HHsearch alignment for GI: 254780444 and conserved domain: COG3655
>COG3655 Predicted transcriptional regulator [Transcription].
Probab=97.25 E-value=0.0009 Score=44.48 Aligned_cols=65 Identities=18% Similarity=0.188 Sum_probs=55.2
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 999999999649998899998289987988997515788755779899999873218752100001111
Q gi|254780444|r 10 WEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLLDLPFS 78 (223)
Q Consensus 10 ~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~~~~~~ 78 (223)
T Consensus 4 ~~~l~~~l~~r~~~~~eLa~~igis~~~ls~l~----~gk~k~I~~~tL~~iC~~LeCqpgDiley~~d 68 (73)
T COG3655 4 AVRLDVMLADRKISLKELAEAIGISEANLSKLK----TGKVKAIRLSTLEKICKALECQPGDILEYVPD 68 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH----CCCCCEEEHHHHHHHHHHCCCCHHHEEEEECC
T ss_conf 376799999975017789999843698999997----28866044899999999838984054577168