HHSEARCH alignment of GI: 254780444 and SCOP domain: d1efaa1

Alignment
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=90.82  E-value=0.18  Score=26.60  Aligned_cols=49  Identities=14%  Similarity=0.051  Sum_probs=33.4

Q ss_pred             CCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf             999889999828998798899751578875577989999987321875210
Q gi|254780444|r   21 NLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQ   71 (223)
Q Consensus        21 gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~   71 (223)
                      ..|..++|+++|+|++|+++..++...  -+.-..+.+.++++.+|-.++.
T Consensus         2 ~~Ti~diA~~agvS~sTVSr~l~~~~~--vs~~tr~rI~~~a~~lgY~pn~   50 (59)
T d1efaa1           2 PVTLYDVAEYAGVSYQTVSRVVNQASH--VSAKTREKVEAAMAELNYIPNR   50 (59)
T ss_dssp             CCCHHHHHHTTTSCHHHHHHHHTTCSS--CCTHHHHHHHHHHHHHTCCCCH
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHCCCCC--CCHHHHHHHHHHHHHHCCCCCH
T ss_conf             888999998979799999999779986--7999999999999998898699


SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: GalR/LacI-like bacterial regulator
domain: Lac repressor (LacR), N-terminal domain
species: Escherichia coli [TaxId: 562]