HHsearch alignment for GI: 254780445 and conserved domain: PRK00133
>PRK00133 metG methionyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=607.96 Aligned_cols=478 Identities=26% Similarity=0.377 Sum_probs=353.7
Q ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHH
Q ss_conf 84899628225588976215778566878998767089826788882444208999999987655998334899999999
Q gi|254780445|r 54 KNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVPGWDCHGLPIEWKVENEYLAKGKKKDDIPVNEFRQA 133 (963)
Q Consensus 54 ~~f~l~dgPPy~nG~lH~GH~~n~~~kDi~~Ry~rm~G~~Vl~~~GwD~hGLPiE~~vek~l~~~~~~~~~~~~~~~~~~ 133 (963)
T Consensus 2 k~~~iTt~ipY~Ng~~HiGH~~~~i~aDv~aRy~Rl~G~~v~f~~GtDeHG~~i~~~A~~~----g-----~tp~----- 67 (666)
T PRK00133 2 RKILVTCALPYANGPIHLGHLLEYIQADIWVRYQRMRGHEVLFVCADDAHGTPIMLKAEKE----G-----ITPE----- 67 (666)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHC----C-----CCHH-----
T ss_conf 8779817987888984312467699999999999836995498474278848999999985----9-----9999-----
Q ss_pred HHHHHHHHHHHHHHHHHHCCEEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCCCCHHHEEEEE
Q ss_conf 99999999999999999706077636981157767989999999999987961103430220574357365002101321
Q gi|254780445|r 134 CRDSASAWVKIQSKEFQRLGIVGDFENPYTTMTRESEAQIASELLKIAESDQIYRGIKPIMWSIAEQTTLAEAEIEYHDV 213 (963)
Q Consensus 134 c~~~a~~~i~~~~~~~~rlG~~~Dw~~~y~T~dp~y~~~~~~~F~~l~~kGliyr~~~pV~w~p~~~T~La~~Evey~d~ 213 (963)
T Consensus 68 --e~~d~~~~~~~~~~~~l~Is~D--~f~rTt~~~h~~~vq~~f~~l~~~G~iy~~~~~~~Yc~~~e~fl~Dr~V~---G 140 (666)
T PRK00133 68 --ELIARYHAEHKRDFAGFGISFD--NYGSTHSEENRELAQEIYLKLKENGYIYERTIEQLYDPEKGMFLPDRFVK---G 140 (666)
T ss_pred --HHHHHHHHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCEEE---E
T ss_conf --9999999999999998399578--78578988999999999999997899897403555668756552542342---0
Q ss_pred ECCEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHH
Q ss_conf 05779998330375311220011000000578865445322776745899830665311112374355121118888876
Q gi|254780445|r 214 DSDSILVGFPVKSSADYLIKSQIVIWTTTPWTIPGNRAIAFSSNHQYGLYDVISCSGQHTFDTGKKLIISKNLAQSIANQ 293 (963)
Q Consensus 214 ~~~s~~v~F~l~~~~~~~~~~~~~iwTTrP~Tl~~n~ai~v~p~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~ 293 (963)
T Consensus 141 -------------------------------------------------------------------------------- 140 (666)
T PRK00133 141 -------------------------------------------------------------------------------- 140 (666)
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCEE
Q ss_conf 09851784100111112857543137866512551144322332244540564057898898998760521221002203
Q gi|254780445|r 294 TNVKIALVCDVKAEDLSKTMCSHPLKKLGYTFSVPLIDAEYVANDCGTGFVHVAPSHGVEDFTAWNEAKDILLNRSVDIK 373 (963)
Q Consensus 294 ~~~~~~~~~~~~g~~l~g~~~~~Pl~~~~~~~~~pi~~~d~V~~~~GTG~Vh~aPahg~~Dy~~~~~~~~~~~~~~~~l~ 373 (963)
T Consensus 141 ----------------------------------------------------tCP~C~~~~~~-----GD~--------- 154 (666)
T PRK00133 141 ----------------------------------------------------TCPKCGAEDQY-----GDN--------- 154 (666)
T ss_pred ----------------------------------------------------ECCCCCCHHHC-----CCC---------
T ss_conf ----------------------------------------------------25777871204-----874---------
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEC
Q ss_conf 43023445510243100178632113554445675452356647982100000012211321013203333102366302
Q gi|254780445|r 374 VPSPVDGRGFYTTEAPGFSGARVLDDAGEKGNANEVVIAALINACAILNRSIVKHSYPHSWRSKKPIIFRTTSQWFLHMD 453 (963)
Q Consensus 374 ~~~~vd~~G~~~~~~~~~~G~~v~~~~~~~~~a~~~ii~~L~e~g~l~~~~~~~H~yP~cwR~~~pii~r~~~QWFi~~d 453 (963)
T Consensus 155 --C---------e~----cG~~~-~-------p~-----eL~--------------~p~~~~~g~~~e~~~~e~~ff~Ls 192 (666)
T PRK00133 155 --C---------EV----CGATY-S-------PT-----ELI--------------NPKSAISGATPVLKESEHFFFKLP 192 (666)
T ss_pred --C---------CC----CCCCC-C-------CH-----HHC--------------CCCCCCCCCCCEEECCCCHHHHHH
T ss_conf --2---------24----56516-7-------34-----423--------------864345798516603533331387
