HHsearch results for GI: 254780444 and protein with PDBid: 2hnf_A
>2hnf_A Repressor protein CI101-229DM-K192A; viral protein; 1.80A {Escherichia coli} PDB: 2ho0_A 1f39_A
Probab=99.84 E-value=6.3e-20 Score=147.71 Aligned_cols=125 Identities=18% Similarity=0.197 Sum_probs=96.6
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCC------CCCCCCCCEEEE
Q ss_conf 22122024310113452221112544464035643721135454200368559999628332------421487868999
Q gi|254780444|r 86 KEKEIPLLYFPPSGSGGFFDSGVFPTGNKWNTVGVPEIRSPHNGIYAIQTQDTRHKTQDTSM------LPLYRKGDILIL 159 (223)
Q Consensus 86 ~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~V~GDSM------~P~i~~Gd~vlV 159 (223)
....+|++++.+||.+....+. +......++...+ ...++++|+++|+|||| +|.|++||+|+|
T Consensus 3 ~~~~~Pvi~~v~AG~~~e~~~~-~~~~~~~~~~~~~---------~~~~~~~fal~V~GdSM~~~~~~ep~i~~GdiviV 72 (133)
T 2hnf_A 3 HMYEYPVFSHVQAGMFSPELRT-FTKGDAERWVSTT---------KKASDSAFWLEVEGNSMTTPTGSKTSFPDGMLILV 72 (133)
T ss_dssp CCEEEEEECEEESSSSCTTCEE-ECSSCCCEEEEES---------CCCCTTCEEEECCSSTTCCC---CCCCCTTCEEEE
T ss_pred CCEEECCEEEECCCCCCCCCCC-CCCCCCCCCCCCC---------CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEE
T ss_conf 5378466507348997123223-4433330014555---------57888869999847723576566885489999999
Q ss_pred ECCCCCCCCCEEEEEEECCCEEEEEEEEECCCEEEEEECCCCCCCEEECHHHEEEEEEEEEEEC
Q ss_conf 3689740588899997179689999999779879999685898875854786599977998529
Q gi|254780444|r 160 NSAIQVNCGDRLLIKPRTGDIVAKVLISRRGRSIDLMSLNCCYPVDTVEMSDIEWIARILWASQ 223 (223)
Q Consensus 160 d~~~~~~~g~~v~~~~~~~~~~iKrl~~~~~~~~~l~s~Np~y~~~~i~~~~i~iigrVvw~~~ 223 (223)
|++.+..+|++|++...++++++||+.+. ++.+.|.|+||+|+++.++ ++++|||||| .||
T Consensus 73 d~~~~~~~g~~vva~~~~~~~~~k~~~~~-~~~~~L~s~Np~y~~i~~~-~~~~IiG~Vv-~~~ 133 (133)
T 2hnf_A 73 DPEQAVEPGDFCIARLGGDEFTFAKLIRD-SGQVFLQPLNPQYPMIPCN-ESCSVVGKVI-ASQ 133 (133)
T ss_dssp ETTSCCCTTSEEEEEETTTEEEEEEEEEE-TTEEEEECSSTTSCCEECS-TTEEEEEEEE-EEC
T ss_pred ECCCCCCCCCEEEEEECCCCEEEEEEEEE-CCEEEEEECCCCCCCCCCC-CCEEEEEEEE-EEC
T ss_conf 71463465886999994687699999984-9989999799998978269-9839999999-829