HHsearch alignment for GI: 254780445 and conserved domain: PRK13804
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=2209.92 Aligned_cols=953 Identities=58% Similarity=1.049 Sum_probs=895.6
Q ss_pred CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 77576867601588899988899689779999999864761445405688884899628225588976215778566878
Q gi|254780445|r 3 SESKANYSGTLYLPRTDFPMRAKLPQKESELITYWQKIRLFDKIRESAVGRKNFTLHDGPPYANGHIHIGHALNKILKDV 82 (963)
Q Consensus 3 ~~~~~~y~~tl~lPkt~Fp~r~~~~~~E~~~~~~W~~~~~f~~~~~~~~~~~~f~l~dgPPy~nG~lH~GH~~n~~~kDi 82 (963)
T Consensus 3 ~~~~~~y~~tl~lp~t~fp~r~nl~~~E~~~~~~W~~~~~y~~~~~~~~~~~~f~~~dGPPyanG~lH~GHaln~tikDi 82 (966)
T PRK13804 3 TTEAMDYKKTLYLPQTAFPMRAGLPQKEPEIQARWEEIDLYKKLREQAKGRPKFVLHDGPPYANGNIHIGHALNKILKDV 82 (966)
T ss_pred CCCCCCHHHHCCCCCCCCCCCCCCHHHCHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 65667817511889999998888123269999998754899999985689997699579999999861225566689999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCE
Q ss_conf 99876708982678888244420899999998765599833489999999999999999999999999706077636981
Q gi|254780445|r 83 IVRSFQMRNFNACFVPGWDCHGLPIEWKVENEYLAKGKKKDDIPVNEFRQACRDSASAWVKIQSKEFQRLGIVGDFENPY 162 (963)
Q Consensus 83 ~~Ry~rm~G~~Vl~~~GwD~hGLPiE~~vek~l~~~~~~~~~~~~~~~~~~c~~~a~~~i~~~~~~~~rlG~~~Dw~~~y 162 (963)
T Consensus 83 i~Rykrm~G~~V~~~~GwD~hGLPiE~~vek~l~~~~~~~~~~~~~~f~~~cr~~a~~~i~~~~~q~~rlG~~~DW~~~y 162 (966)
T PRK13804 83 IVRSKQMLGFDANYVPGWDCHGLPIEWKIEEKYRAKGKNKDEVPLNEFRKECREYALSWIDVQREEFKRLGVIGDWENPY 162 (966)
T ss_pred HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCC
T ss_conf 99998748996689997688878999999997765289823389999999999999999999999999829202258984
Q ss_pred ECCCHHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCCCCHHHEEEEEECCEEEEEEEECCCCCC-CCCCCCCHHCC
Q ss_conf 15776798999999999998796110343022057435736500210132105779998330375311-22001100000
Q gi|254780445|r 163 TTMTRESEAQIASELLKIAESDQIYRGIKPIMWSIAEQTTLAEAEIEYHDVDSDSILVGFPVKSSADY-LIKSQIVIWTT 241 (963)
Q Consensus 163 ~T~dp~y~~~~~~~F~~l~~kGliyr~~~pV~w~p~~~T~La~~Evey~d~~~~s~~v~F~l~~~~~~-~~~~~~~iwTT 241 (963)
T Consensus 163 ~T~dp~y~~~~~~~F~~l~ekGliYr~~~pV~Wcp~~~TaLA~~EVey~d~~s~s~~v~f~v~~~~~~~~~~~~l~iwTT 242 (966)
T PRK13804 163 TTMDFHAEARIAREFMKFAAKGQLYRGSKPVMWSVVERTALAEAEVEYHDHESDTIWVKFPVKDGKGILLTGASVVIWTT 242 (966)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHCCCCEECCEEEEEEEECCCCCCCCCCCCEEEEEC
T ss_conf 22898999999999999998799884385147689888662367547667866669999873466200047870677507
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHCCC-CEEEEEECCCCCCCCCEEEECCCC
Q ss_conf 0578865445322776745899830665311112374355121118888876098-517841001111128575431378
Q gi|254780445|r 242 TPWTIPGNRAIAFSSNHQYGLYDVISCSGQHTFDTGKKLIISKNLAQSIANQTNV-KIALVCDVKAEDLSKTMCSHPLKK 320 (963)
Q Consensus 242 rP~Tl~~n~ai~v~p~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~~-~~~~~~~~~g~~l~g~~~~~Pl~~ 320 (963)
T Consensus 243 tPwTl~~n~avav~p~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~l~e~~~~~~~~~~~~~~~~~~G~~l~g~~~~~Pl~~ 322 (966)
T PRK13804 243 TPWTIPANRAISYSPDIEYGLYEVTGAENDNWAKPGEKLVVADALAESVAKKAGVESFERVRDVKADDLEAIVCAHPLKG 322 (966)
