HHsearch alignment for GI: 254780444 and conserved domain: cd00093
>cd00093 HTH_XRE Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
Probab=98.39 E-value=8.5e-07 Score=64.08 Aligned_cols=57 Identities=23% Similarity=0.307 Sum_probs=51.4
Q ss_pred HHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999649998899998289987988997515788755779899999873218752100
Q gi|254780444|r 11 EAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQL 72 (223)
Q Consensus 11 ~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l 72 (223)
T Consensus 2 ~~l~~~r~~~~ls~~~lA~~~gis~~~l~~~e~g~~-----~p~~~~l~~la~~~~~~~~~l 58 (58)
T cd00093 2 ERLKELRKEKGLTQEELAEKLGVSRSTISRIENGKR-----NPSLETLEKLAKALGVSLDEL 58 (58)
T ss_pred HHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCC-----CCCHHHHHHHHHHHCCCHHHC
T ss_conf 899999997599999995714999999999987998-----999999999999938989879