HHsearch alignment for GI: 254780444 and conserved domain: PRK10344

>PRK10344 DNA-binding transcriptional regulator Nlp; Provisional.
Probab=96.02  E-value=0.016  Score=36.36  Aligned_cols=53  Identities=19%  Similarity=0.296  Sum_probs=42.0

Q ss_pred             HHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf             9999996499988999982899879889975157887557798999998732187521000
Q gi|254780444|r   13 IDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLL   73 (223)
Q Consensus        13 i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~   73 (223)
T Consensus        13 IiAAL~KrG~sLa~Lsr~aGls~sTL~nAL~------rpwPKgE~i--IA~aLGv~P~eIW   65 (90)
T PRK10344         13 IIAGLRKKGTSMAAESRRNGLSSSTLANALS------RPWPKGEMI--IAKALGTDPWVIW   65 (90)
T ss_pred             HHHHHHHCCCCHHHHHHHCCCCHHHHHHHHC------CCCCHHHHH--HHHHHCCCHHHCC
T ss_conf             9999998688699999990998688999874------899567999--9999787988809