HHsearch alignment for GI: 254780444 and conserved domain: pfam00356
>pfam00356 LacI Bacterial regulatory proteins, lacI family.
Probab=90.31 E-value=0.6 Score=26.19 Aligned_cols=37 Identities=27% Similarity=0.191 Sum_probs=25.7
Q ss_pred CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 988999982899879889975157887557798999998732
Q gi|254780444|r 23 TPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAA 64 (223)
Q Consensus 23 s~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~ 64 (223)
T Consensus 1 Ti~DIA~~agVS~~TVSr~ln~~~~-----vs~~tr~rI~~~ 37 (46)
T pfam00356 1 TIKDVARLAGVSKATVSRVLNNPER-----VSEETREKVEAA 37 (46)
T ss_pred CHHHHHHHHCCCHHHHHHHHCCCCC-----CCHHHHHHHHHH
T ss_conf 9999999989799999999879798-----999999999999