HHsearch alignment for GI: 254780445 and conserved domain: PRK00390

>PRK00390 leuS leucyl-tRNA synthetase; Validated.
Probab=100.00  E-value=0  Score=1291.39  Aligned_cols=649  Identities=24%  Similarity=0.345  Sum_probs=508.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             88899689779999999864761445405688884899628225588976215778566878998767089826788882
Q gi|254780445|r   21 PMRAKLPQKESELITYWQKIRLFDKIRESAVGRKNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVPGW  100 (963)
Q Consensus        21 p~r~~~~~~E~~~~~~W~~~~~f~~~~~~~~~~~~f~l~dgPPy~nG~lH~GH~~n~~~kDi~~Ry~rm~G~~Vl~~~Gw  100 (963)
T Consensus         2 ~~~Y~~~~iE~kw~~~W~~~~~f~~~---~~~~~k~yvld~~PYpsG~lH~GH~~~~ti~Dii~Rykrm~G~~Vl~p~Gw   78 (822)
T PRK00390          2 QMRYNPKEIEKKWQKYWEENKTFKVT---EDSKPKYYVLDMFPYPSGGLHMGHVRNYTIGDVIARYKRMQGYNVLHPMGW   78 (822)
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCC---CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             88788699999999999856982489---778998079377999898611325564789999999987189963898973


Q ss_pred             CCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEECCCHHHHHHHHHHHHHH
Q ss_conf             44420899999998765599833489999999999999999999999999706077636981157767989999999999
Q gi|254780445|r  101 DCHGLPIEWKVENEYLAKGKKKDDIPVNEFRQACRDSASAWVKIQSKEFQRLGIVGDFENPYTTMTRESEAQIASELLKI  180 (963)
Q Consensus       101 D~hGLPiE~~vek~l~~~~~~~~~~~~~~~~~~c~~~a~~~i~~~~~~~~rlG~~~Dw~~~y~T~dp~y~~~~~~~F~~l  180 (963)
T Consensus        79 D~~GLPaE~~aik~----~~-----~-------p~~~t~~nI~~~k~q~k~lG~~~DW~r~~~T~dp~y~~~~qw~F~~l  142 (822)
T PRK00390         79 DAFGLPAENAAIKT----GT-----H-------PAEWTYENIANMKKQLKSLGFSYDWSREIATCDPEYYKWTQWLFLKL  142 (822)
T ss_pred             CCCCCHHHHHHHHH----CC-----C-------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             66886898999994----99-----8-------89999999999999999839543068987757877999999999999


Q ss_pred             HHCCCEECCCCEEEECCCCCCCCCCHHHE-------------------------EEE-----------------------
Q ss_conf             98796110343022057435736500210-------------------------132-----------------------
Q gi|254780445|r  181 AESDQIYRGIKPIMWSIAEQTTLAEAEIE-------------------------YHD-----------------------  212 (963)
Q Consensus       181 ~~kGliyr~~~pV~w~p~~~T~La~~Eve-------------------------y~d-----------------------  212 (963)
T Consensus       143 ~ekGliyr~~~~V~Wcp~~~T~LAn~eV~~G~~~r~~~~V~~k~~~qw~~kit~Ya~~Ll~~l~~l~~wP~~vk~mQ~nW  222 (822)
T PRK00390        143 YEKGLAYRKESPVNWCPVDQTVLANEQVIDGRSWRSGAPVEKKELPQWFLKITDYADELLDDLDELDGWPEKVKTMQRNW  222 (822)
T ss_pred             HHCCCEEECCEEEECCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHCCC
T ss_conf             98899795232420079768776504441476434687046630440355200758887502100246607776653043


Q ss_pred             -EECCEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHH
Q ss_conf             -1057799983303753112200110000005788654453227767458998306653111123743551211188888
Q gi|254780445|r  213 -VDSDSILVGFPVKSSADYLIKSQIVIWTTTPWTIPGNRAIAFSSNHQYGLYDVISCSGQHTFDTGKKLIISKNLAQSIA  291 (963)
Q Consensus       213 -~~~~s~~v~F~l~~~~~~~~~~~~~iwTTrP~Tl~~n~ai~v~p~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~  291 (963)
T Consensus       223 IG~s~g~~v~F~~~~~~-----~~l~v~TTrP~Tl~G~t~~~v~p~h~~~~~~~--~~~----~~~~~~------~~~~~  285 (822)
T PRK00390        223 IGRSEGAEVTFKVKGSD-----EKLEVFTTRPDTLFGATYLVLAPEHPLAEKLA--EQN----PAVAAF------IEECK  285 (822)
T ss_pred             CCCEEEEEEEEECCCCC-----CEEEEEECCHHHHCCCCEEEEECCCHHHHHHH--HCC----HHHHHH------HHHHH
T ss_conf             34200079863316998-----55999968833522862799937978999998--448----999999------99987


