HHsearch alignment for GI: 254780444 and conserved domain: PRK09943

>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional.
Probab=99.21  E-value=5.1e-10  Score=84.96  Aligned_cols=65  Identities=12%  Similarity=0.249  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             9999999999964999889999828998798899751578875577989999987321875210000111
Q gi|254780444|r    8 KIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLLDLPF   77 (223)
Q Consensus         8 ~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~~~~~   77 (223)
T Consensus         7 ~iG~rIr~lR~~~glTL~eLA~~sGvS~s~LSqIErg~~~-----PSl~tL~kIa~aL~v~l~~lf~~~~   71 (185)
T PRK09943          7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVS-----PAISTLQKLLKVYGLSLSEFFSEPE   71 (185)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCC-----CCHHHHHHHHHHHCCCHHHHHCCCC
T ss_conf             4889999999985998999998879699999999879999-----9999999999984999999827745