HHSEARCH alignment of GI: 254780444 and SCOP domain: d1dwka1

Alignment

Probab=94.17  E-value=0.072  Score=29.20  Aligned_cols=66  Identities=11%  Similarity=-0.021  Sum_probs=52.8

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf             77558999999999999649998899998289987988997515788755779899999873218752100
Q gi|254780444|r    2 TSFSHKKIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQL   72 (223)
Q Consensus         2 ~~~~~~~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l   72 (223)
                      +..++.++-+.|-....++|||-+++|+.+|+++..+.....|-..     .+.+...++++.++.+-+..
T Consensus         7 ~~~~r~~lte~Il~AK~~kgltw~~IA~~iG~s~vwvtaa~lGQ~~-----l~~~~A~~l~~~L~L~~e~~   72 (86)
T d1dwka1           7 NRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQA-----LPADAARLVGAKLDLDEDSI   72 (86)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCCHHHHHTTSSSCHHHHHHHHTTSSC-----CCHHHHHHHHHHHTCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCC-----CCHHHHHHHHHHCCCCHHHH
T ss_conf             4426999999999999983998999998959889999999845788-----99999999999749999999

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: Cyanase N-terminal domain
domain: Cyanase N-terminal domain
species: Escherichia coli [TaxId: 562]