HHsearch results for GI: 254780444 and protein with PDBid: 3fmy_A

>3fmy_A HTH-type transcriptional regulator MQSA (YGIT/B3021); helix-turn-helix, DNA-binding, transcription regulation, DNA binding protein; HET: MEQ; 1.40A {Escherichia coli k-12}
Probab=98.49  E-value=5.3e-08  Score=70.50  Aligned_cols=67  Identities=19%  Similarity=0.208  Sum_probs=50.5

Q ss_pred             CCCCCHHHH-HHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf             977558999-9999999996499988999982899879889975157887557798999998732187521000
Q gi|254780444|r    1 MTSFSHKKI-WEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLL   73 (223)
Q Consensus         1 ~~~~~~~~i-~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~   73 (223)
                      |..+..+.+ .+.|+++|+++||||.+||+++|++++|+++|++|...     |+. .+.+++.+++++++++.
T Consensus         3 m~~~~~~~~~p~~ik~~R~~~gltQ~elA~~lgvs~~ti~~~E~G~~~-----P~~-~~~~l~~~l~~~P~~l~   70 (73)
T 3fmy_A            3 MASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAX-----PHP-STIKLLRVLDKHPELLN   70 (73)
T ss_dssp             -----CCCCCHHHHHHHHHHTTCCHHHHHHHHCSCTTHHHHHHTTSSC-----CCH-HHHHHHHHHHHCGGGHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCC-----CCH-HHHHHHHHHCCCHHHHH
T ss_conf             675552215999999999985999999999989799999999979979-----999-99999999877918888