HHsearch alignment for GI: 254780445 and conserved domain: TIGR03447
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase. Members of this protein family are MshC, l-cysteine:1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase, an enzyme that uses ATP to ligate a Cys residue to a mycothiol precursor molecule, in the second to last step in mycothiol biosynthesis. This enzyme shows considerable homology to Cys--tRNA ligases, and many instances are misannotated as such. Mycothiol is found in Mycobacterium tuberculosis, Corynebacterium glutamicum, Streptomyces coelicolor, and various other members of the Actinobacteria. Mycothiol is an analog to glutathione.
Probab=99.86 E-value=1.9e-20 Score=159.72 Aligned_cols=137 Identities=23% Similarity=0.329 Sum_probs=102.7
Q ss_pred CCCCCCCCCCCCHHHHH---HHHHHHHCCCCCEEEEECCCC-CEECCCCCCHHCCCCCCCCHHHHHCC-CCHHHHHHHHH
Q ss_conf 31002554442111245---544433117840000130378-26213453000012344333664113-67578878887
Q gi|254780445|r 587 ADVYLEGSDQHRGWFQH---SLLESCATRGSTPFTSLITHG-FSVDENGEKMSKSKGNVVFPEEIISE-SGADVLRYWAV 661 (963)
Q Consensus 587 aD~~~eG~Dq~RgWF~s---~ll~~~~~~~~~Pfk~v~~hG-~vld~~G~KMSKS~GNvi~p~~ii~~-yGaD~lR~~~~ 661 (963)
T Consensus 242 ~DIHgGG~DL~---FPHHENEiAQsea~~g~~~~a~yWmH~g~l~-~~geKMSKSlGN~~ti~dl~~~g~~p~~iR~~lL 317 (411)
T TIGR03447 242 FDIQGGGSDLI---FPHHEFSAAHAEAATGVRRMARHYVHAGMIG-LDGEKMSKSLGNLVFVSKLRAAGVDPAAIRLGLL 317 (411)
T ss_pred EEEECCCCCCC---CCCCHHHHHHHHHHHCCCHHHHHHHECCEEE-ECCEECCCCCCCEEEHHHHHHCCCCHHHHHHHHH
T ss_conf 57878860357---8885309999998668873766765300231-2870556668872579999864998999999997
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q ss_conf 17876655443102567776400000110000012244445673101112788875436899999988987-65401226
Q gi|254780445|r 662 NSDYHDDQRLGKNIIQTNIDTYRKLRNTIRWMLGMLAHDTGNEPSLADMPALEQLMLHRLTELDQVVREAY-DAFNFKEV 740 (963)
Q Consensus 662 ~~~~~~d~~~~~~~l~~~~~~~~kl~Nt~rf~l~~l~~~~~~~~~~~~l~~~DkwiLskl~~~i~~v~~~~-e~~~f~~a 740 (963)
T Consensus 318 ~~HYRspl~fs~~~L~~A~~~l~r~~~a~~~-------~~~--~~--------------~~~~~~~~~~Al~DDlNTp~A 374 (411)
T TIGR03447 318 AGHYRQDRDWTDAVLAEAEARLARWRAALAA-------TDA--PD--------------ATDLIARLRQHLANDLDTPAA 374 (411)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC-------CCC--CC--------------HHHHHHHHHHHHHCCCCCHHH
T ss_conf 1448997688989999999999999998726-------677--52--------------267999999998601672999
Q ss_pred HHHHHHHHHH
Q ss_conf 6889987863
Q gi|254780445|r 741 VRQLTNFSNA 750 (963)
Q Consensus 741 ~~~i~~F~~~ 750 (963)
T Consensus 375 la~l~~~~~~ 384 (411)
T TIGR03447 375 LAAVDNWAAA 384 (411)
T ss_pred HHHHHHHHHH
T ss_conf 9999999999