HHsearch alignment for GI: 254780445 and conserved domain: pfam09334

>pfam09334 tRNA-synt_1g tRNA synthetases class I (M). This family includes methionyl tRNA synthetases.
Probab=100.00  E-value=0  Score=566.29  Aligned_cols=368  Identities=25%  Similarity=0.392  Sum_probs=276.9

Q ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHH
Q ss_conf             89962822558897621577856687899876708982678888244420899999998765599833489999999999
Q gi|254780445|r   56 FTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVPGWDCHGLPIEWKVENEYLAKGKKKDDIPVNEFRQACR  135 (963)
Q Consensus        56 f~l~dgPPy~nG~lH~GH~~n~~~kDi~~Ry~rm~G~~Vl~~~GwD~hGLPiE~~vek~l~~~~~~~~~~~~~~~~~~c~  135 (963)
T Consensus         1 ~~I~~ppP~~nG~lHiGHa~~~~~~Dvl~R~~r~~G~~V~~v~g~D~~g~~i~~ka~~~----g~-----~~-------~   64 (388)
T pfam09334         1 FLITTALPYVNGPPHIGHLYTTIPADVYARYLRLRGYDVLFVTGTDEHGTKIELAAEKE----GV-----TP-------Q   64 (388)
T ss_pred             CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHC----CC-----CH-------H
T ss_conf             98937898888860022418899999999999956997071386485379999999984----99-----99-------9


Q ss_pred             HHHHHHHHHHHHHHHHCCEEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCCCCHHHEEEEEEC
Q ss_conf             99999999999999970607763698115776798999999999998796110343022057435736500210132105
Q gi|254780445|r  136 DSASAWVKIQSKEFQRLGIVGDFENPYTTMTRESEAQIASELLKIAESDQIYRGIKPIMWSIAEQTTLAEAEIEYHDVDS  215 (963)
Q Consensus       136 ~~a~~~i~~~~~~~~rlG~~~Dw~~~y~T~dp~y~~~~~~~F~~l~~kGliyr~~~pV~w~p~~~T~La~~Evey~d~~~  215 (963)
T Consensus        65 e~~~~y~~~~~~~~~~lgi~--~D~~~~t~~~~~~~~v~~~f~~L~~~G~iy~~~~~~~y~~~~~~~l~d~~v~g---~c  139 (388)
T pfam09334        65 ELVDRYHEEFKELFKKFNIS--FDDFIRTTSERHKELVQEFFLKLYEKGDIYEGEYEGWYCVSDERFLPDRYVEG---TC  139 (388)
T ss_pred             HHHHHHHHHHHHHHHHHCCC--CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHCC---CC
T ss_conf             99999999999999983996--78786579846899999998751406815532411223666666665333075---45


Q ss_pred             CEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHCC
Q ss_conf             77999833037531122001100000057886544532277674589983066531111237435512111888887609
Q gi|254780445|r  216 DSILVGFPVKSSADYLIKSQIVIWTTTPWTIPGNRAIAFSSNHQYGLYDVISCSGQHTFDTGKKLIISKNLAQSIANQTN  295 (963)
Q Consensus       216 ~s~~v~F~l~~~~~~~~~~~~~iwTTrP~Tl~~n~ai~v~p~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~  295 (963)
                                                                                                      
T Consensus       140 --------------------------------------------------------------------------------  139 (388)
T pfam09334       140 --------------------------------------------------------------------------------  139 (388)
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCEEEEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCEEEE
Q ss_conf             85178410011111285754313786651255114432233224454056405789889899876052122100220343
Q gi|254780445|r  296 VKIALVCDVKAEDLSKTMCSHPLKKLGYTFSVPLIDAEYVANDCGTGFVHVAPSHGVEDFTAWNEAKDILLNRSVDIKVP  375 (963)
Q Consensus       296 ~~~~~~~~~~g~~l~g~~~~~Pl~~~~~~~~~pi~~~d~V~~~~GTG~Vh~aPahg~~Dy~~~~~~~~~~~~~~~~l~~~  375 (963)
T Consensus       140 ---------------------p-----------~~~--------------~~~~~~~~~---------------------  152 (388)
T pfam09334       140 ---------------------P-----------YCG--------------SEDARGDQC---------------------  152 (388)
T ss_pred             ---------------------C-----------CCC--------------CCCCCCCHH---------------------
T ss_conf             ---------------------7-----------557--------------501366410---------------------


