HHSEARCH alignment of GI: 254780444 and SCOP domain: d1v7ba1

Alignment

Probab=94.39  E-value=0.08  Score=28.91  Aligned_cols=42  Identities=17%  Similarity=0.131  Sum_probs=37.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHCCC---CHHHHHHHHCCCHHHHHHHH
Q ss_conf             9775589999999999996499---98899998289987988997
Q gi|254780444|r    1 MTSFSHKKIWEAIDRMAERHNL---TPSGLARKAGLDPTSFNKSK   42 (223)
Q Consensus         1 ~~~~~~~~i~~~i~~l~~~~gl---s~~~lA~~~Gv~~~ti~~~~   42 (223)
                      |..-++++|..+-.++..+.|+   |-.++|+++|++++++.++.
T Consensus         1 Mr~~~r~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~t~Y~~F   45 (74)
T d1v7ba1           1 MRTSKKEMILRTAIDYIGEYSLETLSYDSLAEATGLSKSGLIYHF   45 (74)
T ss_dssp             CCSCHHHHHHHHHHHHHHHSCSTTCCHHHHHHHHCSCHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHC
T ss_conf             968999999999999999859563579999988496922385507

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Tetracyclin repressor-like, N-terminal domain
domain: Transcriptional regulator Cgl2612
species: Corynebacterium glutamicum [TaxId: 1718]