RPSBLAST alignment for GI: 254780445 and conserved domain: TIGR00396
>gnl|CDD|161857 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family. The leucyl-tRNA synthetases belong to two families so broadly different that they are represented by separate models. This model includes both eubacterial and mitochondrial leucyl-tRNA synthetases. It generates higher scores for some valyl-tRNA synthetases than for any archaeal or eukaryotic cytosolic leucyl-tRNA synthetase. Note that the enzyme from Aquifex aeolicus is split into alpha and beta chains; neither chain is long enough to score above the trusted cutoff, but the alpha chain scores well above the noise cutoff. The beta chain must be found by a model and search designed for partial length matches. Length = 842
Score = 49.0 bits (117), Expect = 6e-06
Identities = 78/382 (20%), Positives = 125/382 (32%), Gaps = 93/382 (24%)
Query: 30 ESELITYWQKIRLFDKIRESAVGRKNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQM 89
E + W++ ++F +S + + + D PY +G +H+GH N + DV+ R ++M
Sbjct: 7 EEKWQQKWKENKVFKFTDDS--NKPKYYILDMFPYPSGALHMGHVRNYTITDVLSRYYRM 64
Query: 90 RNFNACFVPGWDCHGLPIE-WKVENEYLAKGKKKDDIPVNEFRQACRDSASAWVKIQSKE 148
+ +N GWD GLP E ++ ++I + K+
Sbjct: 65 KGYNVLHPMGWDAFGLPAENAAIKRGIHPAKWTYENI--ANMK---------------KQ 107
Query: 149 FQRLGIVGDFENPYTTMTRES---EAQIASELLKIAESDQIYRGIKPIMWSIAEQTTLAE 205
Q LG D++ T E I EL E Y + W + T LA
Sbjct: 108 LQALGFSYDWDREIATCDPEYYKWTQWIFLELF---EKGLAYVKEADVNWCPNDGTVLAN 164
Query: 206 AEIEYHDVDSDSILVGFPV----------------------------------------- 224
++ D D S G PV
Sbjct: 165 EQV---DSDGRSWRGGTPVEKKELKQWFLKITAYAEELLNDLEELDHWPESVKEMQRNWI 221
Query: 225 -KSSADYLI------KSQIVIWTTTPWTIPGNRAIAFSSNHQYGLYDVISCSGQHTFDTG 277
KS + K +I ++TT P TI G +A + H + +
Sbjct: 222 GKSEGVEITFKIADHKEKIAVFTTRPDTIFGVTYLALAPEHPL---------VEKIAENN 272
Query: 278 KKLIISKNLAQSIANQTNVKIALVCDVKAEDLSKTMCSHPLKKLGYTFSVPLIDAEYVAN 337
K+ + I +T + +K + HPL +P+ A YV
Sbjct: 273 PKV---AAFIKKILQKTTTERTKETKLKKGVFTGIKAIHPLTGE----KIPIWVANYVLA 325
Query: 338 DCGTGFVHVAPSHGVEDFTAWN 359
GTG V P+H DF
Sbjct: 326 SYGTGAVMGVPAHDERDFEFAQ 347