------WAGNVQMCVGQDEFNIVDIKNCYTRGYLRVG 117
+ Y +AE V+ W G V +C +F I D +C RG+ R G
Sbjct: 272 --QPKQLYSFAEAVNADNRAVKIKDKPLSWGGGVMLCTRDSKFEINDQHDCAARGFNRTG 329
Query: 118 FTEYDTGQHENWTVQLTEP 136
FT D T++ T P
Sbjct: 330 FTSVDLSSGGK-TLRFTLP 347
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 7/125 (5%)
Query: 9 FCFGAMIFCS-NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG 67
F + + ++A ++CN ++ A+G K + GW++I C VV+G
Sbjct: 23 FGLALLALSAITPAYADLKLCNRMSYVVEAAIGIDD-KASTASRGWFRIDPAQCRVVVQG 81
Query: 68 ALHSRYYYLYAEGV----SHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDT 123
L + L+A + + G+ ++C+ D F I + C + G FTE
Sbjct: 82 TLTADRILLHARALGVYGASPVPQNGSDRLCIAPDNFVIAAARQCRS-GQTAAPFTEIKP 140
Query: 124 GQHEN 128
++
Sbjct: 141 TATDD 145
>gi|27383213|ref|NP_774742.1| hypothetical protein blr8102 [Bradyrhizobium japonicum USDA 110]
gi|27356387|dbj|BAC53367.1| blr8102 [Bradyrhizobium japonicum USDA 110]
Length = 390
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
Query: 4 SFLICFCFGAM--IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC 61
FL+ A+ +F S +FA ++CN ++ A+G K T GW++I TC
Sbjct: 60 RFLMTLPAAAVSFVFSSAPAFADLKICNRMSYVVEAAIGIDD-KAATATRGWFRIDPATC 118
Query: 62 ETVVKGALHSRYYYLYAEGV----SHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVG 117
VV+G L + L A + + GN +CV QD F I + C + G +V
Sbjct: 119 RVVVQGTLTADRILLNARALGVYGASPIPQNGNDMLCVAQDNFVIAAARQCRS-GQTQVP 177
Query: 118 FTEYDTGQHEN 128
FT+ Q ++
Sbjct: 178 FTQVTPTQGDD 188
Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 14/115 (12%)
Query: 19 NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC-ETVVKGALHSRYYYLY 77
S +G CN T + + A+ K + GW++I C V G + + +
Sbjct: 266 TPSPSGLTWCNDTPHKVMAAIATDDGK-SVTSRGWYRIDPGKCLHPDVSG--QPKQIFSF 322
Query: 78 AEGVSHSEH----------WAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYD 122
AE V W G Q+C + +F V+ +C RG+ GF D
Sbjct: 323 AEAVDADNRAVKLKDKPLNWGGEKQLCTRETKFETVEQTDCGARGFAATGFGAVD 377
>gi|126739223|ref|ZP_01754917.1| hypothetical protein RSK20926_22524 [Roseobacter sp. SK209-2-6]
gi|126719840|gb|EBA16548.1| hypothetical protein RSK20926_22524 [Roseobacter sp. SK209-2-6]
Length = 342
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 9/131 (6%)
Query: 2 LRSFLICFCFGAMIFC-SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
+ L+ F F + ++AG +CN T ++V + +G W +EGWWQ+
Sbjct: 4 RKGRLLFIPFVLFYFAFTLPAWAGLEICNDTAVRQSLSVAFQT-EGEWQSEGWWQLEPQD 62
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVG 117
C ++ R YY A+ S W + C G F+I + ++C G+ +
Sbjct: 63 CVAPLQDETDQRIYYYLAQ----SPGWIFAHDRIAFCTGAAAFSIRNTQDCEGLGFEKEY 118
Query: 118 FTEYDTGQHEN 128
F + D + +
Sbjct: 119 FAKIDVTKLPD 129
>gi|115522675|ref|YP_779586.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
palustris BisA53]
gi|115516622|gb|ABJ04606.1| Peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
BisA53]
Length = 333
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 47/126 (37%), Gaps = 15/126 (11%)
Query: 10 CFGAMIFCS-NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC-ETVVKG 67
F MI S G CN T + I AV K + GW+++ C V G
Sbjct: 199 LFDTMIKAVQAPSPTGLTWCNDTPHKIMAAVASDDGKT-VTSRGWYRVDPGKCLHPDVSG 257
Query: 68 ALHSRYYYLYAEGVSHSEH----------WAGNVQMCVGQDEFNIVDIKNCYTRGYLRVG 117
R Y +AE V + W GNV +C + +F I D +C RG G
Sbjct: 258 --QPRQIYSFAEAVDANNRALKLKDKPLNWGGNVTLCTRESKFEINDQGDCVARGLNPTG 315
Query: 118 FTEYDT 123
F D
Sbjct: 316 FAPVDI 321
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 7/133 (5%)
Query: 1 MLRSFLICFCFGAMIFC-SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN 59
M + + + + A ++CN ++ A+G K T GW+++
Sbjct: 1 MRLALRKASLAVLLALGITTPAHADLKLCNRMSYVVEAAIGIDD-KASTATRGWFRLDPA 59
Query: 60 TCETVVKGALHSRYYYLYAEGV----SHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLR 115
C V +G L + L+A + + G ++C+ D F I + C G +
Sbjct: 60 QCRVVAQGTLSADRLLLHARALGVYGASPVPQDGTDRLCIAPDNFVIAAARQCRG-GQTQ 118
Query: 116 VGFTEYDTGQHEN 128
FTE E+
Sbjct: 119 APFTEIKPSPTED 131
>gi|114797989|ref|YP_759149.1| hypothetical protein HNE_0419 [Hyphomonas neptunium ATCC 15444]
gi|114738163|gb|ABI76288.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 343
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 8/142 (5%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAG--FRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPG 58
LR ++ A++ + G +++CN T +I AVG+ G + EGW ++
Sbjct: 7 FLRIVVLAIASLAVLLLPAEAQEGEGWKLCNRTSFVIEAAVGHQQGAGITV-EGWTKLHP 65
