RPSBLAST alignment for GI: 254780445 and conserved domain: TIGR00396
>gnl|CDD|161857 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family. The leucyl-tRNA synthetases belong to two families so broadly different that they are represented by separate models. This model includes both eubacterial and mitochondrial leucyl-tRNA synthetases. It generates higher scores for some valyl-tRNA synthetases than for any archaeal or eukaryotic cytosolic leucyl-tRNA synthetase. Note that the enzyme from Aquifex aeolicus is split into alpha and beta chains; neither chain is long enough to score above the trusted cutoff, but the alpha chain scores well above the noise cutoff. The beta chain must be found by a model and search designed for partial length matches. Length = 842
Score = 54.4 bits (131), Expect = 1e-07
Identities = 92/468 (19%), Positives = 151/468 (32%), Gaps = 124/468 (26%)
Query: 493 DWLLSRQRNWGVPICFFYNEKGEILLDKAINDRIIKTFKDQGSDA-WFSEGSRD----FF 547
DWL SRQR WG PI + E G + D + + D S SR
Sbjct: 413 DWLFSRQRYWGEPIPIIHCEDGGA-VPVPEEDLPVILPELVNYDPDGNSPLSRIQEWVNV 471
Query: 548 LGDRASEPWIQSKDILDVWFDS-------ACTHTILLGKDPKLA--W-PADVYLEGSDQ- 596
+P ++ D +D + S D + A W P D+Y+ G++
Sbjct: 472 TCPSCGKPALRETDTMDTFAGSSWYYLRYLDPKNTDQPFDKEKAEYWLPVDLYIGGAEHA 531
Query: 597 --H----RGWFQHSLLESC-ATRGSTPFTSLITHG----FSVDENGE------------- 632
H R W H L PF LI G F NG+
Sbjct: 532 ILHLLYARFW--HKFLYDIGYVSTKEPFKKLINQGMVLGFYYPPNGKSPPDELTERDEKA 589
Query: 633 --------------KMSKSKGNVVFPEEIISESGADVLRYW-------AVNSDYHDDQRL 671
KMSKSKGN + P+EI+ + GAD LR + A + +++D
Sbjct: 590 KDKSGGELVVVGYEKMSKSKGNGIDPQEIVKKHGADALRLYIMFMGPIAASLEWNDSGLE 649
Query: 672 GKNIIQTNIDTYRKLRNTIRWM--LGMLAHDTGNEPSLADMPALEQL-----MLHRLTEL 724
G R++ + L ++ E L L R ++
Sbjct: 650 GAR----------------RFLDRVWNLFYNILGELDGKTYLTPTILEEAQKELRR--DV 691
Query: 725 DQVVREAYDAFN----FKEVVRQLTNFSNAELSSFYFDIRKDSLYCDSPSSLKRLSSIAV 780
+ +++ + F + + NA + +KD+LY +
Sbjct: 692 HKFLKKVTEDLEKLESFNTAISAMMILLNALYKA-----KKDALYLEYLK--------GF 738
Query: 781 IRILCRHLIIWIAPILPFTAEEAWLSLNPEAVSVHLELFPIIPLEWQNACLSKKWGKI-L 839
+ +L +P P AEE W L E + +P + L + I L
Sbjct: 739 LTVL--------SPFAPHLAEELWEKLGSEPFIIKQAKWPKV----DETALVEDKVTIVL 786
Query: 840 QLRKVVTSALEIERKAKHIGSSLETAPTLYITDSSLISNIEGENLAEI 887
Q+ + + + E L D + +E + + ++
Sbjct: 787 QVNGKFKAKKTVP-----KDADEEQVEELAKQDPEVKKYLENKTIKKV 829