HHsearch alignment for GI: 254780444 and conserved domain: PRK13756
>PRK13756 tetracycline repressor protein TetR; Provisional.
Probab=93.23 E-value=0.2 Score=29.27 Aligned_cols=43 Identities=19% Similarity=0.295 Sum_probs=36.1
Q ss_pred CCCCCHHHHHHHHHHHHHHCC---CCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 977558999999999999649---9988999982899879889975
Q gi|254780444|r 1 MTSFSHKKIWEAIDRMAERHN---LTPSGLARKAGLDPTSFNKSKR 43 (223)
Q Consensus 1 ~~~~~~~~i~~~i~~l~~~~g---ls~~~lA~~~Gv~~~ti~~~~~ 43 (223)
T Consensus 1 ~a~Lsre~Iv~aAl~Lld~~Gl~alSMRrLA~~LgV~~~sLY~Hv~ 46 (205)
T PRK13756 1 MSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWHVK 46 (205)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHCC
T ss_conf 9978999999999999982380006699999994899317898738