Query: 59 NTCETVVKGALHSRYYYLYAEGVS----HSEHWAGNVQMCVGQDE-FNIVDIKNCYTRGY 113
C + G L + +YLY + W G ++CV F++ +C G
Sbjct: 66 GACRIALPGPLKAGVHYLYGRTSTAHLGGGREWGGRQELCVDPTGGFSLESPPDCAAMGL 125
Query: 114 LRVGFTEYDTGQHENWTVQLTE 135
GF D + +WT TE
Sbjct: 126 EAQGFRPVDITKDGSWTNLFTE 147
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAE---G 80
GF +CN TKN I A+ + +G W + GWW+I C V+ L +++YAE G
Sbjct: 221 GFTLCNRTKNRIWSAISRRSPEG-WESRGWWRIEAGGCARVIDRPLRGSEHFVYAEMEDG 279
Query: 81 VSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTE 120
+ CVG+ +F I ++C Y FT
Sbjct: 280 AQLRTLANADEAFCVGRSKFAISGREDCEDSAYRTALFTR 319
>gi|86747805|ref|YP_484301.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
palustris HaA2]
gi|86570833|gb|ABD05390.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris HaA2]
Length = 318
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
+ + A ++CN +I A+G K T GW++I C V++GAL +
Sbjct: 1 MALPTTAHADLKICNRMSYVIEAAIGIDD-KATTATRGWFRIDPARCRVVLQGALTADRV 59
Query: 75 YLYAEGVSHSE----HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWT 130
L+A ++ G +CV QD F I + C + G FTE Q E+
Sbjct: 60 MLHARSLAVYGASPVPQNGTDPLCVAQDNFVIAAARQCRS-GQTLAAFTEIRPAQTEDGV 118
Query: 131 V 131
+
Sbjct: 119 M 119
Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 51/140 (36%), Gaps = 18/140 (12%)
Query: 10 CFGAMIFCSN-VSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGA 68
F MI S G CN TK I AVG K + GW++I C ++
Sbjct: 184 FFDTMIKAVEAPSGTGLTWCNDTKAKIMAAVGEDDGKTI-SSRGWYRIEPGKC---LRPD 239
Query: 69 L--HSRYYYLYAEGVSHSEH----------WAGNVQMCVGQDEFNIVDIKNCYTRGYLRV 116
L + + +AE V + W G +C +F I + +C RG
Sbjct: 240 LGAQPKRVFSFAEAVDDNARPILLKGKPLNWGGATLLCTRDSKFEISEQGDCSARGLNAT 299
Query: 117 GFTEYDTGQHENWTVQLTEP 136
GF D T++ T P
Sbjct: 300 GFAPADLSGGSR-TLRFTTP 318
>gi|91974555|ref|YP_567214.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
palustris BisB5]
gi|91681011|gb|ABE37313.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris BisB5]
Length = 384
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVV 65
L A + + + A ++CN +I A+G K T GW +I C V+
Sbjct: 58 LFVATLLASLAGNTAAHADLKLCNRMSYVIETAIGIDD-KATTATRGWLRIDPAQCRVVL 116
Query: 66 KGALHSRYYYLYAEGVSHSE----HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEY 121
+GAL + L+A ++ G ++C+ + F I + C + G FTE
Sbjct: 117 QGALSADRVMLHARALAVYGASPIPQNGTDRLCITPENFVIAAARQCRS-GQTLAPFTEI 175
Query: 122 DTGQHEN 128
Q ++
Sbjct: 176 KPTQQDD 182
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 52/140 (37%), Gaps = 18/140 (12%)
Query: 10 CFGAMIFCSNVSFA-GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGA 68
F MI A G CN T++ I A+ K + GW++I C ++
Sbjct: 250 FFDTMIKAVESPSATGLTWCNDTRSRIMAAIAEDDGKTI-TSRGWYRIEPGKC---LRPD 305
Query: 69 LHS--RYYYLYAEGVSHSEH----------WAGNVQMCVGQDEFNIVDIKNCYTRGYLRV 116
L + + + +AE V + W G +C + +F I + +C RG
Sbjct: 306 LSALPKRVFSFAEAVDGNARPITLKDKPLNWGGATLLCTRESKFEISEQGDCSARGLNAT 365
Query: 117 GFTEYDTGQHENWTVQLTEP 136
GF D TV+ P
Sbjct: 366 GFAPVDLSGGGK-TVRFATP 384
>gi|148258515|ref|YP_001243100.1| hypothetical protein BBta_7330 [Bradyrhizobium sp. BTAi1]
gi|146410688|gb|ABQ39194.1| hypothetical protein BBta_7330 [Bradyrhizobium sp. BTAi1]
Length = 372
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 9/140 (6%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVV 65
L ++ + + A ++CN ++ A+G K T GW+++ TC V+
Sbjct: 45 LALAVILPLLTFTTPARADLKLCNRMSYVVEAAIGI-DEKAATATRGWFRLDPATCRVVL 103
Query: 66 KGALHSRYYYLYAEGVSHSE----HWAGNVQMCVG-QDEFNIVDIKNCYTRGYLRVGFTE 120
+GA+ + L+A +S GN Q+CV D F I + C G FT+
Sbjct: 104 QGAMTAERILLHARALSLYGASPIAANGNDQLCVATTDNFVIAAARQCRA-GQTPAAFTQ 162
Query: 121 YDTGQHENW--TVQLTEPAQ 138
+ ++ T L E A+
Sbjct: 163 VTPTKSDDGSLTAYLAESAE 182
Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 14/129 (10%)
Query: 8 CFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC-ETVVK 66
F + S G CN T + + AV + ++ GW++I C +
Sbjct: 237 TFFATMVDAVQTPSPTGLTWCNDTPHKVMAAVATDDGRT-VVSRGWYRIDAGKCLHPDIT 295
Query: 67 GALHSRYYYLYAEGVSHSEH----------WAGNVQMCVGQDEFNIVDIKNCYTRGYLRV 116
G + Y +AE V W G VQ+C +++F + +C +RG+
Sbjct: 296 G--QPKKVYSFAEAVDDENRTIKLKNKPLNWGGLVQLCTRENKFETTEQGDCPSRGFTAT 353
Query: 117 GFTEYDTGQ 125
GFT D +
Sbjct: 354 GFTAVDITR 362
>gi|192289062|ref|YP_001989667.1| hypothetical protein Rpal_0632 [Rhodopseudomonas palustris TIE-1]
gi|192282811|gb|ACE99191.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 339
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVV 65