T ss_pred CCCHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCEEEEEEECCCEECCCEEECCCCC
T ss_conf 85022021020245776437899504542112445515665477899999873764227873001500047665266655
Q ss_pred C--CCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6--65125511443223322445405640578988989987605212210022034302344551024310017863211
Q gi|254780445|r 321 L--GYTFSVPLIDAEYVANDCGTGFVHVAPSHGVEDFTAWNEAKDILLNRSVDIKVPSPVDGRGFYTTEAPGFSGARVLD 398 (963)
Q Consensus 321 ~--~~~~~~pi~~~d~V~~~~GTG~Vh~aPahg~~Dy~~~~~~~~~~~~~~~~l~~~~~vd~~G~~~~~~~~~~G~~v~~ 398 (963)
T Consensus 323 ~~~~~~~~~pi~~~d~V~~~~GTG~Vh~aPaHg~~Dy~~~~k~~L~~~~---~~~i~~~vd~~G~~~~~~~~~~g~~v~~ 399 (966)
T PRK13804 323 LDGGYEFEVPVLDGDHVTDDAGTGFVHTAPGHGREDFEVWMKYGRELEV---RTAIPFTVDEDGFYTEDAPGFGGARVID 399 (966)
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCC---CCCCCCCCCCCCEECCCCCHHCCCCCCC
T ss_conf 5666671578981683156778563775577887889999983987310---3577875688760654560012554213
Q ss_pred C-CCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 3-554445675452356647982100000012211321013203333102366302245542368999987520000024
Q gi|254780445|r 399 D-AGEKGNANEVVIAALINACAILNRSIVKHSYPHSWRSKKPIIFRTTSQWFLHMDKKLGDGSTLRSRALSEVEKIRFFP 477 (963)
Q Consensus 399 ~-~~~~~~a~~~ii~~L~e~g~l~~~~~~~H~yP~cwR~~~pii~r~~~QWFi~~d~~~~~~~~~k~~~l~~i~~v~~~P 477 (963)
T Consensus 400 ~~G~~~~~a~~~Ii~~L~e~g~L~~~~~~~HsyP~~wR~~~Pvi~r~t~QWFi~~~~~~~~~~~lr~~~l~~i~~v~~~P 479 (966)
T PRK13804 400 DKGKKYGDANKAVIEALIEAGLLLARGRLKHSYPHSWRSKKPVIFRNTPQWFISMDKDLGDGGTLRSRALDAIKKTRFVP 479 (966)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 46873656279999999967996455641247763456786279960461478735343213899999998765435065
Q ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCHHCCC-CCCCCCCC
Q ss_conf 44343202443043200001123456722589825884732521124442122211887433564011146-88788755
Q gi|254780445|r 478 SSGKNRLRSMIENRPDWLLSRQRNWGVPICFFYNEKGEILLDKAINDRIIKTFKDQGSDAWFSEGSRDFFL-GDRASEPW 556 (963)
Q Consensus 478 ~~~k~r~~~~i~~~~DW~ISRqR~WG~PIPi~~~e~~~~~~~~~~~~~i~~~~~~~g~d~~~~~~~~~~~~-~~~~~~~~ 556 (963)
T Consensus 480 ~~~~~r~~~~l~~~~DW~ISRQRyWG~PIPi~~~e~~~~~~~~~~~~~i~~~~~~~g~d~w~~~~~~~~~~~~~~~~~~~ 559 (966)
T PRK13804 480 AAGQNRLRGMIEDRPDWVISRQRAWGVPIPVFVDENGEILMDDEVNERIADAFEEEGADAWFAEGAKERFLGGFHPGEEW 559 (966)
T ss_pred HHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHH
T ss_conf 34344555121578676663113458875179837997445756778999998761876333457476558887874550
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCHHC
Q ss_conf 45664210000333545433222223334431002554442111245544433117840000130378262134530000
Q gi|254780445|r 557 IQSKDILDVWFDSACTHTILLGKDPKLAWPADVYLEGSDQHRGWFQHSLLESCATRGSTPFTSLITHGFSVDENGEKMSK 636 (963)
Q Consensus 557 ~r~~DvlDvWfDSg~s~~~~~~~~~~~~~PaD~~~eG~Dq~RgWF~s~ll~~~~~~~~~Pfk~v~~hG~vld~~G~KMSK 636 (963)
T Consensus 560 ~r~~DvlD~WfdSgss~~~~~~~~~~~~~PaD~y~eG~Dq~rgWF~s~l~~s~~~~~~~Pfk~v~~hG~VlDe~G~KMSK 639 (966)
T PRK13804 560 TKVTDILDVWFDSGSTHAFVLEDRPDLPWPADLYLEGSDQHRGWFHSSLLESCGTRGRAPYKAVLTHGFTLDEKGEKMSK 639 (966)
T ss_pred EECCCHHHHHHHCCCCCCCCCCCHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEECCCCCCCCC
T ss_conf 74131144665157753201158544589741686254188869999998742206887745103411689889888878
