HHsearch alignment for GI: 254780445 and conserved domain: COG0180

Probab=95.60  E-value=0.0048  Score=39.21  Aligned_cols=69  Identities=29%  Similarity=0.281  Sum_probs=36.9

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHH-----CCC---CCEEEEECCCC--CEECCCC-CCHHCC
Q ss_conf             35454332222233344310025544421112455444-331-----178---40000130378--2621345-300001
Q gi|254780445|r  570 ACTHTILLGKDPKLAWPADVYLEGSDQHRGWFQHSLLE-SCA-----TRG---STPFTSLITHG--FSVDENG-EKMSKS  637 (963)
Q Consensus       570 g~s~~~~~~~~~~~~~PaD~~~eG~Dq~RgWF~s~ll~-~~~-----~~~---~~Pfk~v~~hG--~vld~~G-~KMSKS  637 (963)
T Consensus       129 Gl~~YPvlqAADILl~~a~~VPVG~DQ~----qHleLtRDiA~rfn~~y~~~f~~P--~~~~~~~~~i~gL~g~~KMSkS  202 (314)
T COG0180         129 GLLTYPVLQAADILLYQATLVPVGEDQD----QHLELTRDIARRFNHLYGEVFPLP--EALISKVARLPGLDGPGKMSKS  202 (314)
T ss_pred             CCHHCCHHHHHHHHHCCCCEECCCCCCH----HHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCC
T ss_conf             0210549988876502687510488853----999999999999874466753786--0014477746478999866666


Q ss_pred             CCC-CCCH
Q ss_conf             234-4333
Q gi|254780445|r  638 KGN-VVFP  644 (963)
Q Consensus       638 ~GN-vi~p  644 (963)
T Consensus       203 ~~ns~I~L  210 (314)
T COG0180         203 DPNSAIFL  210 (314)
T ss_pred             CCCCEEEC
T ss_conf             99982450