+ ++ + A ++CN ++ A+G G + GW +I C VV
Sbjct: 14 RALATIVTTLSLTSAAHADLKLCNRMSYVVETAIGV-DSNGTTASRGWLRIDPAQCRVVV 72
Query: 66 KGALHSRYYYLYAEGVSHSE----HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEY 121
+GAL++ L A + G ++C+ +D F I + C G FTE
Sbjct: 73 QGALNADRIMLNARALPVYGVSPLPQNGTDRLCIAEDNFVIAAARQCRG-GQTLAAFTEI 131
Query: 122 DTGQHEN 128
E+
Sbjct: 132 KPTDTED 138
Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 19/140 (13%)
Query: 10 CFGAMIFCSN-VSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGA 68
F MI S +G CN TK I AV K + GW+ + C ++
Sbjct: 206 FFDVMIKAVQQPSGSGLTWCNDTKYKIMAAVAEDDGKTI-TSRGWYGVAPGQC---LRPD 261
Query: 69 L--HSRYYYLYAEGVSHSEH----------WAGNVQMCVGQDEFNIVDIKNCYTRGYLRV 116
L + + +AE V S W G +C +F + + +C RG
Sbjct: 262 LGAQPKRVFSFAEAVDSSGRPVTIKGRALNWGGGTTLCTRDSKFELGEQGDCAARGLAAT 321
Query: 117 GFTEYDTGQHENWTVQLTEP 136
GF D + T++L+ P
Sbjct: 322 GFAAIDLSSGK--TLRLSAP 339
>gi|316932096|ref|YP_004107078.1| hypothetical protein Rpdx1_0708 [Rhodopseudomonas palustris DX-1]
gi|315599810|gb|ADU42345.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
DX-1]
Length = 339
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVV 65
F + ++ + A ++CN ++ A+G G T GW +I C V+
Sbjct: 14 RALATFVTTLALTSAAHADLKLCNRMSYVVEAAIGV-DSSGATATRGWLRIDPAQCRVVL 72
Query: 66 KGALHSRYYYLYAEGVSHSE----HWAGNVQMCVGQDEFNIVDIKNCYTRG-YLRVGFTE 120
+GAL++ L A + G ++CV +D F I + C RG FTE
Sbjct: 73 QGALNADKIMLNARVLPLYGASPLPQNGTDRLCVAEDNFVIAAARQC--RGSQTLAAFTE 130
Query: 121 YDTGQHEN 128
E+
Sbjct: 131 IKPTDTED 138
Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 10 CFGAMIFCSN-VSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGA 68
F +I S G CN T+ I AV K + GW+ I C+ G
Sbjct: 206 FFDVIIKAVQQPSGGGLTWCNDTRYKIMAAVAEDDGKTI-TSRGWYGIAPGQCQRPDLGT 264
Query: 69 LHSRYYYLYAEGVSHSEH----------WAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGF 118
+ + +AE V S W G +C +F I + +C RG GF
Sbjct: 265 -QPKRVFSFAEAVDGSGRPVSIKGRALNWGGGTLLCTRDSKFEIGEQGDCAGRGLTATGF 323
Query: 119 TEYDTGQHENWTVQLTEP 136
D + ++ T P
Sbjct: 324 AAVDLSDGK--PLRFTAP 339
>gi|39933705|ref|NP_945981.1| hypothetical protein RPA0628 [Rhodopseudomonas palustris CGA009]
gi|39647551|emb|CAE26072.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 373
Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVV 65
+ ++ + A ++CN ++ A+G G + GW +I C VV
Sbjct: 48 RALATIVTTLSLTSAAHADLKLCNRMSYVVETAIGV-DSNGTTASRGWLRIDPAQCRVVV 106
Query: 66 KGALHSRYYYLYAEGVSHSE----HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEY 121
+GAL++ L A + G ++C+ +D F I + C G FTE
Sbjct: 107 QGALNADRIMLNARALPVYGVSPLPQNGTDRLCIAEDNFVIAAARQCRG-GQTLAAFTEI 165
Query: 122 DTGQHEN 128
E+
Sbjct: 166 KPTDTED 172
Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 19/140 (13%)
Query: 10 CFGAMIFCSN-VSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGA 68
F MI S +G CN TK I AV K + GW+ + C ++
Sbjct: 240 FFDVMIKAVQQPSGSGLTWCNDTKYKIMAAVAEDDGKTI-TSRGWYGVAPGQC---LRPD 295
Query: 69 L--HSRYYYLYAEGVSHSEH----------WAGNVQMCVGQDEFNIVDIKNCYTRGYLRV 116
L + + +AE V S W G +C +F + + +C RG
Sbjct: 296 LGAQPKRVFSFAEAVDSSGRPVTIKGRALNWGGGTTLCTRDSKFELGEQGDCAARGLAAT 355
Query: 117 GFTEYDTGQHENWTVQLTEP 136
GF D + T++L+ P
Sbjct: 356 GFAAIDLSSGK--TLRLSAP 373
>gi|146337892|ref|YP_001202940.1| hypothetical protein BRADO0777 [Bradyrhizobium sp. ORS278]
gi|146190698|emb|CAL74702.1| conserved hypothetical protein; Putative peptidoglycan-binding
domain-containing protein [Bradyrhizobium sp. ORS278]
Length = 355
Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 19 NVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYA 78
+ A ++CN ++ A+G K T GW+++ TC V++G + + L+A
Sbjct: 41 TPARADLKLCNRMSYVVEAAIGI-DEKAATATRGWFRLDPATCRVVLQGTMTADRILLHA 99
Query: 79 EGVSHSE----HWAGNVQMCV-GQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTV 131
+S GN Q+CV D F I + C T G FT+ + ++ T+
Sbjct: 100 RALSLYGASPMAENGNDQLCVAASDNFVIAAARQCRT-GQTPAAFTQVTPTKTDDGTL 156
Score = 94.6 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 14/130 (10%)
Query: 7 ICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC-ETVV 65
F + S G CN T + + AVG + ++ GW++I C +
Sbjct: 219 PSFFATMVDAVQTPSPVGLTWCNDTPHKVMAAVGTDDGRT-VVSRGWYRIDAGKCLHPDI 277
Query: 66 KGALHSRYYYLYAEGVSHSEH----------WAGNVQMCVGQDEFNIVDIKNCYTRGYLR 115
G + Y +AE V W G VQ+C +++F + +C +RG+
Sbjct: 278 TG--QPKKVYSFAEAVDDDNRTIKLKNKPLNWGGLVQLCTRENKFETTEQGDCPSRGFTA 335
Query: 116 VGFTEYDTGQ 125
GFT D +
Sbjct: 336 TGFTAVDITR 345
