HHsearch alignment for GI: 254780444 and conserved domain: COG2390

>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].

Probab=93.64  E-value=0.17  Score=29.78  Aligned_cols=72  Identities=11%  Similarity=0.052  Sum_probs=45.8

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHC-CCCC----CCCC---CCHHHHHHHHHHCCCCCCCCCC
Q ss_conf             755899999999999964999889999828998798899751-5788----7557---7989999987321875210000
Q gi|254780444|r    3 SFSHKKIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRF-GIEG----RNRW---PSTESIFKILAATNETICQLLD   74 (223)
Q Consensus         3 ~~~~~~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~-~~~g----~~r~---p~~~~l~kia~~~~v~~~~l~~   74 (223)
T Consensus         8 ~~~~~~l~~~~A~lYY~~gltQ~eIA~~LgiSR~~v~rlL~~Ar~~GiV~I~i~~~~~~~~~Le~~L~~~fgL~~a~VVp   87 (321)
T COG2390           8 LMEEERLLARAAWLYYVEGLTQSEIAERLGISRATVSRLLAKAREEGIVKISINSPVEGCLELEQQLKERFGLKEAIVVP   87 (321)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEC
T ss_conf             12689999999999984688799999883988999999999999879389996798765399999999965997699974