HHsearch alignment for GI: 254780444 and conserved domain: PRK06424
>PRK06424 transcription factor; Provisional.
Probab=97.57 E-value=0.00035 Score=47.12 Aligned_cols=59 Identities=17% Similarity=0.131 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 9999999999964999889999828998798899751578875577989999987321875210
Q gi|254780444|r 8 KIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQ 71 (223)
Q Consensus 8 ~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~ 71 (223)
T Consensus 84 Dy~~~Ir~ARE~~GlsqeeLA~ki~ek~svI~kiE~G~l~-----P~~~~~kKLEk~L~I~L~E 142 (144)
T PRK06424 84 DYAELVKNARERLSMSQADLAAKIFERKNVIASIERGDLL-----PDIKTARKLEKILGITLIE 142 (144)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCC-----CCHHHHHHHHHHHCCEEEE
T ss_conf 7999999999984999999999965449999999838989-----9989999999984967663