>gi|114569007|ref|YP_755687.1| peptidoglycan binding domain-containing protein [Maricaulis maris
MCS10]
gi|114339469|gb|ABI64749.1| peptidoglycan-binding domain 1 [Maricaulis maris MCS10]
Length = 331
Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 16/122 (13%)
Query: 21 SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEG 80
+ +G +CN I VA+G+ W + GWW+I C V+ L + + YAE
Sbjct: 209 AASGLTMCNEADGDIAVAIGHQVG-SIWQSRGWWRIHAGECARVLATRLATDNAFYYAER 267
Query: 81 VSHSEHWA---GNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPA 137
++ G C F +C RGY F TEP+
Sbjct: 268 INTGTRRGLTEGRESFCTAPARFVAEGRGDCPDRGYTAANFRRI------------TEPS 315
Query: 138 QD 139
+
Sbjct: 316 EG 317
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 26 RVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG-ALHSRY-YYLYAEG--- 80
+CN T ++ A G+P V+GG EGW ++ C TV L + YA+
Sbjct: 27 ELCNETSYIVEAAAGWP-VEGGVAIEGWTRLRPGDCATVASDVDLDGDQPIFFYAKSSIA 85
Query: 81 -VSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEP 136
+ W G + +CV + +F +V C + G F G+ TV L EP
Sbjct: 86 YLGGVREWRGTIPLCVDEADFEVVANTRCSSLGMASRDFF-IREGEDRERTV-LVEP 140
>gi|254465438|ref|ZP_05078849.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206686346|gb|EDZ46828.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 334
Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 7/124 (5%)
Query: 18 SNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLY 77
+ + AG +CN T L +AV G W+T+GW + C + R++Y
Sbjct: 18 PSAASAGTSICNDTGALHQLAVTART-DGSWITQGWQALAPGDCVDPLPEGYEGRFFYFR 76
Query: 78 AEGVSHSEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGF--TEYDTGQHENWTVQLTE 135
AE H +++ C F +C RGY F T T+ L+
Sbjct: 77 AESPGHQFR-DDSIRFCTKAGPFRAGGSGDCDARGYREQAFARARISTDSQ---TIALSS 132
Query: 136 PAQD 139
+Q
Sbjct: 133 RSQA 136
>gi|300868070|ref|ZP_07112707.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300333908|emb|CBN57885.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 146
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 10/137 (7%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
M + +++F + + A VCN + VA+ Y + W ++GW Q+ +
Sbjct: 8 MAVGLGMVGFISSVVFAT-PANASMTVCNRAGSKAFVAISYYSDGNFW-SKGWLQLNPGS 65
Query: 61 CETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCV----GQDEFNIVDIKN---CYTRGY 113
C T + G + + +YAE +G+V+ CV Q + I + N C +G
Sbjct: 66 CGTAIAGRVSNAEIGVYAE-TFTGIVESGDVRRCVVWVQVQPSWTIRNADNPARCKGKGR 124
Query: 114 LRVGFTEYDTGQHENWT 130
GF T ++T
Sbjct: 125 EMKGFRVIKTNDSPDYT 141
>gi|83859291|ref|ZP_00952812.1| hypothetical protein OA2633_12840 [Oceanicaulis alexandrii
HTCC2633]
gi|83852738|gb|EAP90591.1| hypothetical protein OA2633_12840 [Oceanicaulis alexandrii
HTCC2633]
Length = 325
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSH 83
G +VCN +GVAV A G + T GWW+I C + L S Y+YA+ +
Sbjct: 204 GLQVCNDANLPMGVAVARAAGDG-YETRGWWRIAPGGCAQTLSAQLTSNETYVYAQLIDA 262
Query: 84 S---EHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFT 119
G C+ F C G+ F
Sbjct: 263 DALRPLAGGTEAFCITPARFTSQTRSECTNSGFQPALFR 301
Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 54/141 (38%), Gaps = 18/141 (12%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNT 60
ML LI F A+ F S + AG +VCN T ++ A + G EGW +I
Sbjct: 1 MLNRILIA-AFIALGF-SGAAQAG-QVCNETSFMVEAAKAWRTPTGL-AVEGWARIAPGG 56
Query: 61 CETVVKGALHSRYYYLYAEGVSHSE--HWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGF 118
C + +Y Y W G++ +CV + +F + +C T G F
Sbjct: 57 CAEIGPSTSSDQYLYARTTRAYLGGVREWRGSLDICVDETDFAFEGVADCETLGLETRKF 116
Query: 119 TEYDTGQHENWTVQLTEPAQD 139
QLT+ +D
Sbjct: 117 R------------QLTDAERD 125
>gi|218515008|ref|ZP_03511848.1| hypothetical protein Retl8_15604 [Rhizobium etli 8C-3]
Length = 72
Score = 73.8 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN 59
++R L F ++ + A FRVCNGT+NL+GVA+GY A G W+TEGWWQ+P
Sbjct: 15 LVRLALFALAAFMPFFIADAARADFRVCNGTQNLVGVAIGYRAKDG-WVTEGWWQVPAT 72
>gi|254788098|ref|YP_003075527.1| hypothetical protein TERTU_4266 [Teredinibacter turnerae T7901]
gi|237683978|gb|ACR11242.1| hypothetical protein TERTU_4266 [Teredinibacter turnerae T7901]
Length = 428
Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 22/148 (14%)
Query: 1 MLRSFLICFCFG-AMIFCSNVSFAG-FRVCNGTKNLIGVA-VGYPAVKGGWMTEGWWQIP 57
+LR+ I ++ + + A ++CN T I VA V + W +GW++
Sbjct: 4 LLRTCTILVGLAVSLCITAQPAHADSAKICNRTPFPIFVAYVHFSQDSAKWEKQGWYRTL 63
Query: 58 GNTCETVVKGALHSRYYYLYAEGVS----------HSEHWAGN-----VQMCVGQDEFNI 102
C T A ++ +YY +AE + S +W G + CV F
