HHsearch results for GI: 254780444 and protein with PDBid: 2r1j_L
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=98.86 E-value=3.9e-09 Score=77.79 Aligned_cols=64 Identities=17% Similarity=0.223 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 999999999999649998899998289987988997515788755779899999873218752100001
Q gi|254780444|r 7 KKIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLLDL 75 (223)
Q Consensus 7 ~~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~~~ 75 (223)
+.|+++|+++|+++|+||.+||+++|++++++++|++|... |+.+.+.+++++++++++||+.+
T Consensus 4 ~~ig~rlr~~R~~~glsq~~la~~~gvs~~~i~~~e~g~~~-----p~~~~l~~la~~l~v~~~~ll~g 67 (68)
T 2r1j_L 4 QLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETE-----PNGENLLALSKALQCSPDYLLKG 67 (68)
T ss_dssp CCHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSC-----CBHHHHHHHHHHTTSCHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCC-----CCHHHHHHHHHHHCCCHHHHHCC
T ss_conf 99999999999985999999988739999999999879989-----99999999999979979998587