HHSEARCH alignment of GI: 254780444 and SCOP domain: d2ofya1

Alignment

Probab=98.63  E-value=3.9e-08  Score=69.77  Aligned_cols=65  Identities=11%  Similarity=0.092  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             99999999999964999889999828998798899751578875577989999987321875210000111
Q gi|254780444|r    7 KKIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLLDLPF   77 (223)
Q Consensus         7 ~~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~~~~~   77 (223)
                      +.|+++|+++|+  |+|+++||+++|++++++++|++|.    .+.|+.++|.+||+++++++++|+....
T Consensus        13 ~~lG~~ir~~R~--~~t~~eLA~~~Gvs~~~ls~iE~G~----~~~ps~~tl~kia~~L~v~~~~Ll~~~~   77 (82)
T d2ofya1          13 QRLGELLRSARG--DMSMVTVAFDAGISVETLRKIETGR----IATPAFFTIAAVARVLDLSLDDVAAVVT   77 (82)
T ss_dssp             HHHHHHHHHHHT--TSCHHHHHHHHTCCHHHHHHHHTTC----CSSCBHHHHHHHHHHTTCCHHHHHTTCC
T ss_pred             HHHHHHHHHHHH--CCCHHHHHHHHCCCHHHHHHHHCCC----CCCCCHHHHHHHHHHHCCCHHHHHHHCC
T ss_conf             999999999998--0799999989717999999998298----6788899999999998988999985547

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: SinR domain-like
domain: Putative transcriptional regulator RHA1 ro04071
species: Rhodococcus sp. RHA1 [TaxId: 101510]