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH-CCCCCCCCCCCCC-CCCEEEEECCCCCEEECCCHHHHHHHHHH
Q ss_conf 245542368999987520000024443432024430-4320000112345-67225898258847325211244421222
Q gi|254780445|r 454 KKLGDGSTLRSRALSEVEKIRFFPSSGKNRLRSMIE-NRPDWLLSRQRNW-GVPICFFYNEKGEILLDKAINDRIIKTFK 531 (963)
Q Consensus 454 ~~~~~~~~~k~~~l~~i~~v~~~P~~~k~r~~~~i~-~~~DW~ISRqR~W-G~PIPi~~~e~~~~~~~~~~~~~i~~~~~ 531 (963)
T Consensus 193 ~-------~~~~L~~~~~~~~~-~~~~~n~~~~~l~~gL~D~~ISR~~~W~GipvP~---~~~----------------- 244 (666)
T PRK00133 193 D-------FEEFLKEWTRSGAL-QPNVANKMKEWLEEGLQDWDISRDAPYFGFEIPG---APG----------------- 244 (666)
T ss_pred H-------HHHHHHHHHCCCCC-CHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCC---CCC-----------------
T ss_conf 7-------77899875104889-8789999999985788775304027844458889---876-----------------
Q ss_pred HCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCCCC-----CCCCCCCCCCH
Q ss_conf 118874335640111468878875545664210000333545-------433222223334431-----00255444211
Q gi|254780445|r 532 DQGSDAWFSEGSRDFFLGDRASEPWIQSKDILDVWFDSACTH-------TILLGKDPKLAWPAD-----VYLEGSDQHRG 599 (963)
Q Consensus 532 ~~g~d~~~~~~~~~~~~~~~~~~~~~r~~DvlDvWfDSg~s~-------~~~~~~~~~~~~PaD-----~~~eG~Dq~Rg 599 (963)
T Consensus 245 -----------------------------kv~YVW~DA~igYis~t~~~~~~~~~~~~~~W~~d~~~~~vhfiGKDii~- 294 (666)
T PRK00133 245 -----------------------------KVFYVWLDAPIGYISSTKNLCDKRGLDWDEYWKKDSDTELYHFIGKDIIY- 294 (666)
T ss_pred -----------------------------EEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEECCCCHHH-
T ss_conf -----------------------------48999615645377764433143565587638899876336753443114-
Q ss_pred HHHHHHHHHHHCC-C-CCEEEEECCCCCEECCCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHHH-CCCC-CCCCCCCHH
Q ss_conf 1245544433117-8-4000013037826213453000012344333664113675788788871-7876-655443102
Q gi|254780445|r 600 WFQHSLLESCATR-G-STPFTSLITHGFSVDENGEKMSKSKGNVVFPEEIISESGADVLRYWAVN-SDYH-DDQRLGKNI 675 (963)
Q Consensus 600 WF~s~ll~~~~~~-~-~~Pfk~v~~hG~vld~~G~KMSKS~GNvi~p~~ii~~yGaD~lR~~~~~-~~~~-~d~~~~~~~ 675 (963)
T Consensus 295 -FH~i~wPa~L~~~g~~lP-~~v~~hg~l~-~~G~KmSKS~Gnvv~p~~~l~~yg~D~lRY~l~~~~p~~~~D~dfs~~~ 371 (666)
T PRK00133 295 -FHTLFWPAMLEGAGYRLP-TNVFAHGFLT-VEGAKMSKSRGTFIWARTYLDHLDPDYLRYYLAAKLPSRIDDIDFNWED 371 (666)
T ss_pred -HHHHHHHHHHHHCCCCCC-CCCCCCCCEE-ECCEEEECCCCEEEEHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCHHH
T ss_conf -647679999984677888-6121146487-7880600126717617999986696453020331078987677869999
Q ss_pred HHHHH--HHHHHHCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 56777--640000011000001224-444567310111278887543689999998898765401226688998786302
Q gi|254780445|r 676 IQTNI--DTYRKLRNTIRWMLGMLA-HDTGNEPSLADMPALEQLMLHRLTELDQVVREAYDAFNFKEVVRQLTNFSNAEL 752 (963)
Q Consensus 676 l~~~~--~~~~kl~Nt~rf~l~~l~-~~~~~~~~~~~l~~~DkwiLskl~~~i~~v~~~~e~~~f~~a~~~i~~F~~~dL 752 (963)
T Consensus 372 ~~~r~NsdLan~lGNl~~R~~~~~~k~~~g~vp~----~~~d~~l~~~~~~~~~~~~~~~~~~~~~~Al~~i~~l~~--~ 445 (666)
T PRK00133 372 FQQRVNSDLVGKLVNFASRAAGFINKRFDGKLPD----ELADPELLEEFRAAAESIAEAYEAREFRKALREIMALAD--R 445 (666)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH--H
T ss_conf 9999868888766689999999999865997899----745899999999999999999981069999999999999--9
Q ss_pred CCCHHHCCCHHHCCCCCCCHHHHHHHHHHHH---HHHHHHHHHCCHHHHHHHHHHHHCCC
Q ss_conf 4001010201222789980899999999999---99999999700044899999986388
Q gi|254780445|r 753 SSFYFDIRKDSLYCDSPSSLKRLSSIAVIRI---LCRHLIIWIAPILPFTAEEAWLSLNP 809 (963)
Q Consensus 753 S~~Yld~~Kdrly~~~~~s~~R~s~~~~L~~---il~~l~~lLaPi~P~~aEEiw~~l~~ 809 (963)
T Consensus 446 ~NkYi~~~~P--W~L~K~d~~~~~l~~Vl~~~le~lr~laiLL~PfmP~~a~ki~~~Lg~ 503 (666)
T PRK00133 446 ANKYVDDKEP--WKLAKQEGEDAALQEVCSVGLNLFRALAIYLKPVLPELAERAEAFLNV 503 (666)
T ss_pred HHHHHHHCCC--HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
T ss_conf 9888774487--655368566899999999999999999997238673789999998098