Sbjct: 64 PGDCTT--TRASNADFYYYFAEADTNDIVAKNLNKTSSYWGGGKEENALSFCVTHKAFT- 120
Query: 103 VDIKNCYTRGYLRVGFTEYDTGQHENWT 130
+C V F D G + T
Sbjct: 121 KFTDDCTDMP-RTVTFARRDMGGTQELT 147
>gi|260762500|ref|ZP_05874837.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260672926|gb|EEX59747.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
Length = 52
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 99 EFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTE 135
EF I +++C+ RG+ R GF EYDTG+ +W VQLT+
Sbjct: 1 EFRITGVQDCFARGFQRNGFQEYDTGEQSSWMVQLTD 37
>gi|312878925|ref|ZP_07738725.1| protein of unknown function DUF1036 [Aminomonas paucivorans DSM
12260]
gi|310782216|gb|EFQ22614.1| protein of unknown function DUF1036 [Aminomonas paucivorans DSM
12260]
Length = 169
Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 21 SFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEG 80
+ +V N + + VAV Y + W+TEGWW T+ +RY Y+YAEG
Sbjct: 24 ASVPIQVSNRSGQTLSVAVHYLNPQKQWVTEGWWVFEPGELSTLKGIETTNRYLYVYAEG 83
Query: 81 VSHSEHWAGN-----VQMCVGQDEFNIVD 104
W G V + V +F +
Sbjct: 84 TD-DAVWDGRGEKDAVTLWVVDGKFKTLG 111
>gi|282858029|ref|ZP_06267228.1| hypothetical protein HMPREF7215_0787 [Pyramidobacter piscolens
W5455]
gi|282584137|gb|EFB89506.1| hypothetical protein HMPREF7215_0787 [Pyramidobacter piscolens
W5455]
Length = 144
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 39/144 (27%), Gaps = 13/144 (9%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFA----GFRVCNGTKNLIGVAVG-YPAVKGGWMTEGWWQ 55
M ++ A F V N I VA+ Y W T GW
Sbjct: 1 MKKNLRFFLALTLFCPLVLPRQAAALEKFTVVNKNPAPIFVAISWYDDPSARWKTMGWAA 60
Query: 56 IPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQ------MCVGQDEFNIVDIKNCY 109
I V + YAE W G V + F + + C
Sbjct: 61 IDPGK-SAVYNLKSSIDVIFYYAEETGMKHTWDGEDMAGAQVRF-VRAEGFAYSEDQACP 118
Query: 110 TRGYLRVGFTEYDTGQHENWTVQL 133
V F D G E +T+ L
Sbjct: 119 GNNRRVVVFRPLDVGDSEEYTLTL 142
>gi|312878924|ref|ZP_07738724.1| protein of unknown function DUF1036 [Aminomonas paucivorans DSM
12260]
gi|310782215|gb|EFQ22613.1| protein of unknown function DUF1036 [Aminomonas paucivorans DSM
12260]
Length = 142
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 29 NGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWA 88
N + + VAV Y + W+TEGWW T+ +RY Y+YAEG W
Sbjct: 32 NRSGQTLSVAVHYLNPQKQWVTEGWWVFEPGELSTLKGIETTNRYLYVYAEGTD-DAVWD 90
Query: 89 GN-----VQMCVGQDEFNIVD 104
G V + V +F +
Sbjct: 91 GRGEKDAVTLWVVDGKFRTLG 111
>gi|316933374|ref|YP_004108356.1| hypothetical protein Rpdx1_2014 [Rhodopseudomonas palustris DX-1]
gi|315601088|gb|ADU43623.1| protein of unknown function DUF1036 [Rhodopseudomonas palustris
DX-1]
Length = 145
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 9/126 (7%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFA-GFRVCNGTKNLIGVAVGYPAV-KGGWMTEGWWQIPG 58
M+ L+ G + N +CN T L+ + +P K WM GW+QI
Sbjct: 8 MVAGILLSLGAGTAVHAQNTDSTFNLTICNKTSTLVRMMFFHPEGVKDMWMLSGWYQIKP 67
Query: 59 NTCETVVKGALHSRYYYLYA-EGVSHSEHWAG-NVQMCVGQDEF--NIVDIKNCYTRGYL 114
++C T L Y+Y +A + W G +C + + C G
Sbjct: 68 SSCSTF--EQLPRGYFYWFAKQDGEMGLVWEGTKRHLCTSTRATWRKVFPNEQCLV-GET 124
Query: 115 RVGFTE 120
GF+E
Sbjct: 125 NRGFSE 130
>gi|166367587|ref|YP_001659860.1| hypothetical protein MAE_48460 [Microcystis aeruginosa NIES-843]
gi|166089960|dbj|BAG04668.1| unknown protein [Microcystis aeruginosa NIES-843]
Length = 389
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 43/134 (32%), Gaps = 19/134 (14%)
Query: 8 CFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKG 67
+++ + + FR N + +A+ + + G W T+ W+ +
Sbjct: 31 SLPHKSILLAQSSNTISFR--NACSSPFRLAIHFKNLSGQWETKAWYSFSPGEQSRLNGV 88
Query: 68 ALHSRYYYLYAEGVSHSEH-WAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQH 126
+RY + YAE S W+ I ++D G
Sbjct: 89 DTRNRYLFYYAEATDGSGKVWS------SNDTSQTIGG---------RTYNMKKFDIGSQ 133
Query: 127 -ENWTVQLTEPAQD 139
NWT LT P Q
Sbjct: 134 VVNWTQTLTCPDQQ 147
>gi|255264743|ref|ZP_05344085.1| hypothetical protein TR2A62_1289 [Thalassiobium sp. R2A62]
gi|255107078|gb|EET49752.1| hypothetical protein TR2A62_1289 [Thalassiobium sp. R2A62]
Length = 159
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 11/118 (9%)
Query: 25 FRVCNGTKNLIGVAVGYPAV-KGGWMTEGWWQIPGNTCETVVK---GALHSRYYYLYAEG 80
F VCN + I +A+ + + +GWW + + C + + G ++++ Y +A+
Sbjct: 43 FNVCNKSGEQIRIAIAVREAAEDPFTVKGWWIVEHDDCSYMSRTPFGDFNNQHLYYHAK- 101
Query: 81 VSHSEHWAGNVQ--MCVGQDEFN--IVDIKNCYTRGYLRVGFTEYDTGQ-HENWTVQL 133