Q ss_pred             ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCC
Q ss_conf             02344551024310017863211355444567545235664798210000001221132101320333310236630224
Q gi|254780445|r  376 SPVDGRGFYTTEAPGFSGARVLDDAGEKGNANEVVIAALINACAILNRSIVKHSYPHSWRSKKPIIFRTTSQWFLHMDKK  455 (963)
Q Consensus       376 ~~vd~~G~~~~~~~~~~G~~v~~~~~~~~~a~~~ii~~L~e~g~l~~~~~~~H~yP~cwR~~~pii~r~~~QWFi~~d~~  455 (963)
T Consensus       153 ----------e----~~G~~~---------------------------e~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~-  190 (388)
T pfam09334       153 ----------E----VCGRPL---------------------------EPTELINPRSAISGSTPELKEEEHYFFRLSK-  190 (388)
T ss_pred             ----------H----CCCCCC---------------------------CHHHHCCCCCCCCCCCCEEECCCCHHHHHHH-
T ss_conf             ----------0----238827---------------------------8677417644467997544324412330688-


Q ss_pred             CCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHC-CCCCCCCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHC
Q ss_conf             5542368999987520000-0244434320244304-3200001123456722589825884732521124442122211
Q gi|254780445|r  456 LGDGSTLRSRALSEVEKIR-FFPSSGKNRLRSMIEN-RPDWLLSRQRNWGVPICFFYNEKGEILLDKAINDRIIKTFKDQ  533 (963)
Q Consensus       456 ~~~~~~~k~~~l~~i~~v~-~~P~~~k~r~~~~i~~-~~DW~ISRqR~WG~PIPi~~~e~~~~~~~~~~~~~i~~~~~~~  533 (963)
T Consensus       191 ------~~~~l~~~~~~~~~~~~~~~~~~~~~wl~~~l~Dw~ISR~~~WG~~iP~---~~~~------------------  243 (388)
T pfam09334       191 ------FQDKLLEWIKENPDEPPSNVNEVVLSWLKEGLKDLSITRDLDWGIPVPG---DPGK------------------  243 (388)
T ss_pred             ------HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---CCCE------------------
T ss_conf             ------9999999995499889889999999998668887644124778750488---8980------------------


Q ss_pred             CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCC-----CCCCCCCCCCCHHHH
Q ss_conf             8874335640111468878875545664210000333545433------22222333443-----100255444211124
Q gi|254780445|r  534 GSDAWFSEGSRDFFLGDRASEPWIQSKDILDVWFDSACTHTIL------LGKDPKLAWPA-----DVYLEGSDQHRGWFQ  602 (963)
Q Consensus       534 g~d~~~~~~~~~~~~~~~~~~~~~r~~DvlDvWfDSg~s~~~~------~~~~~~~~~Pa-----D~~~eG~Dq~RgWF~  602 (963)
T Consensus       244 ----------------------------~~~vW~da~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~G~Di~~--fh  293 (388)
T pfam09334       244 ----------------------------VIYVWFDALIGYISATKYLSGNPEKWKKFWADDPDTEIVHFIGKDIIR--FH  293 (388)
T ss_pred             ----------------------------EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCC--HH
T ss_conf             ----------------------------687723565552000277777817888644367762000106764142--01


Q ss_pred             HHHHHHHHC-CCCCEEEEECCCCCEECCCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHHH-CCCCCCCCCCCHHHHHHH
Q ss_conf             554443311-784000013037826213453000012344333664113675788788871-787665544310256777
Q gi|254780445|r  603 HSLLESCAT-RGSTPFTSLITHGFSVDENGEKMSKSKGNVVFPEEIISESGADVLRYWAVN-SDYHDDQRLGKNIIQTNI  680 (963)
Q Consensus       603 s~ll~~~~~-~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvi~p~~ii~~yGaD~lR~~~~~-~~~~~d~~~~~~~l~~~~  680 (963)
T Consensus       294 ~~~~~a~~~~~~~~~~~~~~~~g~v~~-~G~KMSKSlGN~i~~~d~i~~ygaDalR~~L~~~~~~~~d~~Fs~~~~~~~~  372 (388)
T pfam09334       294 AIYWPAMLMAAGLPLPTQVFAHGWLTV-EGGKMSKSRGNVVDPDELLDRYGVDALRYYLAREAPEGKDGDFSWEDFVERV  372 (388)
T ss_pred             HHHHHHHHHHCCCCCCCEEEEEEEEEE-CCEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf             789999998389998866787579975-9944478699878889999887828999999953999899989999999998


Q ss_pred             H--HHHHHCC-CCC
Q ss_conf             6--4000001-100
Q gi|254780445|r  681 D--TYRKLRN-TIR  691 (963)
Q Consensus       681 ~--~~~kl~N-t~r  691 (963)
T Consensus       373 n~~~~~kl~N~~~r  386 (388)
T pfam09334       373 NSELANDLGNLVNR  386 (388)
T ss_pred             HHHHHHHHHHHHHC
T ss_conf             79988877657733