HHSEARCH alignment of GI: 254780444 and SCOP domain: d1t56a1

Alignment

Probab=90.49  E-value=0.23  Score=25.98  Aligned_cols=38  Identities=21%  Similarity=0.272  Sum_probs=32.1

Q ss_pred             CHHHHHHHHHHHHHHCCC---CHHHHHHHHCCCHHHHHHHH
Q ss_conf             589999999999996499---98899998289987988997
Q gi|254780444|r    5 SHKKIWEAIDRMAERHNL---TPSGLARKAGLDPTSFNKSK   42 (223)
Q Consensus         5 ~~~~i~~~i~~l~~~~gl---s~~~lA~~~Gv~~~ti~~~~   42 (223)
                      +++.|.++-..+..+.|+   |-+++|+++|++++++.++.
T Consensus         4 ~r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t~Y~~F   44 (73)
T d1t56a1           4 RELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYF   44 (73)
T ss_dssp             HHHHHHHHHHHHHHHSCGGGCCHHHHHHHHTCCHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHC
T ss_conf             99999999999999759150779999998698888998888

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Tetracyclin repressor-like, N-terminal domain
domain: Ethr repressor
species: Mycobacterium tuberculosis [TaxId: 1773]