Q ss_pred             HHCCCC-EEEEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCC
Q ss_conf             760985-1784100111112857543137866512551144322332244540564057898898998760521221002
Q gi|254780445|r  292 NQTNVK-IALVCDVKAEDLSKTMCSHPLKKLGYTFSVPLIDAEYVANDCGTGFVHVAPSHGVEDFTAWNEAKDILLNRSV  370 (963)
Q Consensus       292 ~~~~~~-~~~~~~~~g~~l~g~~~~~Pl~~~~~~~~~pi~~~d~V~~~~GTG~Vh~aPahg~~Dy~~~~~~~~~~~~~~~  370 (963)
T Consensus       286 ~~~~~e~~~~~~ek~G~~-~G~~~~~P~~~~----~iPI~~ad~V~~~~GTG~V~~~PaHd~~D~~~---------a~k~  351 (822)
T PRK00390        286 NKSDLERTLATKEKTGVF-TGLYAIHPLTGE----KIPVWIANYVLMDYGTGAVMAVPAHDQRDFEF---------AKKY  351 (822)
T ss_pred             HCCHHHHHHHHCEEECEE-CCCEEECCCCCC----EEEEEEECCCCCCCCCCCEEECCCCCHHHHHH---------HHHC
T ss_conf             124366655315010100-585897778896----55699625252457877267568788789999---------9982


Q ss_pred             CEEEEECCCC---CCCCCCC-----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEE
Q ss_conf             2034302344---5510243-----1001786321135544456754523566479821000000122113210132033
Q gi|254780445|r  371 DIKVPSPVDG---RGFYTTE-----APGFSGARVLDDAGEKGNANEVVIAALINACAILNRSIVKHSYPHSWRSKKPIIF  442 (963)
Q Consensus       371 ~l~~~~~vd~---~G~~~~~-----~~~~~G~~v~~~~~~~~~a~~~ii~~L~e~g~l~~~~~~~H~yP~cwR~~~pii~  442 (963)
T Consensus       352 ~Lpi~~Vi~~~~~~~~~~~~G~lins~~~~Gl~~~-------eA~~~ii~~L~~~g~g----------------~~~i~-  407 (822)
T PRK00390        352 GLPIKQVIGGDVSEEAYTEDGVLINSGELDGLDSE-------EAKEAIIAWLEEKGLG----------------KRKVN-  407 (822)
T ss_pred             CCCCEEEECCCCCCCCCCCCEEEECCHHCCCCCHH-------HHHHHHHHHHHHCCCC----------------CCCCC-
T ss_conf             99824763788766545577148763421786468-------8999999999977998----------------66341-


Q ss_pred             EEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCH
Q ss_conf             33102366302245542368999987520000024443432024430432000011234567225898258847325211
Q gi|254780445|r  443 RTTSQWFLHMDKKLGDGSTLRSRALSEVEKIRFFPSSGKNRLRSMIENRPDWLLSRQRNWGVPICFFYNEKGEILLDKAI  522 (963)
Q Consensus       443 r~~~QWFi~~d~~~~~~~~~k~~~l~~i~~v~~~P~~~k~r~~~~i~~~~DW~ISRqR~WG~PIPi~~~e~~~~~~~~~~  522 (963)
T Consensus       408 --------------------------------y-------r-------LRDW~iSRQRyWG~PIPi~~c~~~~~v~v~e~  441 (822)
T PRK00390        408 --------------------------------Y-------R-------LRDWGISRQRYWGEPIPIIHCEDCGVVPVPED  441 (822)
T ss_pred             --------------------------------E-------E-------CCCCEEECCCCCCCCEEEEEECCCCEEEEEHH
T ss_conf             --------------------------------0-------1-------26632211202578403899578977871078


Q ss_pred             H--HHHHHHH--HHCCCCC-CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------------CCCCCCCC
Q ss_conf             2--4442122--2118874-3356401114688788755456642100003335454332------------22223334
Q gi|254780445|r  523 N--DRIIKTF--KDQGSDA-WFSEGSRDFFLGDRASEPWIQSKDILDVWFDSACTHTILL------------GKDPKLAW  585 (963)
Q Consensus       523 ~--~~i~~~~--~~~g~d~-~~~~~~~~~~~~~~~~~~~~r~~DvlDvWfDSg~s~~~~~------------~~~~~~~~  585 (963)
T Consensus       442 ~Lpv~LPe~~~~~~~g~~PL~~~~~w~~-~~c~~~g~~~~RetDt~DtW~dS--sWY~~ry~~p~~~~~~~d~~~~~yw~  518 (822)
T PRK00390        442 DLPVVLPEDVVPDGTGESPLAKHPEWVN-VTCPKCGKPARRETDTMDTFVGS--SWYYLRYTDPHNDEAMFDKEAANYWL  518 (822)
T ss_pred             HCCCCCHHHEECCCCCCCHHHHCCCCEE-EECCCCCCCCEECCCCCCEEECC--CCEEEECCCCCCCCCCCCHHHHHHCC
T ss_conf             7553460013006889994684700175-21477787214535310201135--44000015776444667977886028


