HHsearch alignment for GI: 254780444 and conserved domain: COG3655

>COG3655 Predicted transcriptional regulator [Transcription].
Probab=97.25  E-value=0.0009  Score=44.48  Aligned_cols=65  Identities=18%  Similarity=0.188  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             999999999649998899998289987988997515788755779899999873218752100001111
Q gi|254780444|r   10 WEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLLDLPFS   78 (223)
Q Consensus        10 ~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~~~~~~   78 (223)
T Consensus         4 ~~~l~~~l~~r~~~~~eLa~~igis~~~ls~l~----~gk~k~I~~~tL~~iC~~LeCqpgDiley~~d   68 (73)
T COG3655           4 AVRLDVMLADRKISLKELAEAIGISEANLSKLK----TGKVKAIRLSTLEKICKALECQPGDILEYVPD   68 (73)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH----CCCCCEEEHHHHHHHHHHCCCCHHHEEEEECC
T ss_conf             376799999975017789999843698999997----28866044899999999838984054577168