HHsearch alignment for GI: 254780444 and conserved domain: pfam00356

>pfam00356 LacI Bacterial regulatory proteins, lacI family.
Probab=90.31  E-value=0.6  Score=26.19  Aligned_cols=37  Identities=27%  Similarity=0.191  Sum_probs=25.7

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             988999982899879889975157887557798999998732
Q gi|254780444|r   23 TPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAA   64 (223)
Q Consensus        23 s~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~   64 (223)
T Consensus         1 Ti~DIA~~agVS~~TVSr~ln~~~~-----vs~~tr~rI~~~   37 (46)
T pfam00356         1 TIKDVARLAGVSKATVSRVLNNPER-----VSEETREKVEAA   37 (46)
T ss_pred             CHHHHHHHHCCCHHHHHHHHCCCCC-----CCHHHHHHHHHH
T ss_conf             9999999989799999999879798-----999999999999