HHsearch alignment for GI: 254780445 and conserved domain: PRK12556
>PRK12556 tryptophanyl-tRNA synthetase; Provisional.
Probab=96.30 E-value=0.0022 Score=41.55 Aligned_cols=71 Identities=31% Similarity=0.274 Sum_probs=39.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-H-----HCCC---CCEEEEECC-CC-CEECCCCCCHHCCC
Q ss_conf 354543322222333443100255444211124554443-3-----1178---400001303-78-26213453000012
Q gi|254780445|r 570 ACTHTILLGKDPKLAWPADVYLEGSDQHRGWFQHSLLES-C-----ATRG---STPFTSLIT-HG-FSVDENGEKMSKSK 638 (963)
Q Consensus 570 g~s~~~~~~~~~~~~~PaD~~~eG~Dq~RgWF~s~ll~~-~-----~~~~---~~Pfk~v~~-hG-~vld~~G~KMSKS~ 638 (963)
T Consensus 132 GL~~YPvLmAADILly~a~~VPVGeDQ~----QHlEltRdiA~rFN~~yg~~f~~P-~~~i~~~~~~i~gldgkKMSKS~ 206 (328)
T PRK12556 132 GLYTYPILMAADILLFQATHVPVGKDQI----QHIEIARDIATYFNHTFGTTFTLP-EYVIQEEGAILPGLDGRKMSKSY 206 (328)
T ss_pred CCCCCCHHHHCHHHHCCCCEECCCCCHH----HHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCEEECCCCCCCCCCC
T ss_conf 4566507653311302664504681069----999999999999987557556786-43337654331089987655687
Q ss_pred CCCCCHH
Q ss_conf 3443336
Q gi|254780445|r 639 GNVVFPE 645 (963)
Q Consensus 639 GNvi~p~ 645 (963)
T Consensus 207 ~n~I~L~ 213 (328)
T PRK12556 207 GNVIPLF 213 (328)
T ss_pred CCCCCCC
T ss_conf 8813476