Q ss_pred CCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCHHHHHHHHH
Q ss_conf 1234433366411367578878887178766554431025677764000001100000122444456-731011127888
Q gi|254780445|r 637 SKGNVVFPEEIISESGADVLRYWAVNSDYHDDQRLGKNIIQTNIDTYRKLRNTIRWMLGMLAHDTGN-EPSLADMPALEQ 715 (963)
Q Consensus 637 S~GNvi~p~~ii~~yGaD~lR~~~~~~~~~~d~~~~~~~l~~~~~~~~kl~Nt~rf~l~~l~~~~~~-~~~~~~l~~~Dk 715 (963)
T Consensus 640 S~GNvvdP~~ii~~yGADalRl~~as~~~~~d~~~~~~~l~~~~~~~~ki~Nt~rf~l~nl~~f~~~~~~~~~~l~~~D~ 719 (966)
T PRK13804 640 SLGNVVDPQDVIKQSGADILRLWVASVDYQDDQRIGKEILKTNAETYRKLRNTLRWMLGTLAHFDPGEAVAYADLPELER 719 (966)
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHH
T ss_conf 78898998999987292188899984775446345689999999999999999999998642798323489223528789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 75436899999988987654012266889987863024001010201222789980899999999999999999997000
Q gi|254780445|r 716 LMLHRLTELDQVVREAYDAFNFKEVVRQLTNFSNAELSSFYFDIRKDSLYCDSPSSLKRLSSIAVIRILCRHLIIWIAPI 795 (963)
Q Consensus 716 wiLskl~~~i~~v~~~~e~~~f~~a~~~i~~F~~~dLS~~Yld~~Kdrly~~~~~s~~R~s~~~~L~~il~~l~~lLaPi 795 (963)
T Consensus 720 wil~~l~~~~~~v~~~~~~Y~f~~a~~~l~~F~~~dLs~~Yle~~Kdrly~~~~~~~~rrsaq~~L~~il~~l~~llAPi 799 (966)
T PRK13804 720 LMLHRLNELDATVRKAYEAFDFKTIYKALVNFMTVDLSAFYFDIRKDALYCDAPSSLRRKAALTVIYEIFDRLTKWLAPI 799 (966)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999985113599999999999998787999988437540579983999999999999999999999767
Q ss_pred HHHHHHHHHHHCCC-CCCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHH
Q ss_conf 44899999986388-67734533588998356898999999999999999999999999738999744403899829689
Q gi|254780445|r 796 LPFTAEEAWLSLNP-EAVSVHLELFPIIPLEWQNACLSKKWGKILQLRKVVTSALEIERKAKHIGSSLETAPTLYITDSS 874 (963)
Q Consensus 796 ~P~~aEEiw~~l~~-~~~SI~~~~wP~~~~~~~d~~le~~~~~l~~ir~~V~~~le~~R~~k~I~~slea~v~i~~~d~~ 874 (963)
T Consensus 800 ~Pf~aEEiw~~~~~~~~~Sv~l~~~p~~~~~~~d~~l~~~w~~l~~lr~~V~~~lE~aR~~k~IgssLea~v~i~~~~~~ 879 (966)
T PRK13804 800 LPFTTEEAWLYRYPEEEVSVHLEQFPETPAFWRDDALAEKWRKFRAVRRVVTGALEIERAAKRIGSSLEAAPTVYISDPE 879 (966)
T ss_pred HHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHH
T ss_conf 28999999972557899876711489997210697999999999999999999999998769989733057999818689
Q ss_pred HHHHHCCCCHHHHEEECEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99772211365511204169963777533201236786289998178852852175467447885635303788999632
Q gi|254780445|r 875 LISNIEGENLAEICITSDITIVHSNGPTDAFRLSDVPNVSVQCLKAEGKKCARSWRVTKDVGLDASYPDVSARDAAVLHE 954 (963)
Q Consensus 875 ~l~~l~~~~L~~~~ivS~v~i~~~~~~~~~~~~~~~~~~~v~v~~a~~~KC~RCW~~~~~v~~~~~~~~lC~RC~~vl~~ 954 (963)
T Consensus 880 ~~~~l~~~~l~~~~ivS~v~l~~~~~~~~~~~~~~~~~~~v~v~~a~g~KC~RCW~~~~~v~~~~~~~~lC~RC~~vl~e 959 (966)
T PRK13804 880 LLAALEGLDFAEICITSQLTVAAAEAPADAFRLDEVEGVAVVVEKAEGEKCARSWRITPDVGSDPYYPDVSPRDAAALRE 959 (966)
T ss_pred HHHHHCCCCHHHHHEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 98652507086846661069965888533223456786499998489995832199985436898988758779999999
Q ss_pred CCCCC
Q ss_conf 69852
Q gi|254780445|r 955 LGYPK 959 (963)
Q Consensus 955 ~g~~~ 959 (963)
T Consensus 960 ~-~~~ 963 (966)
T PRK13804 960 W-KAL 963 (966)
T ss_pred H-HHC
T ss_conf 8-624