HHSEARCH alignment of GI: 254780444 and SCOP domain: d2oi8a1

Alignment
>d2oi8a1 a.4.1.9 (A:8-86) Putative regulatory protein Sco4313 {Streptomyces coelicolor [TaxId: 1902]}
Probab=90.87  E-value=0.23  Score=25.98  Aligned_cols=38  Identities=8%  Similarity=0.105  Sum_probs=32.0

Q ss_pred             CHHHHHHHHHHHHHHCCC---CHHHHHHHHCCCHHHHHHHH
Q ss_conf             589999999999996499---98899998289987988997
Q gi|254780444|r    5 SHKKIWEAIDRMAERHNL---TPSGLARKAGLDPTSFNKSK   42 (223)
Q Consensus         5 ~~~~i~~~i~~l~~~~gl---s~~~lA~~~Gv~~~ti~~~~   42 (223)
                      ++++|.++-.++..+.|+   |..++|+.+|++++++.++.
T Consensus        10 ~r~~il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~Y~~F   50 (79)
T d2oi8a1          10 VRAEIKDHAWEQIATAGASALSLNAIAKRMGMSGPALYRYF   50 (79)
T ss_dssp             HHHHHHHHHHHHHHHHCTTSCCHHHHHHHTTCCHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHC
T ss_conf             99999999999999869030679999998679977445516


SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Tetracyclin repressor-like, N-terminal domain
domain: Putative regulatory protein Sco4313
species: Streptomyces coelicolor [TaxId: 1902]