HHsearch alignment for GI: 254780444 and conserved domain: PRK09943
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional.
Probab=99.21 E-value=5.1e-10 Score=84.96 Aligned_cols=65 Identities=12% Similarity=0.249 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 9999999999964999889999828998798899751578875577989999987321875210000111
Q gi|254780444|r 8 KIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLLDLPF 77 (223)
Q Consensus 8 ~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~~~~~ 77 (223)
T Consensus 7 ~iG~rIr~lR~~~glTL~eLA~~sGvS~s~LSqIErg~~~-----PSl~tL~kIa~aL~v~l~~lf~~~~ 71 (185)
T PRK09943 7 APGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVS-----PAISTLQKLLKVYGLSLSEFFSEPE 71 (185)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCC-----CCHHHHHHHHHHHCCCHHHHHCCCC
T ss_conf 4889999999985998999998879699999999879999-----9999999999984999999827745