+W GN C+ F + D C + F E + +T+ +
Sbjct: 102 TGGGSYWDGNAATKFCIPNRRFERLVPDGYTCASD-EDTAPFGEITVPRTQREYTLTI 158
>gi|126658307|ref|ZP_01729457.1| hypothetical protein CY0110_12947 [Cyanothece sp. CCY0110]
gi|126620456|gb|EAZ91175.1| hypothetical protein CY0110_12947 [Cyanothece sp. CCY0110]
Length = 151
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 14/106 (13%)
Query: 10 CFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGAL 69
G F ++ A +CN ++ V+ Y W+++GWW + C
Sbjct: 17 ALGEFAFSPKMAQAS-ELCNYRNEIVRVSGAYLNQDEVWVSKGWWLVEPGECMVYPDDW- 74
Query: 70 HSRYYYL---YAEGVSHS------EHWAGNVQMCVGQDEFNIVDIK 106
Y Y+ A+ V + E +Q+CV QD + + +
Sbjct: 75 ---YTYVEVDRAQTVERTYLLNLEEEEVQTIQLCVLQDRYTFYNAE 117
>gi|172035411|ref|YP_001801912.1| hypothetical protein cce_0495 [Cyanothece sp. ATCC 51142]
gi|171696865|gb|ACB49846.1| hypothetical protein cce_0495 [Cyanothece sp. ATCC 51142]
Length = 157
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 16/112 (14%)
Query: 5 FLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC--- 61
++ G + + A +CN +I V+ Y W+T+GWW + C
Sbjct: 18 IVMGAGLGELALSPERAQAS-ELCNYRNEIIRVSGAYINGDDTWVTQGWWLVEPGECMVY 76
Query: 62 -------ETVVKGALHSRYYYLYAEGVSHSEHWAGNVQMCVGQDEFNIVDIK 106
V + R Y L E V++CV QD + + +
Sbjct: 77 PDNWYTYVQVDRHQTVERTYLLELED-----EEIQTVELCVLQDRYTFYNGE 123
>gi|229035188|ref|ZP_04189125.1| hypothetical protein bcere0028_52070 [Bacillus cereus AH1271]
gi|228728136|gb|EEL79175.1| hypothetical protein bcere0028_52070 [Bacillus cereus AH1271]
Length = 243
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 25 FRVCNGTKNLIGVAVGYPAVK---GGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGV 81
R N T + +A+ Y K W +GWWQIP N T + ++++ ++ +A
Sbjct: 3 LRFKNNTNLNLEIAIAYYDEKCTGSKWRKQGWWQIPSNGEITALSENVNNKKFFYFARST 62
Query: 82 SHSEHWAGNVQM---------CVGQDEFNIVDIKN 107
+++ W G++ C + I ++N
Sbjct: 63 NNAYIWNGDMTTYLPNEVFSRCWDETGGTIYGMRN 97
>gi|172055050|ref|YP_001806377.1| hypothetical protein cce_4965 [Cyanothece sp. ATCC 51142]
gi|171701331|gb|ACB54311.1| hypothetical protein cce_4965 [Cyanothece sp. ATCC 51142]
Length = 177
Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 29 NGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWA 88
N T + V V Y G W TEGW ++P + V A +RY YAE ++W
Sbjct: 77 NNTNEPLWVVVHYLGDYG-WTTEGWIEVPSRS--VVPVAATENRYILFYAEN-DQGKYWG 132
Query: 89 GNVQ--MC---VGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQLT 134
G++ +C + + + Y F E D G+ + T LT
Sbjct: 133 GDIPVEICNCAMRPNSASPYGE-------YYTEYFFEEDLGEQFS-TYTLT 175
>gi|16329725|ref|NP_440453.1| hypothetical protein sll1837 [Synechocystis sp. PCC 6803]
gi|1652209|dbj|BAA17133.1| sll1837 [Synechocystis sp. PCC 6803]
Length = 145
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 12/95 (12%)
Query: 15 IFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYY 74
+F + AG + CN + +A GY G W++EGWW + C S +
Sbjct: 22 VFAPTPAIAG-KSCNYLNTNLFMAQGYENPNGIWVSEGWWVVEPGECVVYSD----SAFT 76
Query: 75 YLYAEGVSHSEH-------WAGNVQMCVGQDEFNI 102
Y + ++++C D F +
Sbjct: 77 YFKISDGVAPNRKAIAEMAGSESIKLCQVNDRFTV 111
>gi|163757162|ref|ZP_02164264.1| hypothetical protein KAOT1_00815 [Kordia algicida OT-1]
gi|161322890|gb|EDP94237.1| hypothetical protein KAOT1_00815 [Kordia algicida OT-1]
Length = 565
Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 23/114 (20%)
Query: 25 FRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHS 84
+ N I V + Y W+++GWW I N +TV + +Y YA+
Sbjct: 197 LKFRNKCIKPIKVLIRYLDFNNKWVSKGWWTIDTN--KTVYVEDSPNSIFYYYAKTTDGK 254
Query: 85 EHWAGNVQMCVGQDEFNIVDIKNCYTRGYL--RVGFTEYDTGQHE--NWTVQLT 134
W+ N M R Y + GF + + + +W +T
Sbjct: 255 LVWSDNDNM-----------------RDYKGTKYGFRKLEKSNQDYGSWISNIT 291
>gi|271966827|ref|YP_003341023.1| hypothetical protein Sros_5525 [Streptosporangium roseum DSM 43021]
gi|270510002|gb|ACZ88280.1| hypothetical protein Sros_5525 [Streptosporangium roseum DSM 43021]
Length = 114
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 41/115 (35%), Gaps = 17/115 (14%)
Query: 29 NGTKNLIGVAVGYPAVKG-----GWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSH 83
N + + VA+ + + G W T GWW I V+ +RY YAE +
Sbjct: 7 NRYTSRVWVAIMFYSPDGCRDYGQWGTRGWWAIDPGGEAHVLN--TSNRYAAFYAEAAN- 63
Query: 84 SEHWAGNV-QMCVGQDEFNIVDIKNCYTRGYLRV---GFTEYDTGQHENWTVQLT 134
W G M V Q+ F +C G G D + + V LT
Sbjct: 64 GAVWTGPYGPMYVYQNAF-----DSCLNIGSTAARAVGTRLVDMNGYSRYYVNLT 113
>gi|73669693|ref|YP_305708.1| hypothetical protein Mbar_A2201 [Methanosarcina barkeri str.
