HHsearch alignment for GI: 254780444 and conserved domain: COG2944

>COG2944 Predicted transcriptional regulator [Transcription].
Probab=97.25  E-value=0.00065  Score=45.42  Aligned_cols=37  Identities=19%  Similarity=0.224  Sum_probs=33.5

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             9999999964999889999828998798899751578
Q gi|254780444|r   11 EAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIE   47 (223)
Q Consensus        11 ~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~   47 (223)
T Consensus        47 ~eIk~iRe~~~lSq~vFA~~L~vs~~Tv~~WEqGr~k   83 (104)
T COG2944          47 TEIKAIREKLGLSQPVFARYLGVSVSTVRKWEQGRKK   83 (104)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCC
T ss_conf             9999999982888999999988879999999817858