HHsearch alignment for GI: 254780444 and conserved domain: COG1709

>COG1709 Predicted transcriptional regulator [Transcription].
Probab=97.39  E-value=0.00019  Score=48.87  Aligned_cols=59  Identities=24%  Similarity=0.350  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf             9999999999996499988999982899879889975157887557798999998732187521
Q gi|254780444|r    7 KKIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETIC   70 (223)
Q Consensus         7 ~~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~   70 (223)
T Consensus        26 ~~pge~lrKWR~~F~iSQ~elA~~l~vSpSVISDYE~----GRRk~Pg~~~vkk~V~AL-IeID   84 (241)
T COG1709          26 EDPGETLRKWREIFNVSQTELARELGVSPSVISDYES----GRRKSPGIAFVKKFVEAL-IEID   84 (241)
T ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEHHHC----CCCCCCCHHHHHHHHHHH-HHHH
T ss_conf             7825899999998182499999872899100312112----575686178999999999-8666