Fusaro]
gi|72396855|gb|AAZ71128.1| hypothetical protein Mbar_A2201 [Methanosarcina barkeri str.
Fusaro]
Length = 111
Score = 51.1 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 29 NGTKNLIGVAV-----GYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSH 83
N T I VA+ G G W+ +GWW+I + + + G+ ++ Y+Y YAEG +
Sbjct: 8 NDTSFSIYVAIKRYNPGTCGGSGDWLVKGWWEIKPRSSQRI--GSTNNSYFYYYAEG--N 63
Query: 84 SEHWAGNVQMCVGQDEFNIVDIKNCYTRGYLRVGFTEYDTGQHENWTVQL 133
W G+ V Q F + T G RVG E + ++ +TV L
Sbjct: 64 GYTWGGDSISYVEQQAF---GHCDNSTLG-RRVGMREDNCNNYDTYTVSL 109
>gi|238060139|ref|ZP_04604848.1| hypothetical protein MCAG_01105 [Micromonospora sp. ATCC 39149]
gi|237881950|gb|EEP70778.1| hypothetical protein MCAG_01105 [Micromonospora sp. ATCC 39149]
Length = 113
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 42/114 (36%), Gaps = 18/114 (15%)
Query: 29 NGTKNLIGVAVGYPAVK-----GGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSH 83
N I VA+ Y W T GWW I T V+ ++RY Y YAE
Sbjct: 7 NSYGPRIWVAIMYYDTGCNSYGSPWATRGWWAIDYGTSAYVLN--TNNRYAYFYAEAAD- 63
Query: 84 SEHWAGNV-QMCVGQDEFNIVDIKNCYTRGY---LRVGFTEYDTGQHENWTVQL 133
WAG + V Q F++ C G VG E ++ TV L
Sbjct: 64 GAVWAGPYGPIYVPQSAFSL-----CENIGQTGARIVGLREVYI-PSDSHTVNL 111
>gi|218245428|ref|YP_002370799.1| hypothetical protein PCC8801_0552 [Cyanothece sp. PCC 8801]
gi|218165906|gb|ACK64643.1| hypothetical protein PCC8801_0552 [Cyanothece sp. PCC 8801]
Length = 182
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC 61
+I + + + AG +CN ++I ++ W+++GWW++ C
Sbjct: 11 IIAAVGSQVTIGTQKAIAG-EICNNINDMIFISAAQMNNNDVWVSKGWWEVEPGAC 65
>gi|257058464|ref|YP_003136352.1| hypothetical protein Cyan8802_0569 [Cyanothece sp. PCC 8802]
gi|256588630|gb|ACU99516.1| hypothetical protein Cyan8802_0569 [Cyanothece sp. PCC 8802]
Length = 182
Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 6 LICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTC 61
+I + + + AG +CN ++I ++ W+++GWW++ C
Sbjct: 11 IIAAVGSQVTIGTQKAIAG-EICNNINDMIFISAAQMNNNDVWVSKGWWEVEPGAC 65
>gi|83949505|ref|ZP_00958238.1| hypothetical protein ISM_00385 [Roseovarius nubinhibens ISM]
gi|83837404|gb|EAP76700.1| hypothetical protein ISM_00385 [Roseovarius nubinhibens ISM]
Length = 169
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
Query: 15 IFCSNVSFAGF-RVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRY 73
+ + A R+CN + VAV +G W EGW C T +G S
Sbjct: 4 LLAPMPAQAFVARICNAGDTEMAVAVVAKTQEGLWQAEGWLPRGVGECVT--RGEDWSTE 61
Query: 74 YYLYAEGVSHSEHWA 88
+Y W
Sbjct: 62 FYFAYLYKDEEGRWG 76
>gi|212703431|ref|ZP_03311559.1| hypothetical protein DESPIG_01475 [Desulfovibrio piger ATCC 29098]
gi|212673176|gb|EEB33659.1| hypothetical protein DESPIG_01475 [Desulfovibrio piger ATCC 29098]
Length = 135
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Query: 36 GVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAG-NVQMC 94
+A+ Y G W+T+GW ++ +TV +Y G S G +
Sbjct: 38 SLALRYLRTDGVWVTKGWVNFGPHSKQTVTLETWEPVFYLHVEVGGGASVELPGEKHRFW 97
Query: 95 VGQDEFNIVDIKNCYTRGYLRVGFTEYDT-GQHENWTVQL 133
V +D F + RG + F + + G +T++
Sbjct: 98 VVRDVFELEGDAR-PARG-QQADFIKVEVRGDDPRFTLRF 135
>gi|323143961|ref|ZP_08078617.1| conserved domain protein [Succinatimonas hippei YIT 12066]
gi|322416262|gb|EFY06940.1| conserved domain protein [Succinatimonas hippei YIT 12066]
Length = 146
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 1 MLRSFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGN- 59
M++SFL S + V N T +A+ P G +T GW+
Sbjct: 15 MIKSFLSVVFILCFSLQSAFAKVVIEVKNDTPESCSLALNGPLADGKNLTLGWYVFAPGE 74
Query: 60 TCETVVKGALHSRYYYLY 77
+ V+ +++ Y++
Sbjct: 75 EAKIVIDEIVNADDIYVF 92
>gi|288574080|ref|ZP_06392437.1| hypothetical protein Dpep_1352 [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569821|gb|EFC91378.1| hypothetical protein Dpep_1352 [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 158
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 9/94 (9%)
Query: 4 SFLICFCFGAMIFCSNVSFAGFRVCNGTKNLIGVAVGY--PAVKGGWMTEGWWQIPGNTC 61
S + + F S A + N T + VA+ + + T+GW+ +
Sbjct: 12 SLCLVALIVFLCFAHEASAAKITLVNKTSVKVSVALQWWTDGSESRGGTKGWYGVEPGKS 71
Query: 62 ETV----VKG-ALHSRYYYLYAEGVSHSEHWAGN 90
T+ + G A+ Y YA+G W G+
Sbjct: 72 RTIVWSGIDGAAVQVGYMGFYAKG--KGLVWNGD 103
>gi|114571361|ref|YP_758041.1| hypothetical protein Mmar10_2822 [Maricaulis maris MCS10]
gi|114341823|gb|ABI67103.1| hypothetical protein Mmar10_2822 [Maricaulis maris MCS10]
Length = 289
Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 8/62 (12%)
Query: 15 IFCSNVSFAG----FRVCNGTKNLIGVAVGYPAVKGGWMT-EGWWQIPGNTCETVVKGAL 69
+ + + A +CN T + +A Y T W+ + C ++GA+