Q ss_pred             CCCCCCCCCCCC--------CHHHHHHHHHHHHCCCCCEEEEECCCCCEECC------------------------CCCC
Q ss_conf             431002554442--------11124554443311784000013037826213------------------------4530
Q gi|254780445|r  586 PADVYLEGSDQH--------RGWFQHSLLESCATRGSTPFTSLITHGFSVDE------------------------NGEK  633 (963)
Q Consensus       586 PaD~~~eG~Dq~--------RgWF~s~ll~~~~~~~~~Pfk~v~~hG~vld~------------------------~G~K  633 (963)
T Consensus       519 PvD~YigG~E-HailHLlYsRF~~~~l~dlg~-~~~~ePF~~l~~qGmVl~~~~~~~~~~~~~~~~v~~~~~~~~~~g~K  596 (822)
T PRK00390        519 PVDQYIGGIE-HAVLHLLYARFFHKVLRDLGL-VSSDEPFKKLLTQGMVLGETYYDERGNWVSPADVEVERDEKRIGGIK  596 (822)
T ss_pred             CCEEECCCHH-HHHHHHHHHHHHHHHHHHCCC-CCCCCCHHHHEECCEEECCCCCCCCCCCCCHHHEEEECCCCCCCCCC
T ss_conf             9614016445-667788888899999987167-55677757750445684254444567766601124204556767761


Q ss_pred             HHCCCCCCCCHHHHHCCCCHHHHHHHHH-HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             0001234433366411367578878887-178766554431025677764000001100000122444456731011127
Q gi|254780445|r  634 MSKSKGNVVFPEEIISESGADVLRYWAV-NSDYHDDQRLGKNIIQTNIDTYRKLRNTIRWMLGMLAHDTGNEPSLADMPA  712 (963)
Q Consensus       634 MSKS~GNvi~p~~ii~~yGaD~lR~~~~-~~~~~~d~~~~~~~l~~~~~~~~kl~Nt~rf~l~~l~~~~~~~~~~~~l~~  712 (963)
T Consensus       597 MSKSkGNvv~P~~ii~~yGADalRl~~l~~ap~~~d~~ws~~~i~g~~rfl~rlw~~~~~------------~~~~~~~~  664 (822)
T PRK00390        597 MSKSKGNVVDPDDIIDKYGADTARLFEMFAGPPEKDLEWSDSGVEGAYRFLQRVWRLVYD------------EGAVAALE  664 (822)
T ss_pred             CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC------------CCCCCCCC
T ss_conf             676578968989998754807999999960885666120487899999999999997304------------44556872


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88875436899999988987654012266889987863024001010201222789980899999999999999999997
Q gi|254780445|r  713 LEQLMLHRLTELDQVVREAYDAFNFKEVVRQLTNFSNAELSSFYFDIRKDSLYCDSPSSLKRLSSIAVIRILCRHLIIWI  792 (963)
Q Consensus       713 ~DkwiLskl~~~i~~v~~~~e~~~f~~a~~~i~~F~~~dLS~~Yld~~Kdrly~~~~~s~~R~s~~~~L~~il~~l~~lL  792 (963)
T Consensus       665 ~d~~l~~~l~~~I~~vt~~~e~~~fn~ai~~l~~f~N-~l~--------------------k~~~~~~l~~~l~~l~rlL  723 (822)
T PRK00390        665 ADKELRRALHKTIKKVTEDIERLRFNTAIAALMELVN-ALS--------------------KAPDRAVLREALEILVRLL  723 (822)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHH--------------------HHHHHHHHHHHHHHHHHHH
T ss_conf             3199999999999999999976677699999999999-998--------------------7251899999999999999


Q ss_pred             CCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHCC
Q ss_conf             000448999999863886773453358899835689
Q gi|254780445|r  793 APILPFTAEEAWLSLNPEAVSVHLELFPIIPLEWQN  828 (963)
Q Consensus       793 aPi~P~~aEEiw~~l~~~~~SI~~~~wP~~~~~~~d  828 (963)
T Consensus       724 aPf~PhiaEElW~~Lg~-~~sV~~~~WP~~de~~l~  758 (822)
T PRK00390        724 APFAPHIAEELWQELGH-EGSIANAPWPEVDEAALV  758 (822)
T ss_pred             HHHHHHHHHHHHHHCCC-CCCEEECCCCCCCHHHHH
T ss_conf             87889999999997799-985645899967878882