HHsearch alignment for GI: 254780445 and conserved domain: PRK01611
>PRK01611 argS arginyl-tRNA synthetase; Reviewed.
Probab=99.13 E-value=6.6e-10 Score=86.69 Aligned_cols=195 Identities=19% Similarity=0.314 Sum_probs=114.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHC-CCCCEEEEECCC---CCEECCCCCCHHCCCCCCCCHHHHHCC--------------
Q ss_conf 00255444211124554443311-784000013037---826213453000012344333664113--------------
Q gi|254780445|r 589 VYLEGSDQHRGWFQHSLLESCAT-RGSTPFTSLITH---GFSVDENGEKMSKSKGNVVFPEEIISE-------------- 650 (963)
Q Consensus 589 ~~~eG~Dq~RgWF~s~ll~~~~~-~~~~Pfk~v~~h---G~vld~~G~KMSKS~GNvi~p~~ii~~-------------- 650 (963)
T Consensus 331 I~V~g~dq~-~hf~~l~~~l~~lG~~~~~~-~~l~h~~~~lv~~~~~~kMStR~G~~v~L~dlldea~~~a~~~~~~~~e 408 (570)
T PRK01611 331 IYVVGADHH-GHFKRLKAALKALGYDPEKL-EVLLHQMVGLVRGGEGVKMSTRAGNVVTLDDLLDEAVERARELVEESEE 408 (570)
T ss_pred EEEECCCHH-HHHHHHHHHHHHCCCCCCCC-EEEEEEEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHH
T ss_conf 999457588-89999999999869996334-4799999875436867644246787458999999999999987633776
Q ss_pred --------CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH--------HHHHHCCCCCCCCCCCCCCCCCCCCHHHH-HHH
Q ss_conf --------6757887888717876655443102567776--------40000011000001224444567310111-278
Q gi|254780445|r 651 --------SGADVLRYWAVNSDYHDDQRLGKNIIQTNID--------TYRKLRNTIRWMLGMLAHDTGNEPSLADM-PAL 713 (963)
Q Consensus 651 --------yGaD~lR~~~~~~~~~~d~~~~~~~l~~~~~--------~~~kl~Nt~rf~l~~l~~~~~~~~~~~~l-~~~ 713 (963)
T Consensus 409 ~~~~ia~~Vg~~Airy~~L~~~~~~~~~Fd~d~~l~~~g~t~~YiQYa~AR~~SIlrK~-~~-~~~~-~~~~~~~l~~~~ 485 (570)
T PRK01611 409 EKEEIAKAVGIDAVRYFDLSRSRDSDYDFDLDLALSFEGNNPPYVQYAHARICSILRKA-AE-EGLA-AAADLSLLTEEE 485 (570)
T ss_pred HHHHHHHHHCHHHHHHHHHCCCCCCCCEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-HC-CCCC-CCCCCCCCCCHH
T ss_conf 78899976341040264440688888222689986323898257889999999999863-12-3454-434333469989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCH---HHHHHHHHHHHHHHHHHH
Q ss_conf 88754368999999889876540122668899878630240010102012227899808---999999999999999999
Q gi|254780445|r 714 EQLMLHRLTELDQVVREAYDAFNFKEVVRQLTNFSNAELSSFYFDIRKDSLYCDSPSSL---KRLSSIAVIRILCRHLII 790 (963)
Q Consensus 714 DkwiLskl~~~i~~v~~~~e~~~f~~a~~~i~~F~~~dLS~~Yld~~Kdrly~~~~~s~---~R~s~~~~L~~il~~l~~ 790 (963)
T Consensus 486 E~~Li~~l~~fp~vv~~a~~~~~Ph~l~~YL~~La~-~Fn~fY~~-~~-vl--~~~~~~~~~~RL~L~~a~~~vL~~gL~ 560 (570)
T PRK01611 486 ELELIKKLAEFPEVVESAAEELEPHRIANYLYELAG-AFHSFYNA-CP-VL--KEEEEEERNARLALVKATAQVLKNGLD 560 (570)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHHHHHC-CC-CC--CCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999998879999999996881899999999999-99999851-98-35--899989999999999999999999864
Q ss_pred HHC
Q ss_conf 970
Q gi|254780445|r 791 WIA 793 (963)
Q Consensus 791 lLa 793 (963)
T Consensus 561 LLG 563 (570)
T PRK01611 561 LLG 563 (570)
T ss_pred CCC
T ss_conf 039