HHSEARCH alignment of GI: 254780444 and SCOP domain: d2fx0a1

Alignment
>d2fx0a1 a.4.1.9 (A:4-76) Hemolysin II regulatory protein, HlyIIR {Bacillus cereus [TaxId: 1396]}
Probab=92.63  E-value=0.2  Score=26.28  Aligned_cols=39  Identities=10%  Similarity=0.089  Sum_probs=32.5

Q ss_pred             CHHHHHHHHHHHHHHCCC---CHHHHHHHHCCCHHHHHHHHH
Q ss_conf             589999999999996499---988999982899879889975
Q gi|254780444|r    5 SHKKIWEAIDRMAERHNL---TPSGLARKAGLDPTSFNKSKR   43 (223)
Q Consensus         5 ~~~~i~~~i~~l~~~~gl---s~~~lA~~~Gv~~~ti~~~~~   43 (223)
                      |+++|.++-.+|..+.|+   |-.++|+.+|++++++.++..
T Consensus         5 tr~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~~~Y~~F~   46 (73)
T d2fx0a1           5 TMENILKAAKKKFGERGYEGTSIQEIAKEAKVNVAMASYYFN   46 (73)
T ss_dssp             HHHHHHHHHHHHHHHHCTTTCCHHHHHHHHTSCHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCC
T ss_conf             999999999999998693517699999987848649998884


SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Tetracyclin repressor-like, N-terminal domain
domain: Hemolysin II regulatory protein, HlyIIR
species: Bacillus cereus [TaxId: 1396]