HHsearch results for GI: 254780444 and protein with PDBid: 2hnf_A

>2hnf_A Repressor protein CI101-229DM-K192A; viral protein; 1.80A {Escherichia coli} PDB: 2ho0_A 1f39_A
Probab=99.84  E-value=6.3e-20  Score=147.71  Aligned_cols=125  Identities=18%  Similarity=0.197  Sum_probs=96.6

Q ss_pred             CCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCC------CCCCCCCCEEEE
Q ss_conf             22122024310113452221112544464035643721135454200368559999628332------421487868999
Q gi|254780444|r   86 KEKEIPLLYFPPSGSGGFFDSGVFPTGNKWNTVGVPEIRSPHNGIYAIQTQDTRHKTQDTSM------LPLYRKGDILIL  159 (223)
Q Consensus        86 ~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~V~GDSM------~P~i~~Gd~vlV  159 (223)
                      ....+|++++.+||.+....+. +......++...+         ...++++|+++|+||||      +|.|++||+|+|
T Consensus         3 ~~~~~Pvi~~v~AG~~~e~~~~-~~~~~~~~~~~~~---------~~~~~~~fal~V~GdSM~~~~~~ep~i~~GdiviV   72 (133)
T 2hnf_A            3 HMYEYPVFSHVQAGMFSPELRT-FTKGDAERWVSTT---------KKASDSAFWLEVEGNSMTTPTGSKTSFPDGMLILV   72 (133)
T ss_dssp             CCEEEEEECEEESSSSCTTCEE-ECSSCCCEEEEES---------CCCCTTCEEEECCSSTTCCC---CCCCCTTCEEEE
T ss_pred             CCEEECCEEEECCCCCCCCCCC-CCCCCCCCCCCCC---------CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEE
T ss_conf             5378466507348997123223-4433330014555---------57888869999847723576566885489999999


Q ss_pred             ECCCCCCCCCEEEEEEECCCEEEEEEEEECCCEEEEEECCCCCCCEEECHHHEEEEEEEEEEEC
Q ss_conf             3689740588899997179689999999779879999685898875854786599977998529
Q gi|254780444|r  160 NSAIQVNCGDRLLIKPRTGDIVAKVLISRRGRSIDLMSLNCCYPVDTVEMSDIEWIARILWASQ  223 (223)
Q Consensus       160 d~~~~~~~g~~v~~~~~~~~~~iKrl~~~~~~~~~l~s~Np~y~~~~i~~~~i~iigrVvw~~~  223 (223)
                      |++.+..+|++|++...++++++||+.+. ++.+.|.|+||+|+++.++ ++++|||||| .||
T Consensus        73 d~~~~~~~g~~vva~~~~~~~~~k~~~~~-~~~~~L~s~Np~y~~i~~~-~~~~IiG~Vv-~~~  133 (133)
T 2hnf_A           73 DPEQAVEPGDFCIARLGGDEFTFAKLIRD-SGQVFLQPLNPQYPMIPCN-ESCSVVGKVI-ASQ  133 (133)
T ss_dssp             ETTSCCCTTSEEEEEETTTEEEEEEEEEE-TTEEEEECSSTTSCCEECS-TTEEEEEEEE-EEC
T ss_pred             ECCCCCCCCCEEEEEECCCCEEEEEEEEE-CCEEEEEECCCCCCCCCCC-CCEEEEEEEE-EEC
T ss_conf             71463465886999994687699999984-9989999799998978269-9839999999-829