HHsearch results for GI: 254780444 and protein with PDBid: 3fmy_A
>3fmy_A HTH-type transcriptional regulator MQSA (YGIT/B3021); helix-turn-helix, DNA-binding, transcription regulation, DNA binding protein; HET: MEQ; 1.40A {Escherichia coli k-12}
Probab=98.49 E-value=5.3e-08 Score=70.50 Aligned_cols=67 Identities=19% Similarity=0.208 Sum_probs=50.5
Q ss_pred CCCCCHHHH-HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 977558999-9999999996499988999982899879889975157887557798999998732187521000
Q gi|254780444|r 1 MTSFSHKKI-WEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLL 73 (223)
Q Consensus 1 ~~~~~~~~i-~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~ 73 (223)
|..+..+.+ .+.|+++|+++||||.+||+++|++++|+++|++|... |+. .+.+++.+++++++++.
T Consensus 3 m~~~~~~~~~p~~ik~~R~~~gltQ~elA~~lgvs~~ti~~~E~G~~~-----P~~-~~~~l~~~l~~~P~~l~ 70 (73)
T 3fmy_A 3 MASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAX-----PHP-STIKLLRVLDKHPELLN 70 (73)
T ss_dssp -----CCCCCHHHHHHHHHHTTCCHHHHHHHHCSCTTHHHHHHTTSSC-----CCH-HHHHHHHHHHHCGGGHH
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCC-----CCH-HHHHHHHHHCCCHHHHH
T ss_conf 675552215999999999985999999999989799999999979979-----999-99999999877918888