HHSEARCH alignment of GI: 254780444 and SCOP domain: d1jhfa1

Alignment
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=92.82  E-value=0.071  Score=29.26  Aligned_cols=40  Identities=13%  Similarity=0.474  Sum_probs=33.2

Q ss_pred             CCCC--HHHHHHHHHHHHHHCCCCH--HHHHHHHCC-CHHHHHHH
Q ss_conf             7755--8999999999999649998--899998289-98798899
Q gi|254780444|r    2 TSFS--HKKIWEAIDRMAERHNLTP--SGLARKAGL-DPTSFNKS   41 (223)
Q Consensus         2 ~~~~--~~~i~~~i~~l~~~~gls~--~~lA~~~Gv-~~~ti~~~   41 (223)
                      ++||  ..+|+.+|....++.|.+|  .++|+.+|+ |++++.++
T Consensus         1 ~~LT~rQ~~vL~~I~~~~~~~G~~Ps~rei~~~~g~~S~stv~~~   45 (71)
T d1jhfa1           1 KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEH   45 (71)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCCCHHHHHHHTTCSSHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHH
T ss_conf             987999999999999999982889889999977299999999999


SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: LexA repressor, N-terminal DNA-binding domain
domain: LexA repressor, N-terminal DNA-binding domain
species: Escherichia coli [TaxId: 562]