HHSEARCH alignment of GI: 254780444 and SCOP domain: d1uxda_

Alignment

Probab=90.67  E-value=0.23  Score=25.89  Aligned_cols=51  Identities=16%  Similarity=0.115  Sum_probs=35.3

Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf             998899998289987988997515788-755779899999873218752100
Q gi|254780444|r   22 LTPSGLARKAGLDPTSFNKSKRFGIEG-RNRWPSTESIFKILAATNETICQL   72 (223)
Q Consensus        22 ls~~~lA~~~Gv~~~ti~~~~~~~~~g-~~r~p~~~~l~kia~~~~v~~~~l   72 (223)
                      +|-.++|+.+|+|.+|+|+..++.... +-..-..+.+.++++.+|-.++..
T Consensus         1 vTl~diA~~agvS~sTVSrvLn~~~~~~~vs~~tr~rV~~~a~~lgY~pn~~   52 (59)
T d1uxda_           1 MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAV   52 (59)
T ss_dssp             CCHHHHHHHHTSCTTHHHHHHHTCGGGTTCTTTTHHHHHHHHHHHTCCCCSC
T ss_pred             CCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHH
T ss_conf             9799999997969999999984998767579999999999999988796999

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: GalR/LacI-like bacterial regulator
domain: Fructose repressor (FruR), N-terminal domain
species: Escherichia coli [TaxId: 562]