HHSEARCH alignment of GI: 254780444 and SCOP domain: d2hsga1

Alignment
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=90.64  E-value=0.24  Score=25.76  Aligned_cols=46  Identities=11%  Similarity=0.096  Sum_probs=31.0

Q ss_pred             CCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHH---HHHHHHHCCCCCCC
Q ss_conf             9998899998289987988997515788755779899---99987321875210
Q gi|254780444|r   21 NLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTES---IFKILAATNETICQ   71 (223)
Q Consensus        21 gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~---l~kia~~~~v~~~~   71 (223)
                      ++|-.++|+++|+|.+|+++..++...     .+-++   +.++++.+|-.++.
T Consensus         1 NvTi~dvA~~agvS~~TVSr~Ln~~~~-----Vs~~tr~rV~~aa~~lgY~pn~   49 (57)
T d2hsga1           1 NVTIYDVAREASVSMATVSRVVNGNPN-----VKPSTRKKVLETIERLGYRPNA   49 (57)
T ss_dssp             CCCHHHHHHHTTSCHHHHHHHHTTCTT-----SCHHHHHHHHHHHHHHTCCSCH
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHCCCCC-----CCHHHHHHHHHHHHHHCCCCCH
T ss_conf             969999998989599999999689886-----7989999999999998869799


SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: GalR/LacI-like bacterial regulator
domain: Glucose-resistance amylase regulator CcpA, N-terminal domain
species: Bacillus megaterium [TaxId: 1404]