HHSEARCH alignment of GI: 254780444 and SCOP domain: d1f39a_

Alignment
>d1f39a_ b.87.1.1 (A:) lambda repressor C-terminal domain {Bacteriophage lambda [TaxId: 10710]}
Probab=99.80  E-value=2.4e-19  Score=142.35  Aligned_cols=86  Identities=17%  Similarity=0.277  Sum_probs=78.7

Q ss_pred             CCCEEEEEECCCCC------CCCCCCCCEEEEECCCCCCCCCEEEEEEECCCEEEEEEEEECCCEEEEEECCCCCCCEEE
Q ss_conf             68559999628332------421487868999368974058889999717968999999977987999968589887585
Q gi|254780444|r  134 QTQDTRHKTQDTSM------LPLYRKGDILILNSAIQVNCGDRLLIKPRTGDIVAKVLISRRGRSIDLMSLNCCYPVDTV  207 (223)
Q Consensus       134 ~~~~~~l~V~GDSM------~P~i~~Gd~vlVd~~~~~~~g~~v~~~~~~~~~~iKrl~~~~~~~~~l~s~Np~y~~~~i  207 (223)
                      ..++|+++|+||||      +|.|++||+|+||++.++.+|++|++...++++++||+.+. ++.+.|.|+||+|+++.+
T Consensus         2 s~~~F~l~V~GdSM~~~~~~ep~i~~Gd~viVd~~~~~~~g~ivva~~~~~~~~vKr~~~~-~~~~~L~s~N~~y~~i~~   80 (101)
T d1f39a_           2 SASAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFCIARLGGDEFTFKKLIRD-SGQVFLQPLNPQYPMIPC   80 (101)
T ss_dssp             CTTCEEEECCSSTTCCCTTCSSCCCTTCEEEEETTSCCCTTCEEEEECTTSCEEEEEEEEE-TTEEEEECSSTTSCCEEC
T ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCEEEEEEEEEC-CCEEEEEECCCCCCCCCC
T ss_conf             7678999995875478866689849899999981475577989999988980899999976-998999989989898837


Q ss_pred             CHHHEEEEEEEEEE
Q ss_conf             47865999779985
Q gi|254780444|r  208 EMSDIEWIARILWA  221 (223)
Q Consensus       208 ~~~~i~iigrVvw~  221 (223)
                      + ++++|||||||.
T Consensus        81 ~-~~~~IiG~Vv~s   93 (101)
T d1f39a_          81 N-ESCSVVGKVIAS   93 (101)
T ss_dssp             S-TTCEEEEEEEEE
T ss_pred             C-CCCEEEEEEEEE
T ss_conf             9-986999999889


SCOP domain information

class: All beta proteins
fold: LexA/Signal peptidase
superfamily: LexA/Signal peptidase
family: LexA-related
domain: lambda repressor C-terminal domain
species: Bacteriophage lambda [TaxId: 10710]