HHSEARCH alignment of GI: 254780444 and SCOP domain: d1ui5a1

Alignment

Probab=90.20  E-value=0.51  Score=23.70  Aligned_cols=40  Identities=18%  Similarity=0.162  Sum_probs=32.4

Q ss_pred             CCCHHHHHHHHHHHHHHCCC---CHHHHHHHHCCCHHHHHHHH
Q ss_conf             75589999999999996499---98899998289987988997
Q gi|254780444|r    3 SFSHKKIWEAIDRMAERHNL---TPSGLARKAGLDPTSFNKSK   42 (223)
Q Consensus         3 ~~~~~~i~~~i~~l~~~~gl---s~~~lA~~~Gv~~~ti~~~~   42 (223)
                      .-|+++|..+-..+..+.|+   |-.++|+++|++++++.++.
T Consensus         4 ~~~r~~il~aa~~l~~~~G~~~~si~~Ia~~agvs~~~~y~~F   46 (71)
T d1ui5a1           4 EQTRATIIGAAADLFDRRGYESTTLSEIVAHAGVTKGALYFHF   46 (71)
T ss_dssp             TTHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHTCCHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHC
T ss_conf             9999999999999999859462679999998794876999898

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Tetracyclin repressor-like, N-terminal domain
domain: A-factor receptor homolog CprB
species: Streptomyces coelicolor [TaxId: 1902]