HHSEARCH alignment of GI: 254780444 and SCOP domain: d2jn6a1

Alignment

Probab=93.59  E-value=0.051  Score=30.18  Aligned_cols=41  Identities=10%  Similarity=0.129  Sum_probs=31.8

Q ss_pred             CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHC
Q ss_conf             55899999999999964999889999828998798899751
Q gi|254780444|r    4 FSHKKIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRF   44 (223)
Q Consensus         4 ~~~~~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~   44 (223)
                      .|.+-=.++++-..+..|.|.+++|+..||+++||.+|.+.
T Consensus         6 Ys~EfK~~aV~l~~~~~g~s~~~vA~~lGIs~~tl~~W~k~   46 (89)
T d2jn6a1           6 YSEEFKRDAVALYENSDGASLQQIANDLGINRVTLKNWIIK   46 (89)
T ss_dssp             CCHHHHHHHHHHHTTGGGSCHHHHHHHHTSCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf             99999999999999829985999999979898899999999

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Cgl2762-like
domain: Uncharacterized protein Cgl2762
species: Corynebacterium glutamicum [TaxId: 1718]