HHSEARCH alignment of GI: 254780444 and SCOP domain: d1jhfa2

Alignment
>d1jhfa2 b.87.1.1 (A:73-198) LexA C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.80  E-value=3.9e-19  Score=141.05  Aligned_cols=118  Identities=14%  Similarity=0.152  Sum_probs=91.7

Q ss_pred             CCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCC-CCCCCEEEEECCCCCCC
Q ss_conf             22024310113452221112544464035643721135454200368559999628332421-48786899936897405
Q gi|254780444|r   89 EIPLLYFPPSGSGGFFDSGVFPTGNKWNTVGVPEIRSPHNGIYAIQTQDTRHKTQDTSMLPL-YRKGDILILNSAIQVNC  167 (223)
Q Consensus        89 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~V~GDSM~P~-i~~Gd~vlVd~~~~~~~  167 (223)
                      .+|+++..+||......      ....+.+.++...       ..++++|+++|+||||+|+ |++||+|+|+++.++.+
T Consensus         3 ~IPv~g~v~AG~p~~a~------e~~e~~~~~~~~~-------~~~~~~f~lrV~GdSM~~~~i~~gd~viv~~~~~~~~   69 (126)
T d1jhfa2           3 GLPLVGRVAADEPLLAQ------QHIEGHYQVDPSL-------FKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRN   69 (126)
T ss_dssp             SEEEECCCCTTSCTTCG------GGEEEEECBCGGG-------SSSCCCEEEECCSSTTGGGTCCTTCEEEEEECSCCCT
T ss_pred             CCCEEEEECCCCCCHHH------CCCCCEEECCHHH-------CCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCC
T ss_conf             89888783698988002------0333248456899-------3888669999948766674147997999713640339


Q ss_pred             CCEEEEEEECCCEEEEEEEEECCCEEEEEECCCCCCCEEECH--HHEEEEEEEEEE
Q ss_conf             888999971796899999997798799996858988758547--865999779985
Q gi|254780444|r  168 GDRLLIKPRTGDIVAKVLISRRGRSIDLMSLNCCYPVDTVEM--SDIEWIARILWA  221 (223)
Q Consensus       168 g~~v~~~~~~~~~~iKrl~~~~~~~~~l~s~Np~y~~~~i~~--~~i~iigrVvw~  221 (223)
                      |++|++.. +|++++||+++. ++.++|.|+||+|+|+.++.  ++++|||||+.+
T Consensus        70 G~ivv~~~-~ge~~vKrl~~~-~~~~~L~s~N~~y~pi~~~~~~~~~~IiG~Vv~v  123 (126)
T d1jhfa2          70 GQVVVARI-DDEVTVKRLKKQ-GNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGV  123 (126)
T ss_dssp             TSEEEEEE-TTEEEEEEEEEE-TTEEEEECSSTTCCCEEEETTTSCEEEEEEEEEE
T ss_pred             CCEEEEEE-CCEEEEEEEEEC-CCEEEEECCCCCCCCEECCCCCCCEEEEEEEEEE
T ss_conf             98999999-999999999982-9999996478679976816888958999999999


SCOP domain information

class: All beta proteins
fold: LexA/Signal peptidase
superfamily: LexA/Signal peptidase
family: LexA-related
domain: LexA C-terminal domain
species: Escherichia coli [TaxId: 562]