HHsearch alignment for GI: 254780445 and conserved domain: PRK12268

>PRK12268 methionyl-tRNA synthetase; Reviewed.
Probab=100.00  E-value=0  Score=690.33  Aligned_cols=494  Identities=24%  Similarity=0.369  Sum_probs=365.4

Q ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHH
Q ss_conf             848996282255889762157785668-7899876708982678888244420899999998765599833489999999
Q gi|254780445|r   54 KNFTLHDGPPYANGHIHIGHALNKILK-DVIVRSFQMRNFNACFVPGWDCHGLPIEWKVENEYLAKGKKKDDIPVNEFRQ  132 (963)
Q Consensus        54 ~~f~l~dgPPy~nG~lH~GH~~n~~~k-Di~~Ry~rm~G~~Vl~~~GwD~hGLPiE~~vek~l~~~~~~~~~~~~~~~~~  132 (963)
T Consensus         3 ~k~~iTt~~Py~nG~lHiGH~~~~~l~aDi~aRy~R~~G~~v~~~~GtD~hG~~i~~~A~k~----g-----~~p~----   69 (558)
T PRK12268          3 MRILITSAWPYANGPLHLGHLAGSYLPADVYARYQRLKGNEVLFVSGSDEHGTPIELEAEKE----G-----VSPQ----   69 (558)
T ss_pred             CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHC----C-----CCHH----
T ss_conf             51898479988889855231114198999999999837998797584064749999999985----9-----9999----


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCEEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCCCCHHHEEEE
Q ss_conf             99999999999999999970607763698115776798999999999998796110343022057435736500210132
Q gi|254780445|r  133 ACRDSASAWVKIQSKEFQRLGIVGDFENPYTTMTRESEAQIASELLKIAESDQIYRGIKPIMWSIAEQTTLAEAEIEYHD  212 (963)
Q Consensus       133 ~c~~~a~~~i~~~~~~~~rlG~~~Dw~~~y~T~dp~y~~~~~~~F~~l~~kGliyr~~~pV~w~p~~~T~La~~Evey~d  212 (963)
T Consensus        70 ---e~~~~~~~~~~~~~~~lgis~D~--f~rT~~~~~~~~v~~~f~~L~~~G~iy~~~~~~~yc~~~~~fl~d~~v~G--  142 (558)
T PRK12268         70 ---ELADKYHEEHKEDFEKLGISYDN--YTRTTSPEHHELVQEFFLKLYENGYIEKKTIEQAYCPSDGRFLPDRYVEG--  142 (558)
T ss_pred             ---HHHHHHHHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCC--
T ss_conf             ---99999999999999981983776--86689889999999999999988993301353436841123131233154--


Q ss_pred             EECCEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHH
Q ss_conf             10577999833037531122001100000057886544532277674589983066531111237435512111888887
Q gi|254780445|r  213 VDSDSILVGFPVKSSADYLIKSQIVIWTTTPWTIPGNRAIAFSSNHQYGLYDVISCSGQHTFDTGKKLIISKNLAQSIAN  292 (963)
Q Consensus       213 ~~~~s~~v~F~l~~~~~~~~~~~~~iwTTrP~Tl~~n~ai~v~p~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~  292 (963)
T Consensus       143 ----------------------------~cP-------------------------------------------------  145 (558)
T PRK12268        143 ----------------------------TCP-------------------------------------------------  145 (558)
T ss_pred             ----------------------------CCC-------------------------------------------------
T ss_conf             ----------------------------067-------------------------------------------------


Q ss_pred             HCCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCE
Q ss_conf             60985178410011111285754313786651255114432233224454056405789889899876052122100220
Q gi|254780445|r  293 QTNVKIALVCDVKAEDLSKTMCSHPLKKLGYTFSVPLIDAEYVANDCGTGFVHVAPSHGVEDFTAWNEAKDILLNRSVDI  372 (963)
Q Consensus       293 ~~~~~~~~~~~~~g~~l~g~~~~~Pl~~~~~~~~~pi~~~d~V~~~~GTG~Vh~aPahg~~Dy~~~~~~~~~~~~~~~~l  372 (963)
T Consensus       146 --------------------------------------------------------~c~~~~~~-----Gd--~c-----  157 (558)
T PRK12268        146 --------------------------------------------------------YCGYEKAR-----GD--QC-----  157 (558)
T ss_pred             --------------------------------------------------------CCCCCCCC-----CC--HH-----
T ss_conf             --------------------------------------------------------76874356-----73--25-----


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEE
Q ss_conf             34302344551024310017863211355444567545235664798210000001221132101320333310236630
Q gi|254780445|r  373 KVPSPVDGRGFYTTEAPGFSGARVLDDAGEKGNANEVVIAALINACAILNRSIVKHSYPHSWRSKKPIIFRTTSQWFLHM  452 (963)
Q Consensus       373 ~~~~~vd~~G~~~~~~~~~~G~~v~~~~~~~~~a~~~ii~~L~e~g~l~~~~~~~H~yP~cwR~~~pii~r~~~QWFi~~  452 (963)
T Consensus       158 ------e~-----------cg~~-~~-------~~d-----l------i--------~p~~~~~g~~~e~~~~~~~f~~l  193 (558)
T PRK12268        158 ------DN-----------CGAL-LD-------PTD-----L------I--------NPRSKISGSTPEFRETEHFFLDL  193 (558)
T ss_pred             ------HH-----------CCCC-CC-------HHH-----H------C--------CCCCCCCCCCCEEEECCCEEECC
T ss_conf             ------32-----------4764-78-------577-----2------4--------88567789944477345302141


Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH-HCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHH
Q ss_conf             224554236899998752000002444343202443-0432000011234567225898258847325211244421222
Q gi|254780445|r  453 DKKLGDGSTLRSRALSEVEKIRFFPSSGKNRLRSMI-ENRPDWLLSRQRNWGVPICFFYNEKGEILLDKAINDRIIKTFK  531 (963)
Q Consensus       453 d~~~~~~~~~k~~~l~~i~~v~~~P~~~k~r~~~~i-~~~~DW~ISRqR~WG~PIPi~~~e~~~~~~~~~~~~~i~~~~~  531 (963)
T Consensus       194 ~~-------~~~~l~~~~~~~~~~p~~~~~~~~~~l~~~l~D~~ISR~~~WGipiP~~~~~~~~iy--------------  252 (558)
T PRK12268        194 PA-------FQEALRKWIESGTDWPPNVLNFTLNWLKEGLKPRAITRDLPWGIPIPFEGAEGKVFY--------------  252 (558)
T ss_pred             HH-------HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEE--------------
T ss_conf             87-------789999998538877889999999998633756545553878657885556896798--------------


Q ss_pred             HCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCHHHHHHHH-
Q ss_conf             118874335640111468878875545664210000333545433222223334431----002554442111245544-
Q gi|254780445|r  532 DQGSDAWFSEGSRDFFLGDRASEPWIQSKDILDVWFDSACTHTILLGKDPKLAWPAD----VYLEGSDQHRGWFQHSLL-  606 (963)
Q Consensus       532 ~~g~d~~~~~~~~~~~~~~~~~~~~~r~~DvlDvWfDSg~s~~~~~~~~~~~~~PaD----~~~eG~Dq~RgWF~s~ll-  606 (963)
T Consensus       253 -----VW~Da~~~y-is---~~~~~~~~~~~~---------------~~~~~~W~~~~~~~~~f~GkDii~--FH~v~wp  306 (558)
T PRK12268        253 -----VWFDAPIGY-IS---ATKEWAKRKGDP---------------EAWKEFWLDSDTKYYYFIGKDNIP--FHSVIWP  306 (558)
T ss_pred             -----EECCCCCCH-HH---HHHHHHHCCCCH---------------HHHHHHCCCCCCEEEEECCCCCCH--HHHHHHH
T ss_conf             -----865787220-34---336545416985---------------679872789984277643666543--4787999


Q ss_pred             ---HHHHCCCCCEEEEECCCCCEECCCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHHH-CCCCCCCCCCCHHHHHH--H
Q ss_conf             ---43311784000013037826213453000012344333664113675788788871-78766554431025677--7
Q gi|254780445|r  607 ---ESCATRGSTPFTSLITHGFSVDENGEKMSKSKGNVVFPEEIISESGADVLRYWAVN-SDYHDDQRLGKNIIQTN--I  680 (963)
Q Consensus       607 ---~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvi~p~~ii~~yGaD~lR~~~~~-~~~~~d~~~~~~~l~~~--~  680 (963)
T Consensus       307 a~l~a~~~~~~lP-~~i~~~g~~~~-~G~KmSKS~Gnvi~p~~~i~~yg~D~lRy~L~~~~~~~~D~~fs~~~~~~~~N~  384 (558)
T PRK12268        307 AMLLGSGEPYKLP-TAIVSSEYLTY-EGQKFSKSRGWGIWVDDALERLPPDYLRYYLAANAPENSDTDFTWEEFIRRVNS  384 (558)
T ss_pred             HHHHHCCCCCCCC-CEEEEEEEEEE-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf             9997337987788-77877556874-684114557887798999987490777899885488888888799999999999


Q ss_pred             HHHHHHCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
Q ss_conf             6400000110000012-244445673101112788875436899999988987654012266889987863024001010
Q gi|254780445|r  681 DTYRKLRNTIRWMLGM-LAHDTGNEPSLADMPALEQLMLHRLTELDQVVREAYDAFNFKEVVRQLTNFSNAELSSFYFDI  759 (963)
Q Consensus       681 ~~~~kl~Nt~rf~l~~-l~~~~~~~~~~~~l~~~DkwiLskl~~~i~~v~~~~e~~~f~~a~~~i~~F~~~dLS~~Yld~  759 (963)
T Consensus       385 dL~~~~gNl~~R~~~~~~k~~~g~~p~~~~~~~~d~~l~~~~~~~~~~v~~~~e~~~~~~Al~~i~~~~--~~~N~y~~~  462 (558)
T PRK12268        385 ELADKYGNLVNRVLSFIEKNFGGEVPEPGELGEEDEELLEKFQELFKEVGEHYEAIEFKKALEEIMELA--RLANKYLNE  462 (558)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH--HHHHHHHHH
T ss_conf             999999999999999999865897898767985659999999999999999997517999999999999--999999983


Q ss_pred             CCHHHCCCCCCCHH-HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
Q ss_conf             20122278998089-999999999999999999700044899999986388
Q gi|254780445|r  760 RKDSLYCDSPSSLK-RLSSIAVIRILCRHLIIWIAPILPFTAEEAWLSLNP  809 (963)
Q Consensus       760 ~Kdrly~~~~~s~~-R~s~~~~L~~il~~l~~lLaPi~P~~aEEiw~~l~~  809 (963)
T Consensus       463 ~~P--W~l~k~d~~~~~~vl~~~l~~lr~~~ilL~P~mP~~se~i~~~Lg~  511 (558)
T PRK12268        463 KAP--WKLAKTDPERAAAVLYTALNLVKLLAILLYPFLPFSAEKIWEMLGL  511 (558)
T ss_pred             CCC--HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC
T ss_conf             798--5431689999999999999999999999867403999999998499