HHsearch alignment for GI: 254780444 and conserved domain: COG3636

>COG3636 Predicted transcriptional regulator [Transcription].
Probab=95.12  E-value=0.061  Score=32.65  Aligned_cols=56  Identities=29%  Similarity=0.353  Sum_probs=41.5

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf             999999999964999889999828998798899751578875577989999987321875210
Q gi|254780444|r    9 IWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQ   71 (223)
Q Consensus         9 i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~   71 (223)
T Consensus        39 i~~alg~var~~G--MsqvA~~aGlsRe~LYkaLS~~GN-----Ptf~Til~V~kAlG~rl~~   94 (100)
T COG3636          39 IAAALGVVARSRG--MSQVARKAGLSREGLYKALSPGGN-----PTFDTILAVLKALGLRLSA   94 (100)
T ss_pred             HHHHHHHHHHHCC--HHHHHHHHCCCHHHHHHHHCCCCC-----CCHHHHHHHHHHCCCEEEC
T ss_conf             9999999998657--899999949669999998478999-----7589999999980865421