Sbjct: 23 LVSPSEALAQRDVLLNICNETGFSVAIASAYRTTAADDRTLRSWFLVEPGEC---LEGAV 79
Query: 70 HS 71
++
Sbjct: 80 NN 81
>gi|310644757|ref|YP_003949516.1| protein [Paenibacillus polymyxa SC2]
gi|309249708|gb|ADO59275.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
Length = 169
Score = 41.1 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 11/124 (8%)
Query: 24 GFRVCNGTKNLIGVAVGYPAVKG---GWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEG 80
G N T I V YP + GW+++ V G ++ YAE
Sbjct: 2 GLNFRNSTNAAIFVVFAYPDFSCTPVNYSKAGWYRVNPGQTIQVWSGFAGGNTFFYYAED 61
Query: 81 VSHSEHWAGNVQMCVGQDEFNI---VDIKNCYTRGYLRVGFTEYDTGQHENWTVQLTEPA 137
W G+ V ++ F+ C G R+ + + N+T+ +
Sbjct: 62 -DFGRTWQGSYFTQVPENAFDWCWDTGCTTCRNVGLRRIAVSPF----VLNYTIDFIRSS 116
Query: 138 QDRR 141
R+
Sbjct: 117 SQRK 120
>gi|228924821|ref|ZP_04087978.1| hypothetical protein bthur0011_57190 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228834830|gb|EEM80312.1| hypothetical protein bthur0011_57190 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 112
Score = 39.6 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 35 IGVAVGYPAV--KGGWMTEGWWQIPGNTCETVVKGALHSRYYYLYAEGVSHSEHWAGNVQ 92
+ +A + W +GW+++ T+ G Y +A + + W GN
Sbjct: 1 MWLAAAFYDPTCSSKWRKQGWFRMAPGQIITLWPGPATYSDVYFFARDTNETRKWEGNEY 60
>gi|83951925|ref|ZP_00960657.1| hypothetical protein ISM_15220 [Roseovarius nubinhibens ISM]
gi|83836931|gb|EAP76228.1| hypothetical protein ISM_15220 [Roseovarius nubinhibens ISM]
Length = 134
Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Query: 26 RVCNGTKNLIGVAVGYPAVKGGWMTEGWWQIPGNTCETVVKGALHSR-----YYYLYAEG 80
RV N + + + Y G W T GW+ I T+ R Y Y+YA+
Sbjct: 21 RVTNQCPEEMYLYLYYQPTAGDWRTAGWYTIAPGARTTLNHDGETIRHEFSKYLYVYADT 80
Query: 81 VSHSE 85
S
Sbjct: 81 ASGHG 85
>gi|302534461|ref|ZP_07286803.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302443356|gb|EFL15172.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 115
Score = 38.0 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Query: 43 AVKGGWMTEGWWQIPGNTCETVVKGALH--SRYYYLYAEGVSHSEHWAGNVQMCVGQDEF 100
+ W+ EGWW+I V G + ++ +Y YA W Q V F
Sbjct: 25 SDGSNWVKEGWWRIGPGESAVVYGGDVSAVNQIWYCYAYSGD-GVEWRDRFQETVPHRAF 83
Query: 101 N 101
Sbjct: 84 E 84
>gi|169630526|ref|YP_001704175.1| hypothetical protein MAB_3445c [Mycobacterium abscessus ATCC
19977]
gi|169242493|emb|CAM63521.1| Hypothetical protein MAB_3445c [Mycobacterium abscessus]
Length = 120
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 6/38 (15%)
Query: 34 LIGVAVGYPAVK------GGWMTEGWWQIPGNTCETVV 65
+ VAV GGW T GWW + +T +
Sbjct: 13 PVSVAVMQVDSDACGGEYGGWATHGWWNLNPGESKTAI 50
>gi|77918249|ref|YP_356064.1| hypothetical protein Pcar_0635 [Pelobacter carbinolicus DSM 2380]
gi|77544332|gb|ABA87894.1| hypothetical protein Pcar_0635 [Pelobacter carbinolicus DSM 2380]
Length = 458
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 9/50 (18%)
Query: 52 GWWQIPGNTCETVVKG---ALHSRY-----YYLYAEGVSHSEHWAGNVQM 93
GW+ + G+ ET L +RY Y+YA + W+ NV M
Sbjct: 316 GWYYLSGDDPETSEDEGWNPLWARYPQYSELYVYAFDTDGAGRWS-NVNM 364
>gi|29827723|ref|NP_822357.1| hypothetical protein SAV_1182 [Streptomyces avermitilis MA-4680]
gi|29604823|dbj|BAC68892.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 133
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Query: 43 AVKGGWMTEGWWQIPGNTCETVVKGAL--HSRYYYLYAEGVSHSEHWAGNVQMCVGQDEF 100
+ G WM +GWW+I TV + + +Y YA W Q V F
Sbjct: 42 SDGGDWMKKGWWKIGPGQTSTVFGDDVHAVNPIWYCYAHSSD-GLEWRDRFQELVPTHAF 100
Query: 101 N 101
Sbjct: 101 E 101
>gi|73541947|ref|YP_296467.1| hypothetical protein Reut_A2260 [Ralstonia eutropha JMP134]
gi|72119360|gb|AAZ61623.1| hypothetical protein Reut_A2260 [Ralstonia eutropha JMP134]
Length = 173
Score = 34.2 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 47 GWMTEGWWQIPGNTCETVVKGALHSRY 73
GW+T GWW +C V+ RY
Sbjct: 69 GWVTRGWWSWAAQSCSAVLPSP--QRY 93
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.308 0.144 0.503
Lambda K H
0.267 0.0447 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,128,482,003
Number of Sequences: 14124377
Number of extensions: 137196431
Number of successful extensions: 304993
Number of sequences better than 10.0: 157
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 304327
Number of HSP's gapped (non-prelim): 343
length of query: 141
length of database: 4,842,793,630
effective HSP length: 105
effective length of query: 36
effective length of database: 3,359,734,045
effective search space: 120950425620
effective search space used: 120950425620
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.6 bits)
S2: 76 (33.8 bits)