HHsearch alignment for GI: 254780444 and conserved domain: PRK10344
>PRK10344 DNA-binding transcriptional regulator Nlp; Provisional.
Probab=96.02 E-value=0.016 Score=36.36 Aligned_cols=53 Identities=19% Similarity=0.296 Sum_probs=42.0
Q ss_pred HHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 9999996499988999982899879889975157887557798999998732187521000
Q gi|254780444|r 13 IDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLL 73 (223)
Q Consensus 13 i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~ 73 (223)
T Consensus 13 IiAAL~KrG~sLa~Lsr~aGls~sTL~nAL~------rpwPKgE~i--IA~aLGv~P~eIW 65 (90)
T PRK10344 13 IIAGLRKKGTSMAAESRRNGLSSSTLANALS------RPWPKGEMI--IAKALGTDPWVIW 65 (90)
T ss_pred HHHHHHHCCCCHHHHHHHCCCCHHHHHHHHC------CCCCHHHHH--HHHHHCCCHHHCC
T ss_conf 9999998688699999990998688999874------899567999--9999787988809