HHsearch alignment for GI: 254780444 and conserved domain: PRK11303
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional.
Probab=90.54 E-value=0.69 Score=25.79 Aligned_cols=50 Identities=16% Similarity=0.109 Sum_probs=33.5
Q ss_pred CCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCH---HHHHHHHHHCCCCCCCCC
Q ss_conf 9988999982899879889975157887557798---999998732187521000
Q gi|254780444|r 22 LTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPST---ESIFKILAATNETICQLL 73 (223)
Q Consensus 22 ls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~---~~l~kia~~~~v~~~~l~ 73 (223)
T Consensus 1 vTikDVA~~AGVS~aTVSrvLNg~~~--~~~Vs~~Tr~rV~~aa~eLgY~Pn~~A 53 (330)
T PRK11303 1 MKLDEIARLAGVSRTTASYVINGKAK--QYRISDKTVEKVMAVVREHNYHPNAVA 53 (330)
T ss_pred CCHHHHHHHHCCCHHHHHHHHCCCCC--CCCCCHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 97899999979799899888389998--887699999999999999689948889