HHSEARCH alignment of GI: 254780444 and SCOP domain: d1x57a1

Alignment

Probab=98.82  E-value=8.6e-09  Score=74.05  Aligned_cols=60  Identities=18%  Similarity=0.140  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf             99999999999649998899998289987988997515788755779899999873218752100
Q gi|254780444|r    8 KIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQL   72 (223)
Q Consensus         8 ~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l   72 (223)
                      +|+++|+.+|+++|+||.+||+++|++.+++++|++|...     |+.+.|.++++++++++...
T Consensus         6 ~iG~~I~~~R~~~gltq~~lA~~~gis~~~is~~E~G~~~-----p~~~~l~~la~~l~v~l~~~   65 (78)
T d1x57a1           6 EVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAI-----PNNQVLGKIERAIGLKLRGK   65 (78)
T ss_dssp             HHHHHHHHHHHTTTCCHHHHHHHHTSCHHHHHHHHHTCSC-----CCHHHHHHHHHHHTBCCSST
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCCC-----CCHHHHHHHHHHHCCCCCCC
T ss_conf             9999999999985997267887188789999999806779-----99999999999909966456

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: EDF1-like
domain: Endothelial differentiation-related factor 1, EDF1
species: Human (Homo sapiens) [TaxId: 9606]